# terms

id: MONDO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm arising from the sweat glands.","definition_xrefs":["NCIT:C3398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"sweat gland disorder","termid":"MONDO:0006615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sweat gland neoplasm","secondary_identifiers":["DOID:2664","MEDGEN:21039","UMLS:C0038987","ICDO:8400/1","ICD9:239.2","MONDO:0021219","EFO:1001204","SCTID:126490003","MESH:D013544"],"synonyms":[{"name":"neoplasm of sweat gland","type":"exact"},{"name":"neoplasm of the sweat gland","type":"exact"},{"name":"sweat gland neoplasm","type":"exact"},{"name":"sweat gland neoplasm (disease)","type":"exact"},{"name":"sweat gland neoplasms","type":"exact"},{"name":"sweat gland tumor","type":"exact"},{"name":"sweat gland tumor (morphologic abnormality)","type":"exact"},{"name":"sweat gland tumor NOS (morphologic abnormality)","type":"exact"},{"name":"sweat gland tumour","type":"exact"},{"name":"sweat gland tumour (morphologic abnormality)","type":"exact"},{"name":"sweat gland tumour NOS (morphologic abnormality)","type":"exact"},{"name":"tumor of sweat gland","type":"exact"},{"name":"tumor of the sweat gland","type":"exact"},{"name":"tumour of sweat gland","type":"exact"},{"name":"tumour of the sweat gland","type":"exact"}],"termid":"MONDO:0002381","xrefs":{"Monarch":{"xref_id":"0002381"}}}


id: GO:0034191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an apolipoprotein A-I receptor.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apolipoprotein receptor binding","termid":"GO:0034190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"apolipoprotein A-I receptor binding","termid":"GO:0034191"}


id: PBO:0051057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3-9","termid":"PBO:0051057"}


id: PBO:0039766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 1 (Colton blood group)","termid":"PBO:0039766"}


id: GO:0005958
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large protein complex which is involved in the repair of DNA double-strand breaks and, in mammals, V(D)J recombination events. It consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer Ku, the nuclear phosphoprotein XRCC4 or a homolog thereof, and DNA ligase IV.","definition_xrefs":["GOC:jl","PMID:12235392","GOC:mah","PMID:17072889","PMID:10854421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonhomologous end joining complex","termid":"GO:0070419"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"DNA-dependent protein kinase-DNA ligase 4 complex","secondary_identifiers":["GO:0005959"],"termid":"GO:0005958"}


id: MONDO:0014316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Alzheimer disease in which the cause of the disease is a mutation in the PLD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease","termid":"MONDO:0004975"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Alzheimer disease 19","secondary_identifiers":["DOID:0110051","OMIM:615711","MEDGEN:816679","UMLS:C3810349"],"synonyms":[{"name":"AD19","type":"exact"},{"name":"Alzheimer disease 19","type":"exact"},{"name":"Alzheimer disease 19 late onset","type":"exact"},{"name":"Alzheimer disease 19, late-onset","type":"related"},{"name":"Alzheimer disease caused by mutation in PLD3","type":"exact"},{"name":"Alzheimer disease type 19","type":"exact"},{"name":"Alzheimer's disease 19","type":"exact"},{"name":"Alzheimer's disease type 19","type":"exact"},{"name":"PLD3 Alzheimer disease","type":"exact"}],"termid":"MONDO:0014316","xrefs":{"Monarch":{"xref_id":"0014316"}}}


id: PBO:0013029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf16","termid":"PBO:0013029"}


id: PBO:0029336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_phosphorylation","termid":"PBO:0029336"}


id: PATO:0000608
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's affording blocked passage or view.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closure","termid":"PATO:0000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"closed","synonyms":[{"name":"blocked","type":"related"}],"termid":"PATO:0000608"}


id: GO:0019431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetyl-CoA from ethanol via acetaldehyde.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"acetyl-CoA biosynthetic process","termid":"GO:0006085"},{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0044281","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"acetyl-CoA biosynthetic process from ethanol","synonyms":[{"name":"acetyl-CoA anabolism from ethanol","type":"exact"},{"name":"acetyl-CoA formation from ethanol","type":"exact"},{"name":"acetyl-CoA synthesis from ethanol","type":"exact"}],"termid":"GO:0019431"}


id: PBO:0070097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 11 pseudogene","termid":"PBO:0070097"}


