# terms

id: MONDO:0008328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"open-angle glaucoma","termid":"MONDO:0005338"},{"relation_name":"is_a","term_name":"hereditary glaucoma","termid":"MONDO:0018174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 1, open angle, P","secondary_identifiers":["MEDGEN:854866","OMIM:177700","UMLS:C3888338","MESH:C566748"],"synonyms":[{"name":"GLC1P","type":"related"},{"name":"glaucoma 1, open angle, P","type":"exact"},{"name":"glaucoma 1, open angle, type P","type":"exact"}],"termid":"MONDO:0008328","xrefs":{"Monarch":{"xref_id":"0008328"}}}


id: GO:0032383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of cholesterol within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"is_a","term_name":"regulation of intracellular sterol transport","termid":"GO:0032380"},{"relation_name":"regulates","term_name":"intracellular cholesterol transport","termid":"GO:0032367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular cholesterol transport","termid":"GO:0032383"}


id: MONDO:0024744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the choroid plexus in the brain and occurs during childhood.","definition_xrefs":["NCIT:C42080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choroid plexus neoplasm","termid":"MONDO:0016717"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood choroid plexus neoplasm","secondary_identifiers":["UMLS:C0280623","MEDGEN:76132"],"synonyms":[{"name":"childhood choroid plexus neoplasm","type":"exact"},{"name":"choroid plexus neoplasm","type":"broad"},{"name":"choroid plexus neoplasm of childhood","type":"exact"},{"name":"paediatric choroid plexus neoplasm","type":"exact"},{"name":"pediatric choroid plexus neoplasm","type":"exact"}],"termid":"MONDO:0024744","xrefs":{"Monarch":{"xref_id":"0024744"}}}


id: PBO:0084779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; involved in protein refolding after import into mitochondria","termid":"PBO:0084779"}


id: PBO:0067832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 134","termid":"PBO:0067832"}


id: GO:0032727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interferon-alpha production.","definition_xrefs":["PMID:15546383","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of type I interferon production","termid":"GO:0032481"},{"relation_name":"is_a","term_name":"regulation of interferon-alpha production","termid":"GO:0032647"},{"relation_name":"positively_regulates","term_name":"interferon-alpha production","termid":"GO:0032607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interferon-alpha production","secondary_identifiers":["GO:0045356","GO:1902741"],"synonyms":[{"name":"activation of interferon-alpha production","type":"narrow"},{"name":"positive regulation of interferon-alpha biosynthetic process","type":"narrow"},{"name":"positive regulation of interferon-alpha secretion","type":"narrow"},{"name":"stimulation of interferon-alpha production","type":"narrow"},{"name":"up regulation of interferon-alpha production","type":"exact"},{"name":"up-regulation of interferon-alpha production","type":"exact"},{"name":"upregulation of interferon-alpha production","type":"exact"}],"termid":"GO:0032727"}


id: GO:0070628
data:
  {"annotated_genes":["SJAG_04633","SJAG_04211","SJAG_00837","SJAG_01528","SJAG_00591","SJAG_02503","SJAG_04484","SJAG_05329","SJAG_02625","SJAG_00054","SJAG_02900","SJAG_00941","SJAG_02244","SJAG_05252"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67701,72564,73475,75974,76004,77055,77526,78321,78701,79309,79832,79933,80844,103736],"is_not":false,"summary":null,"term":"GO:0070628"}]},"cv_name":"molecular_function","definition":"Binding to a proteasome, a large multisubunit protein complex that catalyzes protein degradation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00591":null,"SJAG_00837":null,"SJAG_00941":null,"SJAG_01528":null,"SJAG_02244":null,"SJAG_02503":null,"SJAG_02625":null,"SJAG_02900":null,"SJAG_04211":null,"SJAG_04484":null,"SJAG_04633":null,"SJAG_05252":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proteasome binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070628","terms_by_termid":{"GO:0070628":null}}


id: PBO:0044851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 132","termid":"PBO:0044851"}


id: PBO:0002675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotyrosyl phosphatase activator homolog (predicted)","termid":"PBO:0002675"}


id: PBO:0077567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 273","termid":"PBO:0077567"}


id: PBO:0072497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 26","termid":"PBO:0072497"}


id: FYPO:0004550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein phosphorylation during cellular response to HU","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004550"}


id: PBO:0090378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Ptr1-like","termid":"PBO:0090378"}


id: PBO:0054828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2241","termid":"PBO:0054828"}


id: GO:0003721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the extension of the 3' end of a DNA strand by one deoxynucleotide at a time. Cannot initiate a chain de novo; uses the RNA subunit of the telomerase enzyme complex as its template.","definition_xrefs":["PMID:11812242"],"gene_count":0,"genotype_count":0,"name":"obsolete telomerase RNA reverse transcriptase activity (obsolete GO:0003721)","synonyms":[{"name":"telomerase, catalyst","type":"exact"}],"termid":"GO:0003721"}


id: GO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the diameter of a blood vessel via the renin-angiotensin system.","definition_xrefs":["GOC:pr","PMID:10425188","ISBN:0323031951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"},{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"},{"relation_name":"part_of","term_name":"maintenance of blood vessel diameter homeostasis by renin-angiotensin","termid":"GO:0002034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"vasodilation by angiotensin involved in regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0002033"}


id: GO:0019684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The light reactions of photosynthesis, which take place in photosystems II and I. Light energy is harvested and used to power the transfer of electrons among a series of electron donors and acceptors. The final electron acceptor is NADP+, which is reduced to NADPH. NADPH generated from light reactions is used in sugar synthesis in dark reactions. Light reactions also generate a proton motive force across the thylakoid membrane, and the proton gradient is used to synthesize ATP. There are two chemical reactions involved in the light reactions: water oxidation in photosystem II, and NADP reduction in photosystem I.","definition_xrefs":["PMID:15746074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"part_of","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthesis, light reaction","secondary_identifiers":["MetaCyc:PWY-101","Wikipedia:Photolysis#Photolysis_in_photosynthesis"],"synonyms":[{"name":"photolysis","type":"related"}],"termid":"GO:0019684"}


id: GO:0004361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutaryl-CoA + 2 H+ + oxidized [electron-transfer flavoprotein] = (2E)-butenoyl-CoA + CO2 + reduced [electron-transfer flavoprotein].","definition_xrefs":["RHEA:13389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glutaryl-CoA dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0198","Reactome:R-HSA-71046","EC:1.3.8.6","MetaCyc:GLUTARYL-COA-DEHYDROGENASE-RXN"],"synonyms":[{"name":"glutaryl coenzyme A dehydrogenase activity","type":"related"}],"termid":"GO:0004361"}


id: PBO:0057235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 422a","termid":"PBO:0057235"}


id: PBO:0017774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Nnf1","termid":"PBO:0017774"}


id: PBO:0083071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroxyacetone kinase; required for detoxification of dihydroxyacetone (DHA); involved in stress adaptation","termid":"PBO:0083071"}


id: GO:0045291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of two independently transcribed RNAs, where the one that provides the 5' portion of the final mRNA is from a splice leader RNA (SL-RNA). The SL-RNA, or mini-exon donor sequence, is added to the 5'-end of the acceptor RNA molecule which provides the mRNA body.","definition_xrefs":["GOC:krc","ISBN:0879695897","PMID:2675423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA trans splicing, via spliceosome","termid":"GO:0000365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mRNA trans splicing, SL addition","synonyms":[{"name":"nuclear mRNA trans splicing, SL addition","type":"exact"},{"name":"nuclear mRNA trans splicing, spliced leader addition","type":"exact"}],"termid":"GO:0045291"}


id: PBO:0081508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 415","termid":"PBO:0081508"}


id: MOD:01926
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to one of the diastereomeric 3-hydroxy-L-aspartic acid residues.","definition_xrefs":["OMSSA:59","Unimod:35#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-aspartic acid","synonyms":[{"name":"(2S)-2-amino-3-hydroxybutanedioic acid","type":"exact"},{"name":"(2S)-3-hydroxyaspartic acid","type":"exact"},{"name":"3HyAsp","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"erythro-beta-hydroxylated L-aspartic acid","type":"exact"},{"name":"hydroxylationd","type":"exact"},{"name":"monohydroxylated aspartic acid","type":"exact"}],"termid":"MOD:01926"}


id: MONDO:1010934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in dogs due to a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb-girdle muscular dystrophy, SGCD-related, dog","secondary_identifiers":["OMIA:002122-9615"],"synonyms":[{"name":"muscular dystrophy, limb-girdle, type R6 (LGMDR6), dog","type":"related"}],"termid":"MONDO:1010934","xrefs":{"Monarch":{"xref_id":"1010934"}}}


id: PBO:0057340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 526a-1","termid":"PBO:0057340"}


id: MONDO:0007593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial spasm","secondary_identifiers":["OMIM:134300","MEDGEN:124458","UMLS:C0278151"],"synonyms":[{"name":"facial spasm","type":"exact"}],"termid":"MONDO:0007593","xrefs":{"Monarch":{"xref_id":"0007593"}}}


id: PBO:0062550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily P member 1 pseudogene","termid":"PBO:0062550"}


id: GO:0140124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Lewy body formation.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inclusion body assembly","termid":"GO:0090261"},{"relation_name":"is_a","term_name":"regulation of Lewy body formation","termid":"GO:0140122"},{"relation_name":"positively_regulates","term_name":"Lewy body formation","termid":"GO:0140121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Lewy body formation","termid":"GO:0140124"}


id: PBO:0069670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 947, pseudogene","termid":"PBO:0069670"}


id: MONDO:0054776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial focal epilepsy with variable foci","termid":"MONDO:0020310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial focal, with variable foci 4","secondary_identifiers":["MEDGEN:1644614","OMIM:617935","UMLS:C4693694","DOID:0081424"],"synonyms":[{"name":"FFEVF4","type":"related"},{"name":"epilepsy, FAMILIAL focal, with variable foci 4","type":"related"}],"termid":"MONDO:0054776","xrefs":{"Monarch":{"xref_id":"0054776"}}}


id: PBO:0060162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 10 (pseudogene)","termid":"PBO:0060162"}


id: FYPO:0000299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony (obsolete FYPO:0000299)","synonyms":[{"name":"inviable microcolony formation","type":"exact"},{"name":"microcolony formation","type":"broad"}],"termid":"FYPO:0000299"}


id: GO:2001195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysine biosynthetic process via alpha-aminoadipate and saccharopine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lysine biosynthetic process via aminoadipic acid","termid":"GO:1902987"},{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:2001194"},{"relation_name":"negatively_regulates","term_name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:0051975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"negative regulation of lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"negative regulation of lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:2001195"}


id: PBO:0054709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2118","termid":"PBO:0054709"}


id: GO:0014042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron maturation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron maturation","termid":"GO:0014041"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"positively_regulates","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron maturation","synonyms":[{"name":"activation of neuron maturation","type":"narrow"},{"name":"stimulation of neuron maturation","type":"narrow"},{"name":"up regulation of neuron maturation","type":"exact"},{"name":"up-regulation of neuron maturation","type":"exact"},{"name":"upregulation of neuron maturation","type":"exact"}],"termid":"GO:0014042"}


id: GO:0000936
data:
  {"annotated_genes":["SJAG_01835","SJAG_01290","SJAG_05285","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58657,65186,102034,117799],"is_not":false,"summary":null,"term":"GO:0000936"}]},"cv_name":"cellular_component","definition":"A cell septum that forms following nuclear division.","definition_xrefs":["ISBN:0471940526","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division septum","termid":"GO:0000935"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0000935"}],"interesting_parent_ids":["GO:0005575","GO:0000935"],"is_obsolete":false,"name":"primary cell septum","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"primary septum","type":"broad"}],"termid":"GO:0000936","terms_by_termid":{"GO:0000936":null}}


id: PBO:0040250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 5","termid":"PBO:0040250"}


id: GO:1905173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an eukaryotic translation initiation factor 2B complex.","definition_xrefs":["PMID:27023709","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B complex assembly","synonyms":[{"name":"eIF-2B assembly","type":"exact"},{"name":"eIF-2B formation","type":"exact"},{"name":"eif2B assembly","type":"exact"},{"name":"eif2B formation","type":"exact"},{"name":"eukaryotic translation initiation factor 2B complex formation","type":"exact"}],"termid":"GO:1905173"}


id: PBO:0071752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0","termid":"PBO:0071752"}


id: PBO:0076078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stereocilin pseudogene 1","termid":"PBO:0076078"}


id: PBO:0034171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_presynaptic_terminal_in","termid":"PBO:0034171"}


id: MONDO:0032753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic ataxia 9, autosomal recessive","secondary_identifiers":["OMIM:618438","MEDGEN:1680026","UMLS:C5193100"],"synonyms":[{"name":"SPASTIC ATAXIA 9, AUTOSOMAL RECESSIVE","type":"related"},{"name":"SPAX9","type":"related"}],"termid":"MONDO:0032753","xrefs":{"Monarch":{"xref_id":"0032753"}}}


id: MONDO:0009239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the FSHB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 24 without anosmia","secondary_identifiers":["GARD:10128","OMIM:229070","MESH:C537070","Orphanet:52901","SCTID:758664007","DOID:0090088","UMLS:C5574957","MEDGEN:1806136"],"synonyms":[{"name":"FSHB hypogonadotropic hypogonadism","type":"exact"},{"name":"HH24","type":"related"},{"name":"follicle-stimulating hormone deficiency, isolated","type":"related"},{"name":"hypogonadotropic hypogonadism 24 without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in FSHB","type":"exact"},{"name":"isolated FSH deficiency","type":"exact"},{"name":"isolated follicle stimulating hormone deficiency","type":"related"},{"name":"isolated follicle-stimulating hormone (FSH) deficiency","type":"related"},{"name":"isolated follicle-stimulating hormone deficiency","type":"exact"}],"termid":"MONDO:0009239","xrefs":{"Monarch":{"xref_id":"0009239"}}}


id: PBO:0013768
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CNBP","termid":"PBO:0013768"}


id: PBO:0004133
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mei4 DEpendent protein","termid":"PBO:0004133"}


id: PBO:0051174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-63 (pseudogene)","termid":"PBO:0051174"}


id: PBO:0117011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNA6 antisense RNA 1","termid":"PBO:0117011"}


id: GO:0018043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-isoleucine amide by hydrolysis and oxidation of an interior Ile-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0090"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-isoleucine amidation (obsolete GO:0018043)","termid":"GO:0018043"}


id: GO:2000396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin-dependent endocytosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-dependent endocytosis","termid":"GO:2000395"},{"relation_name":"negatively_regulates","term_name":"ubiquitin-dependent endocytosis","termid":"GO:0070086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of ubiquitin-dependent endocytosis","synonyms":[{"name":"negative regulation of ubiquitin-mediated endocytosis","type":"exact"}],"termid":"GO:2000396"}


id: MONDO:0004116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the esophagus. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C6762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"esophageal neuroendocrine tumor","termid":"MONDO:0003649"},{"relation_name":"is_a","term_name":"carcinoma of esophagus","termid":"MONDO:0019086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophageal small cell neuroendocrine carcinoma","secondary_identifiers":["DOID:7134","MEDGEN:207270","UMLS:C1112474"],"synonyms":[{"name":"Oat cell carcinoma of esophagus","type":"exact"},{"name":"Oat cell carcinoma of oesophagus","type":"exact"},{"name":"Oat cell carcinoma of the esophagus","type":"exact"},{"name":"Oat cell carcinoma of the oesophagus","type":"exact"},{"name":"esophageal Oat cell carcinoma","type":"exact"},{"name":"esophageal small cell NEC","type":"exact"},{"name":"esophageal small cell carcinoma","type":"exact"},{"name":"esophageal small cell neuroendocrine carcinoma","type":"exact"},{"name":"esophagus Oat cell carcinoma","type":"exact"},{"name":"esophagus small cell carcinoma","type":"exact"},{"name":"oesophagus Oat cell carcinoma","type":"exact"},{"name":"oesophagus small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of esophagus","type":"exact"},{"name":"small cell carcinoma of oesophagus","type":"exact"},{"name":"small cell carcinoma of the esophagus","type":"exact"},{"name":"small cell carcinoma of the oesophagus","type":"exact"},{"name":"small cell carcinoma, esophagus","type":"exact"},{"name":"small cell carcinoma, oesophagus","type":"exact"}],"termid":"MONDO:0004116","xrefs":{"Monarch":{"xref_id":"0004116"}}}


id: GO:1902846
data:
  {"annotated_genes":["SJAG_04597","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91825,96260],"is_not":false,"summary":null,"term":"GO:1902846"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic spindle elongation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid segregation","termid":"GO:0062033"},{"relation_name":"positively_regulates","term_name":"mitotic spindle elongation","termid":"GO:0000022"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic spindle elongation","type":"narrow"},{"name":"activation of spindle elongation during mitosis","type":"narrow"},{"name":"positive regulation of spindle elongation during mitosis","type":"exact"},{"name":"up regulation of mitotic spindle elongation","type":"exact"},{"name":"up regulation of spindle elongation during mitosis","type":"exact"},{"name":"up-regulation of mitotic spindle elongation","type":"exact"},{"name":"up-regulation of spindle elongation during mitosis","type":"exact"},{"name":"upregulation of mitotic spindle elongation","type":"exact"},{"name":"upregulation of spindle elongation during mitosis","type":"exact"}],"termid":"GO:1902846","terms_by_termid":{"GO:1902846":null}}


id: MONDO:1012247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone dysplasia, non-human animal","termid":"MONDO:1011982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone dysplasia, domestic cat","secondary_identifiers":["OMIA:000881-9685"],"termid":"MONDO:1012247","xrefs":{"Monarch":{"xref_id":"1012247"}}}


id: MONDO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000915 (obsolete MONDO:0000915)","termid":"MONDO:0000915","xrefs":{"Monarch":{"xref_id":"0000915"}}}


id: PBO:0049955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 1","termid":"PBO:0049955"}


id: PBO:0086394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cysteine synthase; localized to the mitochondrial outer membrane","termid":"PBO:0086394"}


id: GO:0042995
data:
  {"annotated_genes":["SJAG_01017","SJAG_01732","SJAG_05001","SJAG_03011","SJAG_04100","SJAG_04887","SJAG_02718","SJAG_03646","SJAG_04781","SJAG_00845","SJAG_03453","SJAG_02486","SJAG_00667","SJAG_02989","SJAG_03688","SJAG_02222","SJAG_01978","SJAG_00677","SJAG_01769","SJAG_02228","SJAG_03444","SJAG_05285","SJAG_01215","SJAG_00700","SJAG_02169","SJAG_00279","SJAG_04470","SJAG_04901","SJAG_02924","SJAG_01943","SJAG_04001","SJAG_03145","SJAG_01171","SJAG_04982","SJAG_03596","SJAG_00663","SJAG_02379","SJAG_01993","SJAG_00514","SJAG_04703","SJAG_01794","SJAG_04723","SJAG_02700","SJAG_00185","SJAG_00870","SJAG_02351","SJAG_00938","SJAG_04621","SJAG_01888","SJAG_04509","SJAG_03357"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59427,79028],"is_not":false,"summary":null,"term":"GO:0042995"},{"annotations":[113324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005937"},{"annotations":[118155,102033,95665,110065,121627,90913,110004,90088,103837,113275,101429,95861,97227,103838,92668,94351,116601],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[100855,89950],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070250"},{"annotations":[117948,101996,107933,96354],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032175"},{"annotations":[78084,73935,110792,100769,99594,105150,108027,75707,77335,89694,111002,94424,109088,92542,108786,92496,98736,99788,117795,71880,79560,116298,80497],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043332"},{"annotations":[112145,98237],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"},{"annotations":[81367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005902"}]},"cv_name":"cellular_component","definition":"A prolongation or process extending from a cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:jl","PMID:16318917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00279":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00845":null,"SJAG_00870":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01215":null,"SJAG_01732":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_01978":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02228":null,"SJAG_02351":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03145":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03646":null,"SJAG_03688":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04723":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell projection","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:36148799":null},"synonyms":[{"name":"cell process","type":"broad"},{"name":"cellular process","type":"broad"},{"name":"cellular projection","type":"exact"}],"termid":"GO:0042995","terms_by_termid":{"GO:0005902":null,"GO:0005937":null,"GO:0032175":null,"GO:0042995":null,"GO:0043332":null,"GO:0070250":null,"GO:0070867":null,"GO:1990819":null}}


id: MONDO:0005187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process caused by the human herpesvirus 8. This infection is associated with Kaposi sarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human herpesvirus 8 infection","secondary_identifiers":["UMLS:C1512508","EFO:0002612","MEDGEN:268211","NCIT:C39291"],"synonyms":[{"name":"HHV8 infection","type":"exact"},{"name":"Human Herpes Virus 8 infection","type":"exact"},{"name":"Human Herpesvirus 8 infection","type":"exact"}],"termid":"MONDO:0005187","xrefs":{"Monarch":{"xref_id":"0005187"}}}


id: PBO:0055695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIX1L antisense RNA 1","termid":"PBO:0055695"}


id: FYPO:0006961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of inosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular inosine level","synonyms":[{"name":"increased cellular inosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular inosine level during vegetative growth","type":"exact"},{"name":"increased inosine accumulation","type":"related"}],"termid":"FYPO:0006961"}


id: PBO:0108565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease non-catalytic (ERCC1) subunit Swi10","termid":"PBO:0108565"}


id: MONDO:0008189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign neoplasm that arises in the area of the nipple. Clinically, it usually presents as a tender erythematous crusting lesion with hardening of the nipple. Morphologically, there is proliferation of ducts lined with epithelial and myoepithelial cells and focal erosion of the epidermis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillomatosis, florid, of nipple","secondary_identifiers":["MESH:C537167","NCIT:C4383","SCTID:237467005","OMIM:167950","UMLS:C1868647","MEDGEN:401492"],"synonyms":[{"name":"erosive adenomatosis of nipple","type":"exact"},{"name":"erosive adenomatosis of the nipple","type":"related"},{"name":"erosive nipple adenomatosis","type":"exact"},{"name":"florid papillomatosis","type":"related"},{"name":"florid papillomatosis of the nipple","type":"related"},{"name":"papillomatosis florid of nipple","type":"related"},{"name":"papillomatosis, florid, of nipple","type":"exact"}],"termid":"MONDO:0008189","xrefs":{"Monarch":{"xref_id":"0008189"}}}


id: GO:0021757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the caudate nucleus over time from its initial formation until its mature state. The caudate nucleus is the C-shaped structures of the striatum containing input neurons involved with control of voluntary movement in the brain.","definition_xrefs":["ISBN:0878937420","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudate nucleus development","termid":"GO:0021757"}


id: FYPO:0000884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","termid":"FYPO:0000865"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000884"}


id: GO:0120519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-methionyl-[tubulin] = CoA + H+ + N-terminal N(alpha)-acetyl-L-methionyl-[tubulin]. The N-terminus of both alpha- and beta-tubulin are acetylated.","definition_xrefs":["EC:2.3.1.308","RHEA:69607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N-terminal amino-acid acetyltransferase activity","termid":"GO:0004596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740","GO:0034212"],"is_obsolete":false,"name":"tubulin N-terminal-methionine acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R12978","MetaCyc:RXN-22633"],"synonyms":[{"name":"tubulin N-terminal N-acetyltransferase activity","type":"exact"}],"termid":"GO:0120519"}


id: PBO:0083692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme regulator; involved in synthesis of phosphatidylinositol 3,5-bisphosphate, in control of trafficking of some proteins to the vacuole lumen via the MVB, and in maintenance of vacuole size and acidity; binds negative (Fig4p) and positive (Fab1p) regulators of PtdIns(3,5)P(2) to control endolysosome function; similar to mammalian Vac14p","termid":"PBO:0083692"}


id: PBO:0074421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 20","termid":"PBO:0074421"}


id: PBO:0060606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 2","termid":"PBO:0060606"}


