# terms

id: PR:Q9P7Z3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methyltransferase-like protein 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02530","PANTHER:PTHR12843:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-lysine N-methyltransferase efm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.14c","secondary_identifiers":["UniProtKB:Q9P7Z3"],"synonyms":[{"name":"Spom972h-METTL10","type":"exact"},{"name":"elongation factor methyltransferase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"secretion and early endocytosis protein 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7Z3"}


id: MONDO:0006497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders affecting the development of movement and posture, often accompanied by disturbances of sensation, perception, cognition, and behavior. It results from damage to the fetal or infant brain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neurodegenerative disease","termid":"MONDO:0005559"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"},{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral palsy","secondary_identifiers":["HP:0100021","CSP:0723-4729","EFO:1000632","ICD10CM:G80","ICD9:343.8","ICD9:343.9","icd11.foundation:76906748","MEDGEN:854","MESH:D002547","NCIT:C34460","DOID:1969","SCTID:128188000","UMLS:C0007789"],"synonyms":[{"name":"infantile cerebral palsy","type":"exact"}],"termid":"MONDO:0006497","xrefs":{"Monarch":{"xref_id":"0006497"}}}


id: GO:0070301
data:
  {"annotated_genes":["SJAG_01216","SJAG_04823","SJAG_01199","SJAG_00141","SJAG_04953","SJAG_02515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97058,120300,119359,101884,106965,110781],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["CHEBI:16240","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"},{"relation_name":"is_a","term_name":"response to hydrogen peroxide","termid":"GO:0042542"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hydrogen peroxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070301","terms_by_termid":{"GO:0061692":null}}


id: PBO:0064320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 2","termid":"PBO:0064320"}


id: GO:0021717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the inferior olivary nucleus to attain its fully functional state. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","ISBN:0838580343","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"medulla oblongata maturation","termid":"GO:0021582"},{"relation_name":"part_of","term_name":"inferior olivary nucleus development","termid":"GO:0021713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus maturation","synonyms":[{"name":"inferior olive maturation","type":"related"}],"termid":"GO:0021717"}


id: PBO:0028919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription","termid":"PBO:0028919"}


id: MONDO:0016553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital hypogonadotropic hypogonadism that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital hypogonadotropic hypogonadism","secondary_identifiers":["UMLS:C5679849","GARD:20643","ICD10CM:E23.0","MEDGEN:1842176","Orphanet:238666"],"synonyms":[{"name":"nonsyndromic congenital hypogonadotropic hypogonadism","type":"exact"}],"termid":"MONDO:0016553","xrefs":{"Monarch":{"xref_id":"0016553"}}}


id: GO:0003105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glomerular filtration. Glomerular filtration is the process whereby blood is filtered by the glomerulus into the renal tubule.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular filtration","termid":"GO:0003093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"glomerular filtration","termid":"GO:0003094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glomerular filtration","termid":"GO:0003105"}


id: MONDO:0020299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia type 15/16 (obsolete MONDO:0020299)","termid":"MONDO:0020299","xrefs":{"Monarch":{"xref_id":"0020299"}}}


id: GO:0099403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome along the length of the telomeric region is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["GOC:dos","GOC:rph","PMID:26373281","GOC:BHF_telomere","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of mitotic sister chromatid cohesion","termid":"GO:0034088"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion, telomeric","termid":"GO:0099404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:0099403"}


id: CHEBI:600520
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micafungin","termid":"CHEBI:600520"}


id: PBO:0040768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3 pseudogene 3","termid":"PBO:0040768"}


id: FYPO:0001586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell tip during vegetative growth","synonyms":[{"name":"decreased protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell end during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0001586"}


id: PBO:0026745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_glucose_starvation","termid":"PBO:0026745"}


id: GO:2000692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of seed maturation","termid":"GO:2000034"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of seed maturation","termid":"GO:2000692"}


id: GO:0047708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biotin amide + H2O = biotin + NH3.","definition_xrefs":["MetaCyc:BIOTINIDASE-RXN","EC:3.5.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"biotinidase activity","secondary_identifiers":["Reactome:R-HSA-3076905","Reactome:R-HSA-4225086","Reactome:R-HSA-4167509","RHEA:13081","Reactome:R-HSA-3325540"],"synonyms":[{"name":"amidohydrolase biotinidase activity","type":"related"},{"name":"biotin-amide amidohydrolase activity","type":"related"}],"termid":"GO:0047708"}


id: MONDO:0026724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paganini-Miozzo syndrome","secondary_identifiers":["UMLS:C5193010","MEDGEN:1683361","DOID:0111843","OMIM:301025"],"synonyms":[{"name":"MRXSPM","type":"related"},{"name":"PAGANINI-MIOZZO SYNDROME","type":"related"},{"name":"Paganini-Miozzo syndrome, X-linked recessive","type":"exact"},{"name":"mental retardation, X-Linked, syndromic, Paganini-Miozzo type","type":"exact"}],"termid":"MONDO:0026724","xrefs":{"Monarch":{"xref_id":"0026724"}}}


id: PBO:0005526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn6 (predicted)","termid":"PBO:0005526"}


id: GO:2001078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (1->6)-beta-D-glucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan binding","synonyms":[{"name":"(1,6)-beta-D-glucan binding","type":"exact"},{"name":"1,6-beta-D-glucan binding","type":"exact"},{"name":"1->6-beta-D-glucan binding","type":"exact"},{"name":"beta-(1,6)-D-glucan binding","type":"exact"},{"name":"beta-(1->6)-D-glucan binding","type":"exact"},{"name":"beta-1,6-D-glucan binding","type":"exact"},{"name":"beta-1->6-D-glucan binding","type":"exact"}],"termid":"GO:2001078"}


id: PBO:0091211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit ribosomal RNA","termid":"PBO:0091211"}


id: MOD:01660
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonate, Uniblue A, to form Uniblue A cysteine adduct.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"Uniblue A derivatized residue","termid":"MOD:01659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Uniblue A derivatized cysteine","synonyms":[{"name":"1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonate","type":"exact"},{"name":"1-amino-9,10-dioxo-4-{[3-(vinylsulfonyl)phenyl]amino}-9,10-dihydroanthracene-2-sulfonate","type":"exact"},{"name":"SUniblueACys","type":"exact"},{"name":"Uniblue A","type":"exact"}],"termid":"MOD:01660"}


id: GO:0106073
data:
  {"annotated_genes":["SJAG_03764"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70712],"is_not":false,"summary":null,"term":"GO:0106073"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of the third glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation; the transfer of glucose from dolichyl phosphate glucose (Dol-P-Glc) on to the lipid-linked oligosaccharide Glc(2)Man(9)GlcNAc(2)-PP-Dol.","definition_xrefs":["PMID:9597543","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03764":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.4.1.256","RHEA:29543"],"termid":"GO:0106073","terms_by_termid":{"GO:0106073":null}}


id: PR:Q9UUI9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22F8.03c gene.","definition_xrefs":["UniProtKB:Q9UUI9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22F8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.03c","synonyms":[{"name":"Spom972h-SPAC22F8.03c","type":"exact"}],"termid":"PR:Q9UUI9"}


id: MONDO:0009079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"DOORS syndrome (also known as DOOR syndrome) is a multiple congenital anomalies-intellectual disability syndrome characterized by sensorineural hearing loss (deafness), onychodystrophy, osteodystrophy, mild to profound intellectual disability, and seizures. Isolated seizure disorders and isolated hearing loss have also been reported in individuals as a proposed spectrum of DOORS syndrome.","definition_xrefs":["PMID:24729539","PMID:25557349","PMID:24291220","Orphanet:79500","PMID:24729547","PMID:25769375","PMID:26371875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOORS syndrome","secondary_identifiers":["OMIM:220500","MEDGEN:208648","GARD:1685","SCTID:719800009","UMLS:C0795934","DOID:0111627","MESH:C563052"],"synonyms":[{"name":"DOORS","type":"related"},{"name":"DOORS syndrome","type":"exact"},{"name":"Digitorenocerebral syndrome","type":"related"},{"name":"Eronen syndrome","type":"related"},{"name":"autosomal recessive deafness-onychodystrophy syndrome","type":"exact"},{"name":"brachydactyly due to absence of distal phalanges","type":"related"},{"name":"deafness onychodystrophy osteodystrophy and intellectual disability syndrome","type":"related"},{"name":"deafness onychodystrophy osteodystrophy and mental retardation syndrome","type":"related"},{"name":"deafness, onychodystrophy, osteodystrophy, intellectual disability, and seizures syndrome","type":"related"},{"name":"deafness, onychodystrophy, osteodystrophy, mental retardation, and seizures syndrome","type":"related"},{"name":"deafness-onychodystrophy-osteodystrophy-intellectual disability syndrome","type":"exact"},{"name":"deafness-onychodystrophy-osteodystrophy-intellectual disability-seizures syndrome","type":"exact"},{"name":"deafness-onychoosteodystrophy-intellectual disability syndrome","type":"exact"},{"name":"door syndrome","type":"exact"},{"name":"drc syndrome","type":"related"}],"termid":"MONDO:0009079","xrefs":{"Monarch":{"xref_id":"0009079"}}}


id: PR:O42866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbonyl reductase family member 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01330","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.02","secondary_identifiers":["UniProtKB:O42866"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CBR4","type":"exact"}],"termid":"PR:O42866"}


id: PBO:0060836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-MDP1 readthrough","termid":"PBO:0060836"}


id: GO:0045774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of beta 2 integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta 2 integrin biosynthetic process","termid":"GO:0045115"},{"relation_name":"is_a","term_name":"negative regulation of integrin biosynthetic process","termid":"GO:0045720"},{"relation_name":"negatively_regulates","term_name":"beta 2 integrin biosynthetic process","termid":"GO:0045114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of beta 2 integrin biosynthetic process","synonyms":[{"name":"down regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"down-regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"downregulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"inhibition of beta 2 integrin biosynthetic process","type":"narrow"},{"name":"negative regulation of beta 2 integrin anabolism","type":"exact"},{"name":"negative regulation of beta 2 integrin biosynthesis","type":"exact"},{"name":"negative regulation of beta 2 integrin formation","type":"exact"},{"name":"negative regulation of beta 2 integrin synthesis","type":"exact"}],"termid":"GO:0045774"}


id: GO:1905713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mitochondrial calcium uptake that is involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:26644474"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial calcium uptake involved in regulation of presynaptic cytosolic calcium ion concentration (obsolete GO:1905713)","synonyms":[{"name":"calcium ion transmembrane import into mitochondrion involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium ion transmembrane import into mitochondrion involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"mitochondrial calcium uptake involved in regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:1905713"}


id: MONDO:0003079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized tumor composed of sheets of mast cells without atypia. It includes the cutaneous mastocytoma which involves the dermis and subcutaneous tissue, and the extracutaneous mastocytoma. Most cases of extracutaneous mastocytoma have been reported in the lung.","definition_xrefs":["NCIT:C9303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mast cell neoplasm","termid":"MONDO:0002724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"mastocytoma","secondary_identifiers":["UMLS:C0024897","ICD9:238.5","ICDO:9740/1","MESH:D034801","SCTID:404171008","MEDGEN:6237"],"synonyms":[{"name":"mastocytoma","type":"exact"}],"termid":"MONDO:0003079","xrefs":{"Monarch":{"xref_id":"0003079"}}}


id: GO:0035160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that tracheal tubes in an open tracheal system maintain their epithelial structure during the cell shape changes and movements that occur during the branching process.","definition_xrefs":["PMID:14681183","PMID:10694415","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial structure maintenance","termid":"GO:0010669"},{"relation_name":"is_a","term_name":"regulation of tube architecture, open tracheal system","termid":"GO:0035152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of epithelial integrity, open tracheal system","synonyms":[{"name":"maintenance of tracheal epithelial integrity","type":"exact"}],"termid":"GO:0035160"}


id: GO:1904496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substance P secretion, neurotransmission.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"positive regulation of substance P secretion","termid":"GO:1904460"},{"relation_name":"is_a","term_name":"regulation of substance P secretion, neurotransmission","termid":"GO:1904494"},{"relation_name":"positively_regulates","term_name":"substance P secretion, neurotransmission","termid":"GO:1990793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of substance P secretion, neurotransmission","synonyms":[{"name":"activation of substance P secretion, neurotransmission","type":"narrow"},{"name":"up regulation of substance P secretion, neurotransmission","type":"exact"},{"name":"up-regulation of substance P secretion, neurotransmission","type":"exact"},{"name":"upregulation of substance P secretion, neurotransmission","type":"exact"}],"termid":"GO:1904496"}


id: GO:0004693
data:
  {"annotated_genes":["SJAG_03421","SJAG_03061","SJAG_00150","SJAG_01000","SJAG_01825","SJAG_03967","SJAG_03048","SJAG_00342"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73297,77986,80188,81232,81345,81882,97667,107618],"is_not":false,"summary":null,"term":"GO:0004693"}]},"cv_name":"molecular_function","definition":"Cyclin-dependent catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["GOC:pr","PMID:7877684","GOC:rn","PMID:9841670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase activity","termid":"GO:0097472"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01000":null,"SJAG_01825":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0140096","GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2468287","Reactome:R-HSA-2468293","Reactome:R-HSA-2990882","Reactome:R-HSA-9009282","Reactome:R-HSA-4086410","Reactome:R-HSA-2220971","Reactome:R-HSA-174122","Reactome:R-HSA-69005","Reactome:R-HSA-69754","Reactome:R-HSA-68944","Reactome:R-HSA-180047","Reactome:R-HSA-174251","Reactome:R-HSA-187948","Reactome:R-HSA-174132","Reactome:R-HSA-187959","Reactome:R-HSA-174079","Reactome:R-HSA-2984220","Reactome:R-HSA-69756","Reactome:R-HSA-4088024","Reactome:R-HSA-1912391","Reactome:R-HSA-1226094","Reactome:R-HSA-380278","Reactome:R-HSA-2245218","Reactome:R-HSA-6793661","Reactome:R-HSA-5244669","Reactome:R-HSA-2514854","Reactome:R-HSA-69227","GO:0016537","EC:2.7.11.22","Reactome:R-HSA-1226095","Reactome:R-HSA-188390","Reactome:R-HSA-2294600","Reactome:R-HSA-3788705","Reactome:R-HSA-9008412","Reactome:R-HSA-9624800","Reactome:R-HSA-2430533","Reactome:R-HSA-5692755","Reactome:R-HSA-9686521","Reactome:R-HSA-6797606","Reactome:R-HSA-187520","Reactome:R-HSA-2172183","Reactome:R-HSA-5195402","Reactome:R-HSA-6805109","Reactome:R-HSA-187916"],"synonyms":[{"name":"ATP:cyclin phosphotransferase activity","type":"related"},{"name":"CDK","type":"related"},{"name":"CDK activity","type":"exact"},{"name":"CDK, catalytic subunit activity","type":"exact"},{"name":"Cdk-activating protein kinase activity","type":"related"},{"name":"D-type cyclin kinase activity","type":"narrow"},{"name":"cdc2 kinase activity","type":"narrow"},{"name":"cdk-activating kinase activity","type":"related"},{"name":"cyclin D-cdk6 kinase activity","type":"narrow"},{"name":"cyclin D-dependent kinase activity","type":"narrow"},{"name":"cyclin E kinase activity","type":"narrow"},{"name":"cyclin-A associated kinase activity","type":"narrow"},{"name":"cyclin-dependent kinase 6 activity","type":"narrow"},{"name":"cyclin-dependent kinase activity","type":"broad"},{"name":"cyclin-dependent kinase-2 activity","type":"narrow"},{"name":"cyclin-dependent kinase-4 activity","type":"narrow"},{"name":"cyclin-dependent protein kinase activity","type":"broad"},{"name":"cyclin-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"neuronal cdc2-like kinase activity","type":"narrow"}],"termid":"GO:0004693","terms_by_termid":{"GO:0004693":null}}


id: PBO:0086858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA exonuclease; possibly involved in pre-rRNA processing and ribosome assembly","termid":"PBO:0086858"}


id: PBO:0002701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Caf16 (predicted)","termid":"PBO:0002701"}


id: MONDO:0009716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Richieri Costa-da Silva syndrome","secondary_identifiers":["MEDGEN:419686","GARD:4709","UMLS:C2930978","Orphanet:3101","OMIM:255710","MESH:C535675"],"synonyms":[{"name":"Richieri Costa Da Silva syndrome","type":"related"},{"name":"myotonia with skeletal abnormalities and intellectual disability","type":"related"},{"name":"myotonia with skeletal abnormalities and mental retardation","type":"related"},{"name":"myotonia-intellectual disability-skeletal anomalies syndrome","type":"exact"}],"termid":"MONDO:0009716","xrefs":{"Monarch":{"xref_id":"0009716"}}}


id: FYPO:0004841
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus","termid":"FYPO:0003453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to nucleus during glucose starvation","synonyms":[{"name":"ectopic protein localization to nucleus during glucose starvation","type":"exact"},{"name":"protein mislocalised to nucleus during glucose starvation","type":"exact"},{"name":"protein mislocalized to nucleus during cellular response to glucose starvation","type":"exact"},{"name":"protein mislocalized to nucleus during glucose depletion","type":"exact"},{"name":"protein mislocalized to nucleus during glucose deprivation","type":"exact"},{"name":"protein mislocalized to nucleus during glucose limitation","type":"related"}],"termid":"FYPO:0004841"}


id: PBO:0057653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1245b","termid":"PBO:0057653"}


id: PBO:0072550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pseudouridine synthase domain containing 2","termid":"PBO:0072550"}


id: GO:0043190
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter.","definition_xrefs":["PMID:11421269","GOC:jl","GOC:mtg_sensu","PMID:15111107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase dependent transmembrane transport complex","termid":"GO:0098533"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter complex","secondary_identifiers":["GO:0043192","GO:0043191"],"synonyms":[{"name":"ABC-type efflux permease complex","type":"narrow"},{"name":"ABC-type efflux porter complex","type":"narrow"},{"name":"ABC-type uptake permease complex","type":"narrow"},{"name":"mating pheromone exporter","type":"narrow"}],"termid":"GO:0043190"}


id: GO:0051816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The production of structures and/or molecules in an organism that are required for the acquisition and/or utilization of nutrients obtained from a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete acquisition of nutrients from other organism during symbiotic interaction (obsolete GO:0051816)","termid":"GO:0051816"}


id: PBO:0061460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOTCH regulated ankyrin repeat protein","termid":"PBO:0061460"}


id: PBO:0113283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of major facilitator superfamily; member of 12-spanner drug:H(+) antiporter DHA1 family; specific for spermine; localizes to plasma membrane; targeted to vacuole via AP-3 pathway; TPO3 has a paralog, TPO2, that arose from the whole genome duplication","termid":"PBO:0113283"}


id: MONDO:0012279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital muscular dystrophy merosin-positive (obsolete MONDO:0012279)","termid":"MONDO:0012279","xrefs":{"Monarch":{"xref_id":"0012279"}}}


id: PBO:0068279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASEH1 divergent transcript","termid":"PBO:0068279"}


id: PBO:0055906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 30","termid":"PBO:0055906"}


id: GO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lactose + H2O = D-glucose + D-galactose.","definition_xrefs":["PMID:12023280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lactase activity","secondary_identifiers":["MetaCyc:BETAGALACTOSID-RXN","EC:3.2.1.108","Reactome:R-HSA-189062","RHEA:10076","Reactome:R-HSA-5658001"],"synonyms":[{"name":"lactose galactohydrolase activity","type":"exact"}],"termid":"GO:0000016"}


id: GO:0060609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the hollowing out of an epithelial rod or cord to form the central hole in a tube.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"tube lumen cavitation","termid":"GO:0060605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in tube lumen cavitation","synonyms":[{"name":"apoptosis involved in tube lumen cavitation","type":"narrow"}],"termid":"GO:0060609"}


id: GO:1903044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a membrane raft.","definition_xrefs":["GOC:TermGenie","PMID:19414744","GO_REF:0000087","GOC:dl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to membrane raft","synonyms":[{"name":"protein localisation in membrane raft","type":"exact"},{"name":"protein localisation to membrane raft","type":"exact"},{"name":"protein localization in membrane raft","type":"exact"}],"termid":"GO:1903044"}


id: PBO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital sideroblastic anemia","termid":"PBO:0036300"}


id: GO:0034809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene-cis-4,5-dihydrodiol = 4,5-dihydroxybenzo(a)pyrene + H2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene-cis-4,5-dihydrodiol dehydrogenase activity (obsolete GO:0034809)","termid":"GO:0034809"}


id: PBO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox transcription factor Phx1","termid":"PBO:0001555"}


id: PBO:0088483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron biosynthesis protein Sib3","termid":"PBO:0088483"}


id: PBO:0080582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR5B divergent transcript","termid":"PBO:0080582"}


id: MONDO:0100471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally low level of 25-hydroxyvitamin D in the blood.","definition_xrefs":["NCIT:C114830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin deficiency disorder","termid":"MONDO:0024298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D deficiency","secondary_identifiers":["HP:0100512","UMLS:C0042870","MEDGEN:12114","ICD10CM:E55","MESH:D014808","DOID:10574","ICD9:268","SCTID:34713006","icd11.foundation:2080031371"],"synonyms":[{"name":"DEFIC VITAMIN D","type":"exact"},{"name":"VITAMIN D DEFIC","type":"exact"},{"name":"avitaminosis D","type":"exact"},{"name":"avitaminosis D, NOS","type":"exact"},{"name":"deficiencies, vitamin D","type":"exact"},{"name":"deficiency of vitamin D (disorder)","type":"exact"},{"name":"deficiency, vitamin D","type":"exact"},{"name":"vitamin D deficiencies","type":"exact"},{"name":"vitamin D deficiency (disorder)","type":"exact"},{"name":"vitamin D deficiency, NOS","type":"exact"},{"name":"vitamin D insufficiency","type":"exact"}],"termid":"MONDO:0100471","xrefs":{"Monarch":{"xref_id":"0100471"}}}


id: PBO:0080177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 12","termid":"PBO:0080177"}


id: SO:0001070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region of polypeptide with a given structural property.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_structural_region","secondary_identifiers":["BS:00337"],"synonyms":[{"name":"polypeptide structural region","type":"exact"},{"name":"structural_region","type":"related"}],"termid":"SO:0001070"}


id: GO:2001033
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104262],"is_not":false,"summary":null,"term":"GO:2001033"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of double-strand break repair","termid":"GO:2000780"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair via nonhomologous end joining","termid":"GO:2001032"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"negative regulation of double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of NHEJ","type":"exact"}],"termid":"GO:2001033","terms_by_termid":{"GO:2001033":null}}


id: PBO:0028221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_snRNA_splicing","termid":"PBO:0028221"}


id: GO:1900146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry.","definition_xrefs":["GOC:vk","GOC:signaling","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:1900146)","synonyms":[{"name":"down regulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"down-regulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"downregulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"inhibition of nodal signaling pathway involved in determination of left/right asymmetry","type":"narrow"},{"name":"negative regulation of nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"}],"termid":"GO:1900146"}