id: MONDO:0003524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated neuroendocrine tumor that arises from the stomach. It produces gastrin and it may be associated with Zollinger-Ellison syndrome.","definition_xrefs":["NCIT:C27444"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"gastric cancer","termid":"MONDO:0001056"},{"relation_name":"is_a","term_name":"gastrin-producing neuroendocrine tumor","termid":"MONDO:0003523"},{"relation_name":"is_a","term_name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric gastrin-producing neuroendocrine tumor","secondary_identifiers":["MEDGEN:232230","DOID:5579","UMLS:C1333767"],"synonyms":[{"name":"gastric G-cell gastrin producing tumor","type":"exact"},{"name":"gastric G-cell gastrin producing tumour","type":"exact"},{"name":"gastric gastrin producing tumor","type":"exact"},{"name":"gastric gastrin producing tumour","type":"exact"},{"name":"gastric gastrin-producing NET","type":"exact"},{"name":"gastric gastrin-producing neuroendocrine tumor","type":"exact"},{"name":"gastric gastrinoma","type":"related"},{"name":"gastrin producing neuroendocrine tumor of the stomach","type":"exact"},{"name":"gastrin producing neuroendocrine tumour of the stomach","type":"exact"},{"name":"gastrin producing tumor of the stomach","type":"exact"},{"name":"gastrin producing tumour of the stomach","type":"exact"},{"name":"gastrin-producing neuroendocrine tumor of stomach","type":"exact"},{"name":"gastrin-producing neuroendocrine tumor of the stomach","type":"exact"},{"name":"gastrin-producing neuroendocrine tumour of stomach","type":"exact"},{"name":"gastrin-producing neuroendocrine tumour of the stomach","type":"exact"},{"name":"stomach gastrin-producing neuroendocrine tumor","type":"exact"},{"name":"stomach gastrin-producing neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0003524","xrefs":{"Monarch":{"xref_id":"0003524"}}}


id: PBO:0013013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snu23","termid":"PBO:0013013"}


id: GO:0061577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other by means of a high voltage-gated calcium channel.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"calcium ion transmembrane transport via high voltage-gated calcium channel","synonyms":[{"name":"generation of L-type calcium current","type":"related"}],"termid":"GO:0061577"}


id: MONDO:0009710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, skeletal muscle channelopathy characterized by slow muscle relaxation after contraction (myotonia).","definition_xrefs":["Orphanet:614"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete congenital myotonia (obsolete MONDO:0016121)","termid":"MONDO:0016121"},{"relation_name":"excluded_subClassOf","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thomsen and Becker disease","secondary_identifiers":["MedDRA:10043461","NANDO:1200498","SCTID:726051002","ICD10CM:G71.12","NCIT:C84912","NANDO:1200497","MESH:D009224","ICD9:359.22","GARD:12301","DOID:2106","MedDRA:10028655"],"synonyms":[{"name":"Batten-Turner congenital myopathy","type":"related"},{"name":"myopathy, congenital","type":"related"},{"name":"myotonia congenita","type":"exact"}],"termid":"MONDO:0009710","xrefs":{"Monarch":{"xref_id":"0009710"}}}


id: PBO:0086389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative channel-like protein; similar to Fps1p; mediates passive diffusion of glycerol in the presence of ethanol","termid":"PBO:0086389"}


id: GO:0051826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synapse structural plasticity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of synapse structural plasticity","termid":"GO:0051823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synapse structural plasticity","synonyms":[{"name":"down regulation of synapse structural plasticity","type":"exact"},{"name":"down-regulation of synapse structural plasticity","type":"exact"},{"name":"downregulation of synapse structural plasticity","type":"exact"},{"name":"inhibition of synapse structural plasticity","type":"narrow"}],"termid":"GO:0051826"}


id: MOD:00294
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, an L-histidine residues, an L-serine residue and a four-iron four-sulfur cluster to bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); via pros nitrogen","type":"exact"},{"name":"bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide","type":"exact"},{"name":"tetra-mu3-sulfidobis(S-cysteinyliron)(N3'-histidinoiron)(O3-serinyliron)","type":"exact"}],"termid":"MOD:00294"}


id: PBO:0043521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3","termid":"PBO:0043521"}


id: FYPO:0001931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to gamma radiation is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to gamma radiation. The most common abnormality is for the cell cycle to progress as in the absence of gamma radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to gamma radiation","termid":"FYPO:0001930"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0003489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to gamma radiation","synonyms":[{"name":"abnormal mitotic cell cycle delay following gamma radiation","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to gamma radiation during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to gamma radiation","type":"exact"}],"termid":"FYPO:0001931"}


id: PBO:0034547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_localization_to_nucleus","termid":"PBO:0034547"}


id: PBO:0039520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 1","termid":"PBO:0039520"}


id: MOD:01249
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of iodouridine monophosphate with an L-tryptophan residue.","definition_xrefs":["PubMed:11567090","Unimod:292#W","PubMed:11112526","PubMed:6540775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodouridine monophosphate derivatized residue","termid":"MOD:00611"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodouridine monophosphate derivatized tryptophan","synonyms":[{"name":"Cross-link of (Iodo)-uracil MP with W,F,Y","type":"related"},{"name":"IodoU-AMP","type":"related"}],"termid":"MOD:01249"}


id: GO:0106075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the acetylation of an amino acid residue of a peptide or protein, according to the reaction: succinyl-CoA + peptide = CoA + N-succinylpeptide.","definition_xrefs":["PMID:29211711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"peptide N-succinyltransferase activity","termid":"GO:0106075"}