id: MONDO:0010019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"selective IgA deficiency disease","termid":"MONDO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"secretory component deficiency","secondary_identifiers":["MESH:C562869","SCTID:234554004","UMLS:C0398709","MEDGEN:140769","OMIM:269650","ICD9:279.03"],"synonyms":[{"name":"IgA deficiency, secretory","type":"related"},{"name":"secretory component deficiency","type":"exact"}],"termid":"MONDO:0010019","xrefs":{"Monarch":{"xref_id":"0010019"}}}


id: GO:2000794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000794"}


id: PBO:0087372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Squalene epoxidase; catalyzes the epoxidation of squalene to 2,3-oxidosqualene; plays an essential role in the ergosterol-biosynthesis pathway and is the specific target of the antifungal drug terbinafine; human SQLE functionally complements the lethality of the erg1 null mutation","termid":"PBO:0087372"}


id: PBO:0004116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfide-quinone oxidoreductase","termid":"PBO:0004116"}


id: PBO:0069391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 651, pseudogene","termid":"PBO:0069391"}


id: MONDO:0001584
data:
  {"annotated_genes":["SJAG_04003","SJAG_02658","SJAG_04183","SJAG_04816","SJAG_04665","SJAG_02050","SJAG_06022","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"},{"annotations":[86947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[88346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[86980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[87349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[88161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[86942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[88232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[87874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02050":null,"SJAG_02658":null,"SJAG_04003":null,"SJAG_04183":null,"SJAG_04665":null,"SJAG_04816":null,"SJAG_06022":null},"genotype_count":0,"is_obsolete":false,"name":"ocular motility disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:1279","ICD9:378.9","EFO:1001990","MEDGEN:14457","SCTID:45030009","UMLS:C0028850"],"synonyms":[{"name":"disorder of eye movements","type":"exact"},{"name":"eye movement disorder","type":"exact"}],"termid":"MONDO:0001584","terms_by_termid":{"MONDO:0009783":null,"MONDO:0010912":null,"MONDO:0012238":null,"MONDO:0013117":null,"MONDO:0014062":null,"MONDO:0014656":null,"MONDO:0020845":null,"MONDO:0024528":null,"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0001584"}}}


id: PBO:0049890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 9","termid":"PBO:0049890"}


id: MONDO:0010126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymic aplasia with fetal death","secondary_identifiers":["UMLS:C1848815","OMIM:274210","MESH:C564768","MEDGEN:341312"],"synonyms":[{"name":"thymic aplasia with fetal death","type":"exact"}],"termid":"MONDO:0010126","xrefs":{"Monarch":{"xref_id":"0010126"}}}


id: GO:0052360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont macromolecule (obsolete GO:0052360)","termid":"GO:0052360"}


id: FYPO:0007396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of heme into the cell occurs to a lower extent than normal.","definition_xrefs":["GO:0140420","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased heme import","synonyms":[{"name":"decreased haem import","type":"exact"},{"name":"decreased heme import during mitotic cell cycle","type":"related"},{"name":"decreased heme import during vegetative growth","type":"exact"},{"name":"decreased heme import into cell","type":"exact"},{"name":"reduced heme import","type":"exact"}],"termid":"FYPO:0007396"}


id: GO:0033584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-tyrosine from other compounds, including chorismate, via the intermediate L-arogenate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-tyrosine biosynthetic process from chorismate via L-arogenate","secondary_identifiers":["MetaCyc:PWY-3461"],"synonyms":[{"name":"L-tyrosine anabolism from chorismate via L-arogenate","type":"exact"},{"name":"L-tyrosine formation from chorismate via L-arogenate","type":"exact"},{"name":"L-tyrosine synthesis from chorismate via L-arogenate","type":"exact"},{"name":"tyrosine biosynthetic process from chorismate via L-arogenate","type":"broad"}],"termid":"GO:0033584"}


id: GO:0140587
data:
  {"annotated_genes":["SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140585"}]},"cv_name":"molecular_function","definition":"Bridging together two DNA loop anchors together, maintaining a chromatin loop.","definition_xrefs":["PMID:32213323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin DNA binding","termid":"GO:0031490"},{"relation_name":"is_a","term_name":"DNA-DNA tethering activity","termid":"GO:0106260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003677","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chromatin loop anchoring activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA loop binding","type":"exact"},{"name":"chromosomal loop binding","type":"exact"}],"termid":"GO:0140587","terms_by_termid":{"GO:0140585":null}}


id: FYECO:0000237
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown for more than 48 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth >48 hrs","synonyms":[{"name":"growth >48 hours","type":"exact"}],"termid":"FYECO:0000237"}


id: GO:0006708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecdysone, (22R)-2-beta,3-beta,14,22,25-pentahydroxycholest-7-en-6-one, an ecdysteroid found in insects.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ecdysone metabolic process","termid":"GO:0008205"},{"relation_name":"is_a","term_name":"sterol catabolic process","termid":"GO:0016127"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"ecdysteroid catabolic process","termid":"GO:0046344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"ecdysone catabolic process","synonyms":[{"name":"ecdysone breakdown","type":"exact"},{"name":"ecdysone catabolism","type":"exact"},{"name":"ecdysone degradation","type":"exact"}],"termid":"GO:0006708"}


id: GO:0160179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which iron is taken up from the contents of the intestine.","definition_xrefs":["PMID:16054062","PMID:17729393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal iron absorption","termid":"GO:0160179"}


id: PATO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A degree of pigmentation quality inhering in a bearer by virtue of the bearer's lacking substances produced by living organisms that have a color resulting from selective color absorption.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"degree of pigmentation","termid":"PATO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unpigmented","synonyms":[{"name":"depigmented","type":"exact"}],"termid":"PATO:0002249"}


id: GO:0042617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of paclitaxel, a tetracyclic diterpenoid isolated originally from the bark of the Pacific yew tree, Taxus brevifolia.","definition_xrefs":["GOC:krc","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"paclitaxel biosynthetic process","secondary_identifiers":["GO:0042616"],"synonyms":[{"name":"paclitaxel anabolism","type":"exact"},{"name":"paclitaxel biosynthesis","type":"exact"},{"name":"paclitaxel formation","type":"exact"},{"name":"paclitaxel metabolic process","type":"broad"},{"name":"paclitaxel metabolism","type":"broad"},{"name":"paclitaxel synthesis","type":"exact"},{"name":"taxol biosynthesis","type":"narrow"},{"name":"taxol biosynthetic process","type":"narrow"},{"name":"taxol metabolic process","type":"broad"},{"name":"taxol metabolism","type":"broad"}],"termid":"GO:0042617"}


id: PBO:0087451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex that inhibits sister chromatid cohesion; also negatively regulates chromosome condensation; inhibited by Eco1p-acetylated cohesin subunits Smc3p and Mcd1p; binds Smc3p ATPase head of cohesin; related to the human Wapl protein that controls the association of cohesin with chromatin","termid":"PBO:0087451"}


id: PBO:0081470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 343","termid":"PBO:0081470"}


id: PBO:0045821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 11","termid":"PBO:0045821"}


id: PBO:0044585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drebrin like","termid":"PBO:0044585"}


id: MONDO:0013919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 12","secondary_identifiers":["DOID:0111313","OMIM:614847","MEDGEN:766773","UMLS:C3553859"],"synonyms":[{"name":"EIG12","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 12","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 12","type":"exact"},{"name":"susceptibility to idiopathic generalised epilepsy 12","type":"related"},{"name":"susceptibility to idiopathic generalized epilepsy 12","type":"related"}],"termid":"MONDO:0013919","xrefs":{"Monarch":{"xref_id":"0013919"}}}


id: PBO:0073045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 3","termid":"PBO:0073045"}


id: FYPO:0006941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to actin cortical patches for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cortical patch","termid":"FYPO:0000742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein localization to actin cortical patch","synonyms":[{"name":"increased duration of protein localisation to actin cortical patch","type":"exact"},{"name":"increased duration of protein localization to F-actin patch","type":"exact"},{"name":"increased duration of protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to actin cortical patch involved in mitotic cytokinesis","type":"exact"},{"name":"increased duration of protein localization to actin patch","type":"exact"}],"termid":"FYPO:0006941"}


id: PBO:0041459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 88","termid":"PBO:0041459"}


id: MONDO:0010668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skeletal dysplasia-intellectual disability syndrome combines skeletal anomalies (short stature, ridging of the metopic suture, fusion of cervical vertebrae, thoracic hemivertebrae, scoliosis, sacral hypoplasia and short middle phalanges) and mild intellectual deficit. It has been described in four male cousins in three sibships. Glucose intolerance was present in three cases, and imperforated anus in one case. Carrier females had minor manifestations (fusion of cervical vertebrae and glucose intolerance). Transmission seems to be X-linked.","definition_xrefs":["Orphanet:1436"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia-intellectual disability syndrome","secondary_identifiers":["GARD:3520","UMLS:C1839729","OMIM:309620","SCTID:722478008","MEDGEN:326949","MESH:C564101"],"synonyms":[{"name":"Christian syndrome","type":"exact"},{"name":"MRSD","type":"related"},{"name":"X-linked skeletal dysplasia-intellectual disability syndrome","type":"related"},{"name":"intellectual disability skeletal dysplasia abducens palsy","type":"related"},{"name":"intellectual disability, skeletal dysplasia, and abducens palsy","type":"related"},{"name":"mental retardation skeletal dysplasia abducens palsy","type":"related"},{"name":"mental retardation, skeletal dysplasia, and abducens palsy","type":"related"},{"name":"mental retardation-skeletal dysplasia","type":"exact"}],"termid":"MONDO:0010668","xrefs":{"Monarch":{"xref_id":"0010668"}}}


id: PBO:0080013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 15","termid":"PBO:0080013"}


id: PBO:0027655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation_during_mitotic_G2_phase","termid":"PBO:0027655"}


id: PBO:0028930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_growing_cell_tip","termid":"PBO:0028930"}


id: PR:Q9USM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.10c","secondary_identifiers":["UniProtKB:Q9USM6"],"synonyms":[{"name":"Spom972h-CYB5A","type":"exact"}],"termid":"PR:Q9USM6"}


id: GO:0008968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-sedoheptulose-7-phosphate = D-alpha,beta-D-heptose 7-phosphate.","definition_xrefs":["MetaCyc:RXN0-4301","PMID:8631969","PMID:11279237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-sedoheptulose 7-phosphate isomerase activity","secondary_identifiers":["RHEA:27489"],"synonyms":[{"name":"phosphoheptose isomerase activity","type":"exact"}],"termid":"GO:0008968"}


id: GO:0038065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by collagen binding to a cell surface receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","GOC:uh","PMID:21568710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"collagen-activated signaling pathway","synonyms":[{"name":"collagen-activated signalling pathway","type":"exact"}],"termid":"GO:0038065"}


id: MONDO:0005951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sarcocystosis (obsolete MONDO:0005951)","termid":"MONDO:0005951","xrefs":{"Monarch":{"xref_id":"0005951"}}}


id: PBO:0082543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein related to glucanases localized in birth scars; possibly involved in cell wall septation; member of the SUN family; SUN4 has a paralog, SIM1, that arose from the whole genome duplication","termid":"PBO:0082543"}


id: PBO:0038740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin maturation protease","termid":"PBO:0038740"}


id: MONDO:0008837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia, deafness, and cardiomyopathy","secondary_identifiers":["MEDGEN:395312","MESH:C565932","OMIM:208750","UMLS:C1859645"],"synonyms":[{"name":"ataxia, deafness, and cardiomyopathy","type":"exact"}],"termid":"MONDO:0008837","xrefs":{"Monarch":{"xref_id":"0008837"}}}


id: PBO:0062836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 2","termid":"PBO:0062836"}


id: PBO:0029532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_septum","termid":"PBO:0029532"}


id: PBO:0036323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get3 (predicted)","termid":"PBO:0036323"}


id: PBO:0042858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 74","termid":"PBO:0042858"}


id: GO:0051078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the controlled breakdown of the nuclear membranes during meiotic cell division occurs.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane disassembly","termid":"GO:0051081"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic nuclear membrane disassembly","synonyms":[{"name":"meiotic nuclear envelope breakdown","type":"related"},{"name":"meiotic nuclear envelope catabolism","type":"related"},{"name":"meiotic nuclear envelope degradation","type":"related"},{"name":"meiotic nuclear envelope disassembly","type":"related"}],"termid":"GO:0051078"}


id: GO:0020036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A disk-like structure that appears at the periphery of a red blood cell infected by an apicomplexan parasite, characterized by a translucent lumen and an electron-dense coat of variable thickness; often appears to be tethered to the host cell membrane by fibrous connections with the erythrocyte cytoskeleton.","definition_xrefs":["PMID:16705161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Maurer's cleft","synonyms":[{"name":"Maurers cleft","type":"exact"}],"termid":"GO:0020036"}


id: MONDO:0009981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinitis pigmentosa type 1 (obsolete MONDO:0009981)","termid":"MONDO:0009981","xrefs":{"Monarch":{"xref_id":"0009981"}}}


id: PBO:0109041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD reductase Coq12","termid":"PBO:0109041"}


id: SO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence [5'-TCG(G/C)(A/T)xxTTxAA], bound by the transcription factor Pho7.","definition_xrefs":["PMID:28811350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho7_binding_site","synonyms":[{"name":"Pho7 binding site","type":"exact"}],"termid":"SO:0002216"}


id: GO:0036382
data:
  {"annotated_genes":["SJAG_01668"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89520],"is_not":false,"summary":null,"term":"GO:0036382"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a reduced flavin + NAD+ = an oxidized flavin + 2 H+ + NADH.","definition_xrefs":["RHEA:31303","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"flavin reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12446","KEGG_REACTION:R09662","EC:1.5.1.36"],"termid":"GO:0036382","terms_by_termid":{"GO:0036382":null}}


id: PBO:0066247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 3","termid":"PBO:0066247"}


id: PBO:0043978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSAG family member 4 (pseudogene)","termid":"PBO:0043978"}


id: MONDO:1010848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in sheep due to a mutation in the GLB1 gene. There is a buildup of GM1 gangliosides in tissues due to a lack of the enzyme beta-galactosidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000402-9940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, non-human animal","termid":"MONDO:1010167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM1 gangliosidosis GLB1-related, sheep","synonyms":[{"name":"gangliosidosis GM1, sheep","type":"related"}],"termid":"MONDO:1010848","xrefs":{"Monarch":{"xref_id":"1010848"}}}


id: PBO:0027494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_wortmannin","termid":"PBO:0027494"}


id: PBO:0029599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sodium:hydrogen_antiporter_activity","termid":"PBO:0029599"}


id: PBO:0116316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase F(o) subunit J, Atp18","termid":"PBO:0116316"}


id: PBO:0085934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; protein identified via enrichment-based proteogenomics; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0085934"}


id: PR:O94282
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytoplasmic tRNA 2-thiolation protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03335","PANTHER:PTHR11807:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tRNA 2-thiolation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.03","secondary_identifiers":["UniProtKB:O94282"],"synonyms":[{"name":"Spom972h-CTU1","type":"exact"},{"name":"cytoplasmic tRNA adenylyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94282"}


id: CHEBI:17489
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"3',5'-cyclic purine nucleotide having having adenine as the nucleobase.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-cyclic AMP","secondary_identifiers":["CHEBI:19827","CHEBI:1325","CHEBI:41588","CHEBI:11673"],"termid":"CHEBI:17489"}


id: PBO:0112001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh2","termid":"PBO:0112001"}


id: PBO:0064316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 5","termid":"PBO:0064316"}


id: MOD:00922
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Cy3 CyDye DIGE Fluor saturation dye","synonyms":[{"name":"Cy3 CyDye DIGE Fluor saturation dye","type":"related"},{"name":"CyDye-Cy3","type":"related"}],"termid":"MOD:00922"}


id: GO:1901199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of calcium ion transport into cytosol that is involved in cellular response to salt stress.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport into cytosol","termid":"GO:0010524"},{"relation_name":"part_of","term_name":"cellular response to salt stress","termid":"GO:0071472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion transport into cytosol involved in cellular response to salt stress","synonyms":[{"name":"positive regulation of calcium ion transport into cytosol involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"positive regulation of calcium ion transport into cytosol involved in cellular salinity response","type":"exact"}],"termid":"GO:1901199"}


id: GO:0075325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism disseminates its spores.","definition_xrefs":["Wikipedia:Spore"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore dispersal","secondary_identifiers":["GO:0075326","GO:0075327"],"synonyms":[{"name":"active spore dispersal on or near host","type":"narrow"},{"name":"active spore dispersal on or near host during symbiotic interaction","type":"narrow"},{"name":"passive spore dispersal on or near host","type":"narrow"},{"name":"spore dispersal on or near host","type":"narrow"},{"name":"spore dispersal on or near host during symbiotic interaction","type":"exact"}],"termid":"GO:0075325"}


id: FYPO:0000097
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121245,121450,121462,121484],"is_not":false,"summary":null,"term":"FYPO:0000097"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to caffeine. Cells stop growing (and may die) at a concentration of caffeine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02527":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":4,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to caffeine during vegetative growth","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_04312","SJAG_00266","SJAG_02527","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","pka1delta","atf1delta"],"synonyms":[{"name":"hypersensitive to caffeine during vegetative growth","type":"exact"},{"name":"sensitive to caffeine during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000097","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000097":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null}}


id: PBO:0058585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6718","termid":"PBO:0058585"}


id: PBO:0055992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and WD repeat domain containing 1","termid":"PBO:0055992"}


id: MONDO:1011345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Poisoning that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poisoning, non-human animal","termid":"MONDO:1011345","xrefs":{"Monarch":{"xref_id":"1011345"}}}


id: PBO:0046355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 13","termid":"PBO:0046355"}


id: GO:0043322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of natural killer cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of natural killer cell degranulation","termid":"GO:0043321"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045953"},{"relation_name":"negatively_regulates","term_name":"natural killer cell degranulation","termid":"GO:0043320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell degranulation","synonyms":[{"name":"down regulation of natural killer cell degranulation","type":"exact"},{"name":"down-regulation of natural killer cell degranulation","type":"exact"},{"name":"downregulation of natural killer cell degranulation","type":"exact"},{"name":"inhibition of natural killer cell degranulation","type":"narrow"},{"name":"negative regulation of NK cell degranulation","type":"exact"},{"name":"negative regulation of NK cell granule exocytosis","type":"exact"},{"name":"negative regulation of natural killer cell granule exocytosis","type":"exact"}],"termid":"GO:0043322"}


id: PATO:0001403
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to produce differentiated cell types of all three primary germ layers but not extraembryonic cell types.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Pluripotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pluripotent","termid":"PATO:0001403"}


id: FYPO:0003833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell proceeds normally through a specific cell cycle phase. A cell cycle phase is any of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GO:0022403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle","termid":"FYPO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle phase","termid":"FYPO:0003833"}


id: MONDO:0010068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disorder characterized by bone marrow failure, spinal abnormalities, saddle nose, and metaphysical striation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, sponastrime type","secondary_identifiers":["ICD9:756.9","MEDGEN:266247","UMLS:C1300260","DOID:5684","MESH:C535786","GARD:4970","NCIT:C129031","Orphanet:93357","OMIM:271510","SCTID:389161008"],"synonyms":[{"name":"Sponastrime dysplasia","type":"related"},{"name":"short limb dwarfism with saddle nose, spinal alterations, and metaphyseal striation","type":"related"},{"name":"short-limb dwarfism with saddle Nose, spinal alterations, and metaphyseal striation","type":"related"},{"name":"sponastrime dysplasia","type":"exact"},{"name":"spondylar and nasal alterations with striated metaphyses","type":"related"},{"name":"spondylar and nasal alterations-striated metaphyses syndrome","type":"exact"},{"name":"spondylar and nasal changes with striations of the metaphyses (SPONASTRIME) dysplasia","type":"exact"},{"name":"spondylar and nasal changes with triations of the metaphyses (SPONASTRIME) dysplasia","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia Sponastrime type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Sponastrime type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, sponastrime type","type":"exact"}],"termid":"MONDO:0010068","xrefs":{"Monarch":{"xref_id":"0010068"}}}


id: PR:Q9URV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A platelet-activating factor acetylhydrolase 2, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.11c","secondary_identifiers":["UniProtKB:Q9URV1"],"synonyms":[{"name":"1-alkyl-2-acetylglycerophosphocholine esterase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-acetyl-1-alkylglycerophosphocholine esterase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PAFAH2","type":"exact"}],"termid":"PR:Q9URV1"}


id: GO:2000536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of entry of bacterium into host cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of entry of bacterium into host cell","termid":"GO:2000535"},{"relation_name":"negatively_regulates","term_name":"entry of bacterium into host cell","termid":"GO:0035635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of entry of bacterium into host cell","synonyms":[{"name":"negative regulation of bacterial entry into host cell","type":"exact"},{"name":"negative regulation of invasion of bacteria into host cell","type":"exact"}],"termid":"GO:2000536"}


id: PR:Q09875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gms2 gene.","definition_xrefs":["UniProtKB:Q09875","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.12","synonyms":[{"name":"Spom972h-gms2","type":"exact"}],"termid":"PR:Q09875"}


id: MONDO:0026723
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87723],"is_not":false,"summary":null,"term":"MONDO:0026723"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked 108","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1680544","DOID:0111844","UMLS:C5193009","OMIM:301024"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED 108","type":"related"},{"name":"MRX108","type":"related"},{"name":"Mental Retardation, X-Linked 108","type":"related"},{"name":"intellectual developmental disorder, X-linked 108, X-linked recessive","type":"exact"}],"termid":"MONDO:0026723","terms_by_termid":{"MONDO:0026723":null},"xrefs":{"Monarch":{"xref_id":"0026723"}}}


id: FYPO:0005331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-prone translesion synthesis occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:20453833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-prone translesion synthesis","termid":"FYPO:0003892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000293","FYPO:0000298"],"is_obsolete":false,"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"decreased error-prone translesion synthesis across TT-(6-4)","type":"exact"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"}],"termid":"FYPO:0005331"}


id: GO:0048041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation and bonding together of a set of components to form a focal adhesion, a complex of intracellular signaling and structural proteins that provides a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity.","definition_xrefs":["GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction assembly","termid":"GO:0007044"},{"relation_name":"part_of","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"focal adhesion assembly","synonyms":[{"name":"adhesion plaque assembly","type":"related"},{"name":"focal adhesion formation","type":"related"}],"termid":"GO:0048041"}


id: GO:0032252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a secretory granule is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"secretory granule localization","synonyms":[{"name":"secretory granule clustering","type":"related"},{"name":"secretory granule localisation","type":"exact"}],"termid":"GO:0032252"}


id: GO:0042132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"fructose 1,6-bisphosphate 1-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-70479","MetaCyc:F16BDEPHOS-RXN","RHEA:11064"],"synonyms":[{"name":"D-fructose 1,6-diphosphatase activity","type":"related"},{"name":"D-fructose-1,6-bisphosphate 1-phosphohydrolase activity","type":"related"},{"name":"D-fructose-1,6-bisphosphate phosphatase activity","type":"related"},{"name":"FBPase activity","type":"related"},{"name":"fructose 1,6-bisphosphatase activity","type":"related"},{"name":"fructose 1,6-bisphosphate phosphatase activity","type":"related"},{"name":"fructose 1,6-diphosphatase activity","type":"related"},{"name":"fructose 1,6-diphosphate phosphatase activity","type":"related"},{"name":"fructose bisphosphate phosphatase activity","type":"related"},{"name":"fructose diphosphatase activity","type":"related"},{"name":"fructose diphosphate phosphatase activity","type":"related"},{"name":"fructose-1,6-bisphosphatase activity","type":"related"},{"name":"fructose-bisphosphatase activity","type":"broad"},{"name":"hexose bisphosphatase activity","type":"related"},{"name":"hexose diphosphatase activity","type":"related"},{"name":"hexosediphosphatase activity","type":"broad"}],"termid":"GO:0042132"}