id: PBO:0081430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 284","termid":"PBO:0081430"}


id: PBO:0075541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E21","termid":"PBO:0075541"}


id: FYPO:0005482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an inositol phosphate phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal inositol phosphate phosphatase activity","termid":"FYPO:0005482"}


id: GO:0035924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vascular endothelial growth factor stimulus.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:18440775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vascular endothelial growth factor stimulus","synonyms":[{"name":"cellular response to VEGF","type":"exact"},{"name":"cellular response to VEGFA","type":"narrow"},{"name":"cellular response to VEGFB","type":"narrow"},{"name":"cellular response to vascular endothelial growth factor","type":"exact"}],"termid":"GO:0035924"}


id: PBO:0050797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 5B, pseudogene","termid":"PBO:0050797"}


id: MONDO:0017270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal ichthyosis syndrome (obsolete MONDO:0017270)","secondary_identifiers":["Orphanet:281217"],"termid":"MONDO:0017270","xrefs":{"Monarch":{"xref_id":"0017270"}}}


id: GO:0032884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cell wall chitin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell wall chitin biosynthetic process (obsolete GO:0032884)","synonyms":[{"name":"regulation of cell wall chitin anabolism","type":"exact"},{"name":"regulation of cell wall chitin biosynthesis","type":"exact"},{"name":"regulation of cell wall chitin formation","type":"exact"},{"name":"regulation of cell wall chitin synthesis","type":"exact"}],"termid":"GO:0032884"}


id: GO:0018726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-phenanthrol + X-SO3(-) = HX + 9-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-phenanthrol sulfotransferase activity (obsolete GO:0018726)","synonyms":[{"name":"9-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018726"}


id: PBO:0081517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 426","termid":"PBO:0081517"}


id: MONDO:1011606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vestibular disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular disease, non-human animal","termid":"MONDO:1011414"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular disease, dog","secondary_identifiers":["OMIA:002263-9615"],"termid":"MONDO:1011606","xrefs":{"Monarch":{"xref_id":"1011606"}}}


id: MONDO:0033669
data:
  {"annotated_genes":["SJAG_02923"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87591],"is_not":false,"summary":null,"term":"MONDO:0033669"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C177121","UMLS:C5436773","OMIM:619087","GARD:16419","DOID:0112161","MEDGEN:1761918"],"synonyms":[{"name":"NS13","type":"exact"}],"termid":"MONDO:0033669","terms_by_termid":{"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0033669"}}}


id: GO:0009452
data:
  {"annotated_genes":["SJAG_04034","SJAG_04488","SJAG_01724","SJAG_01713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70206,77255,109625,74098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[60365],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which the RNA 5' cap structure, an inverted 7-methylguanosine linked via a 5'-5' triphosphate bridge (m7G(5')ppp(5')X) to the first transcribed residue, is added to a nascent transcript. Additional methylation can occur on the ribose sugars of the first and second nucleotides adjacent to the m7G nRNA cap. These methylations are often referred to as N6,2'-O-dimethyladenosine (m6,2A) and N6,2'-O-dimethylguanosine (m6,2G), respectively.","definition_xrefs":["GOC:vw","PMID:9266685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_01724":null,"SJAG_04034":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"7-methylguanosine RNA capping","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA capping","type":"broad"},{"name":"m(7)G RNA capping","type":"exact"}],"termid":"GO:0009452","terms_by_termid":{"GO:0006370":null,"GO:0106005":null}}


id: GO:0010972
data:
  {"annotated_genes":["SJAG_01855","SJAG_01429","SJAG_03160","SJAG_04597","SJAG_02098","SJAG_00526","SJAG_03073","SJAG_01076","SJAG_02723","SJAG_02332","SJAG_03854","SJAG_03695","SJAG_00082","SJAG_03927","SJAG_01205","SJAG_01605","SJAG_00640","SJAG_01044","SJAG_02563","SJAG_02392","SJAG_02858","SJAG_04394","SJAG_01680","SJAG_02592","SJAG_02074","SJAG_01010","SJAG_03026","SJAG_04287","SJAG_02771","SJAG_00364","SJAG_01118","SJAG_03067","SJAG_00318","SJAG_04280","SJAG_04671","SJAG_06592","SJAG_00600","SJAG_04332","SJAG_01873","SJAG_03602","SJAG_05373","SJAG_01084","SJAG_02576","SJAG_03942","SJAG_02266","SJAG_01146"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58711,60641,80377,95059,95405,96214,102887,106410,108578,108941,113397,113781,114447,116448],"is_not":false,"summary":null,"term":"GO:0010972"},{"annotations":[102427,103335,91819,117986,96255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[74084,80720,119095,118042,101235,93264,113999,119267,76661,81314,72858,95807,102428,108546,111265,118789,101068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[96395,100302,97711,117988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[119008,77017,67795,101237,93265,113691,90942,81187,61455,111266,108547,102942,62285,60744,74086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010389"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle G2/M phase transition","termid":"GO:1902750"},{"relation_name":"negatively_regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03160":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"negative regulation of G2/M transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"negative regulation of mitotic entry","type":"exact"}],"termid":"GO:0010972","terms_by_termid":{"GO:0007095":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0044878":null}}


id: GO:0044520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in another organism (obsolete GO:0044520)","synonyms":[{"name":"envenomation resulting in positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044520"}


id: PBO:0038611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 7","termid":"PBO:0038611"}


id: PBO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.4","termid":"PBO:0000464"}


id: PBO:0077518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 233","termid":"PBO:0077518"}


id: MONDO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myotonic dystrophy (obsolete MONDO:0000018)","termid":"MONDO:0000018","xrefs":{"Monarch":{"xref_id":"0000018"}}}


id: PBO:0055775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loss of heterozygosity on chromosome 1, region 1","termid":"PBO:0055775"}


id: PBO:0079143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN5 divergent transcript","termid":"PBO:0079143"}


id: MONDO:0022787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate heart disease polydactyly absent tibia","termid":"MONDO:0022787","xrefs":{"Monarch":{"xref_id":"0022787"}}}


id: GO:0006526
data:
  {"annotated_genes":["SJAG_00695","SJAG_00412","SJAG_00635","SJAG_04577","SJAG_00636","SJAG_01461","SJAG_01592","SJAG_01019","SJAG_00392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112420,100033,113041,80273,72057,104522,108447,120397,113871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"glutamine family amino acid biosynthetic process","termid":"GO:0009084"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-arginine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"arginine anabolism","type":"exact"},{"name":"arginine biosynthesis","type":"exact"},{"name":"arginine formation","type":"exact"},{"name":"arginine synthesis","type":"exact"}],"termid":"GO:0006526","terms_by_termid":{"GO:0042450":null}}


id: GO:0097101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of a blood vessel endothelial cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. A blood vessel endothelial cell is an endothelial cell of the vascular tree, which includes blood vessels and lymphatic vessels.","definition_xrefs":["GOC:dgh","PMID:21521739","CL:0002139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell fate specification","termid":"GO:0060847"},{"relation_name":"part_of","term_name":"blood vessel endothelial cell fate commitment","termid":"GO:0060846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell fate specification","termid":"GO:0097101"}


id: PBO:0083837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; proteasome-interacting protein involved in the assembly of the base subcomplex of the 19S proteasome regulatory particle (RP); null mutants accumulate ubiquitinated Gcn4p and display decreased 26S proteasome stability; interacts with Rpt5p","termid":"PBO:0083837"}


id: PBO:0003457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Spf31 (predicted)","termid":"PBO:0003457"}


id: PBO:0078436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-6","termid":"PBO:0078436"}


id: PBO:0052895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-6","termid":"PBO:0052895"}


id: PBO:0085345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; displays transacylase activity in vitro; overproduction confers resistance to lysophosphatidylcholine","termid":"PBO:0085345"}


id: GO:0010317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Refers to the alpha subunit of the heterodimeric complex that possesses pyrophosphate-dependent phosphofructokinase activity.","definition_xrefs":["PMID:2170409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"pyrophosphate-dependent phosphofructokinase complex","termid":"GO:0010316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyrophosphate-dependent phosphofructokinase complex, alpha-subunit complex","synonyms":[{"name":"PFK complex, alpha-subunit","type":"related"}],"termid":"GO:0010317"}


id: MONDO:0850347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcomatoid transitional cell carcinoma that is located in the bladder.","definition_xrefs":["DOID:0080901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcomatoid transitional cell carcinoma","termid":"MONDO:0002837"},{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder sarcomatoid transitional cell carcinoma","termid":"MONDO:0850347","xrefs":{"Monarch":{"xref_id":"0850347"}}}


id: MONDO:1011037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any oculocutaneous albinism that occurs in Japanese medaka due to a mutation in the SLC45A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, SLC45A2-related, Japanese medaka","secondary_identifiers":["OMIA:001821-8090"],"synonyms":[{"name":"coat color albinism, oculocutaneous type IV, Japanese medaka","type":"related"}],"termid":"MONDO:1011037","xrefs":{"Monarch":{"xref_id":"1011037"}}}


id: PBO:0064997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM4 antisense RNA 1","termid":"PBO:0064997"}


id: PBO:0048615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 7","termid":"PBO:0048615"}


id: MONDO:0009746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary sensory and autonomic neuropathy, type 4 (HSAN4) is an inherited disorder characterized by anhidrosis, insensitivity to pain, self-mutilating behavior and episodes of fever.","definition_xrefs":["Orphanet:642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy type 4","secondary_identifiers":["DOID:0070146","SCTID:62985007","GARD:3006","NCIT:C118633","UMLS:C0020074","PMID:14272277","icd11.foundation:1831234152","MEDGEN:6915","OMIM:256800","NANDO:2200854","PMID:8696348","NANDO:1200553"],"synonyms":[{"name":"CIP-anhidrosis syndrome","type":"exact"},{"name":"CIPA","type":"related"},{"name":"HSAN 4","type":"related"},{"name":"HSAN IV","type":"related"},{"name":"HSAN4","type":"exact"},{"name":"HSNAN4","type":"related"},{"name":"Hereditary Sensory and Autonomic Neuropathy Type IV","type":"exact"},{"name":"NTRK1 hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"congenital insensitivity to pain with anhidrosis","type":"exact"},{"name":"congenital insensitivity to pain-anhidrosis syndrome","type":"exact"},{"name":"familial dysautonomia, type 2","type":"related"},{"name":"hereditary sensory and autonomic neuropathy 4","type":"related"},{"name":"hereditary sensory and autonomic neuropathy caused by mutation in NTRK1","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type IV","type":"exact"},{"name":"hereditary sensory neuropathy type 4","type":"related"},{"name":"hereditary sensory neuropathy type IV","type":"exact"},{"name":"insensitivity to pain, congenital, with anhidrosis","type":"exact"},{"name":"neuropathy, congenital sensory, with anhidrosis","type":"related"}],"termid":"MONDO:0009746","xrefs":{"Monarch":{"xref_id":"0009746"}}}


id: PBO:0000564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"krr family protein (predicted)","termid":"PBO:0000564"}


id: PBO:0079116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 34","termid":"PBO:0079116"}


id: FYPO:0005825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to iron ions. Cells stop growing (and may die) at a concentration of iron ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to iron","synonyms":[{"name":"hypersensitive to iron","type":"exact"},{"name":"sensitive to iron during mitotic cell cycle","type":"related"},{"name":"sensitive to iron during vegetative growth","type":"exact"},{"name":"sensitive to iron ions","type":"exact"}],"termid":"FYPO:0005825"}


id: FYPO:0005477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"normal protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"normal protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005477"}


id: GO:0050730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"}


id: RO:0008508
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which organism a lays eggs on the outside surface of organism b. Organism b is neither helped nor harmed in the process of egg laying or incubation.","direct_ancestors":[{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_eggs_laid_on_by","termid":"RO:0008508"}


id: GO:0070711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an adenosine-uridine dinucleotide.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA adenosine-uridine insertion","synonyms":[{"name":"RNA AU insertion","type":"exact"}],"termid":"GO:0070711"}


id: PBO:0041300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4D","termid":"PBO:0041300"}


id: MONDO:0000853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kniest dysplasia (obsolete MONDO:0000853)","termid":"MONDO:0000853","xrefs":{"Monarch":{"xref_id":"0000853"}}}


id: GO:0097355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into heterochromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to heterochromatin","synonyms":[{"name":"protein localisation to heterochromatin","type":"exact"}],"termid":"GO:0097355"}


id: MONDO:0013201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of Waardenburg syndrome type 4 (Waardenburg-Shah syndrome) caused by mutations in EDN3.","direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg-Shah syndrome","termid":"MONDO:0019518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0004335"],"is_obsolete":false,"name":"Waardenburg syndrome type 4B","secondary_identifiers":["MEDGEN:412961","UMLS:C2750457","OMIM:613265","MESH:C567680","DOID:0110954","GARD:15641"],"synonyms":[{"name":"EDN3 Waardenburg syndrome","type":"exact"},{"name":"WS4B","type":"exact"},{"name":"Waardenburg syndrome caused by mutation in EDN3","type":"exact"},{"name":"Waardenburg syndrome type 4B","type":"exact"},{"name":"Waardenburg syndrome type IVB","type":"exact"},{"name":"Waardenburg syndrome with Hirschsprung disease type 4B","type":"exact"},{"name":"Waardenburg syndrome, type 4B","type":"related"},{"name":"Waardenburg syndrome, type 4B, with Hirschsprung disease","type":"related"}],"termid":"MONDO:0013201","xrefs":{"Monarch":{"xref_id":"0013201"}}}


id: PR:O74366
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIH subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02813","PANTHER:PTHR12831:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.07c","secondary_identifiers":["UniProtKB:O74366"],"synonyms":[{"name":"RNA polymerase II transcription factor B 34 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p34 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2H3","type":"exact"}],"termid":"PR:O74366"}


id: PBO:0038472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 10","termid":"PBO:0038472"}


id: GO:0071131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to laminin alpha-4.","definition_xrefs":["PMID:16824487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphaV-beta3 integrin-laminin alpha-4 complex","synonyms":[{"name":"ITGAV-ITGB3-LAMA4 complex","type":"narrow"}],"termid":"GO:0071131"}


id: PBO:0066801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 100","termid":"PBO:0066801"}


id: GO:0010751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of nitric oxide mediated signal transduction. Nitric oxide mediated signal transduction is The series of molecular signals mediated by the detection of nitric oxide (NO).","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitric oxide mediated signal transduction","termid":"GO:0010749"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nitric oxide mediated signal transduction","synonyms":[{"name":"negative regulation of nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0010751"}


id: PBO:0058110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4325","termid":"PBO:0058110"}


id: PBO:0032750
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene coordinates updated","termid":"PBO:0032750"}


id: GO:1905206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cell death in response to hydrogen peroxide.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","PMID:20550618"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of hydrogen peroxide-induced cell death (obsolete GO:1905206)","synonyms":[{"name":"activation of cell death in response to H2O2","type":"narrow"},{"name":"activation of cell death in response to hydrogen peroxide","type":"narrow"},{"name":"activation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"positive regulation of cell death in response to H2O2","type":"exact"},{"name":"positive regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"positive regulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"up regulation of cell death in response to H2O2","type":"exact"},{"name":"up regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"up regulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"up-regulation of cell death in response to H2O2","type":"exact"},{"name":"up-regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"up-regulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"upregulation of cell death in response to H2O2","type":"exact"},{"name":"upregulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"upregulation of hydrogen peroxide-mediated cell death","type":"related"}],"termid":"GO:1905206"}


id: GO:0034173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 11 signaling pathway","termid":"GO:0034171"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"positive regulation of TLR11 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034173"}


id: GO:0018114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine = D-threonine.","definition_xrefs":["RHEA:13913","EC:5.1.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"threonine racemase activity","secondary_identifiers":["KEGG_REACTION:R01467","MetaCyc:THREONINE-RACEMASE-RXN"],"termid":"GO:0018114"}


id: PBO:0079339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 23B","termid":"PBO:0079339"}


id: GO:0005308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of creatine from one side of a membrane to the other. Creatine is a compound synthesized from the amino acids arginine, glycine, and methionine that occurs in muscle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"creatine transmembrane transporter activity","termid":"GO:0005308"}


id: PBO:0051285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-32 (pseudogene)","termid":"PBO:0051285"}


id: GO:1904866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a ventral tegmental area (VTA) over time, from its formation to the mature structure.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","PMID:26548362","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral tegmental area development","synonyms":[{"name":"VTA development","type":"broad"},{"name":"a10a development","type":"exact"},{"name":"area tegmentalis ventralis (Tsai) development","type":"related"},{"name":"area tegmentalis ventralis development","type":"related"},{"name":"tegmentum ventrale development","type":"related"},{"name":"ventral brain stem development","type":"related"},{"name":"ventral tegmental area (Tsai) development","type":"related"},{"name":"ventral tegmental area of tsai development","type":"exact"},{"name":"ventral tegmental nucleus (Rioch) development","type":"related"},{"name":"ventral tegmental nucleus (tsai) development","type":"exact"},{"name":"ventral tegmental nucleus of tsai development","type":"exact"},{"name":"ventral tegmentum development","type":"exact"},{"name":"ventromedial mesencephalic tegmentum development","type":"related"}],"termid":"GO:1904866"}


id: PBO:0068154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 461","termid":"PBO:0068154"}


id: PBO:0090438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm6","termid":"PBO:0090438"}


id: GO:0110161
data:
  {"annotated_genes":["SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113398],"is_not":false,"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic prophase (spindle phase one).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic spindle organization","termid":"GO:0110028"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle formation (spindle phase one)","termid":"GO:0110159"},{"relation_name":"is_a","term_name":"positive regulation of spindle assembly","termid":"GO:1905832"},{"relation_name":"positively_regulates","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0007049","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"positive regulation of mitotic spindle formation (spindle phase one)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110161","terms_by_termid":{"GO:0110161":null}}


id: PBO:0075458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 8","termid":"PBO:0075458"}


id: MONDO:0006249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp found mainly in the stomach and colon. Microscopically, it is characterized by elongated, serrated crypts lined by proliferative epithelium. Hyperplastic polyps are traditionally considered non-neoplastic, but ras mutation is common, clonality has been demonstrated and biochemical abnormalities and epidemiological associations that occur in colorectal adenomas and carcinomas have been found (WHO Tumors of the Digestive System, 2000).","definition_xrefs":["NCIT:C4083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperplastic polyp","secondary_identifiers":["MEDGEN:87189","UMLS:C0333983","EFO:1000299"],"synonyms":[{"name":"HP","type":"exact"},{"name":"MP","type":"exact"},{"name":"metaplastic polyp","type":"exact"}],"termid":"MONDO:0006249","xrefs":{"Monarch":{"xref_id":"0006249"}}}


id: PBO:0056308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 4","termid":"PBO:0056308"}


id: MONDO:0007756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hyperkeratosis lenticularis perstans","secondary_identifiers":["OMIM:144150","Orphanet:409","SCTID:28488007","UMLS:C0263420","HP:0007570","MedDRA:10071311","MEDGEN:120477","MESH:C538377","GARD:2824"],"synonyms":[{"name":"Flegel disease","type":"exact"},{"name":"Flegel's disease","type":"related"},{"name":"HLP","type":"related"},{"name":"hyperkeratosis lenticularis perstans","type":"exact"},{"name":"hyperkeratosis lenticularis perstans (disease)","type":"exact"},{"name":"hyperkeratosis lenticularis perstans of Flegel","type":"related"}],"termid":"MONDO:0007756","xrefs":{"Monarch":{"xref_id":"0007756"}}}


id: GO:0102830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 stachyose = verbascose + raffinose.","definition_xrefs":["PMID:12060258","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"verbascose synthase activity","secondary_identifiers":["MetaCyc:RXN-8286"],"termid":"GO:0102830"}


id: GO:0090420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving naphthalene-containing compounds.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene-containing compound metabolic process (obsolete GO:0090420)","termid":"GO:0090420"}


id: MONDO:0013498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation of SHANK3 on chromosome 22q13.33.","definition_xrefs":["DOID:0070091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 15","secondary_identifiers":["MEDGEN:462730","OMIM:613950","UMLS:C3151380"],"synonyms":[{"name":"SCZD15","type":"exact"},{"name":"schizophrenia 15","type":"exact"},{"name":"schizophrenia 15 with or without an affective disorder","type":"related"},{"name":"schizophrenia susceptibility locus, chromosome 22Q13-related","type":"related"},{"name":"schizophrenia type 15","type":"exact"}],"termid":"MONDO:0013498","xrefs":{"Monarch":{"xref_id":"0013498"}}}


id: PBO:0062414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 43 pseudogene","termid":"PBO:0062414"}


id: PBO:0089522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid reductase","termid":"PBO:0089522"}


id: MONDO:0016492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Beta-thalassemias with other manifestations are a group of beta-thalassemias associated with another disorder.","definition_xrefs":["Orphanet:231386"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-thalassemia with other manifestations (obsolete MONDO:0016492)","termid":"MONDO:0016492","xrefs":{"Monarch":{"xref_id":"0016492"}}}


id: FYPO:0003459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is lower than normal when the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular trehalose level during cellular response to salt stress","synonyms":[{"name":"decreased cellular trehalose level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose level during vegetative growth and during cellular response to salt stress","type":"exact"},{"name":"decreased cellular trehalose level in response to salt stress","type":"exact"},{"name":"decreased trehalose accumulation during cellular response to salt stress","type":"related"},{"name":"reduced cellular trehalose level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003459"}


id: PBO:0088004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p, inactivating osmosensing MAPK cascade; involved in Fus3p activation during pheromone response; deletion affects precursor tRNA splicing, mitochondrial inheritance, and sporulation","termid":"PBO:0088004"}


id: GO:0098661
data:
  {"annotated_genes":["SJAG_01080","SJAG_02463","SJAG_01059","SJAG_01319","SJAG_00048","SJAG_00671","SJAG_04241","SJAG_01168","SJAG_01973","SJAG_04990","SJAG_01941","SJAG_01183","SJAG_03442","SJAG_00233","SJAG_01033","SJAG_03401","SJAG_00547"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91321],"is_not":false,"summary":null,"term":"GO:0098661"},{"annotations":[112922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"},{"annotations":[78996,72156,75167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902476"},{"annotations":[115716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"},{"annotations":[69398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990547"},{"annotations":[90228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[117773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[118491,111653,114698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035435"},{"annotations":[116494,90926,108605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180042"},{"annotations":[101272],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000185"},{"annotations":[67065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[62427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"}]},"cv_name":"biological_process","definition":"The process in which an inorganic anion is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"inorganic ion transmembrane transport","termid":"GO:0098660"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00233":null,"SJAG_00547":null,"SJAG_00671":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_01080":null,"SJAG_01168":null,"SJAG_01183":null,"SJAG_01319":null,"SJAG_01941":null,"SJAG_01973":null,"SJAG_02463":null,"SJAG_03401":null,"SJAG_03442":null,"SJAG_04241":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"inorganic anion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"inorganic anion membrane transport","type":"exact"},{"name":"transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:0098661","terms_by_termid":{"GO:0035435":null,"GO:0098661":null,"GO:0140116":null,"GO:0140159":null,"GO:0180029":null,"GO:0180042":null,"GO:1902358":null,"GO:1902434":null,"GO:1902476":null,"GO:1990547":null,"GO:1990557":null,"GO:2000185":null}}