id: GO:0060520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by androgen binding to its receptor in the urogenital sinus mesenchyme that initiates prostate induction. Prostate induction is the close range interaction of the urogenital sinus mesenchyme and the urogenital sinus epithelium that causes the cells of the urogenital sinus epithelium to change their fates and specify the development of the prostate gland.","definition_xrefs":["GOC:tb","GOC:dph","PMID:18977204"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of prostate induction by androgen receptor signaling pathway (obsolete GO:0060520)","synonyms":[{"name":"activation of prostate induction by androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060520"}


id: GO:0018008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The myristoylation of the N-terminal glycine of proteins to form the derivative N-myristoyl-glycine.","definition_xrefs":["RESID:AA0059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein myristoylation","termid":"GO:0006499"},{"relation_name":"is_a","term_name":"peptidyl-glycine modification","termid":"GO:0018201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-glycine N-myristoylation","synonyms":[{"name":"N-terminal peptidyl-glycine N-myristylation","type":"exact"}],"termid":"GO:0018008"}


id: PBO:0055315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2743","termid":"PBO:0055315"}


id: MONDO:0010963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the WFS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 6","secondary_identifiers":["OMIM:600965","DOID:0110584","UMLS:C1833021","MEDGEN:331419","GARD:18101","MESH:C563421"],"synonyms":[{"name":"DFNA14","type":"narrow"},{"name":"DFNA38","type":"narrow"},{"name":"DFNA6","type":"narrow"},{"name":"WFS1 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 14","type":"narrow"},{"name":"autosomal dominant deafness 38","type":"narrow"},{"name":"autosomal dominant deafness 6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in WFS1","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 6","type":"narrow"},{"name":"deafness, autosomal dominant 14","type":"narrow"},{"name":"deafness, autosomal dominant 38","type":"narrow"},{"name":"deafness, autosomal dominant 6","type":"narrow"},{"name":"deafness, autosomal dominant 6/14/38","type":"narrow"},{"name":"deafness, autosomal dominant type 6","type":"narrow"}],"termid":"MONDO:0010963","xrefs":{"Monarch":{"xref_id":"0010963"}}}


id: GO:0090083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of inclusion body assembly","termid":"GO:0090083"}


id: MONDO:0020551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hydatidiform mole (obsolete MONDO:0020551)","termid":"MONDO:0020551","xrefs":{"Monarch":{"xref_id":"0020551"}}}


id: PBO:0055112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2531","termid":"PBO:0055112"}


id: PBO:0028537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028537"}


id: MONDO:0012552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple endocrine neoplasia type 4 (MEN4) is a very rare form of MEN, an inherited cancer syndrome, characterized by parathyroid and anterior pituitary tumors, possibly associated with adrenal, renal, and reproductive organ tumors.","definition_xrefs":["Orphanet:276152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple endocrine neoplasia","termid":"MONDO:0017169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"multiple endocrine neoplasia type 4","secondary_identifiers":["DOID:0080137","GARD:17275","NCIT:C157449","SCTID:715907003","UMLS:C1970712","MEDGEN:373469","icd11.foundation:157945677","MESH:C567059","OMIM:610755"],"synonyms":[{"name":"CDKN1B multiple endocrine neoplasia","type":"exact"},{"name":"MEN4","type":"exact"},{"name":"multiple endocrine neoplasia caused by mutation in CDKN1B","type":"exact"},{"name":"multiple endocrine neoplasia type 4","type":"exact"},{"name":"multiple endocrine neoplasia, type 4","type":"related"},{"name":"multiple endocrine neoplasia, type IV","type":"exact"}],"termid":"MONDO:0012552","xrefs":{"Monarch":{"xref_id":"0012552"}}}


id: PBO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal cellulose binding domain protein","termid":"PBO:0001806"}


id: GO:0010031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organismal movement by which the tip of a plant organ follows a spiral pattern as a consequence of growth.","definition_xrefs":["ISBN:0192801023","GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal movement","termid":"GO:0050879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circumnutation","termid":"GO:0010031"}


id: PBO:0063719
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamyl-peptidase I","termid":"PBO:0063719"}


id: PBO:0036489
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRyPtophan requiring","termid":"PBO:0036489"}


id: PBO:0061451
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 4 group A member 2","termid":"PBO:0061451"}


id: PBO:0087810
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telomere end-binding and capping protein; plays a key role with Pol12p in linking telomerase action with completion of lagging strand synthesis, and in a regulatory step required for telomere capping; similar to human Stn1","termid":"PBO:0087810"}


id: GO:0031541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of flavonoid biosynthetic process","termid":"GO:0009964"},{"relation_name":"is_a","term_name":"negative regulation of anthocyanin metabolic process","termid":"GO:0031538"},{"relation_name":"is_a","term_name":"regulation of anthocyanin biosynthetic process","termid":"GO:0031540"},{"relation_name":"negatively_regulates","term_name":"anthocyanin-containing compound biosynthetic process","termid":"GO:0009718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anthocyanin biosynthetic process","synonyms":[{"name":"down regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"down-regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"downregulation of anthocyanin biosynthetic process","type":"exact"},{"name":"inhibition of anthocyanin biosynthetic process","type":"narrow"},{"name":"negative regulation of anthocyanin anabolism","type":"exact"},{"name":"negative regulation of anthocyanin biosynthesis","type":"exact"},{"name":"negative regulation of anthocyanin formation","type":"exact"},{"name":"negative regulation of anthocyanin synthesis","type":"exact"}],"termid":"GO:0031541"}