id: PBO:0046065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K","termid":"PBO:0046065"}


id: FYPO:0002332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to Golgi apparatus","synonyms":[{"name":"normal protein localisation to Golgi apparatus","type":"exact"},{"name":"normal protein localization to Golgi apparatus during mitotic cell cycle","type":"related"},{"name":"normal protein localization to Golgi apparatus during vegetative growth","type":"exact"}],"termid":"FYPO:0002332"}


id: MONDO:0020167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malposition of external canthus (obsolete MONDO:0020167)","secondary_identifiers":["Orphanet:98576"],"termid":"MONDO:0020167","xrefs":{"Monarch":{"xref_id":"0020167"}}}


id: PBO:0085170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oleate-activated transcription factor; subunit of a heterodimeric complex with Pip2p, which binds to oleate-response elements (ORE) in the promoter of genes involved in beta-oxidation of fatty acids, peroxisome organization and biogenesis, activating transcription in the presence of oleate; regulates chromatin silencing at telomeres; involved in diauxic shift; OAF1 has a paralog, PIP2, that arose from the whole genome duplication","termid":"PBO:0085170"}


id: GO:0007307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Amplification by up to 60-fold of the loci containing the chorion gene clusters. Amplification is necessary for the rapid synthesis of chorion proteins by the follicle cells, and occurs by repeated firing of one or more origins located within each gene cluster.","definition_xrefs":["GOC:mtg_sensu","PMID:11157771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA amplification","termid":"GO:0006277"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"eggshell chorion gene amplification","termid":"GO:0007307"}


id: GO:0021790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the branchial arch mesenchyme is directed to a specific target site in the branchial arch mesenchyme in response to a repulsive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","PMID:14699587","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in branchial arch mesenchyme","termid":"GO:0021789"},{"relation_name":"is_a","term_name":"chemorepulsion of branchiomotor axon","termid":"GO:0021793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of branchiomotor neuron axon in branchial arch mesenchyme","synonyms":[{"name":"negative chemotaxis of branchiomotor neuron axon in branchial arch mesenchyme","type":"exact"}],"termid":"GO:0021790"}


id: GO:0075075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of the symbiont adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont adenylate cyclase activity (obsolete GO:0075075)","termid":"GO:0075075"}


id: PBO:0005765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku domain protein Pku70","termid":"PBO:0005765"}


id: GO:0033860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of the enzyme NAD(P)H oxidase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NAD(P)H oxidase activity","termid":"GO:0033860"}


id: PBO:0060152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor in rescue","termid":"PBO:0060152"}


id: PBO:0002916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VanZ-like family protein","termid":"PBO:0002916"}


id: PBO:0113220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein; binds to the 3'UTR of cell wall-related mRNAs and stabilizes these mRNAs, acting in parallel to cell wall integrity signaling to maintain expression of cell wall genes during stress; acts antagonistically to Nab6p; deletion mutants display increased sensitivity to some cell wall disrupting agents; expression negatively regulated by cAMP","termid":"PBO:0113220"}


id: PR:Q9HDZ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dam1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDZ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dam1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.08c","synonyms":[{"name":"Spom972h-dam1","type":"exact"},{"name":"outer kinetochore protein dam1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDZ6"}


id: PBO:0038395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-affected_by","termid":"PBO:0038395"}


id: PBO:0052097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel modulatory factor 1","termid":"PBO:0052097"}


id: MONDO:0004369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal infectious disease","secondary_identifiers":["ICD9:590.9","DOID:782","UMLS:C0021313","ICD9:590","MEDGEN:507844"],"termid":"MONDO:0004369","xrefs":{"Monarch":{"xref_id":"0004369"}}}


id: GO:0000025
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103494,103495],"is_not":false,"summary":null,"term":"GO:0000025"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the disaccharide maltose (4-O-alpha-D-glucopyranosyl-D-glucopyranose).","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose metabolic process","termid":"GO:0000023"},{"relation_name":"is_a","term_name":"disaccharide catabolic process","termid":"GO:0046352"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"maltose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:MALTOSECAT-PWY"],"synonyms":[{"name":"malt sugar catabolic process","type":"exact"},{"name":"malt sugar catabolism","type":"exact"},{"name":"maltose breakdown","type":"exact"},{"name":"maltose degradation","type":"exact"},{"name":"maltose hydrolysis","type":"narrow"}],"termid":"GO:0000025","terms_by_termid":{"GO:0000025":null}}


id: GO:0034823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citronellate + CoASH + ATP = citronellyl-CoA + AMP + PPi.","definition_xrefs":["UM-BBD_reactionID:r1157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"citronellyl-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R08088"],"termid":"GO:0034823"}


id: GO:1901467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ferulate catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of ferulate catabolic process","termid":"GO:1901466"},{"relation_name":"negatively_regulates","term_name":"ferulate catabolic process","termid":"GO:1901067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ferulate catabolic process","synonyms":[{"name":"down regulation of ferulate breakdown","type":"exact"},{"name":"down regulation of ferulate catabolic process","type":"exact"},{"name":"down regulation of ferulate catabolism","type":"exact"},{"name":"down regulation of ferulate degradation","type":"exact"},{"name":"down-regulation of ferulate breakdown","type":"exact"},{"name":"down-regulation of ferulate catabolic process","type":"exact"},{"name":"down-regulation of ferulate catabolism","type":"exact"},{"name":"down-regulation of ferulate degradation","type":"exact"},{"name":"downregulation of ferulate breakdown","type":"exact"},{"name":"downregulation of ferulate catabolic process","type":"exact"},{"name":"downregulation of ferulate catabolism","type":"exact"},{"name":"downregulation of ferulate degradation","type":"exact"},{"name":"inhibition of ferulate breakdown","type":"exact"},{"name":"inhibition of ferulate catabolic process","type":"narrow"},{"name":"inhibition of ferulate catabolism","type":"exact"},{"name":"inhibition of ferulate degradation","type":"exact"},{"name":"negative regulation of ferulate breakdown","type":"exact"},{"name":"negative regulation of ferulate catabolism","type":"exact"},{"name":"negative regulation of ferulate degradation","type":"exact"}],"termid":"GO:1901467"}


id: _global:starts_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_during","secondary_identifiers":["RO:0002091"],"termid":"_global:starts_during"}


id: PBO:0059463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSH2 overlapping transcript 1","termid":"PBO:0059463"}


id: PBO:0058284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4660","termid":"PBO:0058284"}


id: PBO:0067165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 218, pseudogene","termid":"PBO:0067165"}


id: GO:0034001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exolytic cleavage of disaccharide residues from the non-reducing ends of both polymeric chondroitin sulfates and their oligosaccharide fragments.","definition_xrefs":["EC:4.2.2.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"chondroitin-sulfate-ABC exolyase activity","secondary_identifiers":["MetaCyc:4.2.2.21-RXN"],"synonyms":[{"name":"ChS ABC lyase II activity","type":"related"},{"name":"ChS ABC lyase activity","type":"broad"},{"name":"chondroitin ABC eliminase activity","type":"broad"},{"name":"chondroitin sulfate ABC exoeliminase activity","type":"related"},{"name":"chondroitin sulfate ABC exolyase activity","type":"related"},{"name":"chondroitin sulfate ABC lyase activity","type":"broad"},{"name":"chondroitinase ABC activity","type":"broad"},{"name":"chondroitinase activity","type":"broad"}],"termid":"GO:0034001"}


id: GO:0044168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The irregular network of unit membranes, visible only by electron microscopy, that occurs in the host cell cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The host rough ER has ribosomes adhering to the outer surface.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell rough endoplasmic reticulum","synonyms":[{"name":"host rough endoplasmic reticulum","type":"exact"}],"termid":"GO:0044168"}


id: GO:0160217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription initiation-coupled chromatin remodeling.","definition_xrefs":["PMID:33980486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"negative regulation of chromatin organization","termid":"GO:1905268"},{"relation_name":"negatively_regulates","term_name":"transcription initiation-coupled chromatin remodeling","termid":"GO:0045815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"negative regulation of transcription initiation-coupled chromatin remodeling","termid":"GO:0160217"}


id: FYPO:0005372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which circular minichromosomes are lost at a higher frequency than normal during the vegetative growth phase of the life cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah","PMID:11226171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss during vegetative growth","termid":"FYPO:0001840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased circular minichromosome loss during vegetative growth","synonyms":[{"name":"increased circular minichromosome loss during mitotic cell cycle","type":"related"},{"name":"mitotic circular minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0005372"}


id: MONDO:0007104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis-parkinsonism-dementia complex","secondary_identifiers":["DOID:0111246","GARD:9239","OMIM:105500","Orphanet:90020","MEDGEN:107775","UMLS:C0543859","ICD10CM:G12.2"],"synonyms":[{"name":"ALS-pDC","type":"related"},{"name":"Guam disease","type":"exact"},{"name":"Lytico-Bodig disease","type":"exact"},{"name":"Lytigo-Bodig disease","type":"exact"},{"name":"PDALS","type":"exact"},{"name":"Parkinsonism-dementia-ALS complex","type":"exact"},{"name":"amyotrophic lateral sclerosis, Parkinsonism/dementia complex of Guam","type":"related"},{"name":"amyotrophic lateral sclerosis-PARKINSONISM/dementia complex 1","type":"related"},{"name":"amyotrophic lateral sclerosis-Parkinsonism/dementia Complex of Guam","type":"related"},{"name":"amyotrophic lateral sclerosis-Parkinsonism/dementia Complex type 1","type":"exact"},{"name":"amyotrophic lateral sclerosis-parkinsonism-dementia of Guam syndrome","type":"exact"},{"name":"amyotrophic lateral sclerosis-parkinsonism/dementia complex, susceptibility to","type":"related"}],"termid":"MONDO:0007104","xrefs":{"Monarch":{"xref_id":"0007104"}}}


id: PBO:0075050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-13","termid":"PBO:0075050"}


id: GO:0008191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0004857","GO:0030234","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"metalloendopeptidase inhibitor activity","synonyms":[{"name":"metalloprotease inhibitor","type":"narrow"},{"name":"metalloproteinase inhibitor","type":"narrow"}],"termid":"GO:0008191"}


id: GO:0097171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ADP-L-glycero-beta-D-manno-heptose, an ADP-L-glycero-D-manno-heptose having beta-configuration at the anomeric centre of the heptose. ADP-L-glycero-beta-D-manno-heptose (also called ADP-L-beta-D-heptose or ADP-L-glycero-D-manno-heptose) is a nucleotide-sugar precursor of the inner core lipopolysaccharide (LPS) from D-glycero-beta-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:yaf","PMID:11751812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"ADP-L-glycero-beta-D-manno-heptose metabolic process","termid":"GO:0097170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ADP-L-glycero-beta-D-manno-heptose biosynthetic process","synonyms":[{"name":"ADP-L-glycero-beta-D-manno-heptose anabolism","type":"exact"},{"name":"ADP-L-glycero-beta-D-manno-heptose biosynthesis","type":"exact"},{"name":"ADP-L-glycero-beta-D-manno-heptose formation","type":"exact"},{"name":"ADP-L-glycero-beta-D-manno-heptose synthesis","type":"exact"}],"termid":"GO:0097171"}


id: MONDO:0019767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hamel cerebro-palato-cardiac syndrome is an X-linked intellectual disability syndrome (XLMR) characterized by intellectual deficiency, microcephaly and short stature. It belongs to the group of disorders collectively referred to as Renpenning syndrome.","definition_xrefs":["Orphanet:93946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Renpenning syndrome","termid":"MONDO:0010653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hamel cerebro-palato-cardiac syndrome","secondary_identifiers":["icd11.foundation:1903143844","GARD:19240","UMLS:C5681615","MEDGEN:1842506"],"termid":"MONDO:0019767","xrefs":{"Monarch":{"xref_id":"0019767"}}}


id: PBO:0041358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4BPA pseudogene 1","termid":"PBO:0041358"}


id: GO:0010982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of high-density lipoprotein particle clearance. High-density lipoprotein particle clearance is the process in which a high-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"regulates","term_name":"high-density lipoprotein particle clearance","termid":"GO:0034384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of high-density lipoprotein particle clearance","termid":"GO:0010982"}


id: PBO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 heme lyase (predicted)","termid":"PBO:0001850"}


id: GO:0050802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The part of the circadian sleep/wake cycle where the organism is asleep.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian sleep/wake cycle process","termid":"GO:0022410"},{"relation_name":"is_a","term_name":"sleep","termid":"GO:0030431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}


id: PBO:0049722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 6","termid":"PBO:0049722"}


id: PBO:0054070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1418","termid":"PBO:0054070"}


id: GO:0061680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The Entner-Doudoroff pathway that proceeds through a D-gluconate intermediate and yields pyruvate and D-glyceraldehyde.","definition_xrefs":["MetaCyc:NPGLUCAT-PWY","PMID:12921536","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-phosphorylated glucose catabolic process","termid":"GO:0019595"},{"relation_name":"is_a","term_name":"Entner-Doudoroff pathway through gluconate","termid":"GO:0061679"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"Entner-Doudoroff pathway through gluconate to D-glyceraldehyde","termid":"GO:0061680"}


id: PBO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal signal sequence","termid":"PBO:0000065"}


id: GO:0052151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal execution of host apoptosis, leading to an increase in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:29571981","PMID:11805081","PMID:18037263","PMID:19801898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated killing of host cell","termid":"GO:0001907"},{"relation_name":"is_a","term_name":"symbiont-mediated activation of host programmed cell death","termid":"GO:0052042"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host apoptosis","termid":"GO:0052150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host apoptosis","secondary_identifiers":["GO:0033669","GO:0052030","GO:0039651","GO:0060139"],"synonyms":[{"name":"activation by organism of host apoptosis","type":"exact"},{"name":"activation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"activation by symbiont of host apoptosis","type":"narrow"},{"name":"induction by organism of host apoptotic programmed cell death","type":"exact"},{"name":"induction by symbiont of host apoptosis","type":"exact"},{"name":"positive regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"positive regulation by symbiont of host apoptosis","type":"narrow"},{"name":"positive regulation by symbiont of host apoptotic process","type":"exact"},{"name":"positive regulation by virus of host apoptosis","type":"narrow"},{"name":"stimulation by symbiont of host apoptosis","type":"narrow"},{"name":"up regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"up regulation by symbiont of host apoptosis","type":"exact"},{"name":"up-regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"up-regulation by symbiont of host apoptosis","type":"exact"},{"name":"upregulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"upregulation by symbiont of host apoptosis","type":"exact"}],"termid":"GO:0052151"}


id: MOD:00258
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-threonine residue by a thioether bond to form S-(2-aminovinyl)-3-methyl-D-cysteine.","definition_xrefs":["PubMed:9119018","RESID:AA0253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(2-aminovinyl)-3-methyl-D-cysteine","synonyms":[{"name":"(2S,3S)-2-amino-3-[((Z)-2-aminoethenyl)sulfanyl]butanoic acid","type":"exact"},{"name":"2-amino-3-[(2-aminovinyl)sulfanyl]butanoic acid","type":"exact"},{"name":"CROSSLNK S-(2-aminovinyl)-3-methyl-D-cysteine (Thr-Cys)","type":"exact"},{"name":"S-(2-aminovinyl)-3-methyl-D-cysteine","type":"exact"},{"name":"decarboxylated methyllanthionine","type":"exact"}],"termid":"MOD:00258"}


id: PBO:0091391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human HAPSTR1 ortholog, stress response protein","termid":"PBO:0091391"}


id: PBO:0068859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 99, pseudogene","termid":"PBO:0068859"}


id: PBO:0113273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that regulates growth in response to nutrients and TORC2, a complex that regulates plasma membrane (PM) homeostasis and cell-cycle dependent polarization of the actin cytoskeleton; involved in meiosis; PM retention is dependent on Avo3p; malonyl-CoA is a direct ATP-competitive inhibitor of TORC1; TOR2 has a paralog, TOR1, that arose from the whole genome duplication","termid":"PBO:0113273"}


id: MONDO:0006607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the sebaceous gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sebaceous gland disorder","secondary_identifiers":["ICD9:706.1","MESH:D012625","EFO:1000763","DOID:9098","MEDGEN:48599","SCTID:3441005","UMLS:C0036502"],"synonyms":[{"name":"disease of sebaceous gland","type":"exact"},{"name":"disease of sebaceous glands","type":"related"},{"name":"disease or disorder of sebaceous gland","type":"exact"},{"name":"disorder of sebaceous gland","type":"exact"},{"name":"sebaceous gland disease","type":"exact"},{"name":"sebaceous gland disease or disorder","type":"exact"}],"termid":"MONDO:0006607","xrefs":{"Monarch":{"xref_id":"0006607"}}}


id: GO:0099024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An infolding of the plasma membrane.","definition_xrefs":["GOC:vw","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane invagination","termid":"GO:0010324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane invagination","termid":"GO:0099024"}


id: MONDO:0031028
data:
  {"annotated_genes":["SJAG_00567","SJAG_03278","SJAG_03634"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88662,88663,88664],"is_not":false,"summary":null,"term":"MONDO:0031028"}]},"cv_name":"mondo","definition":"A developmental and epileptic encephalopathy characterized by onset of seizures and pituitary insufficiency in the first weeks or months of life with profoundly impaired development that has material basis in homozygous or compound heterozygous mutation in the HID1 gene on chromosome 17q25.","definition_xrefs":["DOID:0070391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00567":null,"SJAG_03278":null,"SJAG_03634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 105 with hypopituitarism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823963","OMIM:619983","UMLS:C5774190"],"synonyms":[{"name":"DEE105","type":"exact"},{"name":"developmental and epileptic encephalopathy 105 with hypopituitarism","type":"exact"}],"termid":"MONDO:0031028","terms_by_termid":{"MONDO:0031028":null},"xrefs":{"Monarch":{"xref_id":"0031028"}}}


id: MONDO:0005998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infestation with mites of the genus Trombiculidae, whose larvae carry the rickettsial agent of scrub typhus.","definition_xrefs":["MESH:D014323-modified"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mite infestation","termid":"MONDO:0004389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trombiculiasis","secondary_identifiers":["UMLS:C0041170","MEDGEN:11928","MESH:D014323","DOID:8399"],"synonyms":[{"name":"Trombiculidae caused disease or disorder","type":"exact"},{"name":"Trombiculidae disease or disorder","type":"exact"},{"name":"Trombiculidae infectious disease","type":"exact"}],"termid":"MONDO:0005998","xrefs":{"Monarch":{"xref_id":"0005998"}}}


id: MONDO:0006067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive morphologic variant of acinar adenocarcinoma of the prostate gland characterized by the presence of lakes of extracellular mucin. This diagnosis applies when at least 25% of the resected tumor contains extracellular mucin.","definition_xrefs":["NCIT:C5537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostatic acinar adenocarcinoma","termid":"MONDO:0002493"},{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"acinar prostate mucinous adenocarcinoma","secondary_identifiers":["MEDGEN:277536","DOID:3703","EFO:1000065","UMLS:C1335513"],"synonyms":[{"name":"acinar colloid prostate adenocarcinoma","type":"exact"},{"name":"colloid adenocarcinoma of prostate","type":"exact"},{"name":"colloid adenocarcinoma of the prostate","type":"exact"},{"name":"colloidal adenocarcinoma of prostate","type":"exact"},{"name":"colloidal adenocarcinoma of the prostate","type":"exact"},{"name":"colloidal prostate adenocarcinoma","type":"exact"},{"name":"mucinous adenocarcinoma of prostate","type":"exact"},{"name":"mucinous adenocarcinoma of the prostate","type":"exact"},{"name":"prostate colloid adenocarcinoma","type":"exact"}],"termid":"MONDO:0006067","xrefs":{"Monarch":{"xref_id":"0006067"}}}


id: PBO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (predicted)","termid":"PBO:0001076"}


id: MONDO:0008449
data:
  {"annotated_genes":["SJAG_04156","SJAG_04459","SJAG_01466","SJAG_00106","SJAG_03712","SJAG_04425","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89163,89168,89166,89169,89164,89167,89165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011120"}]},"cv_name":"mondo","definition":"A congenital neural tube defect in which vertebrae are not fully formed. It results in the protrusion of the spinal cord through the opening of the vertebrae.","definition_xrefs":["NCIT:C101214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"spinal cord disorder","termid":"MONDO:0002545"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01466":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04156":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"spina bifida","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:2036217905","DOID:0080016","EFO:0003105","SCTID:67531005","HP:0002414","MEDGEN:38283","ICD9:741","MESH:D016135","UMLS:C0080178"],"synonyms":[{"name":"NTD","type":"related"},{"name":"neural tube defects, susceptibility to","type":"related"},{"name":"rachischisis","type":"exact"},{"name":"spina bifida","type":"exact"},{"name":"spina bifida (disease)","type":"exact"},{"name":"spinal meningocele","type":"exact"},{"name":"spinal myelocele","type":"exact"},{"name":"spinal myelomeningocele","type":"exact"}],"termid":"MONDO:0008449","terms_by_termid":{"MONDO:0011120":null},"xrefs":{"Monarch":{"xref_id":"0008449"}}}


id: GO:0033178
data:
  {"annotated_genes":["SJAG_01817","SJAG_00136","SJAG_01397","SJAG_01471","SJAG_00212","SJAG_04955","SJAG_01447","SJAG_04015"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100790,60998,98484,104568,72955,111822,89845,120737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting two-sector ATPase complex and catalyzes ATP hydrolysis or synthesis. The catalytic domain (F1, V1, or A1) comprises a hexameric catalytic core and a central stalk, and is peripherally associated with the membrane when the two-sector ATPase is assembled.","definition_xrefs":["PMID:10838056","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex, catalytic domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033178","terms_by_termid":{"GO:0000221":null}}


id: GO:0018002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal glutamic acid of proteins to form the derivate acetyl-glutamic acid.","definition_xrefs":["RESID:AA0044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-glutamic acid acetylation","termid":"GO:0018002"}


id: RO:0002527
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x does not overlaps the sequence of x if and only if there is no z such that x has a subsequence z and z is a subsequence of y.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does_not_overlap_sequence_of","termid":"RO:0002527"}


id: MONDO:0009319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pantothenate kinase-associated neurodegeneration (PKAN) is the most common type of neurodegeneration with brain iron accumulation (NBIA), a rare neurodegenerative disorder characterized by progressive extrapyramidal dysfunction (dystonia, rigidity, choreoathetosis), iron accumulation on the brain and axonal spheroids in the central nervous system.","definition_xrefs":["Orphanet:157850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroacanthocytosis","termid":"MONDO:0016987"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"pantothenate kinase-associated neurodegeneration","secondary_identifiers":["MEDGEN:6708","NANDO:2200886","DOID:3981","NCIT:C84988","OMIM:234200","GARD:6564","SCTID:2992000","UMLS:C0018523","MESH:D006211","NANDO:1200534","ICD9:333.0"],"synonyms":[{"name":"Hallervorden-Spatz disease","type":"exact"},{"name":"Hallervorden-Spatz syndrome","type":"exact"},{"name":"NBIA1","type":"exact"},{"name":"PKAN","type":"exact"},{"name":"Pkan neuroaxonal dystrophy, juvenile-onset","type":"related"},{"name":"brain iron accumulation type I syndrome","type":"broad"},{"name":"neuroaxonal dystrophy, late infantile","type":"related"},{"name":"neurodegeneration with brain iron accumulation 1","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 1","type":"exact"},{"name":"pantothenate kinase-associated neurodegeneration","type":"exact"},{"name":"pigmentary pallidal degeneration","type":"exact"}],"termid":"MONDO:0009319","xrefs":{"Monarch":{"xref_id":"0009319"}}}


id: PBO:0090077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic aspartate aminotransferase Caa1","termid":"PBO:0090077"}