id: GO:0003833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the synthesis of beta-alanyl amine conjugate from a precursor biogenic amine, such as dopamine or histamine.","definition_xrefs":["PMID:25229196","GOC:bf","PMID:12957543","ISBN:0198506732","PMID:12900414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-alanyl amine synthase activity","synonyms":[{"name":"N-beta-alanyl dopamine synthetase activity","type":"exact"},{"name":"NBAD transferase activity","type":"exact"},{"name":"beta-alanyl-dopamine synthase activity","type":"related"}],"termid":"GO:0003833"}


id: GO:0070681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tRNA aminoacylation process in which glutaminyl-tRNAGln is formed by a tRNA-dependent two-step pathway. In the first step a non-discriminating glutamyl-tRNAGlx synthetase generates the misacylated L-glutamyl-tRNAGln species, and in the second step it is amidated to the correctly charged L-glutaminyl-tRNAGln by a glutamyl-tRNAGln amidotransferase.","definition_xrefs":["MetaCyc:PWY-5921","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation","termid":"GO:0043039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"glutaminyl-tRNAGln biosynthesis via transamidation","termid":"GO:0070681"}


id: SO:0001488
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, where additional work has been performed, using either manual or automated methods, such as gap resolution.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"improved_high_quality_draft","synonyms":[{"name":"improved high quality draft","type":"exact"}],"termid":"SO:0001488"}


id: GO:0021503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of the neural fold elevations that results in the movement of the tips of the elevations towards each other in order to fuse.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021","PMID:15806586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"neural fold formation","termid":"GO:0001842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold bending","termid":"GO:0021503"}


id: PBO:0117250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase","termid":"PBO:0117250"}


id: GO:0051201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a prosthetic group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of prosthetic group metabolic process (obsolete GO:0051201)","synonyms":[{"name":"down regulation of prosthetic group metabolic process","type":"exact"},{"name":"down-regulation of prosthetic group metabolic process","type":"exact"},{"name":"downregulation of prosthetic group metabolic process","type":"exact"},{"name":"inhibition of prosthetic group metabolic process","type":"narrow"},{"name":"negative regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"negative regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"negative regulation of prosthetic group metabolism","type":"exact"}],"termid":"GO:0051201"}


id: PBO:0109366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 3B","termid":"PBO:0109366"}


id: FYPO:0006949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-methyl-L-ergothioneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular S-methyl-L-ergothioneine level during vegetative growth","synonyms":[{"name":"increased S-methyl-L-ergothioneine accumulation during vegetative growth","type":"related"},{"name":"increased cellular S-methyl-L-ergothioneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006949"}


id: MONDO:0021932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trypanosomiasis caused by infection by Trypanosoma brucei gambiense.","definition_xrefs":["NCIT:C35084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human African trypanosomiasis","termid":"MONDO:0005459"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"parasitic skin disorder","termid":"MONDO:0024610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"infection by Trypanosoma gambiense","secondary_identifiers":["SCTID:75809006","ICD9:086.3","MEDGEN:11933","UMLS:C0041232"],"synonyms":[{"name":"Gambian sleeping sickness","type":"related"},{"name":"Gambian trypanosomiasis","type":"related"},{"name":"Gambiense trypanosomiasis infection","type":"related"},{"name":"Infection by Trypanosoma gambiense","type":"exact"},{"name":"Infection caused by Trypanosoma gambiense","type":"related"},{"name":"chronic sleeping sickness","type":"related"}],"termid":"MONDO:0021932","xrefs":{"Monarch":{"xref_id":"0021932"}}}


id: FYPO:0005988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which microtubule anchoring at the cell cortex of the cell tip does not occur during the meiotic cell cycle. Normally, anchoring maintains the localization of microtubules with their plus ends at the cell cortex.","definition_xrefs":["PMID:25736293","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abolished microtubule anchoring at cell cortex of cell tip during meiotic cell cycle","synonyms":[{"name":"abolished microtubule anchoring at cell tip cortex during meiotic cell cycle","type":"exact"},{"name":"abolished microtubule cortical anchoring at cell tip during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005988"}


id: GO:0002817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antibacterial peptide biosynthetic process","termid":"GO:0002809"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002816"},{"relation_name":"negatively_regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","synonyms":[{"name":"down regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"},{"name":"down-regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"},{"name":"downregulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"},{"name":"inhibition of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"narrow"}],"termid":"GO:0002817"}


id: MONDO:0700159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor arising from odontogenic epithelium and occurs in a dog.","definition_xrefs":["NCIT:C134956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine acanthomatous epulis","termid":"MONDO:0700159","xrefs":{"Monarch":{"xref_id":"0700159"}}}


id: MONDO:1011480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Becker type muscular dystrophy that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Becker type muscular dystrophy, non-human animal","termid":"MONDO:1011435"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Becker type muscular dystrophy, pig","secondary_identifiers":["OMIA:001888-9823"],"termid":"MONDO:1011480","xrefs":{"Monarch":{"xref_id":"1011480"}}}


id: MONDO:0015024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ectodermal dysplasia syndrome in which the cause of the disease is a mutation in the KDF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 12, hypohidrotic/hair/tooth/nail type","secondary_identifiers":["UMLS:C4310616","MEDGEN:934583","GARD:18593","DOID:0111652","OMIM:617337"],"synonyms":[{"name":"ECTD12","type":"exact"},{"name":"KDF1 ectodermal dysplasia syndrome","type":"exact"},{"name":"ectodermal dysplasia 12, hypohidrotic/hair/Tooth/nail type","type":"exact"},{"name":"ectodermal dysplasia 12, hypohidrotic/hair/tooth/nail type; ECTD12","type":"exact"},{"name":"ectodermal dysplasia syndrome caused by mutation in KDF1","type":"exact"}],"termid":"MONDO:0015024","xrefs":{"Monarch":{"xref_id":"0015024"}}}


id: MONDO:0026152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic porokeratosis (obsolete MONDO:0026152)","secondary_identifiers":["Orphanet:183444"],"termid":"MONDO:0026152","xrefs":{"Monarch":{"xref_id":"0026152"}}}


id: GO:0036026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and tissue-type plasminogen activator (PLAT); formation of the complex inhibits the serine protease activity of tissue-type plasminogen activator.","definition_xrefs":["PMID:10340997","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-PLAT complex","synonyms":[{"name":"PCI-PLAT complex","type":"exact"},{"name":"SERPINA5-PLAT complex","type":"exact"},{"name":"plasma serine protease inhibitor-PLAT complex","type":"exact"},{"name":"protein C inhibitor-tPA complex","type":"exact"},{"name":"protein C inhibitor-tissue-type plasminogen activator complex","type":"exact"},{"name":"serpin A5-PLAT complex","type":"exact"}],"termid":"GO:0036026"}


id: PBO:0027178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_cortical_patches_present_in_increased_numbers_at_cell_tip_during_early_mitosis","termid":"PBO:0027178"}


id: PBO:0078641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA component interacting RNase","termid":"PBO:0078641"}


id: PBO:0070270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 4","termid":"PBO:0070270"}


id: GO:0061710
data:
  {"annotated_genes":["SJAG_04700"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69471],"is_not":false,"summary":null,"term":"GO:0061710"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine + ATP + bicarbonate = L-threonylcarbamoyladenylate + diphosphate + H2O.","definition_xrefs":["EC:2.7.7.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"L-threonylcarbamoyladenylate synthase","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-14569","RHEA:36407"],"termid":"GO:0061710","terms_by_termid":{"GO:0061710":null}}


id: GO:0006611
data:
  {"annotated_genes":["SJAG_04366","SJAG_01534","SJAG_00375","SJAG_01805","SJAG_03836","SJAG_04464","SJAG_00753","SJAG_04656","SJAG_04312","SJAG_04400","SJAG_04472","SJAG_01245","SJAG_01358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65559,65925,73324,95010,103046,111539,119381,119666,120020],"is_not":false,"summary":null,"term":"GO:0006611"},{"annotations":[103748,95651,112974,102328],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0046827"}]},"cv_name":"biological_process","definition":"The directed movement of a protein from the nucleus into the cytoplasm.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"nuclear export","termid":"GO:0051168"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00375":null,"SJAG_00753":null,"SJAG_01245":null,"SJAG_01358":null,"SJAG_01534":null,"SJAG_01805":null,"SJAG_03836":null,"SJAG_04312":null,"SJAG_04366":null,"SJAG_04400":null,"SJAG_04464":null,"SJAG_04472":null,"SJAG_04656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006913","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein export from nucleus","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0097349"],"synonyms":[{"name":"copper-induced protein export from nucleus","type":"related"},{"name":"protein export from cell nucleus","type":"exact"},{"name":"protein export out of nucleus","type":"exact"},{"name":"protein transport from nucleus to cytoplasm","type":"exact"},{"name":"protein-nucleus export","type":"exact"}],"termid":"GO:0006611","terms_by_termid":{"GO:0006611":null,"GO:0046827":null}}


id: PBO:0074131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 32 member 1","termid":"PBO:0074131"}


id: GO:1905423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plant organ morphogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of plant organ morphogenesis","termid":"GO:1905421"},{"relation_name":"positively_regulates","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of plant organ morphogenesis","synonyms":[{"name":"activation of plant organ morphogenesis","type":"narrow"},{"name":"up regulation of plant organ morphogenesis","type":"exact"},{"name":"up-regulation of plant organ morphogenesis","type":"exact"},{"name":"upregulation of plant organ morphogenesis","type":"exact"}],"termid":"GO:1905423"}


id: GO:0050773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendrite development.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendrite development","termid":"GO:0050773"}


id: MONDO:0018868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lysosomal storage disorder characterized by intralysosomal accumulation of sulfatides in various tissues, leading to progressive deterioration of motor and neurocognitive function.","definition_xrefs":["Orphanet:512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0002039","MONDO:0002525","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"metachromatic leukodystrophy","secondary_identifiers":["NANDO:2200560","SCTID:66521008","NORD:1369","GARD:3230","DOID:10581","icd11.foundation:172326564","MEDGEN:6071","MESH:D007966","NCIT:C61251","MedDRA:10067609","SCTID:238031009","SCTID:396338004","UMLS:C0023522","NANDO:1200078"],"synonyms":[{"name":"MLD","type":"exact"},{"name":"Scholz cerebral sclerosis","type":"exact"},{"name":"arylsulfatase A deficiency","type":"exact"},{"name":"deficiency of cerebroside-sulfatase","type":"exact"},{"name":"sulfatide lipoidosis","type":"exact"}],"termid":"MONDO:0018868","xrefs":{"Monarch":{"xref_id":"0018868"}}}


id: MONDO:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Fanconi renotubular syndrome (obsolete MONDO:0000026)","termid":"MONDO:0000026","xrefs":{"Monarch":{"xref_id":"0000026"}}}


id: GO:1903917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of endoplasmic reticulum stress-induced eIF2alpha dephosphorylation.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058","PMID:11381086","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of endoplasmic reticulum stress-induced eIF2 alpha dephosphorylation (obsolete GO:1903917)","synonyms":[{"name":"activation of eIF2alpha dephosphorylation in response to ER stress","type":"narrow"},{"name":"activation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"narrow"},{"name":"activation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"narrow"},{"name":"positive regulation of ER stress-induced eIF2 alpha dephosphorylation","type":"exact"},{"name":"positive regulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"positive regulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"up regulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"up-regulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"upregulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1903917"}


id: GO:1900650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dehydroaustinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of dehydroaustinol biosynthetic process","termid":"GO:1900649"},{"relation_name":"negatively_regulates","term_name":"dehydroaustinol biosynthetic process","termid":"GO:1900563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dehydroaustinol biosynthetic process","synonyms":[{"name":"down regulation of dehydroaustinol anabolism","type":"exact"},{"name":"down regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"down regulation of dehydroaustinol biosynthetic process","type":"exact"},{"name":"down regulation of dehydroaustinol formation","type":"exact"},{"name":"down regulation of dehydroaustinol synthesis","type":"exact"},{"name":"down-regulation of dehydroaustinol anabolism","type":"exact"},{"name":"down-regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"down-regulation of dehydroaustinol biosynthetic process","type":"exact"},{"name":"down-regulation of dehydroaustinol formation","type":"exact"},{"name":"down-regulation of dehydroaustinol synthesis","type":"exact"},{"name":"downregulation of dehydroaustinol anabolism","type":"exact"},{"name":"downregulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"downregulation of dehydroaustinol biosynthetic process","type":"exact"},{"name":"downregulation of dehydroaustinol formation","type":"exact"},{"name":"downregulation of dehydroaustinol synthesis","type":"exact"},{"name":"inhibition of dehydroaustinol anabolism","type":"exact"},{"name":"inhibition of dehydroaustinol biosynthesis","type":"exact"},{"name":"inhibition of dehydroaustinol biosynthetic process","type":"narrow"},{"name":"inhibition of dehydroaustinol formation","type":"exact"},{"name":"inhibition of dehydroaustinol synthesis","type":"exact"},{"name":"negative regulation of dehydroaustinol anabolism","type":"exact"},{"name":"negative regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"negative regulation of dehydroaustinol formation","type":"exact"},{"name":"negative regulation of dehydroaustinol synthesis","type":"exact"}],"termid":"GO:1900650"}


id: MONDO:0015920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic neurometabolic disease with X-linked intellectual disability (obsolete MONDO:0015920)","secondary_identifiers":["Orphanet:182076"],"termid":"MONDO:0015920","xrefs":{"Monarch":{"xref_id":"0015920"}}}


id: MONDO:0004056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive or non-invasive papillary transitional cell carcinoma of the urinary bladder. It is classified as low - or high-grade. -- 2003","definition_xrefs":["NCIT:C7383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder papillary urothelial neoplasm","termid":"MONDO:0003442"},{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"},{"relation_name":"is_a","term_name":"papillary transitional cell carcinoma","termid":"MONDO:0006350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder papillary urothelial carcinoma","secondary_identifiers":["DOID:6975","MEDGEN:309552","UMLS:C1518882"],"synonyms":[{"name":"bladder papillary urothelial carcinoma","type":"exact"},{"name":"bladder urothelial papillary carcinoma","type":"related"},{"name":"urinary bladder papillary transitional cell carcinoma","type":"exact"},{"name":"urothelial papillary carcinoma of the bladder","type":"exact"}],"termid":"MONDO:0004056","xrefs":{"Monarch":{"xref_id":"0004056"}}}


id: MOD:00862
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-alanine.","definition_xrefs":["PubMed:7287302","PubMed:7961627","ChEBI:29949","RESID:AA0191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-alanine","synonyms":[{"name":"(R)-2-aminopropanoic acid","type":"exact"},{"name":"D-alanine","type":"exact"},{"name":"MOD_RES D-alanine (Ala)","type":"exact"},{"name":"MOD_RES D-alanine (Ser)","type":"exact"}],"termid":"MOD:00862"}


id: PBO:0079657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 5","termid":"PBO:0079657"}


id: PBO:0087174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B16; forms dissociable heterodimer with Rpb4p; Rpb4/7 dissociates from RNAPII as Ser2 CTD phosphorylation increases; Rpb4/7 regulates cellular lifespan via mRNA decay process; involved in recruitment of 3'-end processing factors to transcribing RNA polymerase II complex, export of mRNA to cytoplasm under stress conditions; also involved in translation initiation","termid":"PBO:0087174"}


id: PR:000050560
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the tif211 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC3G9.09c","termid":"PR:000050560"}


id: MONDO:0004524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland adenoma with increased cellularity and nuclear atypia. There is no capsular or vascular invasion. The clinical course is benign.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular thyroid adenoma","termid":"MONDO:0005032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid gland atypical follicular adenoma","secondary_identifiers":["DOID:8292","NCIT:C27729","ICDO:8330/1","MEDGEN:224756","UMLS:C1266046"],"synonyms":[{"name":"atypical follicular adenoma","type":"exact"},{"name":"atypical follicular adenoma (morphologic abnormality)","type":"exact"},{"name":"thyroid gland atypical follicular adenoma","type":"exact"}],"termid":"MONDO:0004524","xrefs":{"Monarch":{"xref_id":"0004524"}}}


id: MONDO:1010009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrial septal defect that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrial septal defect, non-human animal","secondary_identifiers":["OMIA:000089"],"termid":"MONDO:1010009","xrefs":{"Monarch":{"xref_id":"1010009"}}}


id: FYPO:0001703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which a specific mitotic cell cycle checkpoint is normal (i.e. indistinguishable from wild type). A cell cycle checkpoint controls cell cycle progression by monitoring the timing and integrity of specific cell cycle events.","definition_xrefs":["GO:0000075","GO:0007093","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint phenotype","termid":"FYPO:0000137"},{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000298","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic cell cycle checkpoint","synonyms":[{"name":"normal cell cycle checkpoint activation","type":"exact"}],"termid":"FYPO:0001703"}


id: PBO:0047858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(q31)","termid":"PBO:0047858"}


id: FYPO:0007858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes one or more rounds of rereplication of the entire genome without forming a mitotic spindle or undergoing cytokinesis.","definition_xrefs":["PomBase:mah","PMID:20967237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"mitotic DNA re-replication in absence of mitotic spindle","synonyms":[{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle","type":"exact"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle during vegetative growth","type":"exact"},{"name":"mitotic DNA re-replication in the absence of normal mitotic spindle assembly and cytokinesis","type":"exact"}],"termid":"FYPO:0007858"}


id: GO:0030875
data:
  {"annotated_genes":["SJAG_04210","SJAG_05180","SJAG_05237","SJAG_03603"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101156,103061,117255,121424],"is_not":false,"summary":null,"term":"GO:0030875"}]},"cv_name":"cellular_component","definition":"Any of the tandem arrays of rDNA localized at the periphery of the nucleus and protruding into the nucleolus, and associated proteins. May be visible as a single or double spot by DAPI staining.","definition_xrefs":["PMID:1629244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolar chromatin","termid":"GO:0030874"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03603":null,"SJAG_04210":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005575","GO:0005730"],"is_obsolete":false,"name":"rDNA protrusion","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"synonyms":[{"name":"ribosomal DNA protrusion","type":"exact"}],"termid":"GO:0030875","terms_by_termid":{"GO:0030875":null}}


id: GO:0061381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that will reside in the diencephalon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain cell migration","termid":"GO:0021885"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration in diencephalon","termid":"GO:0061381"}


id: PBO:0070307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 13","termid":"PBO:0070307"}


id: MOD:00570
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 71.037114 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 71.0-71.1 Da","termid":"MOD:00769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 71.037114 Da","termid":"MOD:00570"}


id: PBO:0011117
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE domain recruiting","termid":"PBO:0011117"}


id: PBO:0030786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_aseptate_vegetative_cell","termid":"PBO:0030786"}


id: PBO:0062834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex non-catalytic subunit","termid":"PBO:0062834"}


id: GO:1901431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cycloalkane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to cycloalkane","termid":"GO:0014071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cycloalkane","termid":"GO:1901431"}


id: GO:0120178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any steroid hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:nln","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"steroid hormone biosynthetic process","termid":"GO:0120178"}


id: MONDO:0056806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the lung. It is characterized by the presence of large malignant cells. It includes the clear cell and papillary variants of squamous cell carcinoma.","definition_xrefs":["NCIT:C133254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell lung carcinoma","termid":"MONDO:0005097"},{"relation_name":"is_a","term_name":"non-small cell lung carcinoma","termid":"MONDO:0005233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-small cell squamous lung carcinoma","secondary_identifiers":["DOID:0080521","UMLS:C4509816","MEDGEN:1383559","SCTID:723301009"],"synonyms":[{"name":"non-small cell squamous lung cancer","type":"exact"},{"name":"non-small cell squamous lung carcinoma","type":"exact"},{"name":"squamous non-small cell lung carcinoma","type":"exact"}],"termid":"MONDO:0056806","xrefs":{"Monarch":{"xref_id":"0056806"}}}


id: PBO:0109368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 4B","termid":"PBO:0109368"}


id: PBO:0064984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein BstNI subfamily 1","termid":"PBO:0064984"}


id: GO:1905941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gonad development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15342467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of gonad development","termid":"GO:1905939"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gonad development","synonyms":[{"name":"activation of gonad development","type":"narrow"},{"name":"activation of gonadogenesis","type":"narrow"},{"name":"positive regulation of gonadogenesis","type":"exact"},{"name":"up regulation of gonad development","type":"exact"},{"name":"up regulation of gonadogenesis","type":"exact"},{"name":"up-regulation of gonad development","type":"exact"},{"name":"up-regulation of gonadogenesis","type":"exact"},{"name":"upregulation of gonad development","type":"exact"},{"name":"upregulation of gonadogenesis","type":"exact"}],"termid":"GO:1905941"}


id: MONDO:0008269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly of a biphalangeal thumb or PPD1 is the most common form of preaxial polydactyly of fingers, a limb malformation syndrome, that is characterized by the duplication of one or more skeletal components of a biphalangeal thumb. Hands are preferentially affected (in bilateral), and the right hand is more commonly involved than the left.","definition_xrefs":["Orphanet:93339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preaxial polydactyly of fingers","termid":"MONDO:0017425"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of a biphalangeal thumb","secondary_identifiers":["OMIM:174400","UMLS:C1395852","SCTID:445216006","GARD:4417","MEDGEN:237235","MESH:C536332"],"synonyms":[{"name":"Fromont anomaly","type":"related"},{"name":"PPD1","type":"exact"},{"name":"polydactyly preaxial 1","type":"related"},{"name":"polydactyly, preaxial 1","type":"related"},{"name":"polydactyly, preaxial I","type":"related"},{"name":"polydactyly, preaxial type 1","type":"exact"},{"name":"preaxial polydactyly 1","type":"related"},{"name":"preaxial polydactyly type 1","type":"exact"},{"name":"thenar hypoplasia","type":"related"},{"name":"thumb polydactyly","type":"related"}],"termid":"MONDO:0008269","xrefs":{"Monarch":{"xref_id":"0008269"}}}


id: MONDO:0022603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly tibial hypoplasia","termid":"MONDO:0022603","xrefs":{"Monarch":{"xref_id":"0022603"}}}


id: PBO:0000379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme","termid":"PBO:0000379"}


id: PBO:0111927
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide Mi","termid":"PBO:0111927"}