id: PBO:0061726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACHT and WD repeat domain containing 2","termid":"PBO:0061726"}


id: MONDO:0010388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rolandic epilepsy-speech dyspraxia syndrome","termid":"MONDO:0015587"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"rolandic epilepsy, intellectual disability, and speech dyspraxia, X-linked","secondary_identifiers":["GARD:18282","OMIM:300643","MESH:C564467","MEDGEN:337150","UMLS:C1845070"],"synonyms":[{"name":"RESDX","type":"related"},{"name":"ROLANDIC epilepsy, intellectual disability, and speech dyspraxia, X-linked","type":"related"},{"name":"ROLANDIC epilepsy, mental retardation, and speech dyspraxia, X-linked","type":"related"},{"name":"rolandic epilepsy, impaired intellectual development, and speech dyspraxia","type":"exact"},{"name":"rolandic epilepsy, intellectual disability, and speech dyspraxia, X-linked","type":"exact"},{"name":"rolandic epilepsy, mental retardation, and speech dyspraxia, X-linked","type":"exact"}],"termid":"MONDO:0010388","xrefs":{"Monarch":{"xref_id":"0010388"}}}


id: PBO:0011405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chemical,_gene_product,_complex,_cellular_component,_biological_process,_molecular_function,_modification_or_sequence_feature","termid":"PBO:0011405"}


id: PBO:0083046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxyhypusine synthase; catalyzes formation of deoxyhypusine, the first step in hypusine biosynthesis; triggers posttranslational hypusination of translation elongation factor eIF-5A and regulates its intracellular levels; tetrameric; human homolog DHPS allows growth of yeast haploid dys1 null mutant after sporulation of heterozygous diploid","termid":"PBO:0083046"}


id: PBO:0071141
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 4","termid":"PBO:0071141"}


id: MONDO:0044716
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete STAG1-related intellectual disability-facial dysmorphism-gastroesophageal reflux syndrome (obsolete MONDO:0044716)","termid":"MONDO:0044716","xrefs":{"Monarch":{"xref_id":"0044716"}}}


id: PBO:0045622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 34 (pseudogene)","termid":"PBO:0045622"}


id: PBO:0036401
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  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ6 with an S. pombe MTS","termid":"PBO:0036401"}


id: GO:0048903
data:
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id: PBO:0088527
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase Fol3","termid":"PBO:0088527"}


id: PBO:0074403
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id: GO:1904639
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id: GO:0042221
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id: GO:0048309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The partitioning of endoplasmic reticulum between daughter cells at cell division.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum inheritance","synonyms":[{"name":"ER inheritance","type":"exact"}],"termid":"GO:0048309"}


id: GO:0032264
data:
  {"annotated_genes":["SJAG_06634","SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65904,77408],"is_not":false,"summary":null,"term":"GO:0032264"}]},"cv_name":"biological_process","definition":"Any process which produces inosine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IMP biosynthetic process","termid":"GO:0006188"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04123":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"IMP salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"termid":"GO:0032264","terms_by_termid":{"GO:0032264":null}}


id: GO:0004961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thromboxane A2 (TXA(2)) and transmitting the signal across the membrane to activate an associated G-protein.","definition_xrefs":["GOC:signaling","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thromboxane receptor activity","termid":"GO:0004960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thromboxane A2 receptor activity","synonyms":[{"name":"TXA(2) receptor activity","type":"exact"},{"name":"TXA2 receptor activity","type":"exact"}],"termid":"GO:0004961"}


id: MONDO:0013585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hydrolethalus syndrome in which the cause of the disease is a mutation in the KIF7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolethalus syndrome","termid":"MONDO:0006037"},{"relation_name":"is_a","term_name":"KIF7-related ciliopathy","termid":"MONDO:0800463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hydrolethalus syndrome 2","secondary_identifiers":["DOID:0111356","MEDGEN:481529","OMIM:614120","UMLS:C3279899","GARD:15759"],"synonyms":[{"name":"HLS2","type":"related"},{"name":"KIF7 hydrolethalus syndrome","type":"exact"},{"name":"hydrolethalus syndrome 2","type":"exact"},{"name":"hydrolethalus syndrome caused by mutation in KIF7","type":"exact"},{"name":"hydrolethalus syndrome type 2","type":"exact"}],"termid":"MONDO:0013585","xrefs":{"Monarch":{"xref_id":"0013585"}}}


id: GO:0043199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to sulfate, SO4(2-), a negatively charged small molecule.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"sulfate binding","termid":"GO:0043199"}


id: MONDO:0100021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood-onset epilepsy that is characterized by the presence of visually-induced focal occipital lobe seizures. A proportion of patients with this syndrome have developmental delays and learning difficulty.","direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset self-limited focal epilepsy syndrome","termid":"MONDO:0800502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"photosensitive occipital lobe epilepsy","synonyms":[{"name":"POLE","type":"exact"}],"termid":"MONDO:0100021","xrefs":{"Monarch":{"xref_id":"0100021"}}}