id: FYPO:0000536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein secretion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport during vegetative growth","termid":"FYPO:0000540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein secretion during vegetative growth","synonyms":[{"name":"abnormal protein secretion during mitotic cell cycle","type":"related"},{"name":"protein secretion: abnormal","type":"related"}],"termid":"FYPO:0000536"}


id: MONDO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceptionally rare adenocarcinoma that arises from the rete ovarii.","definition_xrefs":["NCIT:C40017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"rete ovarii neoplasm","termid":"MONDO:0003192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rete ovarii adenocarcinoma","secondary_identifiers":["DOID:4894","UMLS:C3840223","MEDGEN:826068"],"synonyms":[{"name":"rete ovarii adenocarcinoma","type":"exact"}],"termid":"MONDO:0003191","xrefs":{"Monarch":{"xref_id":"0003191"}}}


id: MONDO:0018339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prion protein (PrP) systemic amyloidosis, previously known as chronic diarrhea with hereditary sensory and autonomic neuropathy is an extremely rare autosomal dominant disorder reported in three British families, a Japanese and an Italian family (about 16 cases in total). Onset is usually in the fourth decade of life and the course lasts about 20 years. Reported clinical manifestations include diarrhea, nausea, autonomic failure (areflexia, weakness), neurogenic bladder and urinary infections. The disorder is caused by truncation mutations of the prion protein gene PRNP (20p13) leading to deposition of prion protein amyloid.","definition_xrefs":["Orphanet:397606"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PrP systemic amyloidosis","secondary_identifiers":["UMLS:C4518776","GARD:21632","MEDGEN:1377371","SCTID:733422008"],"synonyms":[{"name":"chronic diarrhea with HSAN","type":"exact"},{"name":"chronic diarrhea with hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"chronic diarrhoea with HSAN","type":"exact"},{"name":"chronic diarrhoea with hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"prion protein systemic amyloidosis","type":"exact"}],"termid":"MONDO:0018339","xrefs":{"Monarch":{"xref_id":"0018339"}}}


id: GO:0071124
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha1-beta1 integrin complex bound to tyrosine-protein phosphatase non-receptor type 2.","definition_xrefs":["PMID:15592458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha1-beta1 integrin-tyrosine-protein phosphatase non-receptor type 2 complex","synonyms":[{"name":"ITGA1-ITGB1-PTPN2 complex","type":"narrow"}],"termid":"GO:0071124"}


id: PBO:0036194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_elongation_without_chromosome_separation","termid":"PBO:0036194"}


id: GO:0035569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The trimethylation of the N-terminal proline of proteins to form the derivative N,N,N-trimethylproline.","definition_xrefs":["PMID:20668449"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-proline trimethylation (obsolete GO:0035569)","synonyms":[{"name":"N-terminal peptidyl-proline trimethylation","type":"exact"}],"termid":"GO:0035569"}


id: PR:P40995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho guanine nucleotide exchange factor scd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.09","synonyms":[{"name":"Spom972h-scd1","type":"exact"}],"termid":"PR:P40995"}


id: PBO:0054692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2101","termid":"PBO:0054692"}


id: GO:0050640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + isopenicillin N + H2O = CoA + penicillin G + L-2-aminoadipate.","definition_xrefs":["RHEA:20720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isopenicillin-N N-acyltransferase activity","secondary_identifiers":["GO:0042319","GO:0045440","EC:2.3.1.164","MetaCyc:2.3.1.164-RXN"],"synonyms":[{"name":"acyl-CoA:isopenicillin N N-acyltransferase activity","type":"related"},{"name":"acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase activity","type":"related"},{"name":"acyl-coenzyme A:isopenicillin N acyltransferase activity","type":"related"},{"name":"isopenicillin N:acyl-CoA acyltransferase activity","type":"related"},{"name":"isopenicillin-N acyltransferase activity","type":"exact"}],"termid":"GO:0050640"}


id: GO:0032081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the rate of type II restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of type II site-specific deoxyribonuclease activity (obsolete GO:0032081)","synonyms":[{"name":"down regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type II restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type II restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type II restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032081"}


id: MONDO:0019198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sympathetic ophthalmia (SO) is a bilateral granulomatous anterior uveitis usually occurring within the three months following trauma or a surgical procedure involving one eye.","definition_xrefs":["Orphanet:79098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panuveitis","termid":"MONDO:0017255"},{"relation_name":"is_a","term_name":"non-infectious anterior uveitis","termid":"MONDO:0017634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"sympathetic ophthalmia","secondary_identifiers":["GARD:18939","MedDRA:10042742","MESH:D009879","EFO:1001205","UMLS:C0029077","icd11.foundation:1639718137","MEDGEN:45203","DOID:12029","SCTID:75315001","ICD9:360.11"],"synonyms":[{"name":"sympathetic ophthalmia","type":"exact"},{"name":"sympathetic uveitis","type":"exact"}],"termid":"MONDO:0019198","xrefs":{"Monarch":{"xref_id":"0019198"}}}


id: PBO:0029122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_increased","termid":"PBO:0029122"}


id: PATO:0001393
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing an integral multiple of the monoploid number, possibly excluding the sex-determining chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Euploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ploidy","termid":"PATO:0001374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"euploid","termid":"PATO:0001393"}


id: PBO:0062449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 116 pseudogene","termid":"PBO:0062449"}


id: MONDO:0004825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete encephalitis (obsolete MONDO:0004825)","termid":"MONDO:0004825","xrefs":{"Monarch":{"xref_id":"0004825"}}}


id: GO:1903013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22365144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to differentiation-inducing factor 1","synonyms":[{"name":"DIF-1","type":"related"},{"name":"response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one","type":"exact"},{"name":"response to DIF-1","type":"related"},{"name":"response to DIF1","type":"related"}],"termid":"GO:1903013"}


id: PBO:0053105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 4","termid":"PBO:0053105"}


id: SO:1000111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that changes the amino acid sequence of the peptide in such a way that it changes the 3D structure of the molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000111 sequence_variant_affecting_3D_structure_of_polypeptide (obsolete SO:1000111)","synonyms":[{"name":"mutation affecting 3D structure of polypeptide","type":"related"},{"name":"mutation causing partially characterised 3D structural change","type":"related"},{"name":"mutation causing uncharacterised 3D structural change","type":"related"},{"name":"sequence variant affecting 3D structure of polypeptide","type":"exact"},{"name":"sequence variant affecting 3D-structure of polypeptide","type":"exact"},{"name":"sequence variant causing partially characterised 3D structural change","type":"exact"},{"name":"sequence variant causing uncharacterised 3D structural change","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_3D_structural_change","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_3D_structural_change","type":"exact"}],"termid":"SO:1000111"}


id: PBO:0044015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 delta","termid":"PBO:0044015"}


id: PBO:0091817
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAD23","termid":"PBO:0091817"}


id: PBO:0071533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL34 pseudogene 36","termid":"PBO:0071533"}


id: PBO:0088771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"con-6 family conserved fungal protein","termid":"PBO:0088771"}


id: PBO:0069318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 576, pseudogene","termid":"PBO:0069318"}


id: MONDO:1012064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ancon dwarfism, non-human animal","termid":"MONDO:1011941"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ancon dwarfism, sheep","secondary_identifiers":["OMIA:000302-9940"],"termid":"MONDO:1012064","xrefs":{"Monarch":{"xref_id":"1012064"}}}


id: PBO:0082009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 7","termid":"PBO:0082009"}


id: PBO:0044533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystroglycan 1","termid":"PBO:0044533"}


id: PBO:0061841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoglycin","termid":"PBO:0061841"}


id: MONDO:0017977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development of gynecological interest (obsolete MONDO:0017977)","secondary_identifiers":["Orphanet:325632"],"synonyms":[{"name":"46,XY DSD of gynecological interest","type":"exact"}],"termid":"MONDO:0017977","xrefs":{"Monarch":{"xref_id":"0017977"}}}


id: PR:Q09683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A double-strand break repair protein MRE11A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00172","PANTHER:PTHR10139:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.07","secondary_identifiers":["UniProtKB:Q09683"],"synonyms":[{"name":"Spom972h-MRE11A","type":"exact"}],"termid":"PR:Q09683"}


id: GO:0060066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of an oviduct over time, from its formation to the mature structure. An oviduct is a tube through which an ova passes from the ovary to the uterus, or from the ovary to the outside of the organism.","definition_xrefs":["GOC:ebc","PMID:27875265","GOC:dph","PMID:22918811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oviduct development","synonyms":[{"name":"Mullerian tract development","type":"related"},{"name":"fallopian tube development","type":"narrow"}],"termid":"GO:0060066"}


id: GO:0002570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of heavy chain immunoglobulin genes. N regions are found at the V-D and D-J recombinational junctions.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"},{"relation_name":"part_of","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immunoglobulin genes by N region addition","synonyms":[{"name":"somatic diversification of antibody genes by N region addition","type":"exact"}],"termid":"GO:0002570"}


id: PBO:0112980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase; catalyzes last of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; Erg27 protein is mainly ER-localized in strains devoid of mtDNA (rho° cells); mutants are sterol auxotrophs; mutation is functionally complemented by human HSD17B7","termid":"PBO:0112980"}


id: PBO:0068802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 39, pseudogene","termid":"PBO:0068802"}


id: GO:0034578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: limonene + H2O = alpha-terpineol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete limonene 8-hydratase activity (obsolete GO:0034578)","termid":"GO:0034578"}


id: GO:0007389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:isa_complete","ISBN:0521436125","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification process","synonyms":[{"name":"pattern biosynthesis","type":"related"},{"name":"pattern formation","type":"related"}],"termid":"GO:0007389"}


id: MOD:01145
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to N-tau-(ADP-ribosyl)diphthamide.","definition_xrefs":["DeltaMass:0","ChEBI:82697"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine","termid":"MOD:00049"},{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-tau-(ADP-ribosyl)diphthamide","synonyms":[{"name":"MOD_RES ADP-ribosyldiphthamide","type":"exact"}],"termid":"MOD:01145"}


id: PBO:0085292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phenylpyruvate decarboxylase; catalyzes decarboxylation of phenylpyruvate to phenylacetaldehyde, which is the first specific step in the Ehrlich pathway; involved in protein N-terminal Met and Ala catabolism","termid":"PBO:0085292"}


id: FYPO:0006460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal in regions containing protein-coding genes during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at protein coding gene during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at protein coding gene during first meiotic nuclear division","type":"exact"},{"name":"increased histone H2A phosphorylation at protein-coding gene during meiosis I","type":"exact"}],"termid":"FYPO:0006460"}


id: PBO:0082451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2H2-type zinc finger protein required for ribosome assembly; shuttling factor which associates with pre-60S particles in the nucleus, accompanying them to the cytoplasm; cytoplasmic dissociation of Bud20p requires Drg1p; N-terminus harbors a nuclear localization signal (NLS) and a nuclear export signal (NES); cytoplasmic Bud20p is reimported by Kap123-dependent pathway; involved in bud-site selection; diploid mutants display a random budding pattern; similar to human ZNF593","termid":"PBO:0082451"}


id: PBO:0091064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase Mag2","termid":"PBO:0091064"}


id: GO:0046871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to N-acetylgalactosamine, 2-acetamido-2-deoxygalactopyranose, the n-acetyl derivative of galactosamine.","definition_xrefs":["GOC:ai","PMID:18384150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"N-acetylgalactosamine binding","synonyms":[{"name":"N-acetylgalactosamine lectin","type":"related"}],"termid":"GO:0046871"}


id: PBO:0003384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication fork protection complex subunit Swi1","termid":"PBO:0003384"}


id: FYPO:0003740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) occurs to a lower extent than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PomBase:mah","GO:0034080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"decreased CENP-A containing chromatin assembly","synonyms":[{"name":"decreased CENP-A containing nucleosome assembly","type":"related"},{"name":"decreased CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"decreased CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"decreased CENP-A deposition","type":"related"},{"name":"decreased CENP-A loading","type":"related"},{"name":"decreased CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"decreased DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"decreased centromere-specific histone exchange","type":"exact"},{"name":"decreased centromere-specific nucleosome assembly","type":"exact"},{"name":"decreased centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"reduced CENP-A containing nucleosome assembly","type":"exact"}],"termid":"FYPO:0003740"}


id: PBO:0033751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_intergenic_meiotic_recombination","termid":"PBO:0033751"}


id: PBO:0070776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 6","termid":"PBO:0070776"}


id: GO:0016102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diterpenoid compounds, terpenoids with four isoprene units.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"diterpenoid biosynthetic process","synonyms":[{"name":"diterpene biosynthesis","type":"narrow"},{"name":"diterpene biosynthetic process","type":"narrow"},{"name":"diterpenoid anabolism","type":"exact"},{"name":"diterpenoid biosynthesis","type":"exact"},{"name":"diterpenoid formation","type":"exact"},{"name":"diterpenoid synthesis","type":"exact"}],"termid":"GO:0016102"}


id: PR:O59725
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.05c gene.","definition_xrefs":["UniProtKB:O59725","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit mic60 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.05c","synonyms":[{"name":"Mitofilin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC3E7.05c","type":"exact"}],"termid":"PR:O59725"}


id: PBO:0043837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1B","termid":"PBO:0043837"}


id: PBO:0031506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_leptomycin_B","termid":"PBO:0031506"}


id: MONDO:0017416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Postpoliomyelitis syndrome (PPS) is a neurologic disorder characterized by the development of new neuromuscular symptoms such as progressive muscular weakness or abnormal muscle fatigability occurring in survivors of the acute paralytic form of poliomyelitis, 15-40 years after recovery from the disease, and that is unexplained by other medical causes. Other manifestations that can occur gradually include generalized fatigue, muscle atrophy, muscle and joint pain, intolerance to cold, and difficulties sleeping, swallowing or breathing.","definition_xrefs":["Orphanet:2942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poliomyelitis","termid":"MONDO:0017373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"postpoliomyelitis syndrome","secondary_identifiers":["DOID:4952","UMLS:C0080040","MEDGEN:36363","GARD:4454","NORD:1600","EFO:0007454","icd11.foundation:2018885243","MESH:D016262","SCTID:31097004"],"synonyms":[{"name":"Post Polio Syndrome","type":"exact"},{"name":"polio late effects","type":"related"},{"name":"post polio syndrome","type":"related"},{"name":"post-polio muscular atrophy","type":"related"},{"name":"post-polio sequelae","type":"related"},{"name":"post-poliomyelitic syndrome","type":"related"},{"name":"postpolio sequelae","type":"exact"},{"name":"postpolio syndrome","type":"exact"},{"name":"postpoliomyelitic syndrome","type":"exact"},{"name":"postpoliomyelitis sequelae","type":"exact"},{"name":"postpoliomyelitis syndrome","type":"exact"}],"termid":"MONDO:0017416","xrefs":{"Monarch":{"xref_id":"0017416"}}}


id: PBO:0084942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multidrug efflux pump of the major facilitator superfamily; required for resistance to aminotriazole and 4-nitroquinoline-N-oxide; ATR1 has a paralog, YMR279C, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0084942"}


id: PBO:0045110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylglycine dehydrogenase","termid":"PBO:0045110"}


id: GO:0034389
data:
  {"annotated_genes":["SJAG_01537","SJAG_04049","SJAG_04059","SJAG_02980","SJAG_01180","SJAG_03162","SJAG_03609"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90584,112947,114026,120891,96504,116163,62985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140042"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lipid particle.","definition_xrefs":["PMID:18093937","GOC:jl","GOC:dph","GOC:mah","PMID:18250201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01537":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid droplet organization","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-8964572"],"synonyms":[{"name":"adiposome organization","type":"exact"},{"name":"lipid body organization","type":"exact"},{"name":"lipid particle organisation","type":"exact"},{"name":"lipid particle organization","type":"exact"},{"name":"lipid particle organization and biogenesis","type":"broad"}],"termid":"GO:0034389","terms_by_termid":{"GO:0140042":null}}


id: GO:2000874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glyoxylate cycle.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"glyoxylate cycle","termid":"GO:0006097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glyoxylate cycle","synonyms":[{"name":"regulation of glyoxylate bypass","type":"exact"}],"termid":"GO:2000874"}


id: GO:0060072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 100 to 220 picoSiemens that opens in response to stimulus by concerted actions of internal calcium ions and membrane potential. Large conductance calcium-activated potassium channels are less sensitive to calcium than are small or intermediate conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["ISBN:0815340729","PMID:17115074","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"large conductance calcium-activated potassium channel activity","secondary_identifiers":["GO:0022895"],"synonyms":[{"name":"BK KCa channel activity","type":"exact"},{"name":"BK calcium-activated potassium channel activity","type":"exact"},{"name":"BK channel activity","type":"related"},{"name":"large conductance KCa channel activity","type":"exact"}],"termid":"GO:0060072"}


id: PBO:0034720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase (ERCC-3) subunit Ptr8","termid":"PBO:0034720"}


id: PBO:0005048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght6","termid":"PBO:0005048"}


id: PBO:0111526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 6","termid":"PBO:0111526"}


id: PBO:0074686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 66","termid":"PBO:0074686"}


id: PBO:0064199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta enriched 4","termid":"PBO:0064199"}


id: PBO:0003807
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.4.2","termid":"PBO:0003807"}


id: PBO:0078610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64","termid":"PBO:0078610"}


id: PR:Q9UUI2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small histone ubiquitination factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.12c","synonyms":[{"name":"Spom972h-shf1","type":"exact"}],"termid":"PR:Q9UUI2"}


id: GO:0052528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism increases the frequency, rate or extent of programmed cell death in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete upregulation by organism of symbiont programmed cell death (obsolete GO:0052528)","synonyms":[{"name":"enhancement of symbiont programmed cell death by organism","type":"exact"},{"name":"upregulation by organism of symbiont programmed cell death","type":"exact"}],"termid":"GO:0052528"}


id: PBO:0065298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 2","termid":"PBO:0065298"}


id: GO:1905960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)pentan-1-one stimulus.","definition_xrefs":["GOC:TermGenie","PMID:19684855","GO_REF:0000071","PMID:3355503","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to differentiation-inducing factor 2","synonyms":[{"name":"response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)pentan-1-one","type":"exact"},{"name":"response to DIF-2","type":"related"},{"name":"response to DIF2","type":"related"}],"termid":"GO:1905960"}


id: PBO:0040333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 8","termid":"PBO:0040333"}


id: PBO:0069027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 272, pseudogene","termid":"PBO:0069027"}


id: PBO:0079561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA like domain containing 2","termid":"PBO:0079561"}


id: PBO:0049509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 16","termid":"PBO:0049509"}


id: MONDO:0958328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Seckel syndrome 11","secondary_identifiers":["UMLS:C5935595","OMIM:620767","MEDGEN:1855399"],"termid":"MONDO:0958328","xrefs":{"Monarch":{"xref_id":"0958328"}}}


id: GO:0019806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R-H + 2 bromide + H2O2 = 2 R-Br + 2 H2O. Enzymes with this activity often accept other halide ions as substrates, including chloride and iodide.","definition_xrefs":["EC:1.11.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"haloperoxidase activity","termid":"GO:0140905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"bromide peroxidase activity","synonyms":[{"name":"bromoperoxidase activity","type":"exact"}],"termid":"GO:0019806"}


id: PR:P53694
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtn1 gene.","definition_xrefs":["UniProtKB:P53694","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31A8.01c","synonyms":[{"name":"Spom972h-rtn1","type":"exact"},{"name":"cell lysis protein cwl1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P53694"}


id: MOD:00062
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to N-acetyl-L-tyrosine.","definition_xrefs":["PubMed:14730666","PubMed:11999733","PubMed:475783","PubMed:15350136","PubMed:11857757","PubMed:12175151","PubMed:2506074","RESID:AA0053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-tyrosine","synonyms":[{"name":"(2S)-2-acetamido-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"2-acetylamino-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"AcTyr","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetyltyrosine","type":"exact"},{"name":"N-acetyl-L-tyrosine","type":"exact"},{"name":"N-acetylated L-tyrosine","type":"exact"},{"name":"N-acetyltyrosine","type":"exact"}],"termid":"MOD:00062"}


id: GO:0046384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-deoxyribose 1-phosphate metabolic process","secondary_identifiers":["GO:0046388"],"synonyms":[{"name":"2-deoxyribose 1-phosphate metabolism","type":"exact"},{"name":"deoxyribose 1-phosphate metabolic process","type":"exact"},{"name":"deoxyribose 1-phosphate metabolism","type":"exact"}],"termid":"GO:0046384"}


id: MONDO:0017506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Congenital absence/hypoplasia of thumb, unilateral is a rare developmental defect during embryogenesis characterized by the unilateral underdevelopment of the thumb, ranging from a slight decrease in thumb size to complete absence of the thumb.","definition_xrefs":["Orphanet:295110"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital absence/hypoplasia of thumb, unilateral (obsolete MONDO:0017506)","synonyms":[{"name":"thumb hypodactyly, unilateral","type":"exact"},{"name":"thumb oligodactyly, unilateral","type":"exact"}],"termid":"MONDO:0017506","xrefs":{"Monarch":{"xref_id":"0017506"}}}


id: PBO:0066584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOA intronic transcript 1","termid":"PBO:0066584"}


id: PBO:0004233
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypercalciuric nephrolithiasis","termid":"PBO:0004233"}


id: PBO:0066876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 176","termid":"PBO:0066876"}


id: PR:Q9P7P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hop1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7P2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific protein hop1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.02","synonyms":[{"name":"Spom972h-hop1","type":"exact"},{"name":"linear element-associated protein hop1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7P2"}


id: PBO:0114430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR550A3 host gene","termid":"PBO:0114430"}


id: GO:0050589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leucocyanidin + 2-oxoglutarate + O2 = cis- or trans-dihydroquercetin + succinate + CO2 + 2 H2O.","definition_xrefs":["EC:1.14.20.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"leucocyanidin oxygenase activity","secondary_identifiers":["MetaCyc:RXN-602","GO:0045432"],"synonyms":[{"name":"anthocyanidin synthase activity","type":"related"},{"name":"leucoanthocyanidin dioxygenase activity","type":"related"},{"name":"leucoanthocyanidin hydroxylase","type":"related"},{"name":"leucocyanidin,2-oxoglutarate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050589"}


id: PBO:0050678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 5","termid":"PBO:0050678"}


id: GO:0035081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process induced by hormones that directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of programmed cell death","termid":"GO:0012502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death by hormones","termid":"GO:0035081"}


id: PBO:0076788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-2,3-enoyl-CoA reductase pseudogene 2","termid":"PBO:0076788"}


id: PBO:0027691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad52_foci_during_vegetative_growth","termid":"PBO:0027691"}


id: PBO:0111811
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I subfamily","termid":"PBO:0111811"}


id: PBO:0074292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20 like kinase","termid":"PBO:0074292"}


id: CHEBI:3312
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium dichloride","termid":"CHEBI:3312"}


id: MONDO:0014996
data:
  {"annotated_genes":["SJAG_04704"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88824],"is_not":false,"summary":null,"term":"MONDO:0014996"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the ELP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04704":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 58","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934608","UMLS:C4310641","OMIM:617270","DOID:0081220","GARD:13361"],"synonyms":[{"name":"ELP2 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"ELP2-related disorder","type":"related"},{"name":"MRT58","type":"exact"},{"name":"autosomal recessive intellectual disability 58","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in ELP2","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 58","type":"exact"},{"name":"intellectual disability, autosomal recessive 58","type":"exact"},{"name":"intellectual disability, autosomal recessive type 58","type":"exact"},{"name":"mental retardation, autosomal recessive 58","type":"exact"},{"name":"mental retardation, autosomal recessive type 58","type":"exact"}],"termid":"MONDO:0014996","terms_by_termid":{"MONDO:0014996":null},"xrefs":{"Monarch":{"xref_id":"0014996"}}}