id: MONDO:0019010
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334","SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88306,88307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[88635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"}]},"cv_name":"mondo","definition":"Congenital isolated hyperinsulinism (CHI), a rare endocrine disease is the most frequent cause of severe and persistent hypoglycemia in the neonatal period and early infancy and is characterized by an excessive or uncontrolled insulin secretion (inappropriate for the level of glycemia) and recurrent episodes of profound hypoglycemia requiring rapid and intensive treatment to prevent neurological sequelae. CHI comprises 2 different forms: diazoxide-sensitive diffuse hyperinsulinism and diazoxide-resistant hyperinsulinism.","definition_xrefs":["Orphanet:657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"islet cell adenomatosis","termid":"MONDO:0007834"},{"relation_name":"is_a","term_name":"familial hyperinsulinism","termid":"MONDO:0017182"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03266":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"congenital isolated hyperinsulinism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:999","GARD:3947","NCIT:C122923"],"synonyms":[{"name":"Congenital Hyperinsulinism","type":"exact"},{"name":"PHHI","type":"exact"},{"name":"chi","type":"exact"},{"name":"congenital hyperinsulinism","type":"related"},{"name":"hyperinsulinemic hypoglycemia familial","type":"related"},{"name":"hyperinsulinism congenital","type":"related"},{"name":"hyperinsulinism familial with pancreatic nesidioblastosis","type":"related"},{"name":"hypoglycemia hyperinsulinemic of infancy","type":"related"},{"name":"persistent hyperinsulinemic hypoglycemia of infancy","type":"exact"}],"termid":"MONDO:0019010","terms_by_termid":{"MONDO:0011236":null,"MONDO:0011717":null},"xrefs":{"Monarch":{"xref_id":"0019010"}}}


id: MONDO:0030476
data:
  {"annotated_genes":["SJAG_04700"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87853],"is_not":false,"summary":null,"term":"MONDO:0030476"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794230","OMIM:619609","UMLS:C5562020"],"synonyms":[{"name":"GAMOS10","type":"exact"}],"termid":"MONDO:0030476","terms_by_termid":{"MONDO:0030476":null},"xrefs":{"Monarch":{"xref_id":"0030476"}}}


id: MONDO:0009534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"chronic mucocutaneous candidiasis due to inhibition of lymphoblastic transformation","secondary_identifiers":["MESH:C565433","UMLS:C1855476","OMIM:247430","MEDGEN:344504"],"synonyms":[{"name":"lymphoblastic transformation, inhibition of","type":"exact"}],"termid":"MONDO:0009534","xrefs":{"Monarch":{"xref_id":"0009534"}}}


id: PBO:0089845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase Erg26","termid":"PBO:0089845"}


id: GO:0017059
data:
  {"annotated_genes":["SJAG_02706","SJAG_01857","SJAG_04550","SJAG_02305","SJAG_04178","SJAG_00880"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74848,80702,95393,98773,107456,107914],"is_not":false,"summary":null,"term":"GO:0017059"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyses the condensation of L-serine with palmitoyl-CoA to form 3-ketosphinganine, the sphingoid base which is the starting point for all sphingolipids. In bacteria the enzyme is a cytoplasmic homodimer, whereas in eukaryotes the enzyme is a multiprotein complex localised to the endoplasmic reticulum. The eukaryotic complex consists of catalytic components (SPTLC1, SPTLC2 and SPTLC3 in humans; LCB1 and LCB2 in S. cerevisiae) and regulatory components, which include activators (SPTSSA/SPTSSB in humans, TSC3 in S. cerevisiae) and negative regulators (ORMDL1/ORMDL2/ORMDL3 in humans, ORM1/2 in S. cerevisiae ).","definition_xrefs":["PMID:29863195","PMID:33558761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase complex","termid":"GO:0002178"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01857":null,"SJAG_02305":null,"SJAG_02706":null,"SJAG_04178":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"serine palmitoyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SPOTS complex","type":"related"},{"name":"SPT","type":"related"},{"name":"serine C-palmitoyltransferase complex","type":"related"},{"name":"serine palmitoyltransferase, Orm1/2, Tsc3 and Sac1 complex","type":"related"}],"termid":"GO:0017059","terms_by_termid":{"GO:0017059":null}}


id: MONDO:0004717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vascular disease of the liver characterized by the occurrence of multiple blood-filled cysts or cavities. The cysts are lined with endothelial cells; the cavities lined with hepatic parenchymal cells (hepatocytes). Peliosis hepatis has been associated with use of anabolic steroids (anabolic agents) and certain drugs.","definition_xrefs":["MESH:D010382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"peliosis hepatis","secondary_identifiers":["MEDGEN:10618","SCTID:58008004","EFO:1001387","DOID:914","ICD10CM:K76.4","icd11.foundation:1210061614","UMLS:C0030781"],"synonyms":[{"name":"hepatic peliosis","type":"exact"}],"termid":"MONDO:0004717","xrefs":{"Monarch":{"xref_id":"0004717"}}}


id: PBO:0030080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_lysine_import_during_nitrogen_starvation","termid":"PBO:0030080"}


id: PBO:0004307
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of chaperonin-containing T-complex","termid":"PBO:0004307"}


id: PBO:0050376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3","termid":"PBO:0050376"}


id: FYPO:0004663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal viability following cellular response to methyl methanesulfonate","synonyms":[{"name":"normal cell population viability following cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal viability following MMS exposure","type":"exact"},{"name":"normal viability following cellular response to MMS","type":"exact"},{"name":"normal viability following cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0004663"}


id: MONDO:0010306
data:
  {"annotated_genes":["SJAG_01540"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87958],"is_not":false,"summary":null,"term":"MONDO:0010306"}]},"cv_name":"mondo","definition":"X-linked intellectual disability, Cabezas type is characterized by intellectual deficit, muscle wasting, short stature, a prominent lower lip, small testes, kyphosis and joint hyperextensibility. An abnormal gait, tremor, decreased fine motor coordination and impaired speech are also present. The syndrome has been described in six boys from three generations of the same family. Transmission is X-linked and the causative gene has been localized to the q24-q25 region of the X chromosome.","definition_xrefs":["Orphanet:85293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability, Cabezas type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060822","GARD:13244","MEDGEN:337334","UMLS:C1845861","OMIM:300354","SCTID:719811001"],"synonyms":[{"name":"Cabezas syndrome","type":"exact"},{"name":"Cabezas syndrome; syndromic X-linked intellectual disability 15","type":"exact"},{"name":"Cabezas syndrome; syndromic X-linked mental retardation 15","type":"exact"},{"name":"Cabezas type of X-linked syndromic intellectual disability","type":"related"},{"name":"Cul4B-related X-linked intellectual disability","type":"related"},{"name":"MRSS","type":"exact"},{"name":"MRXS15","type":"exact"},{"name":"MRXSC","type":"exact"},{"name":"X-linked intellectual disability with short stature","type":"exact"},{"name":"X-linked intellectual disability with short stature, hypogonadism, and abnormal gait","type":"exact"},{"name":"X-linked intellectual disability, Cabezas type","type":"exact"},{"name":"X-linked mental retardation with short stature","type":"exact"},{"name":"X-linked mental retardation with short stature, hypogonadism, and abnormal gait","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 15","type":"related"},{"name":"intellectual disability, X-linked, syndromic 15 (Cabezas type)","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Cabezas type","type":"related"},{"name":"intellectual disability, X-linked, with short stature","type":"exact"},{"name":"intellectual disability, X-linked, with short stature, hypogonadism, and abnormal Gait","type":"related"},{"name":"mental retardation, X-linked, syndromic 15","type":"related"},{"name":"mental retardation, X-linked, syndromic 15 (Cabezas type)","type":"exact"},{"name":"mental retardation, X-linked, syndromic 15 (Cabezas type), X-linked recessive","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Cabezas type","type":"related"},{"name":"mental retardation, X-linked, with short stature","type":"exact"},{"name":"mental retardation, X-linked, with short stature, hypogonadism, and abnormal Gait","type":"related"},{"name":"syndromic X-linked intellectual disability Cabezas type","type":"exact"}],"termid":"MONDO:0010306","terms_by_termid":{"MONDO:0010306":null},"xrefs":{"Monarch":{"xref_id":"0010306"}}}


id: PBO:0067124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 169, pseudogene","termid":"PBO:0067124"}


id: FYPO:0007016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the 3' ends of rRNA genes in ribosomal DNA repeat regions is increased.","definition_xrefs":["PomBase:mah","PMID:31294478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at rDNA","termid":"FYPO:0004032"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of rRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at 3' end of rRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of rRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of rRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of ribosomal RNA genes","type":"exact"},{"name":"increased protein localization to chromatin at rRNA genes at 3' end","type":"exact"}],"termid":"FYPO:0007016"}


id: GO:0090704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinate + UDP-D-glucose = O-D-glucosylnicotinate + UDP.","definition_xrefs":["GOC:tb","PMID:26116607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"nicotinate-O-glucosyltransferase activity","termid":"GO:0090704"}


id: MONDO:1012828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in rabbits due to a mutation in the ANO5 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, ANO5-related, rabbit","secondary_identifiers":["OMIA:002242-9986"],"termid":"MONDO:1012828","xrefs":{"Monarch":{"xref_id":"1012828"}}}


id: MONDO:1011889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial episodic spinocerebellar ataxia, non-human animal","secondary_identifiers":["OMIA:001723"],"termid":"MONDO:1011889","xrefs":{"Monarch":{"xref_id":"1011889"}}}


id: MONDO:0008021
data:
  {"annotated_genes":["SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87638],"is_not":false,"summary":null,"term":"MONDO:0008021"}]},"cv_name":"mondo","definition":"Any Cowden disease in which the cause of the disease is a mutation in the PTEN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"Cowden syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16450","OMIM:158350"],"synonyms":[{"name":"CS","type":"related"},{"name":"CWS1","type":"related"},{"name":"Cowden disease caused by mutation in PTEN","type":"exact"},{"name":"Cowden syndrome 1","type":"exact"},{"name":"Cowden syndrome type 1","type":"exact"},{"name":"Lhermitte-Duclos disease","type":"related"},{"name":"Lhermitte-Duclos syndrome","type":"exact"},{"name":"PTEN Cowden disease","type":"exact"},{"name":"Proteus-like syndrome","type":"related"},{"name":"cerebellar granule cell Hypertrophy and megalencephaly","type":"related"},{"name":"cerebelloparenchymal disorder 6","type":"related"},{"name":"dysplastic gangliocytoma of the cerebellum","type":"related"},{"name":"multiple hamartoma syndrome","type":"related"}],"termid":"MONDO:0008021","terms_by_termid":{"MONDO:0008021":null},"xrefs":{"Monarch":{"xref_id":"0008021"}}}


id: GO:0003091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Renal process involved in the maintenance of an internal steady state of water in the body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"multicellular organismal-level water homeostasis","termid":"GO:0050891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal water homeostasis","secondary_identifiers":["Reactome:R-HSA-432040"],"synonyms":[{"name":"water homeostasis by the renal system","type":"exact"}],"termid":"GO:0003091"}


id: MONDO:0017528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly of an index finger","termid":"MONDO:0008271"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of an index finger, bilateral","secondary_identifiers":["MEDGEN:1727346","icd11.foundation:806174152","Orphanet:295154","UMLS:C5438861"],"synonyms":[{"name":"preaxial polydactyly type 3, bilateral","type":"exact"}],"termid":"MONDO:0017528","xrefs":{"Monarch":{"xref_id":"0017528"}}}


id: RO:0001021
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a material entity and a condition (a phenotype or disease) of a host, in which the material entity is part of the host itself, and the condition results in pathological processes that include an abnormally strong immune response against the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_autoimmune_trigger_for","termid":"RO:0001021"}


id: GO:0032121
data:
  {"annotated_genes":["SJAG_01777","SJAG_05196","SJAG_03287","SJAG_05260","SJAG_03092"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89204,91588,101807,104720,107024],"is_not":false,"summary":null,"term":"GO:0032121"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle process in which physical connections are formed between telomeric heterochromatin and the spindle pole body, facilitating bouquet formation.","definition_xrefs":["GOC:pr","PMID:16615890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic telomere clustering","termid":"GO:0045141"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_05196":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"meiotic attachment of telomeric heterochromatin to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of telomeres to spindle pole body","type":"broad"},{"name":"attachment of telomeric chromatin to spindle pole body","type":"broad"}],"termid":"GO:0032121","terms_by_termid":{"GO:0032121":null}}


id: GO:0060560
data:
  {"annotated_genes":["SJAG_02169","SJAG_00244","SJAG_03581","SJAG_02392","SJAG_04509","SJAG_00514","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91688,96433,97708],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[89699,95863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[92552],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[117030],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"The increase in size or mass of an anatomical structure that contributes to the structure attaining its shape.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"developmental growth involved in morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"differential growth","type":"exact"}],"termid":"GO:0060560","terms_by_termid":{"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: PBO:0030973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation","termid":"PBO:0030973"}


id: PBO:0071851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 46","termid":"PBO:0071851"}


id: GO:0004814
data:
  {"annotated_genes":["SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78139],"is_not":false,"summary":null,"term":"GO:0004814"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).","definition_xrefs":["EC:6.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00653":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0140101","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"arginine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-380224","RHEA:20301","MetaCyc:ARGININE--TRNA-LIGASE-RXN","Reactome:R-HSA-379993"],"synonyms":[{"name":"L-arginine:tRNAArg ligase (AMP-forming)","type":"related"},{"name":"arginine translase activity","type":"related"},{"name":"arginine-tRNA synthetase activity","type":"related"},{"name":"arginyl transfer ribonucleic acid synthetase activity","type":"related"},{"name":"arginyl-tRNA synthetase activity","type":"exact"},{"name":"arginyl-transfer RNA synthetase activity","type":"related"},{"name":"arginyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004814","terms_by_termid":{"GO:0004814":null}}


id: MONDO:0005601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma that arises from the ovary and is characterized by the presence of malignant epithelial cells that contain intracytoplasmic mucin. There is cellular atypia, increased layering of cells, complexity of glands, and papillary formations.","definition_xrefs":["NCIT:C5243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"mucinous ovarian cancer","termid":"MONDO:0024282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian mucinous adenocarcinoma","secondary_identifiers":["EFO:0006462","icd11.foundation:869438441","DOID:3606","MEDGEN:235418","UMLS:C1335167","Orphanet:398961","GARD:21651"],"synonyms":[{"name":"mucinous adenocarcinoma of ovary","type":"exact"},{"name":"mucinous adenocarcinoma of the ovary","type":"exact"},{"name":"mucinous carcinoma of ovary","type":"exact"},{"name":"mucinous carcinoma of the ovary","type":"exact"},{"name":"ovarian mucinous adenocarcinoma","type":"exact"},{"name":"ovarian mucinous carcinoma","type":"exact"},{"name":"ovary mucinous adenocarcinoma","type":"exact"}],"termid":"MONDO:0005601","xrefs":{"Monarch":{"xref_id":"0005601"}}}


id: PBO:0073615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIDT1 antisense RNA 1","termid":"PBO:0073615"}


id: PBO:0011474
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of dextrin to glucose is 7.6 (mM min-1 ml-2)","termid":"PBO:0011474"}


id: GO:0033698
data:
  {"annotated_genes":["SJAG_00441","SJAG_02439","SJAG_00581","SJAG_00868","SJAG_03255","SJAG_03867","SJAG_02846","SJAG_04576","SJAG_03230","SJAG_03441","SJAG_04758","SJAG_02981","SJAG_01230"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61488,63667,64456,77592,77720,77911,79114,80761,82058,90928,96494,108676,116211],"is_not":false,"summary":null,"term":"GO:0033698"}]},"cv_name":"cellular_component","definition":"A histone deacetylase complex which deacetylates histones preferentially in promoter regions. Composed of a two copies of catalytic histone deacetylase subunit (S. pombe Clr6/ S. cerevisiae Rpd3p), an Sds-3 family protein (S. pombe /S. cerevisiae Sds3(p) ), two copies of SIN3 family co-repressor (S. pombe Pst1/ S. cerevisiae Sin3p, a WD repeat protein/ histone chaperone (S. pombe Prw1/ S. cerevisiae Ume1p), and a zf- PHD finger ( S. pombe Png2/ S. cerevisiae Pho23p), plus 4 additional subunits, and associated factors.","definition_xrefs":["GOC:vw","PMID:17450151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sin3-type complex","termid":"GO:0070822"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_01230":null,"SJAG_02439":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03867":null,"SJAG_04576":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005654","GO:0005694"],"is_obsolete":false,"name":"Rpd3L complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0000508"],"synonyms":[{"name":"Clr6 histone deacetylase complex I/I'","type":"exact"},{"name":"Clr6L complex","type":"exact"},{"name":"Rpd3C(L)","type":"exact"},{"name":"Sin3L complex","type":"exact"}],"termid":"GO:0033698","terms_by_termid":{"GO:0033698":null}}


id: GO:0098534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the assembly of one or more centrioles.","definition_xrefs":["GOC:dos","PMID:24075808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"centriole assembly","termid":"GO:0098534"}


id: GO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycourobilin to phycoerythrins.","definition_xrefs":["RESID:AA0260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycourobilin linkage","termid":"GO:0017010"}


id: MONDO:0021209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the heart.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"},{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"heart neoplasm","secondary_identifiers":["EFO:1001339","MEDGEN:9172","NANDO:2100061","UMLS:C0018809","NANDO:2200236","NCIT:C3081"],"synonyms":[{"name":"Cardiac neoplasm","type":"exact"},{"name":"Cardiac neoplasms","type":"exact"},{"name":"Cardiac tumor","type":"exact"},{"name":"Cardiac tumour","type":"exact"},{"name":"Intracavitary tumors","type":"related"},{"name":"Intracavitary tumours","type":"related"},{"name":"heart neoplasm (disease)","type":"exact"},{"name":"heart tumor","type":"exact"},{"name":"heart tumour","type":"exact"},{"name":"myocardial tumors (rhabdomyomas and fibromas)","type":"related"},{"name":"myocardial tumours (rhabdomyomas and fibromas)","type":"related"},{"name":"neoplasm of heart","type":"exact"},{"name":"neoplasm of the heart","type":"exact"},{"name":"primary cardiac tumors, childhood","type":"related"},{"name":"tumor of heart","type":"exact"},{"name":"tumor of the heart","type":"exact"},{"name":"tumour of heart","type":"exact"},{"name":"tumour of the heart","type":"exact"}],"termid":"MONDO:0021209","xrefs":{"Monarch":{"xref_id":"0021209"}}}


id: PBO:0053979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1291","termid":"PBO:0053979"}


id: MONDO:1012652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteochondromatosis that occurs in dogs due to a mutation in the EXT2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"osteochondromatosis, non-human animal","termid":"MONDO:1011972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondromatosis, EXT2-related, dog","secondary_identifiers":["OMIA:001214-9615"],"synonyms":[{"name":"diaphyseal aclasis and hereditary deforming chondrodysplasia, dog","type":"related"},{"name":"multiple cartilaginous exostoses, dog","type":"related"},{"name":"multiple hereditary exostoses, dog","type":"related"},{"name":"multiple osteochondromas, dog","type":"related"}],"termid":"MONDO:1012652","xrefs":{"Monarch":{"xref_id":"1012652"}}}


id: GO:0016032
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67028],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0075523"}]},"cv_name":"biological_process","definition":"A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.","definition_xrefs":["GOC:bf","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral process","references_by_uniquename":{"GO_REF:0000043":null},"secondary_identifiers":["Wikipedia:Viral_life_cycle","Reactome:R-HSA-162906","GO:0022415"],"synonyms":[{"name":"viral infection","type":"related"},{"name":"virulence","type":"related"},{"name":"virus process","type":"exact"}],"termid":"GO:0016032","terms_by_termid":{"GO:0075523":null}}


id: FYPO:0003744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to centromere during vegetative growth","termid":"FYPO:0000634"},{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to centromeric chromatin during vegetative growth","synonyms":[{"name":"abolished protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at centromere during vegetative growth","type":"exact"},{"name":"protein localization to centromeric chromatin during vegetative growth abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003744"}


id: PBO:0055993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limbic system associated membrane protein","termid":"PBO:0055993"}


id: PBO:0061261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like R","termid":"PBO:0061261"}


id: MONDO:0000869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital fibrosis of the extraocular muscles (obsolete MONDO:0000869)","termid":"MONDO:0000869","xrefs":{"Monarch":{"xref_id":"0000869"}}}


id: MONDO:0858986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant spastic paraplegia type 80 (obsolete MONDO:0858986)","termid":"MONDO:0858986","xrefs":{"Monarch":{"xref_id":"0858986"}}}


id: PBO:0001706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity factor Rax2","termid":"PBO:0001706"}


id: PBO:0034735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil protein involved in septum formation Rng10","termid":"PBO:0034735"}


id: PATO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000421 nutritional value (obsolete PATO:0000421)","termid":"PATO:0000421"}


id: PBO:0069793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1079, pseudogene","termid":"PBO:0069793"}


id: GO:0004779
data:
  {"annotated_genes":["SJAG_03475"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004781"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an adenylyl group from an adenosine nucleotide (ATP or ADP) to sulfate, forming adenylylsulfate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03475":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"sulfate adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"synonyms":[{"name":"sulphate adenylyltransferase activity","type":"exact"}],"termid":"GO:0004779","terms_by_termid":{"GO:0004781":null}}


id: GO:0102515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + 1-O-feruloyl-beta-D-glucose = pelargonidin 3,7-di-O-beta-D-glucoside + ferulate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pelargonidin 3-O-glucoside 7-O-glucosyltransferase (feruloyl-glucose dependent) activity (obsolete GO:0102515)","termid":"GO:0102515"}


id: MONDO:0009545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macroepiphyseal dysplasia with osteoporosis, wrinkled skin, and aged appearance","secondary_identifiers":["MEDGEN:419847","MESH:C537721","UMLS:C2931597","OMIM:248010"],"synonyms":[{"name":"Macroepiphyseal dysplasia, McAlister coe type","type":"related"},{"name":"McAlister coe Whyte syndrome","type":"related"},{"name":"macroepiphyseal dysplasia with osteoporosis, wrinkled skin, and aged appearance","type":"exact"}],"termid":"MONDO:0009545","xrefs":{"Monarch":{"xref_id":"0009545"}}}


id: PBO:0076036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 33","termid":"PBO:0076036"}


id: PBO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP binding enzyme (predicted)","termid":"PBO:0000542"}


id: GO:0050899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrile catabolic process","synonyms":[{"name":"nitrile breakdown","type":"exact"},{"name":"nitrile catabolism","type":"exact"},{"name":"nitrile degradation","type":"exact"}],"termid":"GO:0050899"}


id: GO:0004820
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74701],"is_not":false,"summary":null,"term":"GO:0004820"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).","definition_xrefs":["EC:6.1.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0140098","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"glycine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLYCINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380240","RHEA:16013","Reactome:R-HSA-380048"],"synonyms":[{"name":"glycine:tRNAGly ligase (AMP-forming) activity","type":"related"},{"name":"glycyl translase activity","type":"related"},{"name":"glycyl-tRNA synthetase activity","type":"exact"},{"name":"glycyl-transfer RNA synthetase activity","type":"related"},{"name":"glycyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"glycyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004820","terms_by_termid":{"GO:0004820":null}}