id: PBO:0089503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain protein Sqs1","termid":"PBO:0089503"}


id: PBO:0056762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15 pseudogene 1","termid":"PBO:0056762"}


id: GO:0009801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ester derivatives of cinnamic acid, phenylpropenoic acid.","definition_xrefs":["GOC:lr","GOC:yl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"cinnamic acid ester metabolic process","synonyms":[{"name":"cinnamic acid ester metabolism","type":"exact"}],"termid":"GO:0009801"}


id: MONDO:0015193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrops fetalis is a severe and challenging fetal condition usually defined as the excessive accumulation of fetal fluid within the fetal extravascular compartments and body cavities that manifests as edema, pleural and pericardial effusion and ascites. It is the end-stage of a wide variety of disorders. The cause may be immunologic (immune hydrops fetalis, IHF) or non immunologic (non-immune hydrops fetalis, NIHF), depending on the presence or absence of maternal antibodies against fetal red cell antigens (ABO incompatibility or rhesus (Rh) incompatibility).","definition_xrefs":["Orphanet:1041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrops fetalis","secondary_identifiers":["GARD:2783","MedDRA:10020529","MESH:D015160","HP:0001789","MEDGEN:6947","NCIT:C84767","SCTID:276508000","UMLS:C0020305"],"synonyms":[{"name":"HF","type":"exact"},{"name":"familial non-immune hydrops fetalis","type":"related"},{"name":"fetal anasarca","type":"exact"},{"name":"fetal edema","type":"related"},{"name":"fetal hydrops","type":"exact"},{"name":"foetal anasarca","type":"exact"},{"name":"foetal hydrops","type":"exact"},{"name":"foetal oedema","type":"related"},{"name":"generalised foetal oedema","type":"exact"},{"name":"generalized fetal edema","type":"exact"},{"name":"hydrops fetalis","type":"exact"},{"name":"hydrops fetalis (disease)","type":"exact"},{"name":"hydrops fetalis nonimmune","type":"related"},{"name":"idiopathic hydrops fetalis","type":"related"}],"termid":"MONDO:0015193","xrefs":{"Monarch":{"xref_id":"0015193"}}}


id: PBO:0069238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 493, pseudogene","termid":"PBO:0069238"}


id: GO:0051921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 L-glutamine + adenosylcob(III)yrinate a,c-diamide + 4 ATP + 4 H2O = 4 L-glutamate + adenosylcobyrate + 4 ADP + 8 H+ + 4 phosphate.","definition_xrefs":["EC:6.3.5.10","RHEA:23256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"adenosylcobyric acid synthase (glutamine-hydrolyzing) activity","secondary_identifiers":["KEGG_REACTION:R05225","MetaCyc:R345-RXN"],"synonyms":[{"name":"5'-deoxy-5'-adenosylcobyrinic-acid-a,c-diamide:L-glutamine amido-ligase activity","type":"exact"},{"name":"Ado-cobyric acid synthase [glutamine hydrolyzing] activity","type":"exact"},{"name":"CobQ activity","type":"broad"},{"name":"adenosylcobyric acid synthase (glutamine-hydrolysing) activity","type":"exact"},{"name":"adenosylcobyrinic-acid-a,c-diamide:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"cobyric acid synthase activity","type":"related"}],"termid":"GO:0051921"}


id: PBO:0048386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycyl-tRNA synthetase 1","termid":"PBO:0048386"}


id: MONDO:0004312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the suprasellar region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suprasellar meningioma","secondary_identifiers":["NCIT:C6776","DOID:7634","MEDGEN:234911","UMLS:C1336535"],"synonyms":[{"name":"meningioma (disease) of sella turcica","type":"exact"},{"name":"sella turcica meningioma (disease)","type":"exact"}],"termid":"MONDO:0004312","xrefs":{"Monarch":{"xref_id":"0004312"}}}


id: PBO:0066750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 48","termid":"PBO:0066750"}


id: PATO:0002246
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A force which is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased force","synonyms":[{"name":"decreased force amplitude","type":"exact"}],"termid":"PATO:0002246"}


id: PBO:0002931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vid24 family protein (predicted)","termid":"PBO:0002931"}


id: FYPO:0000943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by normal spore morphology, i.e. the size, shape, and structure of the spore are indistinguishable from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell morphology","termid":"FYPO:0000672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spore morphology","termid":"FYPO:0000943"}


id: MONDO:0007771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial progressive hyperpigmentation","termid":"MONDO:0013648"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hyperpigmentation with or without hypopigmentation, familial progressive","secondary_identifiers":["GARD:18073","DOID:0111373","UMLS:C1840392","MEDGEN:333550","OMIM:145250"],"synonyms":[{"name":"FPHH","type":"related"},{"name":"hyperpigmentation with or without hypopigmentation","type":"exact"},{"name":"hyperpigmentation with or without hypopigmentation, familial progressive","type":"exact"},{"name":"hyperpigmentation, familial progressive, 2","type":"related"},{"name":"hyperpigmentation, familial progressive, 2, formerly","type":"related"},{"name":"macules, hereditary congenital hypopigmented and hyperpigmented","type":"exact"},{"name":"melanosis universalis hereditaria","type":"related"},{"name":"melanosis, universal","type":"exact"}],"termid":"MONDO:0007771","xrefs":{"Monarch":{"xref_id":"0007771"}}}