id: MONDO:0025013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of animals within the order primates. This term includes diseases of Haplorhini and Strepsirhini.","definition_xrefs":["MESH:D018419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-human primate disease","synonyms":[{"name":"Primate disease","type":"related"},{"name":"disease, Primate","type":"related"},{"name":"diseases, Primate","type":"related"}],"termid":"MONDO:0025013","xrefs":{"Monarch":{"xref_id":"0025013"}}}


id: MONDO:0013172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic syndrome with central nervous system malformations characterized by severe developmental delay, neonatal hypotonia, seizures, optic nerve hypoplasia and distinct central nervous system malformations including extensive bilateral polymicrogyria, dysplastic or absent corpus callosum and malformed brainstem with loss of demarcation of the pontomedullary junction.","definition_xrefs":["Orphanet:250972"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with a central nervous system malformation as major feature (obsolete MONDO:0015220)","termid":"MONDO:0015220"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic optic nerve hypoplasia (obsolete MONDO:0015310)","termid":"MONDO:0015310"},{"relation_name":"excluded_subClassOf","term_name":"obsolete cerebral malformation with epilepsy (obsolete MONDO:0015655)","termid":"MONDO:0015655"},{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymicrogyria with optic nerve hypoplasia","secondary_identifiers":["MEDGEN:442565","OMIM:613180","UMLS:C2750798","GARD:20687","MESH:C567715"],"synonyms":[{"name":"CDCBM8","type":"related"},{"name":"cortical dysplasia, Complex, with Other brain malformations 8","type":"related"},{"name":"cortical dysplasia, complex, with other brain malformations 8","type":"related"},{"name":"polymicrogyria with optic nerve hypoplasia","type":"exact"}],"termid":"MONDO:0013172","xrefs":{"Monarch":{"xref_id":"0013172"}}}


id: PBO:0043004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase, acidic pseudogene 2","termid":"PBO:0043004"}


id: GO:0010735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific set of genes as a result of a transcription factor interacting with a serum response element (SRE). A serum response element is a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.","definition_xrefs":["GOC:dph","GOC:tb","GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription via serum response element binding (obsolete GO:0010735)","termid":"GO:0010735"}


id: PBO:0091780
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Counteractor of CENP-A loading Protein","termid":"PBO:0091780"}


id: GO:1903168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of pyrroline-5-carboxylate reductase activity.","definition_xrefs":["PMID:23743200","GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pyrroline-5-carboxylate reductase activity (obsolete GO:1903168)","synonyms":[{"name":"activation of 1-pyrroline-5-carboxylate reductase activity","type":"narrow"},{"name":"activation of L-proline oxidase activity","type":"narrow"},{"name":"activation of L-proline-NAD(P)+ 5-oxidoreductase activity","type":"narrow"},{"name":"activation of L-proline:NAD(P)+ 5-oxidoreductase activity","type":"narrow"},{"name":"activation of NADPH-L-delta1-pyrroline carboxylic acid reductase activity","type":"narrow"},{"name":"activation of P5CR activity","type":"narrow"},{"name":"activation of pyrroline-5-carboxylate reductase activity","type":"narrow"},{"name":"positive regulation of 1-pyrroline-5-carboxylate reductase activity","type":"exact"},{"name":"positive regulation of L-proline oxidase activity","type":"exact"},{"name":"positive regulation of L-proline-NAD(P)+ 5-oxidoreductase activity","type":"exact"},{"name":"positive regulation of L-proline:NAD(P)+ 5-oxidoreductase activity","type":"exact"},{"name":"positive regulation of NADPH-L-delta1-pyrroline carboxylic acid reductase activity","type":"exact"},{"name":"positive regulation of P5CR activity","type":"exact"},{"name":"up regulation of 1-pyrroline-5-carboxylate reductase activity","type":"exact"},{"name":"up regulation of L-proline oxidase activity","type":"exact"},{"name":"up regulation of L-proline-NAD(P)+ 5-oxidoreductase activity","type":"exact"},{"name":"up regulation of L-proline:NAD(P)+ 5-oxidoreductase activity","type":"exact"},{"name":"up regulation of NADPH-L-delta1-pyrroline carboxylic acid reductase activity","type":"exact"},{"name":"up regulation of P5CR activity","type":"exact"},{"name":"up regulation of pyrroline-5-carboxylate reductase activity","type":"exact"},{"name":"up-regulation of 1-pyrroline-5-carboxylate reductase activity","type":"exact"},{"name":"up-regulation of L-proline oxidase activity","type":"exact"},{"name":"up-regulation of L-proline-NAD(P)+ 5-oxidoreductase activity","type":"exact"},{"name":"up-regulation of L-proline:NAD(P)+ 5-oxidoreductase activity","type":"exact"},{"name":"up-regulation of NADPH-L-delta1-pyrroline carboxylic acid reductase activity","type":"exact"},{"name":"up-regulation of P5CR activity","type":"exact"},{"name":"up-regulation of pyrroline-5-carboxylate reductase activity","type":"exact"},{"name":"upregulation of 1-pyrroline-5-carboxylate reductase activity","type":"exact"},{"name":"upregulation of L-proline oxidase activity","type":"exact"},{"name":"upregulation of L-proline-NAD(P)+ 5-oxidoreductase activity","type":"exact"},{"name":"upregulation of L-proline:NAD(P)+ 5-oxidoreductase activity","type":"exact"},{"name":"upregulation of NADPH-L-delta1-pyrroline carboxylic acid reductase activity","type":"exact"},{"name":"upregulation of P5CR activity","type":"exact"},{"name":"upregulation of pyrroline-5-carboxylate reductase activity","type":"exact"}],"termid":"GO:1903168"}


id: MONDO:0022605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete brachymetapody anodontia hypotrichosis albinoidism (obsolete MONDO:0022605)","termid":"MONDO:0022605","xrefs":{"Monarch":{"xref_id":"0022605"}}}


id: PBO:0048318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 29","termid":"PBO:0048318"}


id: GO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene receptor activity","termid":"GO:0004974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"leukotriene B4 receptor activity","synonyms":[{"name":"BLT receptor","type":"narrow"}],"termid":"GO:0001632"}


id: PBO:0076451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell activation RhoGTPase activating protein","termid":"PBO:0076451"}


id: GO:0106111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic cohesin ssDNA (lagging strand) loading.","definition_xrefs":["PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic cohesin ssDNA (lagging strand) loading (obsolete GO:0106111)","termid":"GO:0106111"}


id: GO:0036122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the bone morphogenetic protein (BMP) family.","definition_xrefs":["PMID:9660951","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"BMP binding","synonyms":[{"name":"bone morphogenetic protein binding","type":"exact"}],"termid":"GO:0036122"}


id: PBO:0027127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_middle_meiotic_gene_mRNA_during_vegetative_growth","termid":"PBO:0027127"}


id: PBO:0029531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_septum","termid":"PBO:0029531"}


id: MONDO:0010793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, chronic tubulointerstitial","secondary_identifiers":["MEDGEN:333200","UMLS:C1838875","MESH:C564016","OMIM:551200"],"synonyms":[{"name":"nephropathy, chronic tubulointerstitial","type":"exact"}],"termid":"MONDO:0010793","xrefs":{"Monarch":{"xref_id":"0010793"}}}


id: GO:0021808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process that results in the fluctuations in intracellular calcium that are responsible for the initiation of movement as a component of the process of cerebral cortex glial-mediated radial migration.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph","PMID:12626695","GO_REF:0000021","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic calcium signaling involved in initiation of cell movement in glial-mediated radial cell migration (obsolete GO:0021808)","synonyms":[{"name":"cytosolic calcium signalling involved in the initiation of cell movement in glial-mediated radial cell migration","type":"exact"}],"termid":"GO:0021808"}


id: FYPO:0002574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to centromere","termid":"FYPO:0007853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to centromere during vegetative growth","synonyms":[{"name":"normal protein localisation to centromere during vegetative growth","type":"exact"},{"name":"normal protein localisation to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"normal protein localization to centromere during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromosome, centric region during vegetative growth","type":"exact"},{"name":"normal protein localization to chromosome, centromeric region during vegetative growth","type":"exact"}],"termid":"FYPO:0002574"}


id: GO:0030254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are transferred into the extracellular milieu or directly into host cells by the bacterial type III secretion system; secretion occurs in a continuous process without the distinct presence of periplasmic intermediates and does not involve proteolytic processing of secreted proteins.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein secretion by the type III secretion system","synonyms":[{"name":"protein secretion by the T3S","type":"exact"},{"name":"protein secretion by the T3SS","type":"exact"},{"name":"protein secretion by the TTSS","type":"exact"},{"name":"protein secretion by the type III protein secretion system","type":"exact"},{"name":"type III protein secretion system","type":"exact"}],"termid":"GO:0030254"}


id: PBO:0077774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM40 pseudogene 1","termid":"PBO:0077774"}


id: MONDO:0012851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis/osteoporosis, hypophosphatemic","termid":"MONDO:0000079"},{"relation_name":"is_a","term_name":"impaired renal function disease","termid":"MONDO:0001343"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005497"],"is_obsolete":false,"name":"hypophosphatemic nephrolithiasis/osteoporosis 2","secondary_identifiers":["MESH:C567362","MEDGEN:394127","DOID:0080078","GARD:18347","OMIM:612287","UMLS:C2676782"],"synonyms":[{"name":"NPHLOP2","type":"related"},{"name":"hypophosphatemic nephrolithiasis/osteoporosis type 2","type":"exact"},{"name":"nephrolithiasis/osteoporosis, hypophosphatemic, 2","type":"related"},{"name":"nephrolithiasis/osteoporosis, hypophosphatemic, type 2","type":"exact"}],"termid":"MONDO:0012851","xrefs":{"Monarch":{"xref_id":"0012851"}}}


id: PBO:0051125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-3 (pseudogene)","termid":"PBO:0051125"}


id: GO:2001214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vasculogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of vasculogenesis","termid":"GO:2001212"},{"relation_name":"positively_regulates","term_name":"vasculogenesis","termid":"GO:0001570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vasculogenesis","synonyms":[{"name":"positive regulation of vascular morphogenesis","type":"exact"}],"termid":"GO:2001214"}


id: MONDO:0017413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"Reunion island Larsen syndrome","secondary_identifiers":["Orphanet:294049"],"synonyms":[{"name":"RLS","type":"exact"},{"name":"multiple joint dislocations-short stature-hyperlaxity-craniofacial dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0017413","xrefs":{"Monarch":{"xref_id":"0017413"}}}


id: PBO:0034707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Tgs1","termid":"PBO:0034707"}


id: PBO:0024479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation inhibitor (predicted)","termid":"PBO:0024479"}


id: GO:0071016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the recruitment of the preassembled U4atac/U6atac.U5 tri-snRNP to the U12-type prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the U11, U12 and U4atac/U6atac.U5 snRNPs.","definition_xrefs":["GOC:mah","PMID:16201866","GOC:krc","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U12-type spliceosomal complex","termid":"GO:0005689"},{"relation_name":"is_a","term_name":"precatalytic spliceosome","termid":"GO:0071011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U12-type precatalytic spliceosome","synonyms":[{"name":"AT-AC precatalytic spliceosome","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex B","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex B1","type":"narrow"},{"name":"minor precatalytic spliceosome","type":"exact"},{"name":"yeast U12-type spliceosomal complex A2-1","type":"narrow"}],"termid":"GO:0071016"}


id: PBO:0082695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the kinetochore-associated Ndc80 complex; conserved coiled-coil protein involved in chromosome segregation, spindle checkpoint activity, and kinetochore assembly and clustering; evolutionarily conserved; complex members include Ndc80p, Nuf2p, Scp24p, and Spc25p; modified by sumoylation","termid":"PBO:0082695"}


id: GO:0050319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tartrate + H+ = D-glycerate + CO2.","definition_xrefs":["EC:4.1.1.73","RHEA:13317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"tartrate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R01751","MetaCyc:TARTRATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"(R,R)-tartrate carboxy-lyase (D-glycerate-forming)","type":"related"},{"name":"(R,R)-tartrate carboxy-lyase activity","type":"related"}],"termid":"GO:0050319"}


id: PBO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_substance","termid":"PBO:0006180"}


id: PBO:0003652
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Random Septum Postioning","termid":"PBO:0003652"}


id: GO:0015306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sialate(out) + cation(out) = sialate(in) + cation(in).","definition_xrefs":["TC:2.A.1.14.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sialate:monoatomic cation symporter activity","synonyms":[{"name":"cation/sialate symporter activity","type":"exact"},{"name":"cation:sialate symporter activity","type":"exact"},{"name":"sialate transporter activity","type":"broad"},{"name":"sialate/cation symporter activity","type":"exact"},{"name":"sialate:cation symporter activity","type":"broad"}],"termid":"GO:0015306"}


id: PBO:0047127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM169A antisense RNA 1","termid":"PBO:0047127"}


id: PBO:0091526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly lipid binding protein Mug56","termid":"PBO:0091526"}


id: PBO:0077004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 6","termid":"PBO:0077004"}


id: MONDO:0021484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the maxillary sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"maxillary sinus neoplasm","termid":"MONDO:0006850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of maxillary sinus","secondary_identifiers":["ICD9:212.0","icd11.foundation:1738455612","NCIT:C4414","SCTID:92211008","MEDGEN:138024","UMLS:C0345666"],"synonyms":[{"name":"benign maxillary antrum neoplasm","type":"exact"},{"name":"benign maxillary antrum tumor","type":"exact"},{"name":"benign maxillary antrum tumour","type":"exact"},{"name":"benign maxillary sinus neoplasm","type":"exact"},{"name":"benign maxillary sinus tumor","type":"exact"},{"name":"benign maxillary sinus tumour","type":"exact"},{"name":"benign maxillofacial sinus neoplasm","type":"exact"},{"name":"benign maxillofacial sinus tumor","type":"exact"},{"name":"benign maxillofacial sinus tumour","type":"exact"},{"name":"benign neoplasm of maxillary antrum","type":"exact"},{"name":"benign neoplasm of maxillofacial sinus","type":"exact"},{"name":"benign neoplasm of the maxillary antrum","type":"exact"},{"name":"benign neoplasm of the maxillary sinus","type":"exact"},{"name":"benign neoplasm of the maxillofacial sinus","type":"exact"},{"name":"benign tumor of maxillary antrum","type":"exact"},{"name":"benign tumor of maxillary sinus","type":"exact"},{"name":"benign tumor of maxillofacial sinus","type":"exact"},{"name":"benign tumor of the maxillary antrum","type":"exact"},{"name":"benign tumor of the maxillary sinus","type":"exact"},{"name":"benign tumor of the maxillofacial sinus","type":"exact"},{"name":"benign tumour of maxillary antrum","type":"exact"},{"name":"benign tumour of maxillary sinus","type":"exact"},{"name":"benign tumour of maxillofacial sinus","type":"exact"},{"name":"benign tumour of the maxillary antrum","type":"exact"},{"name":"benign tumour of the maxillary sinus","type":"exact"},{"name":"benign tumour of the maxillofacial sinus","type":"exact"},{"name":"maxillary sinus benign neoplasm","type":"exact"}],"termid":"MONDO:0021484","xrefs":{"Monarch":{"xref_id":"0021484"}}}


id: PR:O94666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02787","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.08c","secondary_identifiers":["UniProtKB:O94666"],"synonyms":[{"name":"DNA-directed RNA polymerase III largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC158 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3A","type":"exact"}],"termid":"PR:O94666"}


id: FYPO:0007220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in regions containing protein-coding genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:31260531","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"normal histone H3K9 acetylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007220"}


id: GO:0051591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cAMP","synonyms":[{"name":"response to 3',5' cAMP","type":"exact"},{"name":"response to 3',5'-cAMP","type":"exact"},{"name":"response to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"response to cyclic AMP","type":"exact"}],"termid":"GO:0051591"}


id: MONDO:0044327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant disease characterized by adult-onset of liver cysts arising from the bile duct epithelium, caused by heterozygous mutation in the LRP5 gene. Some patients may develop a few kidney cysts, but these are often incidental and do not result in renal failure.","definition_xrefs":["OMIM:617875","PMID:24706814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic liver disease","termid":"MONDO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"polycystic liver disease 4 with or without kidney cysts","secondary_identifiers":["MEDGEN:1644991","UMLS:C4693479","DOID:0060977"],"synonyms":[{"name":"PCLD4","type":"related"},{"name":"polycystic liver disease 4 with or without kidney cysts","type":"exact"}],"termid":"MONDO:0044327","xrefs":{"Monarch":{"xref_id":"0044327"}}}


id: PBO:0090943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type zinc finger protein, Prp19 complex subunit, RNA-binding Cwf2","termid":"PBO:0090943"}


id: MONDO:0008356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial heads, posterior dislocation of","secondary_identifiers":["MEDGEN:357272","UMLS:C1867398","MESH:C566728","OMIM:179200"],"synonyms":[{"name":"radial heads, posterior dislocation of","type":"exact"}],"termid":"MONDO:0008356","xrefs":{"Monarch":{"xref_id":"0008356"}}}


id: GO:0060906
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110430],"is_not":false,"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of non-coding RNA-mediated heterochromatin formation.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0010964"},{"relation_name":"is_a","term_name":"negative regulation of heterochromatin formation","termid":"GO:0031452"},{"relation_name":"is_a","term_name":"negative regulation of gene silencing by regulatory ncRNA","termid":"GO:0060967"},{"relation_name":"negatively_regulates","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of regulatory ncRNA-mediated heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of RNAi-mediated heterochromatin assembly","type":"exact"},{"name":"negative regulation of chromatin silencing by small RNA","type":"related"},{"name":"negative regulation of heterochromatin assembly by small RNA","type":"narrow"},{"name":"negative regulation of ncRNA-mediated heterochromatin formation","type":"exact"},{"name":"negative regulation of small non-coding RNA-mediated heterochromatin formation","type":"narrow"}],"termid":"GO:0060906","terms_by_termid":{"GO:0060906":null}}


id: GO:1900768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fonsecin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"fonsecin metabolic process","termid":"GO:1900767"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone catabolic process","termid":"GO:1900786"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"fonsecin catabolic process","synonyms":[{"name":"fonsecin breakdown","type":"exact"},{"name":"fonsecin catabolism","type":"exact"},{"name":"fonsecin degradation","type":"exact"}],"termid":"GO:1900768"}


id: GO:0047403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + beta-D-Gal-(1,3)-beta-D-GlcNAc-(1,3)-beta-D-Gal-(1,4)-D-Glc = beta-D-Gal-(1,4)-D-Glc + beta-D-Gal-(1,3)-D-GlcNAc.","definition_xrefs":["EC:3.2.1.140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"lacto-N-biosidase activity","secondary_identifiers":["MetaCyc:RXN-8731","RHEA:21568"],"synonyms":[{"name":"oligosaccharide lacto-N-biosylhydrolase activity","type":"related"}],"termid":"GO:0047403"}


id: PBO:0054755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2166","termid":"PBO:0054755"}


id: PBO:0046368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 4","termid":"PBO:0046368"}


id: PR:O74518
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid12 gene.","definition_xrefs":["UniProtKB:O74518","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) RNA polymerase cid12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.12","synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cid12","type":"exact"},{"name":"caffeine-induced death protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide adenylyltransferase cid12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74518"}


id: PBO:0027520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_phase","termid":"PBO:0027520"}


id: GO:2000131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tyramine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of octopamine or tyramine signaling pathway","termid":"GO:2000125"},{"relation_name":"regulates","term_name":"tyramine signaling pathway","termid":"GO:0071928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of tyramine signaling pathway","synonyms":[{"name":"regulation of tyramine signalling pathway","type":"exact"}],"termid":"GO:2000131"}


id: GO:0010392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactoglucomannan, a polysaccharide composed of D-glucose, D-galactose and D-mannose. The mannose units form the backbone structure (a linear main chain) decorated with a mixture of D-glucose and D-galactose side-units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substituted mannan metabolic process","termid":"GO:0006080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galactoglucomannan metabolic process","synonyms":[{"name":"galactoglucomannan metabolism","type":"related"}],"termid":"GO:0010392"}


id: MONDO:0020057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uniparental disomy of paternal origin (obsolete MONDO:0020057)","secondary_identifiers":["SCTID:726402006","Orphanet:98154","icd11.foundation:2028476598"],"termid":"MONDO:0020057","xrefs":{"Monarch":{"xref_id":"0020057"}}}


id: FYPO:0007644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal in subtelomeric regions occurs during G0 phase.","definition_xrefs":["PMID:27738016","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during G0","termid":"FYPO:0007641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at subtelomeric heterochromatin during G0","synonyms":[{"name":"decreased histone H3 K9 dimethylation at subtelomeric heterochromatin during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at subtelomere during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at subtelomeric heterochromatin during cell quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at subtelomeric heterochromatin during quiescence","type":"related"},{"name":"decreased histone H3K9 dimethylation at subtelomeric heterochromatin during G0","type":"exact"},{"name":"decreased histone H3K9me2 dimethylation at subtelomeric heterochromatin during G0","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at subtelomeric heterochromatin during G0","type":"exact"}],"termid":"FYPO:0007644"}


id: GO:0002839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to tumor cell","termid":"GO:0002836"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"immune response to tumor cell","termid":"GO:0002418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune response to tumor cell","synonyms":[{"name":"activation of immune response to tumor cell","type":"narrow"},{"name":"positive regulation of immune response to tumour cell","type":"exact"},{"name":"stimulation of immune response to tumor cell","type":"narrow"},{"name":"up regulation of immune response to tumor cell","type":"exact"},{"name":"up-regulation of immune response to tumor cell","type":"exact"},{"name":"upregulation of immune response to tumor cell","type":"exact"}],"termid":"GO:0002839"}


id: MONDO:0016195
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87697,87696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[87076,87077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008050"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of beta-myosin heavy chain (MYH7)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20434","Orphanet:209185","UMLS:C5680832","MEDGEN:1842636"],"termid":"MONDO:0016195","terms_by_termid":{"MONDO:0008050":null,"MONDO:0008409":null},"xrefs":{"Monarch":{"xref_id":"0016195"}}}


id: MONDO:0011565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal obesity-metabolic syndrome","termid":"MONDO:0000816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"metabolic syndrome X","secondary_identifiers":["MESH:D024821","OMIM:605552","SCTID:237602007","DOID:14221","UMLS:C4552048","ICD9:277.7","MEDGEN:1640883"],"synonyms":[{"name":"AOMS1","type":"related"},{"name":"abdominal obesity metabolic syndrome","type":"related"},{"name":"abdominal obesity-metabolic syndrome 1","type":"exact"},{"name":"abdominal obesity-metabolic syndrome quantitative trait locus 1","type":"related"},{"name":"dysmetabolic syndrome X","type":"exact"},{"name":"metabolic syndrome 10","type":"related"},{"name":"metabolic syndrome type X","type":"exact"},{"name":"metabolic syndrome, protection against","type":"related"}],"termid":"MONDO:0011565","xrefs":{"Monarch":{"xref_id":"0011565"}}}


id: MONDO:0022949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"defective apolipoprotein b-100","secondary_identifiers":["GARD:1720"],"termid":"MONDO:0022949","xrefs":{"Monarch":{"xref_id":"0022949"}}}


id: PBO:0026760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_cellular_response_to_UV","termid":"PBO:0026760"}


id: MONDO:0004627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute or chronic inflammation of the duodenum. Causes include bacterial and viral infections and gastroesophageal reflux disease. Symptoms include vomiting and abdominal pain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenal disorder","termid":"MONDO:0002866"},{"relation_name":"is_a","term_name":"enteritis","termid":"MONDO:0043579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenitis","secondary_identifiers":["icd11.foundation:1595026136","MEDGEN:4419","DOID:8643","MESH:D004382","UMLS:C0013298","ICD10CM:K29.8","ICD9:535.60","NCIT:C94409","SCTID:72007001","ICD9:535.6"],"synonyms":[{"name":"duodenitis","type":"exact"},{"name":"duodenum inflammation","type":"exact"},{"name":"hemorrhagic duodenitis","type":"narrow"},{"name":"inflammation of duodenum","type":"exact"}],"termid":"MONDO:0004627","xrefs":{"Monarch":{"xref_id":"0004627"}}}