id: GO:0010654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an apical cell. The apical cell is the upper cell formed after the first division of the zygote.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"embryo development ending in seed dormancy","termid":"GO:0009793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical cell fate commitment","termid":"GO:0010654"}


id: PBO:0039047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL5 intronic transcript 1","termid":"PBO:0039047"}


id: MONDO:0033968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"immune dysregulation-inflammatory bowel disease-arthritis-recurrent infections-lymphopenia syndrome","secondary_identifiers":["UMLS:C5568533","GARD:22204","MEDGEN:1799956","Orphanet:529977"],"termid":"MONDO:0033968","xrefs":{"Monarch":{"xref_id":"0033968"}}}


id: GO:0045518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-22 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-22 receptor binding","synonyms":[{"name":"IL-22","type":"narrow"},{"name":"interleukin-22 receptor ligand","type":"narrow"}],"termid":"GO:0045518"}


id: PBO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculomotor apraxia 1","termid":"PBO:0010274"}


id: PBO:0089400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic meiotic pumilio family RNA-binding protein Mpf1","termid":"PBO:0089400"}


id: PBO:0079934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional SNARE in the ER 1","termid":"PBO:0079934"}


id: PR:P41389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11630:SF42","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.05","secondary_identifiers":["UniProtKB:P41389"],"synonyms":[{"name":"SPAC1B2.05","type":"related"},{"name":"Spom972h-MCM5","type":"exact"},{"name":"cell division control protein nda4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"minichromosome maintenance protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nda4","type":"related"}],"termid":"PR:P41389"}


id: PBO:0045091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX2 divergent transcript","termid":"PBO:0045091"}


id: PBO:0016529
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BouQueT","termid":"PBO:0016529"}


id: PBO:0061734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoredoxin like 1","termid":"PBO:0061734"}


id: PR:Q9C110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug177 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 177 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.15","synonyms":[{"name":"Spom972h-mug177","type":"exact"}],"termid":"PR:Q9C110"}


id: PBO:0040782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bet1 golgi vesicular membrane trafficking protein pseudogene 1","termid":"PBO:0040782"}


id: PATO:0000439
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000439 perseverative (obsolete PATO:0000439)","termid":"PATO:0000439"}


id: PBO:0029398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleoplasm","termid":"PBO:0029398"}


id: PBO:0069590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 864, pseudogene","termid":"PBO:0069590"}


id: GO:0010716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix disassembly","termid":"GO:0010715"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix organization","termid":"GO:1903054"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular matrix disassembly","synonyms":[{"name":"down regulation of extracellular matrix disassembly","type":"exact"},{"name":"down-regulation of extracellular matrix disassembly","type":"exact"},{"name":"downregulation of extracellular matrix disassembly","type":"exact"},{"name":"inhibition of extracellular matrix disassembly","type":"narrow"},{"name":"negative regulation of extracellular matrix breakdown","type":"exact"},{"name":"negative regulation of extracellular matrix degradation","type":"exact"}],"termid":"GO:0010716"}


id: MONDO:0054550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial avascular necrosis of femoral head","termid":"MONDO:0012126"},{"relation_name":"is_a","term_name":"dysplasia of the proximal femoral epiphyses","termid":"MONDO:1030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avascular necrosis of femoral head, primary, 1","secondary_identifiers":["MEDGEN:1639295","OMIM:608805","UMLS:C4551562"],"synonyms":[{"name":"ANFH1","type":"related"},{"name":"Femoral head, avascular necrosis of","type":"related"},{"name":"avascular necrosis of femoral head, primary, 1","type":"exact"},{"name":"avascular necrosis of the femoral head","type":"exact"},{"name":"femoral head, aseptic necrosis of","type":"related"},{"name":"ischaemic necrosis of femoral head","type":"related"},{"name":"ischemic necrosis of femoral head","type":"related"},{"name":"osteonecrosis of femoral head","type":"related"}],"termid":"MONDO:0054550","xrefs":{"Monarch":{"xref_id":"0054550"}}}


id: PBO:0066277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member A, pseudogene","termid":"PBO:0066277"}


id: PR:O14259
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfp47 gene.","definition_xrefs":["UniProtKB:O14259","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubp4-interactor sfp47 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.02c","synonyms":[{"name":"Spom972h-sfp47","type":"exact"}],"termid":"PR:O14259"}


id: PR:Q9P7J5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATPase family AAA domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04505","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C24B10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.10c","secondary_identifiers":["UniProtKB:Q9P7J5"],"synonyms":[{"name":"Spom972h-ATAD1","type":"exact"}],"termid":"PR:Q9P7J5"}


id: PBO:0005223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit/TATA-binding protein associated factor/transcription factor TFIID complex subunit Taf5","termid":"PBO:0005223"}


id: GO:1901010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving (S)-reticuline.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00306"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-reticuline metabolic process (obsolete GO:1901010)","synonyms":[{"name":"(S)-reticuline metabolism","type":"exact"}],"termid":"GO:1901010"}


id: PBO:0078101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 9","termid":"PBO:0078101"}


id: GO:1900631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tridecane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tridecane metabolic process","synonyms":[{"name":"tridecane metabolism","type":"exact"}],"termid":"GO:1900631"}


id: PR:P87130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim17-A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.16c","secondary_identifiers":["UniProtKB:P87130"],"synonyms":[{"name":"SPAC3A12.16c","type":"related"},{"name":"Spom972h-TIMM17A","type":"exact"},{"name":"mitochondrial protein import protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87130"}


id: PBO:0029216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cell_wall","termid":"PBO:0029216"}


id: MONDO:1012300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"displaced abomasum, non-human animal","termid":"MONDO:1011663"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced abomasum, sheep","secondary_identifiers":["OMIA:001119-9940"],"termid":"MONDO:1012300","xrefs":{"Monarch":{"xref_id":"1012300"}}}


id: PBO:0054958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2372","termid":"PBO:0054958"}


id: MONDO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dental caries that involves the enamel.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental caries","termid":"MONDO:0005276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enamel caries","secondary_identifiers":["MEDGEN:540214","SCTID:80353004","ICD9:521.01","UMLS:C0266853","DOID:217"],"synonyms":[{"name":"dental caries limited to enamel","type":"exact"},{"name":"dental caries of enamel","type":"exact"},{"name":"enamel dental caries","type":"exact"},{"name":"primary dental caries","type":"exact"},{"name":"simple dental cavity","type":"exact"}],"termid":"MONDO:0002233","xrefs":{"Monarch":{"xref_id":"0002233"}}}


id: MONDO:0045046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of thyroid hormone metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inherited thyroid metabolism disease","secondary_identifiers":["MEDGEN:543589","ICD9:246.8","UMLS:C0271824","SCTID:36985004"],"synonyms":[{"name":"inborn error of thyroid hormone metabolic process","type":"exact"},{"name":"inborn thyroid hormone metabolic process disorder","type":"exact"},{"name":"inherited disorder of thyroid metabolism","type":"exact"},{"name":"rare inborn error of thyroid hormone metabolic process","type":"exact"}],"termid":"MONDO:0045046","xrefs":{"Monarch":{"xref_id":"0045046"}}}


id: GO:0004143
data:
  {"annotated_genes":["SJAG_02429","SJAG_04883"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67785,99539],"is_not":false,"summary":null,"term":"GO:0004143"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycerol + ATP = a 1,2-diacyl-sn-glycero-3-phosphate + ADP + H+.","definition_xrefs":["GOC:elh","RHEA:10272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02429":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ATP-dependent diacylglycerol kinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DIACYLGLYKIN-RXN","Reactome:R-HSA-426240","EC:2.7.1.107"],"synonyms":[{"name":"DGK activity","type":"related"},{"name":"diacylglycerol kinase activity","type":"broad"},{"name":"diacylglycerol kinase activity (ATP)","type":"exact"},{"name":"diglyceride kinase activity","type":"broad"}],"termid":"GO:0004143","terms_by_termid":{"GO:0004143":null}}


id: FYPO:0003277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more microtubules does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during vegetative growth","termid":"FYPO:0003269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to microtubule during mitosis","synonyms":[{"name":"abolished protein localisation to microtubule during mitosis","type":"exact"},{"name":"abolished protein localization to microtubule during mitosis during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to microtubule during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to microtubule during mitotic M phase","type":"related"},{"name":"abolished protein localization to microtubule during mitotic nuclear division","type":"exact"},{"name":"protein absent from microtubule during mitosis","type":"related"},{"name":"protein localization to microtubule abolished during mitosis","type":"exact"}],"termid":"FYPO:0003277"}


id: GO:0032155
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cell division plane, the eventual plane of cell division in a dividing cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cell division site part (obsolete GO:0032155)","synonyms":[{"name":"cell division plane part","type":"exact"}],"termid":"GO:0032155"}


id: GO:1902788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isooctane stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22328008","GO_REF:0000071","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isooctane","termid":"GO:1902788"}


id: MONDO:0015548
data:
  {"annotated_genes":["SJAG_16459","SJAG_00421","SJAG_01229","SJAG_01317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87275,87274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008695"},{"annotations":[87576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[89078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease and related disorders","termid":"MONDO:0000167"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_01229":null,"SJAG_01317":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Huntington disease-like syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:777988","ICD9:333.99","Orphanet:158266","SCTID:702376003","UMLS:C3711380","GARD:20029","MESH:C580174"],"synonyms":[{"name":"Huntington disease phenocopy syndrome","type":"exact"}],"termid":"MONDO:0015548","terms_by_termid":{"MONDO:0008458":null,"MONDO:0008695":null,"MONDO:0011781":null},"xrefs":{"Monarch":{"xref_id":"0015548"}}}


id: GO:0015367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: oxoglutarate(out) + malate(in) = oxoglutarate(in) + malate(out).","definition_xrefs":["TC:2.A.29.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transmembrane transporter activity","termid":"GO:0015139"},{"relation_name":"is_a","term_name":"malate transmembrane transporter activity","termid":"GO:0015140"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"oxoglutarate:malate antiporter activity","secondary_identifiers":["Reactome:R-HSA-376851","Reactome:R-HSA-198440"],"synonyms":[{"name":"2-oxoglutarate/malate carrier protein","type":"exact"}],"termid":"GO:0015367"}


id: GO:1903551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extracellular vesicular exosome assembly.","definition_xrefs":["GO_REF:0000058","PMID:24105262","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"extracellular exosome assembly","termid":"GO:0071971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of extracellular exosome assembly","synonyms":[{"name":"regulation of extracellular vesicular exosome assembly","type":"exact"}],"termid":"GO:1903551"}


id: PBO:0043904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein LCCL domain containing 1","termid":"PBO:0043904"}


id: MONDO:0957993
data:
  {"annotated_genes":["SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87874],"is_not":false,"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0002320","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial dna deletions, autosomal recessive 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1847098","OMIM:620647","UMLS:C5882731"],"termid":"MONDO:0957993","terms_by_termid":{"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0957993"}}}


id: PBO:0047024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A27, pseudogene","termid":"PBO:0047024"}


id: MONDO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lower than normal levels of phosphates in the circulating blood.","definition_xrefs":["NCIT:C37977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolism disease","termid":"MONDO:0002319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypophosphatemia","secondary_identifiers":["DOID:0050336","MEDGEN:39327","SCTID:4996001","HP:0002148","MESH:D017674","UMLS:C0085682"],"synonyms":[{"name":"hypophosphatemia","type":"exact"},{"name":"hypophosphatemia (disease)","type":"exact"}],"termid":"MONDO:0000313","xrefs":{"Monarch":{"xref_id":"0000313"}}}


id: PBO:0048214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit rho1","termid":"PBO:0048214"}


id: SO:0002383
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that has been found to be pathogenic in the context of a neoplastic disease.","definition_xrefs":["PMID:35101336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disease_associated_variant","termid":"SO:0001771"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncogenic_variant","termid":"SO:0002383"}


id: PBO:0052926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-9, pseudogene","termid":"PBO:0052926"}


id: MONDO:0850371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A coronary artery disease that is characterized by atherosclerotic plaque that would not be expected to obstruct blood flow or result in anginal symptoms and stenosis of coronary artery less than 50 percent.","definition_xrefs":["DOID:0080938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"nonobstructive coronary artery disease","termid":"MONDO:0850371","xrefs":{"Monarch":{"xref_id":"0850371"}}}


id: PBO:0029833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endomembrane_system","termid":"PBO:0029833"}


id: PBO:0061951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 3 pseudogene","termid":"PBO:0061951"}


id: PR:Q9URT2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tho1 gene.","definition_xrefs":["UniProtKB:Q9URT2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P25A2.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP25A2.03","synonyms":[{"name":"Spom972h-tho1","type":"exact"}],"termid":"PR:Q9URT2"}


id: PBO:0080330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 94 pseudogene","termid":"PBO:0080330"}


id: FYECO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which antimycin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ antimycin A","synonyms":[{"name":"respiratory chain inhibitor","type":"related"}],"termid":"FYECO:0000143"}


id: PBO:0089837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L25","termid":"PBO:0089837"}


id: PBO:0044948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 3","termid":"PBO:0044948"}


id: PBO:0055289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2716","termid":"PBO:0055289"}


id: PBO:0082759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; essential protein required for splicing and for assembly of SF3b","termid":"PBO:0082759"}


id: PBO:0056449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3 pseudogene 1","termid":"PBO:0056449"}


id: PBO:0090793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone Pac3","termid":"PBO:0090793"}


id: MONDO:0100117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of sudden cardiac death that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"gene_count":0,"genotype_count":0,"name":"obsolete familial sudden death (obsolete MONDO:0100117)","synonyms":[{"name":"familial sudden death syndrome","type":"exact"}],"termid":"MONDO:0100117","xrefs":{"Monarch":{"xref_id":"0100117"}}}


id: MONDO:0003695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon benign neoplasm of glandular epithelium characterized by the presence of clear or hobnail cells within a dense fibrous stroma.","definition_xrefs":["NCIT:C40085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"clear cell adenofibroma","termid":"MONDO:0003460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian clear cell adenofibroma","secondary_identifiers":["MEDGEN:309502","DOID:5897","UMLS:C1518694"],"synonyms":[{"name":"clear cell adenofibroma of ovary","type":"exact"},{"name":"ovarian clear cell adenofibroma","type":"exact"},{"name":"ovary clear cell adenofibroma","type":"exact"}],"termid":"MONDO:0003695","xrefs":{"Monarch":{"xref_id":"0003695"}}}


id: PBO:0046236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 30","termid":"PBO:0046236"}


id: GO:1990251
data:
  {"annotated_genes":["SJAG_04768","SJAG_04006","SJAG_02720","SJAG_02622","SJAG_03745","SJAG_04601","SJAG_01867","SJAG_00961"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89293,93699,94075,95282,106202,109382,113258,120108],"is_not":false,"summary":null,"term":"GO:1990251"}]},"cv_name":"cellular_component","definition":"An nuclear body involved in nuclear mRNA surveilllance. Contains at least Mmi1, or an ortholog of it, and the nuclear exosome.","definition_xrefs":["PMID:16823445","GOC:vw","PMID:23980030","PMID:32012158","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00961":null,"SJAG_01867":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04601":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"nuclear exosome focus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mmi1 nuclear focus","type":"exact"},{"name":"nuclear body","type":"related"}],"termid":"GO:1990251","terms_by_termid":{"GO:1990251":null}}


id: PBO:0030981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030981"}


id: PBO:0027801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_JM335","termid":"PBO:0027801"}


id: MONDO:0013430
data:
  {"annotated_genes":["SJAG_01267"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88712],"is_not":false,"summary":null,"term":"MONDO:0013430"}]},"cv_name":"mondo","definition":"Any Meier-Gorlin syndrome in which the cause of the disease is a mutation in the ORC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01267":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613803","UMLS:C3151113","DOID:0080514","MEDGEN:462463","GARD:15710"],"synonyms":[{"name":"MGORS3","type":"related"},{"name":"Meier-GORLIN syndrome 3","type":"related"},{"name":"Meier-Gorlin syndrome 3","type":"exact"},{"name":"Meier-Gorlin syndrome caused by mutation in ORC6","type":"exact"},{"name":"Meier-Gorlin syndrome type 3","type":"exact"},{"name":"ORC6 Meier-Gorlin syndrome","type":"exact"}],"termid":"MONDO:0013430","terms_by_termid":{"MONDO:0013430":null},"xrefs":{"Monarch":{"xref_id":"0013430"}}}


id: PBO:0090602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase Tal1","termid":"PBO:0090602"}


id: FYPO:0004906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PomBase:mah","PMID:23314747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of histone gene mRNA during vegetative growth","synonyms":[{"name":"decreased histone gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of histone gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of histone gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of histone gene transcripts during vegetative growth","type":"exact"},{"name":"reduced level of histone gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004906"}


id: PBO:0003723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphate aldolase Fba1","termid":"PBO:0003723"}


id: GO:0032587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a ruffle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"ruffle","termid":"GO:0001726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"ruffle membrane","synonyms":[{"name":"membrane ruffle","type":"related"}],"termid":"GO:0032587"}


id: MONDO:0001391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A leprosy that is an early form of the disease which causes one to a few hypopigmented or erythematous macules.","definition_xrefs":["DOID:11851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leprosy","termid":"MONDO:0005124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indeterminate leprosy","secondary_identifiers":["ICD10CM:A30.0","ICD9:030.2","UMLS:C0021192","MEDGEN:507841","SCTID:14386001","icd11.foundation:2010059430"],"synonyms":[{"name":"indeterminate leprosy [group I]","type":"exact"},{"name":"uncharacteristic leprosy","type":"exact"}],"termid":"MONDO:0001391","xrefs":{"Monarch":{"xref_id":"0001391"}}}


id: MONDO:0001395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular keratitis","secondary_identifiers":["MEDGEN:509772","icd11.foundation:1283506871","SCTID:2853006","UMLS:C0155076","ICD9:370.22","DOID:11871"],"termid":"MONDO:0001395","xrefs":{"Monarch":{"xref_id":"0001395"}}}


id: MONDO:0016462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated agammaglobulinemia (IA) is the non-syndromic form of agammaglobulinemia, a primary immunodeficiency disease, and is characterized by deficient gamma globulins and associated predisposition to frequent and recurrent infections from infancy.","definition_xrefs":["Orphanet:229717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"isolated agammaglobulinemia","secondary_identifiers":["GARD:17155","SCTID:764858009","UMLS:C4707181","MEDGEN:1639972"],"synonyms":[{"name":"isolated hypogammaglobulinemia","type":"exact"},{"name":"nonsyndromic agammaglobulinemia","type":"exact"}],"termid":"MONDO:0016462","xrefs":{"Monarch":{"xref_id":"0016462"}}}


id: GO:0046573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of lactone rings (intramolecular cyclic esters) to produce a hydroxyl group and a carboxyl group.","definition_xrefs":["PMID:11640988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"lactonohydrolase activity","termid":"GO:0046573"}


id: RO:0002526
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x overlaps the sequence of x if and only if x has a subsequence z and z is a subsequence of y.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlaps_sequence_of","termid":"RO:0002526"}


id: GO:0045437
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92484],"is_not":false,"summary":null,"term":"GO:0045437"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + uridine = ribofuranose + uracil.","definition_xrefs":["EC:3.2.2.3","RHEA:15577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosylpyrimidine nucleosidase activity","termid":"GO:0050263"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"uridine nucleosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:URIDINE-NUCLEOSIDASE-RXN","KEGG_REACTION:R01080"],"synonyms":[{"name":"uridine hydrolase activity","type":"exact"},{"name":"uridine ribohydrolase activity","type":"related"}],"termid":"GO:0045437","terms_by_termid":{"GO:0045437":null}}


id: MONDO:0016330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hypertrophic cardiomyopathy that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy","termid":"MONDO:0005045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"non-familial hypertrophic cardiomyopathy","secondary_identifiers":["MEDGEN:1843178","Orphanet:217598","UMLS:C5680883"],"synonyms":[{"name":"acquired hypertrophic cardiomyopathy","type":"exact"}],"termid":"MONDO:0016330","xrefs":{"Monarch":{"xref_id":"0016330"}}}


id: GO:0002735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dendritic cell cytokine production","termid":"GO:0002732"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell cytokine production","termid":"GO:0002733"},{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte cytokine production involved in immune response","termid":"GO:0061081"},{"relation_name":"positively_regulates","term_name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid dendritic cell cytokine production","synonyms":[{"name":"activation of myeloid dendritic cell cytokine production","type":"narrow"},{"name":"stimulation of myeloid dendritic cell cytokine production","type":"narrow"},{"name":"up regulation of myeloid dendritic cell cytokine production","type":"exact"},{"name":"up-regulation of myeloid dendritic cell cytokine production","type":"exact"},{"name":"upregulation of myeloid dendritic cell cytokine production","type":"exact"}],"termid":"GO:0002735"}


id: PBO:0049466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin E (MNS blood group)","termid":"PBO:0049466"}


id: GO:0097133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D3 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D3-CDK6 complex","termid":"GO:0097133"}


id: GO:0007427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells during development of an open tracheal system. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration, open tracheal system","synonyms":[{"name":"tracheal cell migration","type":"broad"},{"name":"tracheal epithelial cell migration","type":"related"}],"termid":"GO:0007427"}


id: PBO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A","termid":"PBO:0001637"}


id: MONDO:0800475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder caused by heterozygous variants in NACC1 and characterized by developmental delay, intellectual disability, epilepsy, cataracts, feeding difficulties, and recurring episodes of extreme irritability. Other phenotypes include hypotonia, delayed myelination, microcephaly, stereotypic hand movements, gastrointestinal tract issues, and sleeping problems.","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"NACC1-related neurodevelopmental disorder with epilepsy, cataracts and episodic irritability","synonyms":[{"name":"NACC1-related neurodevelopmental disorder with epilepsy, cataracts and episodic irritability","type":"exact"}],"termid":"MONDO:0800475","xrefs":{"Monarch":{"xref_id":"0800475"}}}


id: PBO:0074526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C2","termid":"PBO:0074526"}


id: GO:0160222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-alanine + D-serine = ADP + D-alanyl-D-serine + H+ + phosphate.","definition_xrefs":["EC:6.3.2.35","RHEA:27706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"D-alanine-D-serine ligase activity","secondary_identifiers":["KEGG_REACTION:R09595","MetaCyc:RXN-11299"],"termid":"GO:0160222"}


id: MONDO:0013582
data:
  {"annotated_genes":["SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87743],"is_not":false,"summary":null,"term":"MONDO:0013582"}]},"cv_name":"mondo","definition":"Any mosaic variegated aneuploidy syndrome in which the cause of the disease is a mutation in the CEP57 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02795":null},"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:481473","GARD:15758","NCIT:C168989","UMLS:C3279843","OMIM:614114","DOID:0080142"],"synonyms":[{"name":"CEP57 mosaic variegated aneuploidy syndrome","type":"exact"},{"name":"MOSAIC variegated aneuploidy syndrome 2","type":"related"},{"name":"MVA2","type":"related"},{"name":"Mosaic variegated aneuploidy syndrome type 2","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome 2","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome caused by mutation in CEP57","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome type 2","type":"exact"}],"termid":"MONDO:0013582","terms_by_termid":{"MONDO:0013582":null},"xrefs":{"Monarch":{"xref_id":"0013582"}}}