id: MONDO:0800444
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800445"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Birt-Hogg-Dube syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0346010","OMIMPS:135150","MEDGEN:91070"],"synonyms":[{"name":"BHD","type":"exact"}],"termid":"MONDO:0800444","terms_by_termid":{"MONDO:0800445":null},"xrefs":{"Monarch":{"xref_id":"0800444"}}}


id: MONDO:0017515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly of fingers","termid":"MONDO:0017451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly of fingers, unilateral","secondary_identifiers":["icd11.foundation:825108601","Orphanet:295128"],"synonyms":[{"name":"short fingers, unilateral","type":"exact"}],"termid":"MONDO:0017515","xrefs":{"Monarch":{"xref_id":"0017515"}}}


id: PR:000050546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein gtr2 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PPRO:DAN","PomBase:VW","PMID:27227887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein gtr2 (Schizosaccharomyces pombe)","termid":"PR:000050544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gtr2/GTP+","pombase_gene_id":"SPCC777.05","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein gtr2, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gtr2/GTP+","type":"exact"},{"name":"gtr2/GTP+","type":"exact"},{"name":"Gtr2/GTP+","type":"exact"}],"termid":"PR:000050546"}


id: GO:0042472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the inner ear are generated and organized. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"ear morphogenesis","termid":"GO:0042471"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear morphogenesis","termid":"GO:0042472"}


id: PBO:0089986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase Otg3","termid":"PBO:0089986"}


id: MONDO:0001135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving observing an unsuspecting person who is naked, disrobing, or engaging in sexual activity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voyeurism","secondary_identifiers":["DOID:10834","MEDGEN:12126","SCTID:63835008","ICD9:302.82","MESH:D014843","UMLS:C0042979","ICD10CM:F65.3","NCIT:C94360"],"termid":"MONDO:0001135","xrefs":{"Monarch":{"xref_id":"0001135"}}}


id: GO:0036130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H2 + NADPH + H+ -> prostaglandin F2alpha + NADP+. This reaction is the reduction of prostaglandin H2 ((5Z,13E)-(15S)-9alpha,11alpha-Epidioxy-15-hydroxyprosta-5,13-dienoate) to prostaglandin F2alpha ((5Z,13E)-(15S)-9alpha,11alpha,15-Trihydroxyprosta-5,13-dienoate).","definition_xrefs":["PMID:14979715","KEGG_REACTION:R02264","PMID:10622721","PMID:16475787","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"prostaglandin H2 endoperoxidase reductase activity","secondary_identifiers":["RHEA:45312","Reactome:R-HSA-2161549"],"synonyms":[{"name":"PGH2 9,11-endoperoxidase","type":"exact"},{"name":"PGH2 9-,11-endoperoxide reductase","type":"exact"}],"termid":"GO:0036130"}


id: MONDO:0100166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any intellectual disability in which the cause of the disease is a mutation in the PPP2R1A gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2R1A-related intellectual disability","termid":"MONDO:0100166","xrefs":{"Monarch":{"xref_id":"0100166"}}}


id: PBO:0048738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase","termid":"PBO:0048738"}


id: PBO:0029685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0029685"}


id: GO:0047235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + UDP-galactose = 6F-alpha-D-galactosylsucrose + UDP.","definition_xrefs":["MetaCyc:2.4.1.167-RXN","EC:2.4.1.167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"sucrose 6F-alpha-galactotransferase activity","secondary_identifiers":["RHEA:10088"],"synonyms":[{"name":"UDP-galactose:sucrose 6F-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sucrose 6F-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sucrose 6fru-alpha-galactosyltransferase activity","type":"related"},{"name":"sucrose 6(F)-alpha-galactosyltransferase activity","type":"exact"},{"name":"sucrose 6F-alpha-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-sucrose 6F-alpha-galactosyltransferase activity","type":"related"}],"termid":"GO:0047235"}


id: PBO:0058860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8089","termid":"PBO:0058860"}


id: MONDO:0007115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"angioma serpiginosum","termid":"MONDO:0019803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioma serpiginosum, autosomal dominant","secondary_identifiers":["OMIM:106050","UMLS:C1970130","GARD:10189","MEDGEN:370186","MESH:C536365"],"synonyms":[{"name":"angioma serpiginosum, autosomal dominant","type":"exact"},{"name":"autosomal dominant angioma serpiginosum","type":"related"}],"termid":"MONDO:0007115","xrefs":{"Monarch":{"xref_id":"0007115"}}}


id: GO:0003026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by sensing the amount of stretch occurring in the aorta and responding to the input via central nervous system control.","definition_xrefs":["GOC:tb","GOC:mtg_cardio","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by aortic arch baroreceptor feedback","synonyms":[{"name":"aortic arch baroreceptor control of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0003026"}