id: GO:0034066
data:
  {"annotated_genes":["SJAG_00143","SJAG_06588"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77560,79038],"is_not":false,"summary":null,"term":"GO:0034066"}]},"cv_name":"cellular_component","definition":"A protein complex that acts as a nucleotide exchange factor for the GTPase Ypt6p, and is required for fusion of endosome-derived vesicles with the Golgi.","definition_xrefs":["GOC:mah","GOC:jh","PMID:10990452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl-nucleotide exchange factor complex","termid":"GO:0032045"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"Ric1-Rgp1 guanyl-nucleotide exchange factor complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Ric1p-Rgp1p complex","type":"related"}],"termid":"GO:0034066","terms_by_termid":{"GO:0034066":null}}


id: PBO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP synthase complex assembly protein Atp25 (predicted)","termid":"PBO:0000330"}


id: GO:0042908
data:
  {"annotated_genes":["SJAG_03079","SJAG_03808","SJAG_03817","SJAG_03951","SJAG_02344","SJAG_03363","SJAG_02152","SJAG_01145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57674,62335,70542,119462,120764],"is_not":false,"summary":null,"term":"GO:0042908"},{"annotations":[64753,119947,58746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"The directed movement of a xenobiotic into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:go_curators","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_02152":null,"SJAG_02344":null,"SJAG_03079":null,"SJAG_03363":null,"SJAG_03808":null,"SJAG_03817":null,"SJAG_03951":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"xenobiotic transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0015893"],"synonyms":[{"name":"drug transport","type":"related"}],"termid":"GO:0042908","terms_by_termid":{"GO:0042908":null,"GO:1990961":null}}


id: GO:0044497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which one organism increases the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["GOC:jl","PMID:19837656","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of blood pressure in another organism (obsolete GO:0044497)","synonyms":[{"name":"positive regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044497"}


id: MONDO:0016294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hirschsprung disease-type D brachydactyly syndrome is characterized by Hirschsprung disease and absence or hypoplasia of the nails and distal phalanges of the thumbs and great toes (type D brachydactyly). It has been described in four males from one family (two brothers and two maternal uncles). Transmission appears to be X-linked recessive but autosomal dominant inheritance with incomplete penetrance in females can not be ruled out.","definition_xrefs":["Orphanet:2150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Hirschsprung disease-type D brachydactyly syndrome","secondary_identifiers":["MEDGEN:375339","UMLS:C1844017","MESH:C538319","GARD:2700","OMIM:306980"],"synonyms":[{"name":"Hirschsprung disease type d brachydactyly","type":"related"},{"name":"Hirschsprung disease with type D brachydactyly","type":"related"},{"name":"Hirschsprung disease with type d brachydactyly","type":"exact"},{"name":"familial Hirschsprung's disease and type D brachydactyly","type":"related"}],"termid":"MONDO:0016294","xrefs":{"Monarch":{"xref_id":"0016294"}}}


id: FYPO:0001868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of adenylyl cyclase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal adenylyl cyclase activity","termid":"FYPO:0001841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased adenylyl cyclase activity","synonyms":[{"name":"decreased adenylate cyclase activity","type":"exact"},{"name":"reduced adenylyl cyclase activity","type":"exact"}],"termid":"FYPO:0001868"}


id: PR:Q10155
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease Z 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.10","synonyms":[{"name":"RNase Z 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-trz1","type":"exact"},{"name":"tRNA 3 endonuclease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNase Z 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10155"}


id: RO:0001015
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between two independent continuants, the location and the target, in which the target is entirely within the location","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"location_of","termid":"RO:0001015"}


id: PBO:0089298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family, Adg2","termid":"PBO:0089298"}


id: MONDO:0100481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tuberculosis caused by primary infection of or reactivation of latent Mycobacterium tuberculosis. Active tuberculosis characterized by clinical manifestation and active symptoms compatible with tuberculosis, and is distinct from latent tuberculosis infection that occurs without signs or symptoms of active disease.","definition_xrefs":["PMID:30020618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active tuberculosis","secondary_identifiers":["MEDGEN:508753","UMLS:C0151332"],"synonyms":[{"name":"active TB","type":"exact"}],"termid":"MONDO:0100481","xrefs":{"Monarch":{"xref_id":"0100481"}}}


id: PR:O94731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs8501 gene.","definition_xrefs":["UniProtKB:O94731","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs85-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.19c","synonyms":[{"name":"Spom972h-trs8501","type":"exact"},{"name":"TRAPP subunit trs85-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94731"}


id: PBO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ataxia-ocular apraxia 2","termid":"PBO:0001975"}


id: GO:0032837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during a normally chiasmate meiosis under the condition that chiasma have not occurred between a particular pair of homologs. Distributive segregation is a backup mechanism to ensure the segregation of homologs that have failed to cross over - either as a consequence of mutation or not, as, for example, the 4th chromosome of Drosophila melanogaster (which never exchanges, presumably due to its small size) - but nevertheless segregate normally.","definition_xrefs":["GOC:ma","GOC:sart","GOC:expert_rsh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"distributive segregation","termid":"GO:0032837"}


id: GO:0034832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E)-geranial + H2O + NAD+ = geranate + 2 H+ + NADH.","definition_xrefs":["RHEA:34351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"geranial dehydrogenase activity","secondary_identifiers":["EC:1.2.1.86","MetaCyc:RXN-11970"],"termid":"GO:0034832"}


id: FYPO:0005052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs), as part of chromatin silencing by small RNA, is decreased.","definition_xrefs":["GO:0070919","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased production of siRNA involved in chromatin silencing by small RNA (obsolete FYPO:0005052)","synonyms":[{"name":"decreased chromatin silencing by small RNA, production of guide RNAs","type":"exact"},{"name":"decreased chromatin silencing by small RNA, production of siRNA","type":"exact"},{"name":"decreased production of guide RNAs involved in chromatin silencing by small RNA","type":"exact"},{"name":"decreased production of siRNA involved in chromatin silencing by small RNA during mitotic cell cycle","type":"related"},{"name":"decreased production of siRNA involved in chromatin silencing by small RNA during vegetative growth","type":"exact"},{"name":"reduced production of siRNA involved in chromatin silencing by small RNA","type":"exact"}],"termid":"FYPO:0005052"}


id: PBO:0063952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-5-phosphate 4-kinase type 2 alpha","termid":"PBO:0063952"}


id: GO:0007469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the antenna over time, from its formation to the mature structure. The antenna are the sensory structures on the head that are capable of detecting various environmental stimuli.","direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"part_of","term_name":"eye-antennal disc development","termid":"GO:0035214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal development","termid":"GO:0007469"}


id: GO:0042906
data:
  {"annotated_genes":["SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81733],"is_not":false,"summary":null,"term":"GO:0042906"}]},"cv_name":"biological_process","definition":"The directed movement of xanthine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xanthine (2,6-dihydroxypurine) is a purine formed in the metabolic breakdown of guanine, but is not present in nucleic acids.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transport","termid":"GO:0006863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"xanthine transport","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"xanthine transmembrane transport","type":"exact"}],"termid":"GO:0042906","terms_by_termid":{"GO:0042906":null}}


id: GO:0000455
data:
  {"annotated_genes":["SJAG_03572","SJAG_03755","SJAG_01172"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57286,77284,108153],"is_not":false,"summary":null,"term":"GO:0000455"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine during ribosome biogenesis where the enzyme specifies the site that becomes pseudouridylated without using a guide RNA.","definition_xrefs":["GOC:curators","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthesis","termid":"GO:0031118"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01172":null,"SJAG_03572":null,"SJAG_03755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"enzyme-directed rRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0000455","terms_by_termid":{"GO:0000455":null}}


id: MONDO:0011552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in an autosomal dominant mutation of SCZD10 on chromosome 15q15.","definition_xrefs":["DOID:0070086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 10","secondary_identifiers":["MEDGEN:107776","MESH:D012560","OMIM:605419","UMLS:C0543918"],"synonyms":[{"name":"SCZD10","type":"exact"},{"name":"catatonia, periodic","type":"related"},{"name":"schizophrenia 10","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 15Q15-related","type":"related"}],"termid":"MONDO:0011552","xrefs":{"Monarch":{"xref_id":"0011552"}}}


id: PBO:0086722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; weak similarity with uridine kinases and with phosphoribokinases","termid":"PBO:0086722"}


id: PBO:0051532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 3","termid":"PBO:0051532"}


id: MONDO:1012189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital neuromuscular disease, non-human animal","termid":"MONDO:1011851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital neuromuscular disease, sheep","secondary_identifiers":["OMIA:000718-9940"],"termid":"MONDO:1012189","xrefs":{"Monarch":{"xref_id":"1012189"}}}


id: PBO:0059141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 8","termid":"PBO:0059141"}


id: PBO:0040625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 4","termid":"PBO:0040625"}


id: PBO:0085257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein required for COPI vesicle fusion to the ER; mediates Sey1p-independent homotypic ER fusion; prohibits back-fusion of COPII vesicles with the ER; forms a tethering complex with Sec39p and Dsl1p that interacts with ER SNAREs Sec20p and Use1p","termid":"PBO:0085257"}


id: GO:0098708
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119202],"is_not":false,"summary":null,"term":"GO:0098708"}]},"cv_name":"biological_process","definition":"The directed movement of D-glucose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose import across plasma membrane","termid":"GO:0140271"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"D-glucose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990821","GO:0061490"],"synonyms":[{"name":"glucose import across plasma membrane","type":"exact"},{"name":"glucose import into cell","type":"exact"},{"name":"high affinity glucose import","type":"narrow"}],"termid":"GO:0098708","terms_by_termid":{"GO:0098708":null}}


id: PBO:0057193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 365b","termid":"PBO:0057193"}


id: GO:0000260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in vacuoles of eukaryotes and in bacteria.","definition_xrefs":["TC:3.A.2.2.1","TC:3.A.2.2.3"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating V-type ATPase activity (obsolete GO:0000260)","synonyms":[{"name":"hydrogen-translocating V-type ATPase activity","type":"exact"}],"termid":"GO:0000260"}


id: GO:0006397
data:
  {"annotated_genes":["SJAG_01452","SJAG_01327","SJAG_04117","SJAG_02558","SJAG_16453","SJAG_00527","SJAG_04589","SJAG_03430","SJAG_04880","SJAG_04488","SJAG_03983","SJAG_04318","SJAG_05240","SJAG_04377","SJAG_03427","SJAG_03687","SJAG_04587","SJAG_03233","SJAG_03245","SJAG_01819","SJAG_01843","SJAG_02844","SJAG_02772","SJAG_05212","SJAG_03210","SJAG_02317","SJAG_00992","SJAG_02686","SJAG_05231","SJAG_01761","SJAG_00058","SJAG_03369","SJAG_03966","SJAG_04782","SJAG_02455","SJAG_01408","SJAG_01064","SJAG_01852","SJAG_04071","SJAG_00639","SJAG_03279","SJAG_02915","SJAG_01308","SJAG_05025","SJAG_03594","SJAG_01791","SJAG_00911","SJAG_02275","SJAG_00818","SJAG_04202","SJAG_04863","SJAG_01152","SJAG_03624","SJAG_03126","SJAG_01301","SJAG_01634","SJAG_04433","SJAG_00597","SJAG_02560","SJAG_01169","SJAG_00206","SJAG_00797","SJAG_00539","SJAG_02865","SJAG_02185","SJAG_04694","SJAG_00322","SJAG_04025","SJAG_00504","SJAG_04230","SJAG_01175","SJAG_02722","SJAG_05926","SJAG_00474","SJAG_03853","SJAG_02905","SJAG_02687","SJAG_03890","SJAG_00531","SJAG_00448","SJAG_03226","SJAG_05235","SJAG_02018","SJAG_04914","SJAG_05224","SJAG_01015","SJAG_02037","SJAG_04898","SJAG_01214","SJAG_01599","SJAG_04911","SJAG_05208","SJAG_00809","SJAG_03038","SJAG_01217","SJAG_01040","SJAG_03410","SJAG_02227","SJAG_01547","SJAG_03894","SJAG_00147","SJAG_00313","SJAG_03547","SJAG_00446","SJAG_00996","SJAG_00077","SJAG_05349","SJAG_04214","SJAG_02862","SJAG_03238","SJAG_02058","SJAG_00998","SJAG_05211","SJAG_02083","SJAG_04405","SJAG_01557","SJAG_01144","SJAG_03112","SJAG_00083","SJAG_01919","SJAG_01799","SJAG_03070","SJAG_05195","SJAG_00278","SJAG_00435","SJAG_02396","SJAG_03323","SJAG_01958","SJAG_00363","SJAG_00094","SJAG_00989","SJAG_01200","SJAG_04942","SJAG_00859","SJAG_02078","SJAG_00577","SJAG_02295","SJAG_00571","SJAG_03214","SJAG_02720","SJAG_04163","SJAG_04538","SJAG_02573","SJAG_01713","SJAG_01629","SJAG_04529","SJAG_02469","SJAG_02279","SJAG_01511","SJAG_03500","SJAG_00249","SJAG_04427","SJAG_00076","SJAG_00643","SJAG_04435","SJAG_04222","SJAG_03954","SJAG_01654","SJAG_01724","SJAG_02551","SJAG_01504","SJAG_03601","SJAG_05009","SJAG_04497","SJAG_03995","SJAG_01870","SJAG_01008","SJAG_03301","SJAG_02879","SJAG_04293","SJAG_02554","SJAG_03993","SJAG_04949","SJAG_01412","SJAG_00225","SJAG_02304","SJAG_03469","SJAG_01440","SJAG_01810","SJAG_00498","SJAG_01433","SJAG_03937","SJAG_05276","SJAG_00961","SJAG_02668","SJAG_03291","SJAG_04079","SJAG_04034","SJAG_03498","SJAG_00414","SJAG_03849","SJAG_00888","SJAG_01315","SJAG_02843","SJAG_04022","SJAG_03711","SJAG_04783","SJAG_03460","SJAG_02688"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61855,65097,65297,65836,66477,68043,117293,118611],"is_not":false,"summary":null,"term":"GO:0006397"},{"annotations":[109625,74098,77255,70206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[81523,98317,97812,110179,93940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000380"},{"annotations":[119822],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[106655,94776,89447,95305,94665,113923,106909,120221,117276,90202,100968,100011,106616,111770,102188,69196,115544,113261,113534,95284,99055,92449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180010"},{"annotations":[79744,58363,107697],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000349"},{"annotations":[106769,74892,79113,111498],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000350"},{"annotations":[98117,105836,91781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090615"},{"annotations":[100383,66358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031124"},{"annotations":[74893,103140],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000389"},{"annotations":[112020,114335,81193,97466,104448,104609,96788,117227,93402,99710,115247,112584,112598,107801,97045,95845],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[120730],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000348"},{"annotations":[120907,98077,68770,111737,73824,79347,82115,115431,59439,74636,65630,94530,80685,97051,97813,75228,99271,119212,57096,65447,78178,97200,78401,75864,104312,120561,94957,96588,75949,94509,93639,76812,112468,76300,116337,98713,114625,72176,76855,109577,78857,89234,72896,97658,81780,62888,67935,90811,72516,99551,77297,79431,81149,97841,106590,75898,98318,79602,73552,65051,94732,110817,116843,77850,79147,59518,60241,68922,73806,119969,72148,93941,116343,74982,77245,109822,74546,77276,93992,95428,81134,119017,81154,77515,77751,106875,57718,58361,79141,113246,69429,108693,76054,76393,80100,115816,77472,90334,79745,118865,102522,115138,104374,65480,75835,80163,104605,105108,76398,78627,81618,73562,77722,93255,106428,73382,66401,104925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045292"},{"annotations":[76015,79064],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006376"},{"annotations":[120423,91299],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905746"},{"annotations":[94000,75780,77089,112885],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0048026"},{"annotations":[107409,94733,66125,113493,115037],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0000381"},{"annotations":[100442],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905744"},{"annotations":[77902],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0050684"},{"annotations":[95587],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0048024"},{"annotations":[77574,107410,73958,103638,80713,75658,95217,77903,73805],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000245"},{"annotations":[80449,76657,64563,57277,89587],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000390"},{"annotations":[65485],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000393"},{"annotations":[73460,63145,74440,81111,98714,110932,77463,66347,97842,115248,91300,78892,117099,106466],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000387"},{"annotations":[77815,107411,79430,108480,64135,116367,74333,114216],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000244"},{"annotations":[102524],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000388"},{"annotations":[114418,115826,108694],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903241"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"mRNA metabolic 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processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"mRNA maturation","type":"related"}],"termid":"GO:0006397","terms_by_termid":{"GO:0000244":null,"GO:0000245":null,"GO:0000348":null,"GO:0000349":null,"GO:0000350":null,"GO:0000354":null,"GO:0000380":null,"GO:0000381":null,"GO:0000387":null,"GO:0000388":null,"GO:0000389":null,"GO:0000390":null,"GO:0000393":null,"GO:0000395":null,"GO:0006370":null,"GO:0006376":null,"GO:0006397":null,"GO:0031124":null,"GO:0045292":null,"GO:0048024":null,"GO:0048026":null,"GO:0050684":null,"GO:0090615":null,"GO:0180010":null,"GO:1903241":null,"GO:1905744":null,"GO:1905746":null}}


id: PBO:0036370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl9, DIPSY family","termid":"PBO:0036370"}


id: PBO:0082750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sec13p-Sec31p complex of the COPII vesicle coat; COPII coat is required for vesicle formation in ER to Golgi transport; mutant has increased aneuploidy tolerance","termid":"PBO:0082750"}


id: PBO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Sds22","termid":"PBO:0001618"}


id: GO:1900007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.","definition_xrefs":["PMID:15020466","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:1900007)","synonyms":[{"name":"regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:1900007"}


id: GO:0004135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the (1->6) glycosidic linkages present.","definition_xrefs":["EC:3.2.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"amylo-alpha-1,6-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.33-RXN","Reactome:R-HSA-71593"],"synonyms":[{"name":"amylo-1,6-glucosidase activity","type":"exact"},{"name":"amylopectin 1,6-glucosidase activity","type":"related"},{"name":"dextrin 6-alpha-D-glucosidase activity","type":"related"},{"name":"dextrin-1,6-glucosidase activity","type":"related"},{"name":"glycogen phosphorylase-limit dextrin alpha-1,6-glucohydrolase activity","type":"related"}],"termid":"GO:0004135"}


id: PBO:0048792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i3","termid":"PBO:0048792"}


id: PBO:0034741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex subunit, RNA-binding protein Rbm8","termid":"PBO:0034741"}


id: PBO:0113376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cysteine synthase; localized to the mitochondrial outer membrane; interacts with TCD1 and TCD2, likely forming a complex","termid":"PBO:0113376"}


id: GO:0072287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric distal tubule are generated and organized. The metanephric distal tubule is a metanephric nephron tubule that begins at the macula densa and extends to the metanephric connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal tubule morphogenesis","termid":"GO:0072156"},{"relation_name":"is_a","term_name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric distal tubule morphogenesis","termid":"GO:0072287"}


id: PR:G2TRR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.11","synonyms":[{"name":"Spom972h-SPBPB21E7.11","type":"exact"}],"termid":"PR:G2TRR9"}


id: FYPO:0001283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during a cellular response to nitrogen starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during cellular response to nitrogen starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to nitrogen starvation","type":"related"},{"name":"decreased protein level during cellular response to nitrogen depletion","type":"exact"},{"name":"decreased protein level during cellular response to nitrogen deprivation","type":"exact"},{"name":"decreased protein level during nitrogen starvation","type":"exact"},{"name":"reduced protein level during cellular response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0001283"}


id: GO:0110009
data:
  {"annotated_genes":["SJAG_03011","SJAG_00938","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59220],"is_not":false,"summary":null,"term":"GO:0110009"},{"annotations":[118162,110074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"}]},"cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a formin-nucleated actin cable.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle organization","termid":"GO:0061572"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"formin-nucleated actin cable organization","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0110009","terms_by_termid":{"GO:0070649":null,"GO:0110009":null}}


id: GO:1903112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GOC:bhm","GOC:TermGenie","GO_REF:0000058","PMID:24339919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"},{"relation_name":"is_a","term_name":"positive regulation of single strand break repair","termid":"GO:1903518"},{"relation_name":"positively_regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"positive regulation of single-strand break repair via homologous recombination","synonyms":[{"name":"activation of single-strand break repair via homologous recombination","type":"narrow"},{"name":"up regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"up-regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"upregulation of single-strand break repair via homologous recombination","type":"exact"}],"termid":"GO:1903112"}


id: PBO:0044561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 2","termid":"PBO:0044561"}


id: PBO:0046755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOC7 pseudogene 1","termid":"PBO:0046755"}


id: PBO:0082340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 5' to 3' RNA/DNA and DNA helicase; subunit of the exosome-associated Nrd1p complex that mediates 3' end formation of snRNAs, snoRNAs, CUTs and some mRNAs; helicase-independent role in transcription-coupled repair; coordinates replication with transcription, associating with moving forks and preventing errors that occur when forks encounter transcribed regions; homolog of Senataxin, implicated in Ataxia-Oculomotor Apraxia 2 and a dominant form of juvenile ALS","termid":"PBO:0082340"}


id: MONDO:0033644
data:
  {"annotated_genes":["SJAG_00983"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87590],"is_not":false,"summary":null,"term":"MONDO:0033644"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00983":null},"genotype_count":0,"is_obsolete":false,"name":"microcornea, rod-cone dystrophy, cataract, and posterior staphyloma 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1755099","GARD:18383","OMIM:619082","UMLS:C5436769"],"synonyms":[{"name":"MRCS1","type":"exact"}],"termid":"MONDO:0033644","terms_by_termid":{"MONDO:0033644":null},"xrefs":{"Monarch":{"xref_id":"0033644"}}}


id: GO:0071311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acetate","termid":"GO:0010034"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acetate","termid":"GO:0071311"}


id: PBO:0051934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 5","termid":"PBO:0051934"}


id: GO:0042739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a drug that has originated internally within the cell or organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete endogenous drug catabolic process (obsolete GO:0042739)","synonyms":[{"name":"endogenous drug breakdown","type":"exact"},{"name":"endogenous drug catabolism","type":"exact"},{"name":"endogenous drug degradation","type":"exact"}],"termid":"GO:0042739"}


id: PBO:0046371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 6","termid":"PBO:0046371"}


id: PBO:0048653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 3","termid":"PBO:0048653"}


id: PBO:0051738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS6L antisense RNA 1","termid":"PBO:0051738"}


id: GO:0021765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cingulate gyrus over time from its initial formation until its mature state. The cingulate gyrus is a ridge in the cerebral cortex located dorsal to the corpus callosum.","definition_xrefs":["GOC:jid","ISBN:0878937420","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cingulate gyrus development","termid":"GO:0021765"}


id: PBO:0062953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1","termid":"PBO:0062953"}


id: FYPO:0001532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of S phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic S phase progression","termid":"FYPO:0003246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal duration of mitotic S phase","termid":"FYPO:0001532"}


id: MONDO:0003121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the middle cranial fossa.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle cranial fossa meningioma","secondary_identifiers":["NCIT:C5586","MEDGEN:277369","UMLS:C1334757","DOID:4749"],"synonyms":[{"name":"meningioma (disease) of middle cranial fossa","type":"exact"},{"name":"meningioma of middle cranial fossa","type":"exact"},{"name":"meningioma of the middle cranial fossa","type":"exact"},{"name":"middle cranial fossa meningioma (disease)","type":"exact"}],"termid":"MONDO:0003121","xrefs":{"Monarch":{"xref_id":"0003121"}}}