id: PBO:0041237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 94","termid":"PBO:0041237"}


id: PBO:0089099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1 substrate adaptor, WD repeat protein, Raptor homolog Mip1","termid":"PBO:0089099"}


id: MONDO:0013614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertelorism-preauricular sinus-punctual pits-deafness syndrome","secondary_identifiers":["GARD:17351","OMIM:614187","UMLS:C4751125","MEDGEN:1659106","Orphanet:293958"],"synonyms":[{"name":"HPPD","type":"exact"},{"name":"hypertelorism, preauricular sinus, punctal pits, and deafness","type":"related"},{"name":"hypertelorism-preauricular sinus-punctual pits-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0013614","xrefs":{"Monarch":{"xref_id":"0013614"}}}


id: FYPO:0002089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which exocytosis is abnormal. Exocytosis is the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. A phenotype may affect exocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["GO:0006887","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"},{"relation_name":"is_a","term_name":"abnormal exocytosis","termid":"FYPO:0007873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal exocytosis during vegetative growth","synonyms":[{"name":"abnormal exocytosis during mitotic cell cycle","type":"related"},{"name":"exocytosis defects during vegetative growth","type":"exact"}],"termid":"FYPO:0002089"}


id: GO:2001005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of pectin catabolic process","termid":"GO:2001003"},{"relation_name":"positively_regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of pectin catabolic process","synonyms":[{"name":"positive regulation of pectin breakdown","type":"exact"},{"name":"positive regulation of pectin catabolism","type":"exact"},{"name":"positive regulation of pectin degradation","type":"exact"}],"termid":"GO:2001005"}


id: PBO:0054259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1644","termid":"PBO:0054259"}


id: MONDO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pleural cancer","termid":"MONDO:0006294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant visceral pleura tumor","secondary_identifiers":["MEDGEN:509311","UMLS:C0153496","DOID:14033","SCTID:94140004"],"synonyms":[{"name":"primary malignant neoplasm of visceral pleura","type":"exact"}],"termid":"MONDO:0001862","xrefs":{"Monarch":{"xref_id":"0001862"}}}


id: PBO:0069509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 777, pseudogene","termid":"PBO:0069509"}


id: PBO:0000163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantoate-beta-alanine ligase","termid":"PBO:0000163"}


id: FYPO:0005673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ubiquitinated protein measured the cell is lower than normal during a cellular response to methyl methanesulfonate. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during cellular response to methyl methanesulfonate","termid":"FYPO:0003143"},{"relation_name":"is_a","term_name":"decreased level of ubiquitinated protein in cell","termid":"FYPO:0005226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased accumulation of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during cellular response to MMS","type":"exact"},{"name":"decreased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased level of ubiquitylated protein in cell during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased ubiquitinated protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"reduced level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005673"}


id: PR:O59763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- oca2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase oca2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.10","synonyms":[{"name":"Spom972h-oca2","type":"exact"}],"termid":"PR:O59763"}


id: MONDO:1012672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lysosomal storage disorder that occurs in cattle due to a mutation in the NAGLU gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis IIIB, cattle","secondary_identifiers":["OMIA:001342-9913"],"synonyms":[{"name":"Sanfilippo syndrome type B, cattle","type":"related"}],"termid":"MONDO:1012672","xrefs":{"Monarch":{"xref_id":"1012672"}}}


id: FYPO:0006772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which actin cortical patches are localized throughout the cell cortex during mating. Normally, actin cortical patches concentrate in the mating projection tip and conjugation bridge during cell fusion, and then disperse after karyogamy.","definition_xrefs":["PomBase:mah","PMID:20123972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actin cortical patches","termid":"FYPO:0006771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"dispersed actin cortical patch localization during mating","synonyms":[{"name":"delocalised actin cortical patches during mating","type":"exact"},{"name":"delocalized actin cortical patches during mating","type":"exact"},{"name":"depolarized actin cortical patch localization during mating","type":"exact"},{"name":"dispersed F-actin patch localization during mating","type":"exact"},{"name":"dispersed actin cortical patch localisation during mating","type":"exact"},{"name":"dispersed actin cortical patch localization during conjugation with cellular fusion","type":"exact"},{"name":"dispersed actin cortical patch location during mating","type":"related"},{"name":"dispersed actin patch localization during mating","type":"exact"}],"termid":"FYPO:0006772"}


id: PBO:0113539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein; involved in oxidative stress response and modulation of replicative lifespan; targeted to vacuole via AP-3 pathway; undergoes autophosphorylation, which is abolished by mutation of Asp781 in catalytic motif (D781N); P5 ATPase subfamily member with similarity to yeast Spf1p and homology to human ATP13A2 (PARK9), mutations in which are associated with Parkinson disease and Kufor-Rakeb syndrome","termid":"PBO:0113539"}


id: GO:0042898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fosmidomycin, a phosphonic acid derivative with potent activity against Gram-negative organisms, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","PMID:12543685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"fosmidomycin transmembrane transporter activity","synonyms":[{"name":"fosmidomycin transporter activity","type":"related"}],"termid":"GO:0042898"}


id: PBO:0078105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPPC12 antisense RNA 1","termid":"PBO:0078105"}


id: CHEBI:15379
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioxygen","termid":"CHEBI:15379"}


id: PATO:0002265
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality of a process inhering in a bearer by virtue of the bearer's disposition to exhibit marked activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioural activity","termid":"PATO:0002265"}


id: PBO:0065122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCZ divergent transcript","termid":"PBO:0065122"}


id: GO:0097432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a hippocampal pyramidal neuron, a pyramidal cell of the hippocampus.","definition_xrefs":["GOC:jc","CL:1001571","PMID:19342486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyramidal neuron differentiation","termid":"GO:0021859"},{"relation_name":"is_a","term_name":"cerebral cortex neuron differentiation","termid":"GO:0021895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hippocampal pyramidal neuron differentiation","termid":"GO:0097432"}


id: PBO:0069487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 754, pseudogene","termid":"PBO:0069487"}


id: PBO:0056522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBTPS1 divergent transcript","termid":"PBO:0056522"}


id: PBO:0078495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon GAT) 1-2","termid":"PBO:0078495"}


id: PR:P36582
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pck1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C-like 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.14c","synonyms":[{"name":"Spom972h-pck1","type":"exact"}],"termid":"PR:P36582"}


id: PBO:0049648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 2","termid":"PBO:0049648"}


id: GO:0030426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The migrating motile tip of a growing neuron projection, where actin accumulates, and the actin cytoskeleton is the most dynamic.","definition_xrefs":["ISBN:0815316194","GOC:aruk","PMID:10082468","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"part_of","term_name":"distal axon","termid":"GO:0150034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone","secondary_identifiers":["Wikipedia:Growth_cone"],"termid":"GO:0030426"}


id: PBO:0047854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(q25.1)","termid":"PBO:0047854"}


id: GO:0002322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a B cell population by cell division following B cell activation during an immune response.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell activation involved in immune response","termid":"GO:0002312"},{"relation_name":"is_a","term_name":"B cell proliferation","termid":"GO:0042100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell proliferation involved in immune response","synonyms":[{"name":"B cell proliferation during immune response","type":"related"},{"name":"B lymphocyte proliferation during immune response","type":"related"},{"name":"B-cell proliferation during immune response","type":"related"},{"name":"B-lymphocyte proliferation during immune response","type":"related"}],"termid":"GO:0002322"}


id: PBO:0047710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 1","termid":"PBO:0047710"}


id: PBO:0078309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (GTC) 5-1","termid":"PBO:0078309"}


id: PR:O74798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2D10.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related trafficking adapter C2D10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.04","synonyms":[{"name":"Spom972h-SPBC2D10.04","type":"exact"}],"termid":"PR:O74798"}


id: PBO:0076126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine/tyrosine interacting protein","termid":"PBO:0076126"}


id: GO:1901667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of satellite cell activation involved in skeletal muscle regeneration.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:21272575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014717"},{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle tissue regeneration","termid":"GO:0043417"},{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"negatively_regulates","term_name":"satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle satellite cell activation involved in skeletal muscle regeneration","synonyms":[{"name":"down regulation of satellite cell activation involved in skeletal muscle regeneration","type":"exact"},{"name":"down-regulation of satellite cell activation involved in skeletal muscle regeneration","type":"exact"},{"name":"downregulation of satellite cell activation involved in skeletal muscle regeneration","type":"exact"},{"name":"inhibition of satellite cell activation involved in skeletal muscle regeneration","type":"narrow"}],"termid":"GO:1901667"}


id: PBO:0081850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 783","termid":"PBO:0081850"}


id: GO:0016977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of beta-1,4-linkages between N-acetyl-D-glucosamine and D-glucosamine residues in a partly acetylated chitosan.","definition_xrefs":["EC:3.2.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"chitosanase activity","secondary_identifiers":["MetaCyc:3.2.1.132-RXN"],"synonyms":[{"name":"chitosan N-acetylglucosaminohydrolase activity","type":"related"}],"termid":"GO:0016977"}


id: GO:0061000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of dendritic spine development","termid":"GO:0060998"},{"relation_name":"negatively_regulates","term_name":"dendritic spine development","termid":"GO:0060996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic spine development","termid":"GO:0061000"}


id: PBO:0042118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 190","termid":"PBO:0042118"}


id: PBO:0090991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taz1-like protein","termid":"PBO:0090991"}


id: PBO:0085605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in control of cell wall structure and stress response; direct inhibitor of the nuclear Dbf2 related (NDR) kinase Cbk1p-Mob2p; overproduction confers resistance to cell-wall degrading enzymes; exhibits genetic interactions with genes involved in the cell wall integrity pathway; LRE1 has a paralog, HLR1, that arose from the whole genome duplication","termid":"PBO:0085605"}


id: GO:0010650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"},{"relation_name":"positively_regulates","term_name":"cell communication by electrical coupling","termid":"GO:0010644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell communication by electrical coupling","termid":"GO:0010650"}


id: MONDO:1012031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital blindness, non-human animal","termid":"MONDO:1011975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital blindness, pig","secondary_identifiers":["OMIA:000115-9823"],"termid":"MONDO:1012031","xrefs":{"Monarch":{"xref_id":"1012031"}}}


id: GO:0034584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a piRNA, a Piwi-associated RNA, a 24- to 30-nucleotide RNA derived from repeat or complex DNA sequence elements and processed by a Dicer-independent mechanism.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory RNA binding","termid":"GO:0061980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"piRNA binding","synonyms":[{"name":"Piwi-associated RNA binding","type":"exact"}],"termid":"GO:0034584"}


id: GO:0035121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of the tail are generated and organized. The tail is the hindmost part of some animals.","definition_xrefs":["ISBN:0198612001"],"gene_count":0,"genotype_count":0,"name":"obsolete tail morphogenesis (obsolete GO:0035121)","synonyms":[{"name":"tail morphogenesis","type":"exact"}],"termid":"GO:0035121"}


id: GO:0075321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the development of an oomycete sporangium, a single-celled or many-celled structure that germinates directly to form an infection hypha or differentiates, through specialized cleavage vesicles, into between 10 and 30 zoospores, which are laterally flagellated.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"},{"relation_name":"is_a","term_name":"sporangium development","termid":"GO:0043582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oomycete sporangium development","termid":"GO:0075321"}


id: PBO:0083104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase involved in rDNA replication and Ty1 transposition; binds to and suppresses DNA damage at G4 motifs in vivo; relieves replication fork pauses at telomeric regions; structurally and functionally related to Pif1p","termid":"PBO:0083104"}


id: PBO:0076543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taspase 1","termid":"PBO:0076543"}


id: PBO:0057232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 411","termid":"PBO:0057232"}


id: GO:1901998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a toxin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:17118486","GOC:dph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete toxin transport (obsolete GO:1901998)","termid":"GO:1901998"}


id: GO:0015757
data:
  {"annotated_genes":["SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"}]},"cv_name":"biological_process","definition":"The process in which galactose is transported across a lipid bilayer, from one side of a membrane to the other. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00057":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"galactose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactose transport","type":"related"}],"termid":"GO:0015757","terms_by_termid":{"GO:0140425":null}}


id: GO:0140751
data:
  {"annotated_genes":["SJAG_02698","SJAG_01878","SJAG_01938","SJAG_03982","SJAG_05313","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74641,72073,81748,115271,75116,74009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140750"}]},"cv_name":"molecular_function","definition":"A chromatin remodeler activity that slides core histone octamers along chromosomal DNA.","definition_xrefs":["PMID:10466730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent chromatin remodeler activity","termid":"GO:0140658"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01878":null,"SJAG_01938":null,"SJAG_02698":null,"SJAG_03982":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"histone octamer slider activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"histone octamer sliding activity","type":"exact"}],"termid":"GO:0140751","terms_by_termid":{"GO:0140750":null}}


id: GO:0098900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["ISBN:978-0-07-139011-8","GOC:tb","GOC:dph","GOC:dos","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of action potential","termid":"GO:0098900"}


id: GO:1900105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hyaluranon cable assembly.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of hyaluranon cable assembly","termid":"GO:1900104"},{"relation_name":"negatively_regulates","term_name":"hyaluranon cable assembly","termid":"GO:0036118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hyaluranon cable assembly","synonyms":[{"name":"down regulation of HA cable assembly","type":"exact"},{"name":"down regulation of hyaluranon cable assembly","type":"exact"},{"name":"down-regulation of HA cable assembly","type":"exact"},{"name":"down-regulation of hyaluranon cable assembly","type":"exact"},{"name":"downregulation of HA cable assembly","type":"exact"},{"name":"downregulation of hyaluranon cable assembly","type":"exact"},{"name":"inhibition of HA cable assembly","type":"exact"},{"name":"inhibition of hyaluranon cable assembly","type":"narrow"},{"name":"negative regulation of HA cable assembly","type":"exact"}],"termid":"GO:1900105"}


id: PBO:0050278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor HB-1","termid":"PBO:0050278"}


id: PBO:0015253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg1 (predicted)","termid":"PBO:0015253"}


id: PBO:0053416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 354","termid":"PBO:0053416"}


id: PR:G2TRR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.32 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.32","synonyms":[{"name":"Spom972h-SPBP8B7.32","type":"exact"}],"termid":"PR:G2TRR5"}


id: GO:0048632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle growth.","definition_xrefs":["PMID:15726494","GOC:lm","PMID:15907921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue growth","termid":"GO:0048631"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle tissue growth","termid":"GO:0048630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle tissue growth","synonyms":[{"name":"down regulation of skeletal muscle growth","type":"exact"},{"name":"down-regulation of skeletal muscle growth","type":"exact"},{"name":"downregulation of skeletal muscle growth","type":"exact"},{"name":"inhibition of skeletal muscle growth","type":"narrow"}],"termid":"GO:0048632"}


id: PBO:0070223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 156 pseudogene","termid":"PBO:0070223"}


id: MONDO:1012774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive cerebellar ataxia that occurs in dogs due to a mutation in the SNX14 gene.","definition_xrefs":["PMID:27566131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical degeneration, SNX14-related, dog","secondary_identifiers":["OMIA:002034-9615"],"termid":"MONDO:1012774","xrefs":{"Monarch":{"xref_id":"1012774"}}}


id: GO:0016159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-muconolactone = (4,5-dihydro-5-oxofuran-2-yl)-acetate.","definition_xrefs":["RHEA:12348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"muconolactone delta-isomerase activity","secondary_identifiers":["MetaCyc:MUCONOLACTONE-DELTA-ISOMERASE-RXN","EC:5.3.3.4"],"synonyms":[{"name":"5-oxo-4,5-dihydrofuran-2-acetate delta3-delta2-isomerase activity","type":"related"},{"name":"muconolactone D-isomerase activity","type":"exact"},{"name":"muconolactone isomerase activity","type":"related"}],"termid":"GO:0016159"}


id: MONDO:0022965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I large cystic tumor that occurs almost exclusively in infants, with a prominent desmoplastic stroma having a neuroepithelial population of neoplastic astrocytes together with a variable neuronal component. It involves the superficial cerebral cortex and leptomeninges, and often attaches to the dura. Although clinically it presents as a large tumor, it generally has a good prognosis following surgical resection. (Adapted from WHO)","definition_xrefs":["NCIT:C4738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoplastic infantile ganglioglioma","secondary_identifiers":["GARD:8648","ONCOTREE:DIG","DOID:0081259","MEDGEN:231168","UMLS:C1321878"],"synonyms":[{"name":"DIG","type":"exact"},{"name":"Desmoplastic infantile ganglioglioma","type":"exact"}],"termid":"MONDO:0022965","xrefs":{"Monarch":{"xref_id":"0022965"}}}


id: PBO:0083543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ribosomal protein gene RPL21A/YBR191W","termid":"PBO:0083543"}


id: PBO:0048938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated PDZ and coiled-coil motif containing","termid":"PBO:0048938"}


id: PBO:0110465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 5","termid":"PBO:0110465"}


id: PBO:0040204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astacin like metalloendopeptidase","termid":"PBO:0040204"}


id: PBO:0086676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RDN5-4; YLR157C-C has a paralog, YLR154C-H, that arose from a segmental duplication","termid":"PBO:0086676"}


id: PBO:0080324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 88 pseudogene","termid":"PBO:0080324"}


id: PATO:0000294
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000294 process value (obsolete PATO:0000294)","termid":"PATO:0000294"}


id: PBO:0048077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain like 17","termid":"PBO:0048077"}


id: GO:0005031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death receptor activity","termid":"GO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"tumor necrosis factor receptor activity","secondary_identifiers":["GO:0005032","GO:0005033"],"synonyms":[{"name":"NGF/TNF (6 C-domain) receptor activity","type":"narrow"},{"name":"TNF receptor activity","type":"exact"},{"name":"TNF receptor activity, type I","type":"narrow"},{"name":"TNF receptor activity, type II","type":"narrow"},{"name":"tumor necrosis factor receptor activity, type I","type":"narrow"},{"name":"tumor necrosis factor receptor activity, type II","type":"narrow"},{"name":"tumor necrosis factor-activated receptor activity","type":"exact"}],"termid":"GO:0005031"}


id: GO:0035320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the site in the cell of an imaginal disc-derived wing at which a prehair initiates outgrowth. Restriction of prehair initiation to the distalmost part of a cell is essential to ensure that each wing epithelial cell produces one adult hair that points distally.","definition_xrefs":["PMID:8947551","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of proximal/distal cell polarity","termid":"GO:0022606"},{"relation_name":"part_of","term_name":"establishment of imaginal disc-derived wing hair orientation","termid":"GO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"imaginal disc-derived wing hair site selection","synonyms":[{"name":"prehair localization","type":"related"},{"name":"wing hair site selection","type":"exact"}],"termid":"GO:0035320"}


id: GO:0007124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cells grow as a chain of physically attached, elongated cells in response to an environmental stimulus or stimuli.","definition_xrefs":["PMID:19347739","PMID:11104818","PMID:24710476","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"},{"relation_name":"is_a","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudohyphal growth","termid":"GO:0007124"}


id: GO:0090181
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"cholesterol metabolic process","termid":"GO:0008203"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of cholesterol metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0090181","terms_by_termid":{"GO:0045540":null}}


id: GO:1903236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte tethering or rolling.","definition_xrefs":["PMID:18308860","GO_REF:0000058","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"regulates","term_name":"leukocyte tethering or rolling","termid":"GO:0050901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte tethering or rolling","termid":"GO:1903236"}


id: PBO:0042991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 4","termid":"PBO:0042991"}


id: PBO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DHHC type","termid":"PBO:0000454"}


id: MONDO:1011760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetrical onychomadesis, non-human animal","secondary_identifiers":["OMIA:001989"],"termid":"MONDO:1011760","xrefs":{"Monarch":{"xref_id":"1011760"}}}


id: PBO:0085247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidylprolyl-cis/trans-isomerase (PPIase); specific for phosphorylated S/T residues N-terminal to proline; regulates phosphorylation of RNAPII large subunit (Rpo21p) C-terminal domain (CTD) at Ser7; associates with phospho-Ser5 form of RNAPII in vivo; present along entire coding length of genes; represses initiation of CUTs; required for efficient termination of mRNA transcription, trimethylation of histone H3; human ortholog PIN1 can complement yeast null and ts mutants","termid":"PBO:0085247"}


id: PBO:0067214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 280, pseudogene","termid":"PBO:0067214"}


id: FYPO:0002358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"normal histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"normal silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002358"}


id: PBO:0026801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026801"}


id: PBO:0004010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin ortholog Bhd1","termid":"PBO:0004010"}


id: GO:0160159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of N-acetylmuramic acid catabolic process.","definition_xrefs":["PMID:18723630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"N-acetylmuramic acid catabolic process","termid":"GO:0097173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of N-acetylmuramic acid catabolic process","termid":"GO:0160159"}


id: PBO:0038928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor L2","termid":"PBO:0038928"}


id: GO:0009640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The control of plant growth, development, and differentiation by the duration and nature of light, independent of photosynthesis.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photomorphogenesis","secondary_identifiers":["Wikipedia:Photomorphogenesis"],"synonyms":[{"name":"plant development in response to light","type":"exact"}],"termid":"GO:0009640"}


id: GO:0006734
data:
  {"annotated_genes":["SJAG_03091","SJAG_06622","SJAG_00027","SJAG_03903","SJAG_00461","SJAG_06621","SJAG_03373","SJAG_02796","SJAG_02107","SJAG_02135","SJAG_02369","SJAG_02945","SJAG_03828","SJAG_00522","SJAG_00714","SJAG_02191","SJAG_00605","SJAG_03660","SJAG_01310","SJAG_04192","SJAG_04495","SJAG_04334","SJAG_00839","SJAG_02009","SJAG_03306","SJAG_01753","SJAG_02154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74147],"is_not":false,"summary":null,"term":"GO:0006734"},{"annotations":[107375,111340,107376,107745,111341,99868,96380,105543,100139,107746,79614,111345,111346,107374,105284,111343,111342,74188,111344,118333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[98434,113775,89653,118542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043490"},{"annotations":[96969,96970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006735"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving reduced nicotinamide adenine dinucleotide (NADH), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.","definition_xrefs":["GOC:jl","ISBN:0618254153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00522":null,"SJAG_00605":null,"SJAG_00714":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_01753":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03306":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"NADH metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD (reduced) metabolic process","type":"exact"},{"name":"NAD (reduced) metabolism","type":"exact"},{"name":"NADH metabolism","type":"exact"},{"name":"reduced NAD metabolic process","type":"exact"},{"name":"reduced NAD metabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:0006734","terms_by_termid":{"GO:0006734":null,"GO:0006735":null,"GO:0043490":null,"GO:0061621":null}}