id: GO:0009063
data:
  {"annotated_genes":["SJAG_03671","SJAG_01903","SJAG_04842","SJAG_03743","SJAG_02734","SJAG_03641","SJAG_04145","SJAG_04827","SJAG_00944","SJAG_00937","SJAG_02235","SJAG_02496","SJAG_03398","SJAG_00674","SJAG_02901","SJAG_03434","SJAG_00714","SJAG_00495","SJAG_03293","SJAG_03861","SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[72914,75635,73237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[72617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[82165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[80738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[89243,90235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"},{"annotations":[93546,81413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[79826,98275,75932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[70193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[80179,115174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[115911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"},{"annotations":[74843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"},{"annotations":[71993,79904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[73876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00674":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_00944":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02450":null,"SJAG_02496":null,"SJAG_02734":null,"SJAG_02901":null,"SJAG_03293":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03743":null,"SJAG_03861":null,"SJAG_04145":null,"SJAG_04827":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino acid breakdown","type":"exact"},{"name":"amino acid catabolism","type":"exact"},{"name":"amino acid degradation","type":"exact"},{"name":"cellular amino acid catabolic process","type":"exact"}],"termid":"GO:0009063","terms_by_termid":{"GO:0000949":null,"GO:0006533":null,"GO:0006538":null,"GO:0006567":null,"GO:0006574":null,"GO:0009450":null,"GO:0010121":null,"GO:0010133":null,"GO:0019450":null,"GO:0019464":null,"GO:0019478":null,"GO:0019544":null,"GO:0036088":null,"GO:0042853":null}}


id: MONDO:0015294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrogenic systemic fibrosis (NSF) is a rare systemic fibrosing condition observed in renally impaired patients and characterized by a hardening and thickening of the skin with fibrotic plaques or papules, pruritus, joint pain and stiffness, muscle weakness, limitation of range of motion, and yellowed eyes. It is generally associated with administration of gadolinium-based magnetic resonance imaging contrast agents (GBCA) in patients with kidney disease.","definition_xrefs":["Orphanet:137617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"nephrogenic systemic fibrosis","secondary_identifiers":["SCTID:424114000","MESH:D054989","MEDGEN:854737","icd11.foundation:1537082562","NORD:1498","UMLS:C3888044","NCIT:C84920","ICD9:588.89","MedDRA:10067467","GARD:9725"],"synonyms":[{"name":"NFD","type":"related"},{"name":"NSF","type":"related"},{"name":"nephrogenic fibrosing dermopathy","type":"exact"}],"termid":"MONDO:0015294","xrefs":{"Monarch":{"xref_id":"0015294"}}}


id: GO:0070179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-serine, the D-enantiomer of serine, i.e. (2R)-2-amino-3-hydroxypropanoic acid. D-serine is often formed by racemization of L-serine.","definition_xrefs":["CHEBI:16523","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid biosynthetic process","termid":"GO:0046437"},{"relation_name":"is_a","term_name":"D-serine metabolic process","termid":"GO:0070178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"D-serine biosynthetic process","synonyms":[{"name":"D-serine anabolism","type":"exact"},{"name":"D-serine biosynthesis","type":"exact"},{"name":"D-serine formation","type":"exact"},{"name":"D-serine synthesis","type":"exact"}],"termid":"GO:0070179"}


id: PBO:0029320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_at_centromere_outer_repeat","termid":"PBO:0029320"}


id: FYPO:0009015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which a larger than normal proportion of cells is viable when grown with glycerol as carbon source. In High Throughput Phenotyping this is typically assessed using phloxine as a dye.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population viability","termid":"FYPO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population viability on glycerol carbon source","synonyms":[{"name":"increased cell population viability during vegetative growth on glycerol carbon source","type":"exact"}],"termid":"FYPO:0009015"}


id: MONDO:0019886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 13q is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome 13, with variable phenotype principally characterized by intellectual disability, psychomotor delay, craniofacial dysmorphism (incl. microcephaly, bushy eyebrows, long curled eyelashes, hypotelorism, low-set ears, prominent nasal bridge, long philtrum, high palate, thin upper lip), short neck, polydactyly, and hemangiomas. Cardiac, urogenital and neural tube defects, as well as umbilical and inguinal hernias, seizures and hypotonia, have also been reported.","definition_xrefs":["Orphanet:96105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 13q trisomy","termid":"MONDO:0022177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 13q","secondary_identifiers":["GARD:19319","UMLS:C4706933","SCTID:764454003","MEDGEN:1639680"],"synonyms":[{"name":"distal duplication 13q","type":"exact"},{"name":"distal trisomy type 13q","type":"exact"},{"name":"telomeric duplication 13q","type":"exact"},{"name":"trisomy 13qter","type":"exact"}],"termid":"MONDO:0019886","xrefs":{"Monarch":{"xref_id":"0019886"}}}


id: PATO:0005024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed along the longitudinal or anterior-posterior axis.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longitudinal orientation","termid":"PATO:0005024"}