id: PBO:0056423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage receptor with collagenous structure","termid":"PBO:0056423"}


id: PBO:0062588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 3","termid":"PBO:0062588"}


id: FYPO:0001449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular trehalose level","synonyms":[{"name":"normal cellular trehalose accumulation","type":"related"},{"name":"normal cellular trehalose level during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during vegetative growth","type":"exact"}],"termid":"FYPO:0001449"}


id: MONDO:1010100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare complication of hypothyroidism characterized by altered mental status, hypothermia, and symptoms related to the slowing of other organ systems.","definition_xrefs":["PMID:33083180","PMID:38279788","PMID:34194879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism","termid":"MONDO:0005420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myxedema coma","termid":"MONDO:1010100","xrefs":{"Monarch":{"xref_id":"1010100"}}}


id: PBO:0088246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIA","termid":"PBO:0088246"}


id: PBO:0113166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol hexakisphosphate (IP6) and inositol heptakisphosphate (IP7) kinase; generation of high energy inositol pyrophosphates by Kcs1p is required for many processes such as vacuolar biogenesis, stress response, RNA polymerase I-mediated rRNA transcription and telomere maintenance; phosphorylated by the AMPK Snf1p, leading to reduced levels of pyrophosphorylated IP7, increased filamentous and invasive growth and increased cell elongation","termid":"PBO:0113166"}


id: FYPO:0004603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide and is elongated.","definition_xrefs":["PomBase:mah","PMID:7957061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, elongated cell","synonyms":[{"name":"inviable following spore germination, without cell division, elongated cell","type":"exact"},{"name":"inviable germinated spore, without cell division, elongated cell","type":"exact"},{"name":"lethal after spore germination, without cell division, elongated cell","type":"exact"}],"termid":"FYPO:0004603"}


id: GO:0110163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic anaphase B (spindle phase three).","definition_xrefs":["PMID:27697865","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation (spindle phase three)","termid":"GO:0110162"},{"relation_name":"is_a","term_name":"negative regulation of mitotic spindle elongation","termid":"GO:1902845"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle elongation (spindle phase three)","termid":"GO:0061805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic spindle elongation (spindle phase three)","termid":"GO:0110163"}


id: PBO:0085628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Fe-S cluster transfer to mitochondrial clients; protects [4Fe-4S] clusters from damage due to oxidative stress; acts along with Bol3 at a late step in the transfer of [4Fe-4S] clusters from the ISA complex to client proteins; Fe-S loaded homodimer at steady state; similar to NifU, a bacterial protein required for Fe/S cluster maturation; ortholog of the human NFU1, mutations of which are associated with Multiple Mitochondria Dysfunctions Syndrome (MMDS1)","termid":"PBO:0085628"}


id: MONDO:0044750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Arenaviridae infectious disease","termid":"MONDO:0005650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lassa virus infectious disease","secondary_identifiers":["MEDGEN:923253","SCTID:721779001","UMLS:C1617072"],"synonyms":[{"name":"Lassa virus infection","type":"exact"},{"name":"infection caused by Lassa virus","type":"exact"}],"termid":"MONDO:0044750","xrefs":{"Monarch":{"xref_id":"0044750"}}}


id: GO:1905511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myosin II filament assembly.","definition_xrefs":["GO_REF:0000058","PMID:27237792","PMID:7691416","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of myosin II filament assembly","termid":"GO:0043520"},{"relation_name":"is_a","term_name":"positive regulation of myosin II filament organization","termid":"GO:1904901"},{"relation_name":"positively_regulates","term_name":"myosin II filament assembly","termid":"GO:0031036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of myosin II filament assembly","synonyms":[{"name":"activation of myosin II filament assembly","type":"narrow"},{"name":"activation of myosin II polymerization","type":"related"},{"name":"positive regulation of myosin II polymerization","type":"related"},{"name":"up regulation of myosin II filament assembly","type":"exact"},{"name":"up regulation of myosin II polymerization","type":"related"},{"name":"up-regulation of myosin II filament assembly","type":"exact"},{"name":"up-regulation of myosin II polymerization","type":"related"},{"name":"upregulation of myosin II filament assembly","type":"exact"},{"name":"upregulation of myosin II polymerization","type":"related"}],"termid":"GO:1905511"}


id: GO:0042447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hormone catabolic process","synonyms":[{"name":"hormone breakdown","type":"exact"},{"name":"hormone catabolism","type":"exact"},{"name":"hormone degradation","type":"exact"}],"termid":"GO:0042447"}


id: GO:0043104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the activity of the enzyme GTP cyclohydrolase I.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of GTP cyclohydrolase I activity (obsolete GO:0043104)","synonyms":[{"name":"activation of GTP cyclohydrolase I activity","type":"narrow"},{"name":"stimulation of GTP cyclohydrolase I activity","type":"narrow"},{"name":"up regulation of GTP cyclohydrolase I activity","type":"exact"},{"name":"up-regulation of GTP cyclohydrolase I activity","type":"exact"},{"name":"upregulation of GTP cyclohydrolase I activity","type":"exact"}],"termid":"GO:0043104"}


id: PBO:0077236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 2","termid":"PBO:0077236"}


id: PBO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 3","termid":"PBO:0046140"}


id: MONDO:0700000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant polycystic kidney disease in which the cause of the disease is a mutation in the ALG9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005240"],"is_obsolete":false,"name":"ALG9-associated autosomal dominant polycystic kidney disease","synonyms":[{"name":"ALG9 autosomal dominant polycystic kidney disease","type":"exact"},{"name":"ALG9 related autosomal dominant polycystic kidney disease","type":"exact"},{"name":"ALG9-associated ADPKD","type":"exact"},{"name":"ALG9-associated autosomal dominant polycystic kidney disease","type":"exact"},{"name":"Autosomal Dominant Polycystic Kidney Disease - ALG9","type":"exact"},{"name":"autosomal dominant polycystic kidney disease caused by mutation in ALG9","type":"exact"}],"termid":"MONDO:0700000","xrefs":{"Monarch":{"xref_id":"0700000"}}}


id: MONDO:0017068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"upper thoracic spina bifida aperta","secondary_identifiers":["icd11.foundation:772010291","Orphanet:268740","GARD:20957"],"termid":"MONDO:0017068","xrefs":{"Monarch":{"xref_id":"0017068"}}}


id: FYPO:0006828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in the cytosol is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular zinc level","termid":"FYPO:0001552"},{"relation_name":"is_a","term_name":"increased level of substance in cytosol","termid":"FYPO:0001948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cytosolic zinc level","synonyms":[{"name":"increased cytosolic zinc ion level","type":"exact"},{"name":"increased cytosolic zinc ion level during vegetative growth","type":"exact"},{"name":"increased cytosolic zinc level during mitotic cell cycle","type":"related"},{"name":"increased level of zinc ions in cytosol","type":"exact"},{"name":"increased levels of free cytosolic zinc","type":"exact"}],"termid":"FYPO:0006828"}


id: GO:0032229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, GABAergic","termid":"GO:0032228"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, GABAergic","termid":"GO:0051932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, GABAergic","synonyms":[{"name":"down regulation of synaptic transmission, GABAergic","type":"exact"},{"name":"down-regulation of synaptic transmission, GABAergic","type":"exact"},{"name":"downregulation of synaptic transmission, GABAergic","type":"exact"},{"name":"inhibition of synaptic transmission, GABAergic","type":"narrow"}],"termid":"GO:0032229"}


id: PBO:0090932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi 4,6-pyruvylated galactose (PvGal) residue biosynthesis protein Pvg2","termid":"PBO:0090932"}


id: PBO:0091832
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HAP5","termid":"PBO:0091832"}


id: PBO:0030988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleosome_positioning_in_euchromatin","termid":"PBO:0030988"}


id: PR:Q9USQ5-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ornithine decarboxylase antizyme (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9USQ5-1.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USQ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine decarboxylase antizyme (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9USQ5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme isoform 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9USQ5-1"],"synonyms":[{"name":"Spom972h-spa1/iso:1","type":"exact"}],"termid":"PR:Q9USQ5-1"}


id: PBO:0060609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 2 like","termid":"PBO:0060609"}


id: GO:2000612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thyroid-stimulating hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"thyroid-stimulating hormone secretion","termid":"GO:0070460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of thyroid-stimulating hormone secretion","synonyms":[{"name":"regulation of TSH secretion","type":"exact"},{"name":"regulation of thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:2000612"}


id: MONDO:0006552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the hair follicles. Causes include excessive perspiration, skin infections, and skin wounds.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"folliculitis","secondary_identifiers":["ICD9:704.8","DOID:4409","UMLS:C0016436","Wikipedia:Folliculitis","EFO:1000702","MEDGEN:4752","NCIT:C94408","SCTID:13600006","MESH:D005499"],"synonyms":[{"name":"dermatitis of hair follicle","type":"exact"},{"name":"hair follicle dermatitis","type":"exact"}],"termid":"MONDO:0006552","xrefs":{"Monarch":{"xref_id":"0006552"}}}


id: MONDO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 2q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the long arm (q) of chromosome 2. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 2q deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 2","termid":"MONDO:0016867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 2","secondary_identifiers":["icd11.foundation:754787315","UMLS:C0795804","MEDGEN:162770","MESH:C538315","Orphanet:262010","GARD:3744"],"synonyms":[{"name":"2q deletion","type":"related"},{"name":"2q monosomy","type":"related"},{"name":"chromosome 2q deletion","type":"related"},{"name":"deletion 2q","type":"related"},{"name":"monosomy 2q","type":"related"},{"name":"partial deletion of chromosome 2q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 2","type":"exact"},{"name":"partial monosomy 2q","type":"related"},{"name":"partial monosomy of chromosome 2q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 2","type":"exact"}],"termid":"MONDO:0016901","xrefs":{"Monarch":{"xref_id":"0016901"}}}


id: SO:0002361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for cytosolic LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_rRNA_gene","termid":"SO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_LSU_rRNA_gene","synonyms":[{"name":"cytosolic large subunit rRNA gene","type":"exact"}],"termid":"SO:0002361"}


id: PBO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty related protein Fft3","termid":"PBO:0001340"}


id: GO:0106393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"}


id: PBO:0078256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 30","termid":"PBO:0078256"}


id: MONDO:0001546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloarthropathy","termid":"MONDO:0005095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypermobility of coccyx","secondary_identifiers":["DOID:12537","ICD9:724.71","SCTID:202809009","UMLS:C0158295","MEDGEN:510502","icd11.foundation:588794167"],"synonyms":[{"name":"coccygeal hypermobility syndrome","type":"exact"},{"name":"hypermobility of the coccyx","type":"exact"}],"termid":"MONDO:0001546","xrefs":{"Monarch":{"xref_id":"0001546"}}}


id: FYPO:0002194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a larger volume than normal and spheroid shape, and contain one or more septa each. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen septated spheroid cells (obsolete FYPO:0002194)","synonyms":[{"name":"inviable microcolony, enlarged septated spheroid vegetative cells","type":"related"},{"name":"inviable microcolony, septated large spheroid vegetative cells","type":"related"},{"name":"inviable microcolony, septated, spheroid vegetative cells with increased cell size","type":"related"},{"name":"inviable microcolony, septated, spheroid vegetative cells with increased cell volume","type":"exact"},{"name":"inviable microcolony, swollen septated rounded cells","type":"exact"},{"name":"inviable microcolony, swollen septated spheroid vegetative cells","type":"exact"}],"termid":"FYPO:0002194"}


id: MONDO:0014385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the SLC24A4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta hypomaturation type 2A5","secondary_identifiers":["MEDGEN:863015","OMIM:615887","UMLS:C4014578","GARD:16028","DOID:0110063"],"synonyms":[{"name":"AI2A5","type":"exact"},{"name":"SLC24A4 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in SLC24A4","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation type IIA5","type":"exact"},{"name":"amelogenesis imperfecta type IIA5","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA5","type":"related"},{"name":"amelogenesis imperfecta, type IIA5","type":"exact"}],"termid":"MONDO:0014385","xrefs":{"Monarch":{"xref_id":"0014385"}}}


id: MONDO:0033304
data:
  {"annotated_genes":["SJAG_01926"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027048"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Y-linked disease","termid":"MONDO:0000428"},{"relation_name":"is_a","term_name":"nonsyndromic genetic hearing loss","termid":"MONDO:0019497"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"nonsyndromic deafness, Y-linked","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111757","OMIMPS:400043"],"termid":"MONDO:0033304","terms_by_termid":{"MONDO:0027048":null},"xrefs":{"Monarch":{"xref_id":"0033304"}}}


id: FYPO:0004504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which proteasome localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal proteasome localization","synonyms":[{"name":"normal proteasome localisation","type":"exact"},{"name":"normal proteasome localization during mitotic cell cycle","type":"related"},{"name":"normal proteasome localization during vegetative growth","type":"exact"},{"name":"normal proteasome location","type":"related"}],"termid":"FYPO:0004504"}


id: PBO:0082841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constitutively expressed acid phosphatase similar to Pho5p; brought to the cell surface by transport vesicles; hydrolyzes thiamin phosphates in the periplasmic space, increasing cellular thiamin uptake; expression is repressed by thiamin","termid":"PBO:0082841"}


id: MONDO:0004606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pyoderma gangrenosum (obsolete MONDO:0004606)","termid":"MONDO:0004606","xrefs":{"Monarch":{"xref_id":"0004606"}}}


id: GO:0043055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of a nematode during the facultative diapause of the dauer (enduring) larval stage of nematode development.","definition_xrefs":["WB_REF:wm2003ab740","GOC:cab1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of diapause","termid":"GO:0071982"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of dauer","synonyms":[{"name":"maintenance of dormancy in the nematode","type":"exact"}],"termid":"GO:0043055"}


id: FYPO:0008337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' ends of non-polyadenylated RNA molecules occurs to a lower extent than normal.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"decreased 3' end uridylation of non-polyadenylated RNA","termid":"FYPO:0008337"}


id: GO:0015846
data:
  {"annotated_genes":["SJAG_02125","SJAG_03817","SJAG_02060","SJAG_04134","SJAG_02059","SJAG_02344","SJAG_04469"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902047"},{"annotations":[72306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015847"},{"annotations":[108321],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902267"},{"annotations":[57948,70544,70447,62337,62361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"},{"annotations":[70446,62360,70543,62336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The directed movement of polyamines, organic compounds containing two or more amino groups, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null,"SJAG_03817":null,"SJAG_04134":null,"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"polyamine transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0015846","terms_by_termid":{"GO:0015847":null,"GO:1902047":null,"GO:1902267":null,"GO:1903710":null,"GO:1903711":null}}


id: GO:0070329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The substitution of a selenium atom for a sulfur atom in a ribonucleotide in a tRNA molecule.","definition_xrefs":["GOC:jsg","PMID:14594807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium compound metabolic process","termid":"GO:0001887"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA seleno-modification","synonyms":[{"name":"tRNA base modification to selenouridine","type":"exact"}],"termid":"GO:0070329"}


id: GO:0051409
data:
  {"annotated_genes":["SJAG_04063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071500"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["PMID:15925705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrosative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051409","terms_by_termid":{"GO:0071500":null}}


id: PBO:0049943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIC ZBTB transcriptional repressor 1","termid":"PBO:0049943"}


id: GO:0048331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the axial mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"axial mesoderm morphogenesis","termid":"GO:0048319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm structural organization","synonyms":[{"name":"axial mesoderm structural organisation","type":"exact"}],"termid":"GO:0048331"}


id: PBO:0017699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyrimidine nucleotide transmembrane transporter Rim2 (predicted)","termid":"PBO:0017699"}


id: GO:0019319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"hexose biosynthetic process","synonyms":[{"name":"hexose anabolism","type":"exact"},{"name":"hexose biosynthesis","type":"exact"},{"name":"hexose formation","type":"exact"},{"name":"hexose synthesis","type":"exact"}],"termid":"GO:0019319"}


id: PBO:0086190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to heat shock transcription factor; multicopy suppressor of pseudohyphal growth defects of ammonium permease mutants","termid":"PBO:0086190"}


id: GO:0071639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of monocyte chemotactic protein-1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of monocyte chemotactic protein-1 production","termid":"GO:0071637"},{"relation_name":"positively_regulates","term_name":"monocyte chemotactic protein-1 production","termid":"GO:0071605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of monocyte chemotactic protein-1 production","synonyms":[{"name":"positive regulation of CCL2 production","type":"exact"},{"name":"positive regulation of MCP-1 production","type":"exact"}],"termid":"GO:0071639"}


id: MONDO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inability to efficiently utilize and/or sustain binocular vision.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"strabismus","termid":"MONDO:0003432"},{"relation_name":"is_a","term_name":"vision disorder","termid":"MONDO:0021084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binocular vision disease","secondary_identifiers":["MEDGEN:571","SCTID:83275001","DOID:12667","EFO:0009535","ICD9:368.30","UMLS:C0005461","NCIT:C34422"],"synonyms":[{"name":"binocular vision disorder","type":"exact"},{"name":"simultaneous visual perception without fusion","type":"narrow"}],"termid":"MONDO:0001564","xrefs":{"Monarch":{"xref_id":"0001564"}}}


id: PBO:0063356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCOTH pseudogene 1","termid":"PBO:0063356"}


id: MONDO:0009931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary atresia with intact ventricular septum (PA-IVS) is a rare form of cyanotic congenital heart malformation characterized by severe cyanosis and tachypnea. PA-IVS presents significant morphologic diversity: at the end of the spectrum are patients with a mildly hypoplastic and tripartite right ventricle (RV) and mild tricuspid valve (TV) hypoplasia, and at the other end are patients with severe RV and TV hypoplasia, often with RV-dependent coronary circulation.","definition_xrefs":["Orphanet:1208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hypoplastic right heart syndrome","termid":"MONDO:0020291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary atresia-intact ventricular septum syndrome","secondary_identifiers":["MEDGEN:87491","NANDO:2200253","OMIM:265150","icd11.foundation:131289265","GARD:4600","SCTID:253590009","NANDO:1200707","MESH:C562832","UMLS:C0344975","NCIT:C99032"],"synonyms":[{"name":"pulmonary atresia with intact ventricular septum","type":"related"},{"name":"pulmonary valve atresia with intact ventricular septum","type":"exact"}],"termid":"MONDO:0009931","xrefs":{"Monarch":{"xref_id":"0009931"}}}


id: GO:0046724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of oxalic acid, ethanedioic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxalate transport","termid":"GO:0019532"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"oxalic acid secretion","synonyms":[{"name":"oxalate secretion","type":"exact"}],"termid":"GO:0046724"}


id: PBO:0072399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 4","termid":"PBO:0072399"}


id: PBO:0050723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 9","termid":"PBO:0050723"}


id: FYPO:0000500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitophagy is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitophagy","termid":"FYPO:0007590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitophagy","synonyms":[{"name":"decreased autophagy of mitochondrion","type":"exact"},{"name":"mitophagy: decreased","type":"related"},{"name":"reduced mitophagy","type":"exact"}],"termid":"FYPO:0000500"}


id: GO:0102796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,4-dihydroxybenzaldehyde + O2 + H2O = H+ + 3,4-dihydroxybenzoate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete protocatechualdehyde:oxygen oxidoreductase activity (obsolete GO:0102796)","termid":"GO:0102796"}


id: PBO:0064125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin family receptor for egg jelly","termid":"PBO:0064125"}


id: PBO:0039044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL4 intronic transcript 1","termid":"PBO:0039044"}


id: PBO:0056112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA2 pseudogene 3","termid":"PBO:0056112"}


id: MONDO:0001695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectropion","termid":"MONDO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"senile ectropion","secondary_identifiers":["SCTID:71659009","DOID:13356","UMLS:C0155193","ICD9:374.11","MEDGEN:509841"],"synonyms":[{"name":"involutional ectropion","type":"exact"}],"termid":"MONDO:0001695","xrefs":{"Monarch":{"xref_id":"0001695"}}}


id: GO:0008038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuronal cell in a multicellular organism interprets its surroundings.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"},{"relation_name":"part_of","term_name":"neuron development","termid":"GO:0048666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron recognition","synonyms":[{"name":"neuronal cell recognition","type":"exact"}],"termid":"GO:0008038"}


id: GO:0035637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of information occurring at the level of a multicellular organism.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multicellular organismal signaling (obsolete GO:0035637)","synonyms":[{"name":"multicellular organismal signalling","type":"exact"}],"termid":"GO:0035637"}


id: MONDO:0004234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Epstein-Barr virus negative disorder with a chronic clinical course affecting predominantly adults and characterized by the proliferation of large granular lymphocytes with natural killer cell immunophenotype. The T-cell receptor genes are not rearranged.","definition_xrefs":["NCIT:C39591"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type IV hypersensitivity disease","termid":"MONDO:0002459"},{"relation_name":"is_a","term_name":"neoplasm of mature T-cells or NK-cells","termid":"MONDO:0005169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"chronic lymphoproliferative disorder of NK-cells","secondary_identifiers":["ICDO:9831/3","UMLS:C1512709","MEDGEN:268922","SCTID:722955006","DOID:7465","icd11.foundation:921755282","Orphanet:512017","GARD:22072"],"synonyms":[{"name":"CLPD-NK","type":"exact"},{"name":"CNKL","type":"exact"},{"name":"NK-LGL leukaemia","type":"exact"},{"name":"NK-LGL leukemia","type":"exact"},{"name":"NK-LGLL","type":"exact"},{"name":"NK-cell large granular lymphocyte lymphocytosis","type":"exact"},{"name":"NK-cell lineage granular lymphocyte proliferative disorder","type":"exact"},{"name":"NK-type lymphoproliferative disorder of granular lymphocytes","type":"exact"},{"name":"chronic NK lymphocytosis","type":"exact"},{"name":"chronic NK-LGL lymphoproliferative disorder","type":"exact"},{"name":"chronic NK-cell lymphocytosis","type":"exact"},{"name":"chronic NK-large granular lymphocyte lymphoproliferative disorder","type":"exact"},{"name":"chronic lymphoproliferative disorder of NK-cells","type":"exact"},{"name":"chronic lymphoproliferative disorder of natural killer cells","type":"related"},{"name":"indolent NK-cell lymphoproliferative disorder","type":"exact"},{"name":"indolent large granular NK-cell lymphoproliferative disorder","type":"exact"},{"name":"natural killer-cell large granular lymphocyte leukaemia","type":"exact"},{"name":"natural killer-cell large granular lymphocyte leukemia","type":"exact"}],"termid":"MONDO:0004234","xrefs":{"Monarch":{"xref_id":"0004234"}}}


id: PBO:0087021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 40S subunit protein S0A; required for maturation of 18S rRNA along with Rps0Bp; deletion of either RPS0 gene reduces growth rate, deletion of both genes is lethal; homologous to human ribosomal protein SA and bacterial S2; RPS0A has a paralog, RPS0B, that arose from the whole genome duplication;","termid":"PBO:0087021"}


id: GO:0080069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7-methylthioheptyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 7-methylthioheptyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"gene_count":0,"genotype_count":0,"name":"obsolete 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity (obsolete GO:0080069)","termid":"GO:0080069"}


id: GO:0043854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an monoatomic ion by a channel that opens in response to a mechanical stress and when a cyclic nucleotide has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:22206667","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensitive monoatomic ion channel activity","termid":"GO:0008381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"cyclic nucleotide-gated mechanosensitive monoatomic ion channel activity","synonyms":[{"name":"MscS","type":"related"},{"name":"cyclic nucleotide gated mechanosensitive ion channel activity","type":"exact"},{"name":"cyclic nucleotide regulated mechanosensitive ion channel","type":"exact"},{"name":"cyclic nucleotide-gated mechanosensitive ion channel activity","type":"broad"},{"name":"cyclic nucleotide-regulated mechanosensitive ion channel","type":"exact"},{"name":"cyclic nucleotide-regulated small mechanosensitive ion channel","type":"related"},{"name":"small conductance mechanosensitive ion channel","type":"exact"}],"termid":"GO:0043854"}