id: PBO:0085419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; exports copper; has broad substrate specificity and can transport many mono- and divalent cations; transports a variety of drugs and is required for resistance to quinidine, barban, cisplatin, and bleomycin; contributes to potassium homeostasis; expression is regulated by copper","termid":"PBO:0085419"}


id: PBO:0038538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 13","termid":"PBO:0038538"}


id: PBO:0028100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alcohol_dehydrogenase_activity","termid":"PBO:0028100"}


id: GO:0016812
data:
  {"annotated_genes":["SJAG_01995","SJAG_00444","SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017168"},{"annotations":[73350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004151"},{"annotations":[64407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033971"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amide.","definition_xrefs":["EC:3.5.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00444":null,"SJAG_01995":null,"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70906"],"termid":"GO:0016812","terms_by_termid":{"GO:0004151":null,"GO:0017168":null,"GO:0033971":null}}


id: PBO:0115008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein involved in cytochrome c oxidase assembly, Cmc1","termid":"PBO:0115008"}


id: FYPO:0003972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which exit from mitosis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000337","FYPO:0000002"],"is_obsolete":false,"name":"abnormal exit from mitosis","synonyms":[{"name":"abnormal exit from mitosis during mitotic cell cycle","type":"related"},{"name":"abnormal exit from mitosis during vegetative growth","type":"exact"},{"name":"abnormal mitotic exit","type":"exact"}],"termid":"FYPO:0003972"}


id: GO:1903515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ion from cytosol to endoplasmic reticulum.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:rl","PMID:16402920","GOC:TermGenie","GO_REF:0000078","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"},{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"calcium ion transport from cytosol to endoplasmic reticulum","termid":"GO:1903515"}


id: GO:0031314
data:
  {"annotated_genes":["SJAG_03456","SJAG_05398","SJAG_00576","SJAG_01043","SJAG_04642","SJAG_00933","SJAG_00852","SJAG_00721","SJAG_01249","SJAG_03563","SJAG_00230","SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61171,62743,64710,66234,92705,103170,108130,108789,110103,111458],"is_not":false,"summary":null,"term":"GO:0031314"},{"annotations":[105663,102342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099616"}]},"cv_name":"cellular_component","definition":"The component of mitochondrial inner membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_00721":null,"SJAG_00852":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01249":null,"SJAG_03456":null,"SJAG_03563":null,"SJAG_04000":null,"SJAG_04642":null,"SJAG_05398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"extrinsic component of mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031314","terms_by_termid":{"GO:0031314":null,"GO:0099616":null}}


id: PBO:0065917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGEF1 pseudogene 3","termid":"PBO:0065917"}


id: GO:0031272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of pseudopodia.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of pseudopodium assembly","synonyms":[{"name":"regulation of pseudopodium formation","type":"related"}],"termid":"GO:0031272"}


id: PBO:0067851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 153","termid":"PBO:0067851"}


id: GO:2000448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage migration inhibitory factor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of macrophage migration inhibitory factor signaling pathway","termid":"GO:2000446"},{"relation_name":"positively_regulates","term_name":"macrophage migration inhibitory factor signaling pathway","termid":"GO:0035691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"positive regulation of MIF signaling pathway","type":"exact"},{"name":"positive regulation of macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:2000448"}


id: MONDO:0044252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete skin/hair/eye pigmentation, variation in, 6 (obsolete MONDO:0044252)","secondary_identifiers":["OMIM:210750"],"synonyms":[{"name":"SHEP6","type":"related"},{"name":"skin/hair/eye pigmentation 6, Blond/Brown hair","type":"related"},{"name":"skin/hair/eye pigmentation 6, blond/brown hair","type":"exact"},{"name":"skin/hair/eye pigmentation 6, blue/Green eyes","type":"related"},{"name":"skin/hair/eye pigmentation 6, blue/green eyes","type":"exact"},{"name":"skin/hair/eye pigmentation, variation IN, 6","type":"related"}],"termid":"MONDO:0044252","xrefs":{"Monarch":{"xref_id":"0044252"}}}


id: GO:2000054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000054)","synonyms":[{"name":"negative regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000054"}


id: PBO:0083697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsilon subunit of the F1 sector of mitochondrial F1F0 ATP synthase; which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; F1 translationally regulates ATP6 and ATP8 expression to achieve a balanced output of ATP synthase genes encoded in nucleus and mitochondria; phosphorylated","termid":"PBO:0083697"}


id: MONDO:1011817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal sac gland carcinoma, non-human animal","secondary_identifiers":["OMIA:001500"],"termid":"MONDO:1011817","xrefs":{"Monarch":{"xref_id":"1011817"}}}


id: GO:0033526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next, from other compounds, including L-glutamate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0033013"],"is_obsolete":false,"name":"tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"tetrapyrrole formation from glutamate","type":"exact"},{"name":"tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:0033526"}


id: FYPO:0002140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular pigment accumulation is increased during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular pigment accumulation","termid":"FYPO:0000741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular pigment accumulation during cellular response to caffeine","synonyms":[{"name":"abnormal cellular pigment accumulation during cellular response to caffeine","type":"exact"},{"name":"altered colony color during cellular response to caffeine","type":"related"},{"name":"altered colony colour during cellular response to caffeine","type":"related"},{"name":"increased cellular pigment accumulation during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"increased cellular pigment accumulation during cellular response to caffeine during vegetative growth","type":"exact"}],"termid":"FYPO:0002140"}


id: GO:0051274
data:
  {"annotated_genes":["SJAG_02590","SJAG_04771","SJAG_03123","SJAG_04509","SJAG_00218","SJAG_04483","SJAG_00876","SJAG_02446","SJAG_04668","SJAG_04659","SJAG_04073","SJAG_01290","SJAG_01835","SJAG_04462","SJAG_03587","SJAG_01453","SJAG_01288","SJAG_05285","SJAG_01255","SJAG_02222","SJAG_01787","SJAG_04666","SJAG_03705","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76943,78574,64249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[96312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[72799,93434,74756,76275,77629,108030,115133,117802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104540,79999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[89321,94261],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[89704],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[92597,94245,107839,119901,107264,69386,120034],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"beta-glucan anabolism","type":"exact"},{"name":"beta-glucan biosynthesis","type":"exact"},{"name":"beta-glucan formation","type":"exact"},{"name":"beta-glucan synthesis","type":"exact"}],"termid":"GO:0051274","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0029523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_septated_spheroid_vegetative_cell","termid":"PBO:0029523"}


id: PR:Q9UT35
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ectonucleoside triphosphate diphosphohydrolase 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00693","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine-diphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.08","secondary_identifiers":["UniProtKB:Q9UT35"],"synonyms":[{"name":"GDPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ENTPD6","type":"exact"}],"termid":"PR:Q9UT35"}


id: GO:1990028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by an intermediate voltage-gated channel. An intermediate voltage-gated channel is a channel whose open state is dependent on intermediate voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:16382099","Wikipedia:Calcium_channel"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"intermediate voltage-gated calcium channel activity","synonyms":[{"name":"R-type calcium channel","type":"related"}],"termid":"GO:1990028"}


id: PBO:0077140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 1","termid":"PBO:0077140"}


id: PBO:0039352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylmethionine decarboxylase 1 pseudogene 2","termid":"PBO:0039352"}


id: PATO:0001035
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's rate of change of momentum.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"force","synonyms":[{"name":"force amplitude","type":"exact"}],"termid":"PATO:0001035"}


id: PBO:0036374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF-5A-deoxyhypusine synthase Dys1 (predicted)","termid":"PBO:0036374"}


id: MONDO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the lung and is characterized by the presence of malignant glandular epithelial cells. There is a male predilection with a male to female ratio of 2:1. Usually lung adenocarcinoma is asymptomatic and is identified through screening studies or as an incidental radiologic finding. If clinical symptoms are present they include shortness of breath, cough, hemoptysis, chest pain, and fever. Tobacco smoke is a known risk factor.","definition_xrefs":["NCIT:C3512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"non-small cell lung carcinoma","termid":"MONDO:0005233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung adenocarcinoma","secondary_identifiers":["EFO:0000571","MEDGEN:57744","UMLS:C0152013","DOID:3910","Orphanet:415268","SCTID:254626006","MESH:C538231","ONCOTREE:LUAD"],"synonyms":[{"name":"adenocarcinoma of lung","type":"exact"},{"name":"adenocarcinoma of the lung","type":"exact"},{"name":"bronchogenic lung adenocarcinoma","type":"exact"},{"name":"lung adenocarcinoma","type":"exact"},{"name":"non-small cell lung adenocarcinoma","type":"exact"},{"name":"nonsmall cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0005061","xrefs":{"Monarch":{"xref_id":"0005061"}}}


id: MONDO:0014649
data:
  {"annotated_genes":["SJAG_04640"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86938],"is_not":false,"summary":null,"term":"MONDO:0014649"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the EDC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 50","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22570","MEDGEN:906893","UMLS:C4225319","DOID:0081213","OMIM:616460"],"synonyms":[{"name":"EDC3 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT50","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in EDC3","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 50","type":"exact"},{"name":"intellectual disability, autosomal recessive 50","type":"exact"},{"name":"intellectual disability, autosomal recessive type 50","type":"exact"},{"name":"mental retardation, autosomal recessive 50","type":"related"},{"name":"mental retardation, autosomal recessive type 50","type":"exact"}],"termid":"MONDO:0014649","terms_by_termid":{"MONDO:0014649":null},"xrefs":{"Monarch":{"xref_id":"0014649"}}}


id: PBO:0076197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 6","termid":"PBO:0076197"}


id: PBO:0027699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_rDNA_separation","termid":"PBO:0027699"}


id: PBO:0056548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanin concentrating hormone receptor 2","termid":"PBO:0056548"}


id: GO:0033922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing N-acetylmuramic residues.","definition_xrefs":["EC:3.2.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"peptidoglycan beta-N-acetylmuramidase activity","secondary_identifiers":["MetaCyc:3.2.1.92-RXN"],"synonyms":[{"name":"beta-2-acetamido-3-O-(D-1-carboxyethyl)-2-deoxy-D-glucoside acetamidodeoxyglucohydrolase activity","type":"related"},{"name":"exo-beta-N-acetylmuramidase activity","type":"related"},{"name":"exo-beta-acetylmuramidase activity","type":"related"},{"name":"peptidoglycan beta-N-acetylmuramoylexohydrolase activity","type":"related"}],"termid":"GO:0033922"}


id: FYPO:0004370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of cadmium ions into the vacuole occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0036249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cadmium ion import into vacuole","synonyms":[{"name":"decreased cadmium import into vacuole","type":"exact"},{"name":"decreased cadmium ion import into vacuole during mitotic cell cycle","type":"related"},{"name":"decreased cadmium ion import into vacuole during vegetative growth","type":"exact"},{"name":"reduced cadmium ion import into vacuole","type":"exact"}],"termid":"FYPO:0004370"}


id: GO:0002164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larva over time, from its formation to the mature structure. The larva is the early, immature form of an that at birth or hatching is fundamentally unlike its parent and must metamorphose before assuming the adult characters.","definition_xrefs":["GOC:jid","ISBN:0877795088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval development","termid":"GO:0002164"}


id: MONDO:0011061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"choreatic disease","termid":"MONDO:0001595"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorea, remitting, with nystagmus and cataract","secondary_identifiers":["MEDGEN:330463","MESH:C535355","UMLS:C1832422","OMIM:601372"],"synonyms":[{"name":"chorea, remitting with nystagmus and cataracts","type":"related"},{"name":"chorea, remitting, with nystagmus and cataract","type":"exact"},{"name":"familial remitting chorea, nystagmus and cataracts","type":"related"}],"termid":"MONDO:0011061","xrefs":{"Monarch":{"xref_id":"0011061"}}}


id: PBO:0076987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 5","termid":"PBO:0076987"}


id: MONDO:0006473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tracheal squamous cell carcinoma (obsolete MONDO:0006473)","termid":"MONDO:0006473","xrefs":{"Monarch":{"xref_id":"0006473"}}}


id: PBO:0027734
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_cycle_arrest_with_unreplicated_DNA","termid":"PBO:0027734"}


id: MONDO:1012903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome that occurs in pigs due to a mutation in the SOX10 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome, non-human animal","termid":"MONDO:1011447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, SOX10-related, pig","secondary_identifiers":["OMIA:002453-9823"],"termid":"MONDO:1012903","xrefs":{"Monarch":{"xref_id":"1012903"}}}


id: GO:0061560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a cranial ganglion. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion formation","termid":"GO:0061554"},{"relation_name":"part_of","term_name":"cranial ganglion morphogenesis","termid":"GO:0061559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion formation","synonyms":[{"name":"cranial ganglia formation","type":"related"}],"termid":"GO:0061560"}


id: PBO:0031245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_division","termid":"PBO:0031245"}


id: GO:1901823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of delta-carotene.","definition_xrefs":["UniPathway:UPA00801","GOC:yaf","GOC:TermGenie","PMID:8837512","MetaCyc:PWY-5946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"delta-carotene metabolic process","termid":"GO:1901822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"delta-carotene catabolic process","synonyms":[{"name":"delta-carotene breakdown","type":"exact"},{"name":"delta-carotene catabolism","type":"exact"},{"name":"delta-carotene degradation","type":"exact"}],"termid":"GO:1901823"}


id: GO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a pro-T cell becomes committed to becoming an NK T cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell lineage commitment","termid":"GO:0002363"},{"relation_name":"part_of","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell lineage commitment","synonyms":[{"name":"NK T lymphocyte lineage commitment","type":"exact"},{"name":"NK T-cell lineage commitment","type":"exact"},{"name":"NK T-lymphocyte lineage commitment","type":"exact"},{"name":"natural killer T lymphocyte lineage commitment","type":"exact"},{"name":"natural killer T-cell lineage commitment","type":"exact"},{"name":"natural killer T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002364"}


id: MONDO:0006835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glomerular disorder characterized by the electron microscopic finding of loss of podocyte foot processes. Light microscopic examination does not show glomerular changes. Patients present with proteinuria and nephrotic syndrome.","definition_xrefs":["NCIT:C34844"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nephrotic syndrome","termid":"MONDO:0005377"},{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"lipoid nephrosis","secondary_identifiers":["NANDO:2200112","EFO:1001020","SCTID:44785005","UMLS:C0027721","MESH:D009402","MEDGEN:10307","MedDRA:10058325","DOID:10966","NANDO:1200720"],"synonyms":[{"name":"MCNS","type":"related"},{"name":"idiopathic minimal change nephrotic syndrome","type":"related"},{"name":"lipoid nephrosis","type":"exact"},{"name":"minimal change disease","type":"exact"},{"name":"minimal change glomerulonephritis","type":"exact"},{"name":"minimal change glomerulopathy","type":"related"},{"name":"minimal change nephropathy","type":"exact"},{"name":"minimal change nephrotic syndrome","type":"related"},{"name":"nephrotic syndrome with lesion of minimal change glomerulonephritis","type":"related"},{"name":"nephrotic syndrome with lesion of minimal change nephrotic syndrome","type":"related"},{"name":"nil disease","type":"exact"}],"termid":"MONDO:0006835","xrefs":{"Monarch":{"xref_id":"0006835"}}}


id: SO:0001024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A haplotype is one of a set of coexisting sequence variants of a haplotype block.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"variant_of","term_name":"haplotype_block","termid":"SO:0000355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haplotype","secondary_identifiers":["http://en.wikipedia.org/wiki/Haplotype"],"termid":"SO:0001024"}


id: FYPO:0004156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during mitosis is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during mitosis","synonyms":[{"name":"decreased protein accumulation during mitosis","type":"related"},{"name":"decreased protein level during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein level during mitotic M phase","type":"related"},{"name":"decreased protein level during mitotic nuclear division","type":"exact"},{"name":"reduced protein level during mitosis","type":"exact"}],"termid":"FYPO:0004156"}


id: SO:0000029
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The canonical base pair, where two bases interact via WC edges, with glycosidic bonds oriented cis relative to the axis of orientation.","definition_xrefs":["PMID:12177293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WC_base_pair","synonyms":[{"name":"WC base pair","type":"exact"},{"name":"Watson Crick base pair","type":"exact"},{"name":"Watson-Crick base pair","type":"related"},{"name":"Watson-Crick pair","type":"exact"},{"name":"canonical base pair","type":"exact"}],"termid":"SO:0000029"}


id: FYPO:0004955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of phosphatidylinositol-3-phosphate binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatidylinositol binding","termid":"FYPO:0008328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased phosphatidylinositol-3-phosphate binding","synonyms":[{"name":"decreased PtdIns-3-P binding","type":"exact"},{"name":"decreased phosphatidylinositol 3-phosphate binding","type":"exact"},{"name":"reduced phosphatidylinositol-3-phosphate binding","type":"exact"}],"termid":"FYPO:0004955"}


id: MONDO:0100104
data:
  {"annotated_genes":["SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87942],"is_not":false,"summary":null,"term":"MONDO:0100104"}]},"cv_name":"mondo","definition":"Any fetal akinesia deformation sequence in which the cause of the disease is a mutation in the NUP88 gene.","definition_xrefs":["OMIM:618393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal akinesia deformation sequence","termid":"MONDO:0008824"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01065":null},"genotype_count":0,"is_obsolete":false,"name":"fetal akinesia deformation sequence 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1675450","UMLS:C4760578","DOID:0111379","GARD:16497"],"synonyms":[{"name":"FADS4","type":"exact"}],"termid":"MONDO:0100104","terms_by_termid":{"MONDO:0100104":null},"xrefs":{"Monarch":{"xref_id":"0100104"}}}


id: MOD:00705
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to D-valine.","definition_xrefs":["ChEBI:30016","RESID:AA0200","PubMed:15853325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-valine","synonyms":[{"name":"(R)-2-amino-3-methylbutanoic acid","type":"exact"},{"name":"D-Val","type":"exact"},{"name":"D-valine","type":"exact"},{"name":"MOD_RES D-valine","type":"exact"},{"name":"alpha-amino-beta-methylbutyric acid","type":"exact"},{"name":"alpha-aminoisovaleric acid","type":"exact"}],"termid":"MOD:00705"}


id: PBO:0084626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methylene-fatty-acyl-phospholipid synthase; catalyzes the last two steps in phosphatidylcholine biosynthesis; also known as phospholipid methyltransferase","termid":"PBO:0084626"}


id: MONDO:0003133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the glomeruli with infiltration by polymorphonuclear leukocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"exudative glomerulonephritis","secondary_identifiers":["DOID:4777","UMLS:C0546345","MEDGEN:154269","NCIT:C35706"],"termid":"MONDO:0003133","xrefs":{"Monarch":{"xref_id":"0003133"}}}


id: MONDO:1012954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyotrophic lateral sclerosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"},{"relation_name":"is_a","term_name":"neuromuscular disease, non-human animal","termid":"MONDO:1012983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis, non-human animal","termid":"MONDO:1012954","xrefs":{"Monarch":{"xref_id":"1012954"}}}


id: PBO:0090948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh6","termid":"PBO:0090948"}


id: GO:0043443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving acetone, propan-2-one.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acetone metabolic process (obsolete GO:0043443)","synonyms":[{"name":"2-propanone metabolic process","type":"exact"},{"name":"2-propanone metabolism","type":"exact"},{"name":"acetone metabolism","type":"exact"},{"name":"dimethyl ketone metabolic process","type":"exact"},{"name":"dimethyl ketone metabolism","type":"exact"},{"name":"propan-2-one metabolic process","type":"exact"},{"name":"propan-2-one metabolism","type":"exact"}],"termid":"GO:0043443"}


id: PBO:0050647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class A member 3, pseudogene","termid":"PBO:0050647"}


id: GO:0036206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of expression of a histone-encoding gene. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein.","definition_xrefs":["GOC:krc","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone gene expression (obsolete GO:0036206)","synonyms":[{"name":"regulation of expression of histone-encoding gene","type":"exact"}],"termid":"GO:0036206"}


id: GO:0007279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a small group of cells (pole cells) at the posterior pole of the insect blastula. They are the first cells to cellularize after the arrival of nuclei at the end of the syncytial blastula stage and are the precursors to the insect germ cells.","definition_xrefs":["PMID:9988212","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellularization","termid":"GO:0007349"},{"relation_name":"part_of","term_name":"pole cell development","termid":"GO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pole cell formation","termid":"GO:0007279"}


id: MONDO:0000370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Askin's tumor (obsolete MONDO:0000370)","termid":"MONDO:0000370","xrefs":{"Monarch":{"xref_id":"0000370"}}}


id: PBO:0054636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2041","termid":"PBO:0054636"}


id: GO:0004921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-11 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-11 receptor activity","synonyms":[{"name":"IL-11 receptor activity","type":"exact"},{"name":"IL-11R","type":"exact"},{"name":"gp130","type":"related"}],"termid":"GO:0004921"}


id: PBO:0028449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination_at_silent_mating-type_cassette","termid":"PBO:0028449"}


id: PBO:0002413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25 (predicted)","termid":"PBO:0002413"}


id: PBO:0071792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p38","termid":"PBO:0071792"}


id: GO:0034792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hypophosphite + 2-oxoglutarate + O2 = succinate + phosphite + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete hypophosphite dioxygenase activity (obsolete GO:0034792)","termid":"GO:0034792"}


id: GO:1904671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of cell differentiation that is involved in stem cell population maintenance.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rph","GO_REF:0000060","GOC:BHF_miRNA","PMID:19409607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation involved in stem cell population maintenance","synonyms":[{"name":"down regulation of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"down regulation of cell differentiation involved in stem cell population maintenance","type":"exact"},{"name":"down-regulation of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"down-regulation of cell differentiation involved in stem cell population maintenance","type":"exact"},{"name":"downregulation of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"downregulation of cell differentiation involved in stem cell population maintenance","type":"exact"},{"name":"inhibition of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"inhibition of cell differentiation involved in stem cell population maintenance","type":"narrow"},{"name":"negative regulation of cell differentiation involved in maintenance of pluripotency","type":"related"}],"termid":"GO:1904671"}


id: GO:0015481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of maltose from one side of a membrane to the other. Maltose is the disaccharide 4-O-alpha-D-glucopyranosyl-D-glucopyranose, an intermediate in the enzymatic breakdown of glycogen and starch. This transporter is a porin so enables the energy independent passage of substances, sized less than 1000 Da, across a membrane. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"maltose transporting porin activity","secondary_identifiers":["Wikipedia:Maltoporin"],"synonyms":[{"name":"maltoporin","type":"exact"}],"termid":"GO:0015481"}


id: PBO:0068805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 42, pseudogene","termid":"PBO:0068805"}


id: GO:0051469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle with the lipid bilayer membrane around the vacuole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"vacuole fusion","termid":"GO:0097576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"vesicle fusion with vacuole","secondary_identifiers":["GO:0042146"],"synonyms":[{"name":"heterotypic vacuole fusion (non-autophagic)","type":"related"},{"name":"heterotypic vacuole fusion, non-autophagic","type":"related"}],"termid":"GO:0051469"}