id: PBO:0072202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 1","termid":"PBO:0072202"}


id: FYPO:0006760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromeres do not detach properly from the spindle pole body (SPB) during the meiotic cell cycle. Normally, centromeres are located at the SPB during mitotic interphase, and upon entering meiosis, telomeres cluster at the SPB, followed by centromere detachment from the SPB.","definition_xrefs":["PomBase:mah","PMID:27611693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal centromere detachment from spindle pole body during meiotic chromosome organization","synonyms":[{"name":"abnormal centromere detachment from SPB during meiotic chromosome organization","type":"exact"},{"name":"abnormal centromere detachment from spindle pole body during meiotic chromosome organisation","type":"exact"},{"name":"abnormal centromere detachment from spindle pole body involved in chromosome organization involved in meiotic cell cycle","type":"exact"},{"name":"abnormal centromere detachment from spindle pole body involved in meiotic chromosome organization","type":"exact"},{"name":"defective centromere detachment from the SPB during karyogamy and meiotic prophase","type":"exact"}],"termid":"FYPO:0006760"}


id: MONDO:0011095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the TNNT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1D","secondary_identifiers":["GARD:15332","MESH:C563306","OMIM:601494","DOID:0110426","MEDGEN:316943","UMLS:C1832243"],"synonyms":[{"name":"CMD1D","type":"exact"},{"name":"TNNT2 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1D","type":"related"},{"name":"cardiomyopathy, dilated, type 1D","type":"exact"},{"name":"dilated cardiomyopathy 1D","type":"exact"},{"name":"dilated cardiomyopathy type 1D","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in TNNT2","type":"exact"},{"name":"left ventricular noncompaction 6","type":"related"}],"termid":"MONDO:0011095","xrefs":{"Monarch":{"xref_id":"0011095"}}}


id: PBO:0067972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 274","termid":"PBO:0067972"}


id: PBO:0016902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U3","termid":"PBO:0016902"}


id: MONDO:0010739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taqi polymorphism","secondary_identifiers":["OMIM:313480","UMLS:C1839238","MEDGEN:374172"],"synonyms":[{"name":"TAQ1","type":"related"},{"name":"TaqI polymorphism","type":"related"},{"name":"Taqi polymorphism","type":"exact"}],"termid":"MONDO:0010739","xrefs":{"Monarch":{"xref_id":"0010739"}}}


id: MONDO:0040676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the great vessels.","definition_xrefs":["NCIT:C4575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"great vessel cancer","secondary_identifiers":["UMLS:C3665405","MEDGEN:777096"],"synonyms":[{"name":"cancer of great vessel of heart","type":"exact"},{"name":"great vessel cancer","type":"exact"},{"name":"great vessel of heart cancer","type":"exact"},{"name":"malignant great vessel neoplasm","type":"exact"},{"name":"malignant great vessel of heart neoplasm","type":"exact"},{"name":"malignant great vessel tumor","type":"exact"},{"name":"malignant great vessel tumour","type":"exact"},{"name":"malignant neoplasm of great vessel of heart","type":"exact"}],"termid":"MONDO:0040676","xrefs":{"Monarch":{"xref_id":"0040676"}}}


id: GO:0099544
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The extracellular region immediately adjacent to to a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"perisynaptic space","synonyms":[{"name":"extrasynaptic space","type":"exact"}],"termid":"GO:0099544"}


id: GO:0032347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of aldosterone metabolic process","termid":"GO:0032344"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"aldosterone biosynthetic process","termid":"GO:0032342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of aldosterone biosynthetic process","termid":"GO:0032347"}


id: MONDO:0004355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic leukemia that occurs during childhood.","definition_xrefs":["NCIT:C4989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"childhood leukemia","secondary_identifiers":["DOID:7757","UMLS:C1332977","MEDGEN:234132","NANDO:2100002"],"synonyms":[{"name":"childhood leukaemia (disease)","type":"exact"},{"name":"childhood leukemia","type":"exact"},{"name":"childhood leukemia (disease)","type":"exact"},{"name":"leukaemia","type":"broad"},{"name":"leukaemia (disease) of childhood","type":"exact"},{"name":"leukemia","type":"broad"},{"name":"leukemia (disease) of childhood","type":"exact"},{"name":"paediatric leukaemia (disease)","type":"exact"},{"name":"pediatric leukemia (disease)","type":"exact"}],"termid":"MONDO:0004355","xrefs":{"Monarch":{"xref_id":"0004355"}}}


id: PBO:0003104
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHIskey","termid":"PBO:0003104"}


id: MONDO:0017412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 2q31.1 microduplication syndrome (obsolete MONDO:0017412)","termid":"MONDO:0017412","xrefs":{"Monarch":{"xref_id":"0017412"}}}


id: PBO:0041903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBFA2/RUNX1 partner transcriptional co-repressor 3","termid":"PBO:0041903"}


id: PBO:0031582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_rate","termid":"PBO:0031582"}


id: GO:0039667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus or viral genetic material into a host cell which occurs through retraction of a virion-bound pilus.","definition_xrefs":["VZ:981","GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus retraction (obsolete GO:0039667)","termid":"GO:0039667"}


id: PBO:0065566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin F receptor","termid":"PBO:0065566"}


id: PBO:0080847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 2","termid":"PBO:0080847"}


id: GO:1904007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phospholipase D activity.","definition_xrefs":["PMID:11211872","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phospholipase D activity (obsolete GO:1904007)","synonyms":[{"name":"activation of choline phosphatase activity","type":"narrow"},{"name":"activation of lecithinase D activity","type":"narrow"},{"name":"activation of lipophosphodiesterase II activity","type":"narrow"},{"name":"activation of phosphatidylcholine phosphatidohydrolase activity","type":"narrow"},{"name":"activation of phospholipase D activity","type":"narrow"},{"name":"positive regulation of choline phosphatase activity","type":"exact"},{"name":"positive regulation of lecithinase D activity","type":"exact"},{"name":"positive regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"positive regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up regulation of choline phosphatase activity","type":"exact"},{"name":"up regulation of lecithinase D activity","type":"exact"},{"name":"up regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"up regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up regulation of phospholipase D activity","type":"exact"},{"name":"up-regulation of choline phosphatase activity","type":"exact"},{"name":"up-regulation of lecithinase D activity","type":"exact"},{"name":"up-regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"up-regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up-regulation of phospholipase D activity","type":"exact"},{"name":"upregulation of choline phosphatase activity","type":"exact"},{"name":"upregulation of lecithinase D activity","type":"exact"},{"name":"upregulation of lipophosphodiesterase II activity","type":"exact"},{"name":"upregulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"upregulation of phospholipase D activity","type":"exact"}],"termid":"GO:1904007"}


id: GO:0032012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ARF protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"ARF protein signal transduction","termid":"GO:0032011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ARF protein signal transduction","termid":"GO:0032012"}


id: GO:0047753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choline sulfate + H2O = choline + H+ + sulfate.","definition_xrefs":["RHEA:20820","EC:3.1.6.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"choline-sulfatase activity","secondary_identifiers":["KEGG_REACTION:R01028","MetaCyc:CHOLINE-SULFATASE-RXN"],"synonyms":[{"name":"choline-sulfate sulfohydrolase activity","type":"related"},{"name":"choline-sulphatase activity","type":"exact"}],"termid":"GO:0047753"}


id: FYPO:0005552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cleavage furrow rim is decreased. The rim is the part of the cleavage furrow closest to the contractile ring.","definition_xrefs":["PMID:27082518","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cleavage furrow","termid":"FYPO:0005551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cleavage furrow rim","synonyms":[{"name":"decreased protein localisation to cleavage furrow rim","type":"exact"},{"name":"decreased protein localization to cleavage furrow rim during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cleavage furrow rim during vegetative growth","type":"exact"},{"name":"reduced protein localization to cleavage furrow rim","type":"exact"}],"termid":"FYPO:0005552"}


id: PBO:0088015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I membrane protein involved in autophagy and the Cvt pathway; may be involved in membrane delivery to the phagophore assembly site","termid":"PBO:0088015"}


id: GO:0006631
data:
  {"annotated_genes":["SJAG_04570","SJAG_04913","SJAG_03553","SJAG_00102","SJAG_00734","SJAG_01356","SJAG_04107","SJAG_02769","SJAG_03943","SJAG_01271","SJAG_00947","SJAG_02717","SJAG_00706","SJAG_00902","SJAG_03526","SJAG_01300","SJAG_03180","SJAG_01402","SJAG_04972","SJAG_01238","SJAG_03471","SJAG_03198","SJAG_02763","SJAG_02885","SJAG_01458","SJAG_00630","SJAG_01396","SJAG_03313","SJAG_00099","SJAG_03130","SJAG_03972","SJAG_02007","SJAG_01946","SJAG_03909","SJAG_00305","SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74100,78666,95356,103538],"is_not":false,"summary":null,"term":"GO:0006631"},{"annotations":[74991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[109407,79136,93273,103948,69060,78709,71958,110658,96869,65060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[73118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[81535,75432,113283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[93781,79505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[79509,93782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[76780,99036,99738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[106228,74016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[115735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"},{"annotations":[80659,79046,110308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001676"},{"annotations":[72587],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[99561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[76916],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[71976,76967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[105372,79507,93785,75429,74377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_00102":null,"SJAG_00305":null,"SJAG_00630":null,"SJAG_00706":null,"SJAG_00734":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_01238":null,"SJAG_01271":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01396":null,"SJAG_01402":null,"SJAG_01458":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02717":null,"SJAG_02763":null,"SJAG_02769":null,"SJAG_02885":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03471":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03909":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04007":null,"SJAG_04107":null,"SJAG_04570":null,"SJAG_04913":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-211935","Reactome:R-HSA-434313","Reactome:R-HSA-8978868","Wikipedia:Fatty_acid_metabolism"],"synonyms":[{"name":"fatty acid metabolism","type":"exact"}],"termid":"GO:0006631","terms_by_termid":{"GO:0001561":null,"GO:0001676":null,"GO:0006631":null,"GO:0006633":null,"GO:0006636":null,"GO:0009062":null,"GO:0009107":null,"GO:0010510":null,"GO:0019367":null,"GO:0030497":null,"GO:0034625":null,"GO:0042758":null,"GO:0042759":null,"GO:0042761":null,"GO:0045717":null,"GO:1900535":null}}


id: PBO:0071414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 20","termid":"PBO:0071414"}


id: PBO:0067454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 578, pseudogene","termid":"PBO:0067454"}


id: PBO:0080801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 7","termid":"PBO:0080801"}


id: FYPO:0001271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes; some, but not all, DNA may be moved towards the ends of an elongated mitotic spindle. Chromosomes do not segregate into two equal masses.","definition_xrefs":["PMID:22711988","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal mitotic sister chromatid segregation","termid":"FYPO:0003241"},{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000337","FYPO:0001320","FYPO:0000641","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"incomplete, unequal mitotic sister chromatid segregation","synonyms":[{"name":"incomplete, unequal mitotic chromosome segregation","type":"exact"},{"name":"incomplete, unequal mitotic sister chromatid segregation during vegetative growth","type":"exact"},{"name":"incomplete, unequal mitotic sister chromatid separation","type":"related"},{"name":"incomplete, unequal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001271"}


id: MONDO:0007424
data:
  {"annotated_genes":["SJAG_00279","SJAG_01943"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87155,87156],"is_not":false,"summary":null,"term":"MONDO:0007424"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the DIAPH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:124900","MESH:C565121","MEDGEN:343767","UMLS:C1852282","DOID:0110541"],"synonyms":[{"name":"DFNA1","type":"narrow"},{"name":"DIAPH1 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"Konigsmark syndrome","type":"exact"},{"name":"LFHL1","type":"exact"},{"name":"autosomal dominant deafness 1","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 1","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in DIAPH1","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 1","type":"narrow"},{"name":"deafness, autosomal dominant 1","type":"narrow"},{"name":"deafness, autosomal dominant 1, with or without thrombocytopenia","type":"narrow"},{"name":"deafness, autosomal dominant type 1","type":"narrow"},{"name":"deafness, progressive Low tone","type":"narrow"},{"name":"hereditary Low frequency hearing loss","type":"related"},{"name":"hereditary low frequency hearing loss 1","type":"exact"}],"termid":"MONDO:0007424","terms_by_termid":{"MONDO:0007424":null},"xrefs":{"Monarch":{"xref_id":"0007424"}}}


id: MOD:02056
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-threonine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-threonine residue","synonyms":[{"name":"XlnkThr","type":"exact"}],"termid":"MOD:02056"}


id: FYPO:0002859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the non-growing cell tip is abolished. The new cell tip formed upon cell division does not grow until after new end take-off.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to non-growing cell tip","synonyms":[{"name":"abolished protein localisation to non-growing cell tip","type":"exact"},{"name":"abolished protein localization to new cell end","type":"related"},{"name":"abolished protein localization to new cell tip","type":"related"},{"name":"abolished protein localization to new non-growing cell tip","type":"exact"},{"name":"abolished protein localization to non-growing cell end","type":"exact"},{"name":"abolished protein localization to non-growing cell tip during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to non-growing cell tip during vegetative growth","type":"exact"},{"name":"protein localization to non-growing cell tip abolished","type":"exact"}],"termid":"FYPO:0002859"}


id: MONDO:0007029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by branchial arch anomalies (branchial clefts, fistulae, cysts), hearing impairment (malformations of the auricle with pre-auricular pits, conductive or sensorineural hearing impairment), and renal malformations (urinary tree malformation, renal hypoplasia or agenesis, renal dysplasia, renal cysts).","definition_xrefs":["Orphanet:107"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"branchio-oto-renal syndrome","secondary_identifiers":["DOID:14702","GARD:10147","icd11.foundation:504227287","ICD9:759.89","MEDGEN:82693","NANDO:1200675","NCIT:C98983","OMIMPS:113650","SCTID:290006","UMLS:C0265234","Wikipedia:Branchio-oto-renal_syndrome","MedDRA:10071135","MESH:D019280"],"synonyms":[{"name":"Branchio oto renal syndrome","type":"related"},{"name":"Branchio-Oto-renal syndrome","type":"exact"},{"name":"Branchio-otorenal dysplasia","type":"exact"},{"name":"Melnick-Fraser syndrome","type":"exact"},{"name":"bor syndrome","type":"related"},{"name":"branchio-oto-renal syndrome","type":"exact"},{"name":"branchiootorenal dysplasia","type":"exact"},{"name":"branchiootorenal syndrome","type":"exact"}],"termid":"MONDO:0007029","xrefs":{"Monarch":{"xref_id":"0007029"}}}


id: MONDO:0024541
data:
  {"annotated_genes":["SJAG_03805"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88244],"is_not":false,"summary":null,"term":"MONDO:0024541"}]},"cv_name":"mondo","definition":"Any tricho-hepato-enteric syndrome in which the cause of the disease is a mutation in the TTC37 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichohepatoenteric syndrome","termid":"MONDO:0009105"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"trichohepatoenteric syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111415","MEDGEN:1644087","UMLS:C4551982","OMIM:222470"],"synonyms":[{"name":"THES1","type":"related"},{"name":"TRICHOHEPATOENTERIC syndrome 1","type":"exact"},{"name":"TTC37 tricho-hepato-enteric syndrome","type":"exact"},{"name":"The syndrome","type":"related"},{"name":"diarrhea, fatal infantile, with trichorrhexis nodosa","type":"related"},{"name":"diarrhea, syndromic","type":"related"},{"name":"tricho-hepato-enteric syndrome caused by mutation in TTC37","type":"exact"},{"name":"trichohepatoenteric syndrome 1","type":"exact"}],"termid":"MONDO:0024541","terms_by_termid":{"MONDO:0024541":null},"xrefs":{"Monarch":{"xref_id":"0024541"}}}


id: MONDO:0016828
data:
  {"annotated_genes":["SJAG_04984","SJAG_01417"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008785"},{"annotations":[87616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014804"}]},"cv_name":"mondo","definition":"Congenital autosomal recessive sideroblastic anemia (ARSA) is a non-syndromic, microcytic/hypochromic sideroblastic anemia, present from early infancy and characterized by severe microcytic anemia, which is not pyridoxine responsive, and increased serum ferritin.","definition_xrefs":["Orphanet:260305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01417":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive sideroblastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:895586","SCTID:717050005","GARD:17240","UMLS:C4274077"],"synonyms":[{"name":"ARSA","type":"exact"},{"name":"congenital sideroblastic anaemia","type":"broad"},{"name":"congenital sideroblastic anemia","type":"broad"},{"name":"sideroblastic anemia, autosomal recessive","type":"exact"}],"termid":"MONDO:0016828","terms_by_termid":{"MONDO:0008785":null,"MONDO:0014804":null},"xrefs":{"Monarch":{"xref_id":"0016828"}}}


id: PBO:0079857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B6 (pseudogene)","termid":"PBO:0079857"}


id: MONDO:0011564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cone-rod dystrophy that has material basis in variation in the chromosome region 1q12-q24.","definition_xrefs":["PMID:11053266","DOID:0111014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 8","secondary_identifiers":["GARD:15381","MEDGEN:381360","OMIM:605549","UMLS:C1854180","MESH:C565322"],"synonyms":[{"name":"CORD8","type":"exact"},{"name":"cone-rod dystrophy 8","type":"exact"},{"name":"cone-rod dystrophy type 8","type":"exact"}],"termid":"MONDO:0011564","xrefs":{"Monarch":{"xref_id":"0011564"}}}


id: MONDO:1010044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microvillus inclusion disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvillus inclusion disease, non-human animal","secondary_identifiers":["OMIA:002247"],"termid":"MONDO:1010044","xrefs":{"Monarch":{"xref_id":"1010044"}}}


id: PBO:0075970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 10","termid":"PBO:0075970"}


id: GO:0032050
data:
  {"annotated_genes":["SJAG_01748"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75384],"is_not":false,"summary":null,"term":"GO:0032050"}]},"cv_name":"molecular_function","definition":"Binding to a clathrin heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin binding","termid":"GO:0030276"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"clathrin heavy chain binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032050","terms_by_termid":{"GO:0032050":null}}


id: GO:0004152
data:
  {"annotated_genes":["SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + A = AH(2) + orotate.","definition_xrefs":["RHEA:18073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-73569","MetaCyc:DIHYDROOROTATE-DEHYDROGENASE-RXN","KEGG_REACTION:R01868"],"termid":"GO:0004152","terms_by_termid":{"GO:0106430":null}}


id: GO:0090402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular senescence process associated with the dismantling of a cell as a response to oncogenic stress, such as the activation of the Ras oncogenic family.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oncogene-induced cell senescence","synonyms":[{"name":"OIS","type":"exact"}],"termid":"GO:0090402"}


id: FYPO:0005551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cleavage furrow is decreased.","definition_xrefs":["PomBase:mah","PMID:27082518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cleavage furrow","synonyms":[{"name":"decreased protein localisation to cleavage furrow","type":"exact"},{"name":"decreased protein localization to cleavage furrow during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cleavage furrow during vegetative growth","type":"exact"},{"name":"reduced protein localization to cleavage furrow","type":"exact"}],"termid":"FYPO:0005551"}


id: FYPO:0006381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered cellular reactive oxygen species level","termid":"FYPO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular reactive oxygen species level during nitrogen starvation","synonyms":[{"name":"increased ROS accumulation during nitrogen starvation","type":"related"},{"name":"increased cellular ROS accumulation during nitrogen starvation","type":"related"},{"name":"increased cellular ROS level during nitrogen starvation","type":"exact"},{"name":"increased cellular reactive oxygen species accumulation during nitrogen starvation","type":"related"},{"name":"increased cellular reactive oxygen species level during nitrogen depletion","type":"exact"},{"name":"increased cellular reactive oxygen species level during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006381"}


id: GO:1903298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hypoxia-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:bf","GOC:TermGenie","PMID:24553947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to hypoxia","termid":"GO:1900038"},{"relation_name":"is_a","term_name":"regulation of hypoxia-induced intrinsic apoptotic signaling pathway","termid":"GO:1903297"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to hypoxia","type":"narrow"},{"name":"negative regulation of hypoxia-induced apoptosis","type":"related"},{"name":"negative regulation of hypoxic stress-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"protection against hypoxia-induced apoptosis","type":"related"}],"termid":"GO:1903298"}


id: FYPO:0000618
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121410,121411,121412],"is_not":false,"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase of mitosis is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic anaphase progression","termid":"FYPO:0000616"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of mitotic anaphase","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000617"],"single_locus_annotated_genes":["SJAG_01956","SJAG_03575","SJAG_03351"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"delayed mitotic anaphase progression","type":"related"},{"name":"increased duration of anaphase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic anaphase during vegetative growth","type":"exact"},{"name":"increased duration of mitotic anaphase progression","type":"exact"},{"name":"mitotic cell cycle progression in anaphase: delayed","type":"related"},{"name":"mitotic cell cycle progression in anaphase: increased duration","type":"related"},{"name":"prolonged mitotic anaphase","type":"exact"}],"termid":"FYPO:0000618","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: PBO:0047828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP1 antisense RNA 1","termid":"PBO:0047828"}


id: GO:0003178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the valve of the coronary sinus over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary sinus valve development","termid":"GO:0003178"}


id: SO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat at the ends of and within the sequence for which it has functional significance other than long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:terminal","type":"exact"},{"name":"terminal repeat","type":"exact"}],"termid":"SO:0002201"}


id: PBO:0030582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_serine_level","termid":"PBO:0030582"}


id: PBO:0112998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha arrestin, substrate of calcineurin; controls nutrient-mediated intracellular sorting of permease Gap1p; interacts with AP-1 subunit Apl4p; dephosphorylation of Aly1p required for the endocytosis of Dip5p; may regulate endocytosis of plasma membrane proteins by recruiting ubiquitin ligase Rsp5p to plasma membrane targets; regulates intracellular pH; ALY1 has a paralog, ALY2, that arose from the whole genome duplication","termid":"PBO:0112998"}


id: GO:0098775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assembly of curli, extracellular fibers produced by enteric bacteria. This process occurs outside the cell, where it is coupled to secretion across the cell outer membrane via nucleation by elements of the transporter complex.","definition_xrefs":["PMID:16704339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus assembly","termid":"GO:0009297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"curli assembly","termid":"GO:0098775"}


id: PBO:0028593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_heat","termid":"PBO:0028593"}


id: GO:0034367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a complex, resulting in the alteration of an existing complex.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah","GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-containing complex remodeling","synonyms":[{"name":"macromolecular complex remodeling","type":"related"},{"name":"macromolecular complex remodelling","type":"related"},{"name":"protein-containing complex remodelling","type":"exact"}],"termid":"GO:0034367"}


id: PBO:0078082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 2B","termid":"PBO:0078082"}


id: PR:Q10496
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TBC1 domain family member 2B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.09","secondary_identifiers":["UniProtKB:Q10496"],"synonyms":[{"name":"SPAC26F1.09","type":"related"},{"name":"Spom972h-TBC1D2B","type":"exact"}],"termid":"PR:Q10496"}


id: PBO:0058221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4511","termid":"PBO:0058221"}


id: MOD:01723
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01723"}


id: GO:0052690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3,6-trichlorohydroquinone + 2 glutathione = 2,6-dichlorohydroquinone + glutathione disulfide + HCl.","definition_xrefs":["RHEA:56832","PMID:1459949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"trichloro-p-hydroquinone reductive dehalogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0315"],"synonyms":[{"name":"pentaerythritol tetranitrate reductase activity","type":"related"},{"name":"tetrachlorohydroquinone reductive dehalogenase activity","type":"related"},{"name":"trichlorohydroquinone reductive dehalogenase activity","type":"exact"},{"name":"xenobiotic reductase activity","type":"broad"}],"termid":"GO:0052690"}