id: PBO:0034243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_functional_equivalence_relationship_with","termid":"PBO:0034243"}


id: MONDO:0012108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spondyloepimetaphyseal dysplasia characterized by disproportionate early-onset dwarfism, bowing of the lower limbs, short, wide and stocky long bones with severe epiphyseal and metaphyseal changes, lumbar lordosis, hypoplastic iliac bones, flat ovoid vertebral bodies and normal hands.","definition_xrefs":["Orphanet:156728"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, matrilin-3 type","secondary_identifiers":["MEDGEN:325181","GARD:10611","icd11.foundation:1983063881","MESH:C563869","SCTID:719166003","OMIM:608728","UMLS:C1837481"],"synonyms":[{"name":"SEMD MATN3-related","type":"related"},{"name":"SEMD, MATN3-related","type":"exact"},{"name":"SEMD, matrilin-3 type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia matrilin-3 related","type":"related"},{"name":"spondyloepimetaphyseal dysplasia matrilin-3 type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Borochowitz-Cormier-Daire type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, matrilin-3 related","type":"related"}],"termid":"MONDO:0012108","xrefs":{"Monarch":{"xref_id":"0012108"}}}


id: GO:0045911
data:
  {"annotated_genes":["SJAG_03438","SJAG_00266","SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[81163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045951"},{"annotations":[90883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA recombination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"positively_regulates","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00995":null,"SJAG_03438":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"positive regulation of DNA recombination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA recombination","type":"narrow"},{"name":"stimulation of DNA recombination","type":"narrow"},{"name":"up regulation of DNA recombination","type":"exact"},{"name":"up-regulation of DNA recombination","type":"exact"},{"name":"upregulation of DNA recombination","type":"exact"}],"termid":"GO:0045911","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0045951":null}}


id: MONDO:0700059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Actinobacillus infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease, non-human animal","termid":"MONDO:0700050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actinobacillus infectious disease, non-human animal","termid":"MONDO:0700059","xrefs":{"Monarch":{"xref_id":"0700059"}}}


id: PATO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001076 relative momentum (obsolete PATO:0001076)","termid":"PATO:0001076"}


id: GO:0090188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of pancreatic juice secretion","termid":"GO:0090186"},{"relation_name":"negatively_regulates","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pancreatic juice secretion","termid":"GO:0090188"}


id: PR:O60135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lcf1 gene.","definition_xrefs":["UniProtKB:O60135","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid--CoA ligase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.02","synonyms":[{"name":"Spom972h-lcf1","type":"exact"},{"name":"fatty acid activator 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"long-chain acyl-CoA synthetase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60135"}


id: GO:0097558
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left ventral basal body and exits the cell body proximally and dorsal to the ventral disc.","definition_xrefs":["GOC:giardia","PMID:5961344","PMID:16607022","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left ventral flagellum","synonyms":[{"name":"left ventral cilium","type":"exact"}],"termid":"GO:0097558"}


id: GO:0004075
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67250],"is_not":false,"summary":null,"term":"GO:0004075"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein.","definition_xrefs":["EC:6.3.4.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"biotin carboxylase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:BIOTIN-CARBOXYL-RXN","RHEA:13501"],"synonyms":[{"name":"biotin carboxylase (component of acetyl CoA carboxylase) activity","type":"related"},{"name":"biotin-carboxyl-carrier-protein:carbon-dioxide ligase (ADP-forming) activity","type":"related"}],"termid":"GO:0004075","terms_by_termid":{"GO:0004075":null}}


id: PBO:0081333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 133","termid":"PBO:0081333"}


id: GO:0010222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the stem of vascular plants.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem vascular tissue pattern formation","termid":"GO:0010222"}


id: PBO:0042423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 7","termid":"PBO:0042423"}


id: PBO:0069961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1255, pseudogene","termid":"PBO:0069961"}


id: GO:0003386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the amphid sensory organ over time, from its formation to the mature structure. Amphid sensory organs are the sensory organs of nematodes.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amphid sensory organ development","termid":"GO:0003386"}


id: RO:HOM0000026
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"1:many orthology that involves a gene in species A and its ortholog in species B, when duplications more recent than the species split have occurred in species A but not in species B.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_1_to_many_orthology_relationship_with","termid":"RO:HOM0000034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_semi-orthology_relationship_with","synonyms":[{"name":"semi-orthologous to","type":"exact"}],"termid":"RO:HOM0000026"}


id: GO:0030109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I molecule of the HLA-B subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["PMID:11929129","PMID:9368779","GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"HLA-B specific inhibitory MHC class I receptor activity","termid":"GO:0030109"}


id: GO:0047113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a quinone + an aldehyde + H2O = a carboxylate + a quinol + H+.","definition_xrefs":["RHEA:13881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aldehyde dehydrogenase (quinone) activity","secondary_identifiers":["MetaCyc:1.2.99.3-RXN","EC:1.2.5.2"],"synonyms":[{"name":"aldehyde dehydrogenase (acceptor) activity","type":"related"},{"name":"aldehyde dehydrogenase (pyrroloquinoline-quinone)","type":"related"},{"name":"aldehyde:(pyrroloquinoline-quinone) oxidoreductase activity","type":"related"}],"termid":"GO:0047113"}


id: PBO:0087608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres","termid":"PBO:0087608"}


id: GO:0009864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by jasmonic acid involved in induced systemic resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of innate immune response","termid":"GO:0002218"},{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"jasmonic acid mediated signaling pathway","termid":"GO:0009867"},{"relation_name":"part_of","term_name":"induced systemic resistance","termid":"GO:0009682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"induced systemic resistance, jasmonic acid mediated signaling pathway","synonyms":[{"name":"induced systemic resistance, jasmonic acid mediated signalling pathway","type":"exact"},{"name":"jasmonic acid mediated signaling pathway (induced systemic resistance)","type":"exact"}],"termid":"GO:0009864"}


id: PBO:0076411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 6","termid":"PBO:0076411"}


id: PBO:0074343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 2","termid":"PBO:0074343"}


id: PBO:0081600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 524","termid":"PBO:0081600"}


id: PBO:0058551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6130","termid":"PBO:0058551"}


id: PBO:0079951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 4","termid":"PBO:0079951"}


id: PBO:0012053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein (predicted)","termid":"PBO:0012053"}


id: FYPO:0002856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0005447","FYPO:0000707","FYPO:0000002"],"is_obsolete":false,"name":"abnormal glutathione synthase activity","synonyms":[{"name":"abnormal GSH synthase activity","type":"exact"},{"name":"abnormal glutathione synthetase activity","type":"exact"}],"termid":"FYPO:0002856"}


id: GO:0003184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the pulmonary valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve morphogenesis","termid":"GO:0003179"},{"relation_name":"part_of","term_name":"pulmonary valve development","termid":"GO:0003177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary valve morphogenesis","termid":"GO:0003184"}


id: GO:0045108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly or disassembly of intermediate filaments by the addition or removal of monomers from a filament; this usually occurs through the opposing action of kinases and phosphatases.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"intermediate filament polymerization or depolymerization","termid":"GO:0045105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate filament polymerization or depolymerization","termid":"GO:0045108"}


id: PBO:0034320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_transport_along","termid":"PBO:0034320"}


id: GO:0033276
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that does not contain either a TATA-binding protein (TBP) or a TBP-like factor, but is composed of several TAFIIs and other proteins, including a histone acetyltransferase. This complex is able to nucleate transcription initiation by RNA polymerase II, can mediate transcriptional activation, and has histone acetyltransferase activity.","definition_xrefs":["PMID:9603525","PMID:10373431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"},{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"transcription factor TFTC complex","termid":"GO:0033276"}


id: PBO:0055460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2893","termid":"PBO:0055460"}


id: GO:0018465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + vanillyl alcohol = H2O2 + vanillin.","definition_xrefs":["EC:1.1.3.38","RHEA:10036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vanillyl-alcohol oxidase activity","secondary_identifiers":["KEGG_REACTION:R02877","MetaCyc:1.1.3.38-RXN","UM-BBD_reactionID:r0651"],"synonyms":[{"name":"4-hydroxy-2-methoxybenzyl alcohol oxidase activity","type":"related"},{"name":"vanillyl alcohol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0018465"}


id: PBO:0066684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, LIM domain interacting pseudogene 2","termid":"PBO:0066684"}


id: PATO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A life span which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"life span","termid":"PATO:0000050"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased life span","synonyms":[{"name":"high life span","type":"exact"}],"termid":"PATO:0001603"}


id: PBO:0028456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actomyosin_contractile_ring_assembly","termid":"PBO:0028456"}


id: GO:1990778
data:
  {"annotated_genes":["SJAG_00596","SJAG_03838","SJAG_03915","SJAG_03453","SJAG_02583","SJAG_03810","SJAG_00379","SJAG_02392","SJAG_02228","SJAG_04158","SJAG_00858","SJAG_01196","SJAG_04703","SJAG_04565","SJAG_00333","SJAG_01114","SJAG_04947","SJAG_00144","SJAG_03011","SJAG_04930","SJAG_03029","SJAG_01516","SJAG_04461","SJAG_04923","SJAG_00330","SJAG_03602","SJAG_02572","SJAG_00279","SJAG_03970","SJAG_04609","SJAG_00916","SJAG_04597","SJAG_02912","SJAG_01809","SJAG_04434","SJAG_03756","SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120207"},{"annotations":[96755,114756,103022,61885,93125,114973,67768,120897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[97578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061951"},{"annotations":[110742,108971,97011,71923,108343,79364,111531,114975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[89899],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[96256],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[97716],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903077"},{"annotations":[100304],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120047"},{"annotations":[109093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044379"},{"annotations":[116023,93129,118163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990896"},{"annotations":[101978,106444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903360"},{"annotations":[92971,107277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071574"},{"annotations":[94167,120653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"},{"annotations":[69838,116936,66712,92678,92378,103298,91354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072659"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the cell periphery.","definition_xrefs":["PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00279":null,"SJAG_00330":null,"SJAG_00333":null,"SJAG_00379":null,"SJAG_00596":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01196":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02228":null,"SJAG_02282":null,"SJAG_02392":null,"SJAG_02572":null,"SJAG_02583":null,"SJAG_02912":null,"SJAG_03011":null,"SJAG_03029":null,"SJAG_03453":null,"SJAG_03602":null,"SJAG_03756":null,"SJAG_03810":null,"SJAG_03838":null,"SJAG_03915":null,"SJAG_03970":null,"SJAG_04158":null,"SJAG_04434":null,"SJAG_04461":null,"SJAG_04565":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04703":null,"SJAG_04923":null,"SJAG_04930":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell periphery","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:1990778","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0044379":null,"GO:0061951":null,"GO:0071574":null,"GO:0072659":null,"GO:0099638":null,"GO:0120047":null,"GO:0120207":null,"GO:0140325":null,"GO:1903077":null,"GO:1903360":null,"GO:1904498":null,"GO:1990896":null}}


id: MONDO:0016769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Linear lichen planus (LLP), also referred to as Blaschkoid LP, is a rare type of lichen planus characterized by a linear distribution of lichenoid lesions along the lines of Blaschko, which are embryonic pathways of skin development.","definition_xrefs":["Orphanet:254379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"linear lichen planus","secondary_identifiers":["MEDGEN:507921","UMLS:C0023650","GARD:11898","icd11.foundation:7180779","SCTID:44509000"],"synonyms":[{"name":"Blaschkoid LP","type":"exact"},{"name":"Blaschkoid lichen planus","type":"exact"},{"name":"linear LP","type":"exact"},{"name":"llp","type":"related"}],"termid":"MONDO:0016769","xrefs":{"Monarch":{"xref_id":"0016769"}}}


id: MONDO:0859304
data:
  {"annotated_genes":["SJAG_01806"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87600],"is_not":false,"summary":null,"term":"MONDO:0859304"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01806":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration, childhood-onset, with multisystem involvement due to mitochondrial dysfunction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824013","UMLS:C5774240","OMIM:620089"],"termid":"MONDO:0859304","terms_by_termid":{"MONDO:0859304":null},"xrefs":{"Monarch":{"xref_id":"0859304"}}}


id: GO:0038116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL21 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling","PMID:15059845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 21 signaling pathway","synonyms":[{"name":"C-C chemokine receptor type 7 signaling pathway","type":"related"},{"name":"CCL21-mediated signaling pathway","type":"exact"},{"name":"chemokine (C-C motif) ligand 21 signalling pathway","type":"exact"}],"termid":"GO:0038116"}


id: PBO:0067379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 481, pseudogene","termid":"PBO:0067379"}


id: PBO:0072060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 30","termid":"PBO:0072060"}


id: GO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of eosinophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of eosinophil degranulation","termid":"GO:0043309"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"eosinophil degranulation","termid":"GO:0043308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of eosinophil degranulation","synonyms":[{"name":"down regulation of eosinophil degranulation","type":"exact"},{"name":"down-regulation of eosinophil degranulation","type":"exact"},{"name":"downregulation of eosinophil degranulation","type":"exact"},{"name":"inhibition of eosinophil degranulation","type":"narrow"},{"name":"negative regulation of eosinophil granule exocytosis","type":"exact"}],"termid":"GO:0043310"}


id: MONDO:0007910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein types--Lt system","secondary_identifiers":["UMLS:C1835359","OMIM:152300","MEDGEN:322644"],"synonyms":[{"name":"lipoprotein types--Lt system","type":"exact"}],"termid":"MONDO:0007910","xrefs":{"Monarch":{"xref_id":"0007910"}}}


id: MONDO:0009343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease with ulnar polydactyly, polysyndactyly of big toes, and ventricular septal defect","secondary_identifiers":["MESH:C538120","MESH:C565517","MEDGEN:341065","OMIM:235750","UMLS:C1856111"],"synonyms":[{"name":"Hirschsprung disease polydactyly heart disease","type":"related"},{"name":"Hirschsprung disease with ulnar polydactyly, polysyndactyly of big toes, and ventricular septal defect","type":"exact"}],"termid":"MONDO:0009343","xrefs":{"Monarch":{"xref_id":"0009343"}}}


id: PBO:0071790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p25 like","termid":"PBO:0071790"}


id: PR:Q10430
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein Spc25 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04698","PRO:DNx","PANTHER:PTHR14281:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein spc25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.04c","secondary_identifiers":["UniProtKB:Q10430"],"synonyms":[{"name":"Spom972h-SPC25","type":"exact"}],"termid":"PR:Q10430"}


id: PBO:0075475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily A member 1","termid":"PBO:0075475"}


id: GO:0070262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-L-serine to form peptidyl-serine.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine dephosphorylation","termid":"GO:0070262"}


id: PBO:0074400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 9","termid":"PBO:0074400"}


id: PBO:0089329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase, Coq3 variant","termid":"PBO:0089329"}


id: MONDO:0011452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypotrichosis in which the cause of the disease is a mutation in the LIPH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"isolated familial wooly hair disorder","termid":"MONDO:0008686"},{"relation_name":"is_a","term_name":"hypotrichosis simplex","termid":"MONDO:0018914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 7","secondary_identifiers":["UMLS:C1836672","MESH:C536973","GARD:8178","OMIM:604379","DOID:0110704","MEDGEN:322969"],"synonyms":[{"name":"HYPT7","type":"exact"},{"name":"LAH2","type":"exact"},{"name":"LIPH hypotrichosis","type":"exact"},{"name":"Lah2","type":"exact"},{"name":"Mari type alopecia universalis congenita","type":"related"},{"name":"Wh/Ht","type":"related"},{"name":"alopecia universalis congenita, Mari type","type":"related"},{"name":"hypotrichosis 7","type":"exact"},{"name":"hypotrichosis caused by mutation in LIPH","type":"exact"},{"name":"hypotrichosis type 7","type":"exact"},{"name":"hypotrichosis, autosomal recessive","type":"related"},{"name":"hypotrichosis, localized, autosomal recessive 2","type":"exact"},{"name":"hypotrichosis, total, Mari type","type":"related"},{"name":"total Mari type hypotrichosis,","type":"exact"},{"name":"total hypotrichosis, Mari type","type":"related"},{"name":"woolly hair, autosomal recessive 2 with or without hypotrichosis","type":"exact"},{"name":"woolly hair, autosomal recessive 2, with or without hypotrichosis","type":"related"},{"name":"wooly hair, autosomal recessive 2 with or without hypotrichosis","type":"exact"},{"name":"wooly hair, autosomal recessive 2, with or without hypotrichosis","type":"related"}],"termid":"MONDO:0011452","xrefs":{"Monarch":{"xref_id":"0011452"}}}


id: GO:1905644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of FACT complex assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:20889714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"FACT complex assembly","termid":"GO:1905635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of FACT complex assembly","synonyms":[{"name":"regulation of FACT complex formation","type":"exact"},{"name":"regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"regulation of Facilitates chromatin transcription complex formation","type":"exact"}],"termid":"GO:1905644"}


id: PBO:0040113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with SH3 domain, ankyrin repeat and PH domain 3","termid":"PBO:0040113"}


id: PBO:0051754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate kinase 3","termid":"PBO:0051754"}


id: GO:1905906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid fibril formation.","definition_xrefs":["GOC:TermGenie","PMID:23106396","GOC:aruk","GOC:bc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"amyloid fibril formation","termid":"GO:1990000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid fibril formation","synonyms":[{"name":"regulation of amyloid fibril assembly","type":"related"},{"name":"regulation of amyloid structure assembly","type":"related"},{"name":"regulation of amyloid structure formation","type":"related"}],"termid":"GO:1905906"}


id: GO:0051058
data:
  {"annotated_genes":["SJAG_04462","SJAG_03508","SJAG_03592","SJAG_06270","SJAG_00883","SJAG_02514","SJAG_01790","SJAG_02169","SJAG_02379","SJAG_03353","SJAG_03681","SJAG_04455","SJAG_04943","SJAG_00526","SJAG_00229","SJAG_01386","SJAG_01464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[73284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[101470,109162,92553,109473,106960,93571,94685,94770,95299,97499,109028,112121,103166,74661,117886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of small GTPase mediated signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02514":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of small GTPase mediated signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"down-regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"downregulation of small GTPase mediated signal transduction","type":"exact"},{"name":"inhibition of small GTPase mediated signal transduction","type":"narrow"},{"name":"negative regulation of small GTPase-mediated signal transduction","type":"exact"}],"termid":"GO:0051058","terms_by_termid":{"GO:0031030":null,"GO:0035024":null,"GO:0046580":null}}


id: MONDO:0040673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that affects the peritoneum.","definition_xrefs":["NCIT:C136410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneum cancer","termid":"MONDO:0002087"},{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant peritoneal germ cell tumor","secondary_identifiers":["MEDGEN:1612836","UMLS:C4526657"],"synonyms":[{"name":"malignant peritoneal germ cell tumor","type":"exact"}],"termid":"MONDO:0040673","xrefs":{"Monarch":{"xref_id":"0040673"}}}


id: MONDO:0017030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete interstitial lung disease in childhood and adulthood (obsolete MONDO:0017030)","secondary_identifiers":["Orphanet:264757"],"synonyms":[{"name":"ILD in childhood and adulthood","type":"exact"}],"termid":"MONDO:0017030","xrefs":{"Monarch":{"xref_id":"0017030"}}}


id: MONDO:0012920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 6q25.","definition_xrefs":["DOID:0110758","PMID:19073967","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 21","secondary_identifiers":["MEDGEN:436543","OMIM:612521","UMLS:C2675865","MESH:C567285"],"synonyms":[{"name":"IDDM21","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 21","type":"related"},{"name":"insulin-dependent diabetes mellitus 21","type":"exact"}],"termid":"MONDO:0012920","xrefs":{"Monarch":{"xref_id":"0012920"}}}


id: FYPO:0006117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid and has two or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"septated spheroid vegetative cell","termid":"FYPO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"multiseptate spheroid vegetative cell","synonyms":[{"name":"multiseptate rounded vegetative cell","type":"exact"}],"termid":"FYPO:0006117"}


id: GO:0051195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a cofactor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cofactor metabolic process (obsolete GO:0051195)","synonyms":[{"name":"down regulation of cofactor metabolic process","type":"exact"},{"name":"down-regulation of cofactor metabolic process","type":"exact"},{"name":"downregulation of cofactor metabolic process","type":"exact"},{"name":"inhibition of cofactor metabolic process","type":"narrow"},{"name":"negative regulation of cofactor metabolism","type":"exact"}],"termid":"GO:0051195"}


id: PBO:0044867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2B","termid":"PBO:0044867"}


id: PBO:0063743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 8","termid":"PBO:0063743"}


id: FYPO:0004953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the prospore membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000121","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal prospore membrane","synonyms":[{"name":"abnormal forespore membrane","type":"exact"}],"termid":"FYPO:0004953"}


id: PR:P30655
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.13c","secondary_identifiers":["UniProtKB:P30655"],"synonyms":[{"name":"SPAC4A8.13c","type":"related"},{"name":"Spom972h-PSMB5","type":"exact"},{"name":"macropain subunit pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"multicatalytic endopeptidase complex subunit pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"proteasome component pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30655"}


id: MONDO:0017089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A megalencephaly (disease) that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephaly","termid":"MONDO:0016608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated megalencephaly","secondary_identifiers":["GARD:20977","Orphanet:268920"],"synonyms":[{"name":"isolated macrencephaly","type":"exact"},{"name":"isolated megalencephaly (disease)","type":"exact"},{"name":"nonsyndromic megalencephaly (disease)","type":"exact"}],"termid":"MONDO:0017089","xrefs":{"Monarch":{"xref_id":"0017089"}}}


id: PBO:0044991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExH-box helicase 58","termid":"PBO:0044991"}


id: GO:0005750
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains about 10 polypeptide subunits including four redox centers: cytochrome b/b6, cytochrome c1 and an 2Fe-2S cluster. Catalyzes the oxidation of ubiquinol by oxidized cytochrome c1.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex III (obsolete GO:0005750)","synonyms":[{"name":"mitochondrial coenzyme Q-cytochrome c oxidoreductase complex","type":"exact"},{"name":"mitochondrial coenzyme Q-cytochrome c reductase complex","type":"exact"},{"name":"mitochondrial complex III","type":"exact"},{"name":"mitochondrial cytochrome bc(1) complex","type":"exact"},{"name":"mitochondrial cytochrome bc1 complex","type":"exact"},{"name":"mitochondrial electron transport complex III","type":"related"},{"name":"mitochondrial ubiquinol-cytochrome c oxidoreductase complex","type":"exact"},{"name":"mitochondrial ubiquinol-cytochrome-c reductase complex","type":"exact"}],"termid":"GO:0005750"}


id: GO:0070408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbamoyl phosphate, an intermediate in the urea cycle and other nitrogen compound metabolic pathways.","definition_xrefs":["CHEBI:17672","GOC:rph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbamoyl phosphate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:bzn"],"synonyms":[{"name":"carbamoyl phosphate metabolism","type":"exact"}],"termid":"GO:0070408"}