id: GO:0001165
data:
  {"annotated_genes":["SJAG_02747"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80970],"is_not":false,"summary":null,"term":"GO:0001165"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase I. RNA polymerase I elements are referred to either enhancers or upstream control element (UCE, or alternately referred to as the upstream element).","definition_xrefs":["PMID:8057832","PMID:14969726","GOC:txnOH","PMID:12865296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulatory region sequence-specific DNA binding","termid":"GO:0001163"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0000976","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase I cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0001166"],"synonyms":[{"name":"RNA polymerase I enhancer sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase I upstream control element sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase I upstream element sequence-specific DNA binding","type":"related"}],"termid":"GO:0001165","terms_by_termid":{"GO:0001165":null}}


id: PBO:0041039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 DNA repair associated","termid":"PBO:0041039"}


id: PBO:0066440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RETREG1 antisense RNA 1","termid":"PBO:0066440"}


id: PBO:0044998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH3 antisense RNA 1","termid":"PBO:0044998"}


id: MONDO:1012863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative brain disorder with mitochondrial dysfunction, amyloid-β accumulation, and lethal epilepsy that occurs in dogs due to a mutation in the PITRM1 gene.","definition_xrefs":["PMID:33835239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, dog","termid":"MONDO:1010411"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, mitochondrial dysfunction and neurodegeneration, PITRM1-related, dog","secondary_identifiers":["OMIA:002324-9615"],"termid":"MONDO:1012863","xrefs":{"Monarch":{"xref_id":"1012863"}}}


id: PBO:0063267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 13","termid":"PBO:0063267"}


id: PBO:0004149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF757 family protein","termid":"PBO:0004149"}


id: PBO:0086630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; mRNA is enriched in Scp160p-associated mRNPs; YIL161W is a non-essential gene","termid":"PBO:0086630"}


id: PBO:0078334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-6","termid":"PBO:0078334"}


id: FYPO:0004791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is greater than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased telomere-nuclear envelope distance during mitotic G2 phase","synonyms":[{"name":"increased distance between telomeres and nuclear envelope during mitotic G2 phase","type":"exact"},{"name":"increased telomere-nuclear envelope distance during G2 phase during mitotic cell cycle","type":"related"},{"name":"increased telomere-nuclear envelope distance during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004791"}


id: PBO:0050907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced with helicase C domain 1","termid":"PBO:0050907"}


id: PBO:0074658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 48","termid":"PBO:0074658"}


id: MONDO:0022400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal ciliopathy due to mutation in the RPGRIP gene (obsolete MONDO:0022400)","secondary_identifiers":["Orphanet:156174"],"termid":"MONDO:0022400","xrefs":{"Monarch":{"xref_id":"0022400"}}}


id: GO:0043716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-5-methylsulfanyl-3-oxopent-1-enyl phosphate + H2O = 1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one + phosphate.","definition_xrefs":["RHEA:14481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity","secondary_identifiers":["MetaCyc:R83-RXN","KEGG_REACTION:R07394","EC:3.1.3.87"],"synonyms":[{"name":"2-hydroxy-3-keto-5-methylthio-phosphopentene phosphatase activity","type":"exact"},{"name":"HK-MTPenyl-1-P phosphatase activity","type":"exact"}],"termid":"GO:0043716"}


id: GO:0071214
data:
  {"annotated_genes":["SJAG_03893","SJAG_05197","SJAG_01010","SJAG_02334","SJAG_03898","SJAG_00661","SJAG_04877","SJAG_01262","SJAG_00814","SJAG_04150","SJAG_00409","SJAG_02883","SJAG_05242","SJAG_03185","SJAG_02860","SJAG_00863","SJAG_04205","SJAG_04668","SJAG_00272","SJAG_02818","SJAG_04726","SJAG_02182","SJAG_00729","SJAG_02199","SJAG_04190","SJAG_00596","SJAG_02342","SJAG_00208","SJAG_02828","SJAG_01648","SJAG_02200","SJAG_01084","SJAG_02091","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[94242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[121534,121533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[91336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[97833,59316,104694,116445,108429,106440,118266,93727,119069,96211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[102060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[78650,111054,104728,97099],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[95503,66895,70493,60729,77436,107868,67849,114800,66002,68994,106135,89822,97880,71774,98995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (non-living) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"cellular response to environmental stimulus","termid":"GO:0104004"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00409":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01084":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02091":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03893":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04205":null,"SJAG_04668":null,"SJAG_04726":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to abiotic stimulus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:23873862":null},"synonyms":[{"name":"cellular response to abiotic stress","type":"narrow"}],"termid":"GO:0071214","terms_by_termid":{"GO:0009785":null,"GO:0070914":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null,"GO:0071483":null,"GO:1904161":null}}


id: PBO:0026667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_mononucleate_vegetative_cell","termid":"PBO:0026667"}


id: PBO:0089710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ctf18 RFC-like complex subunit Ctf18","termid":"PBO:0089710"}


id: FYPO:0006446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in the mitochondrion is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased pre-mRNA level","termid":"FYPO:0001908"},{"relation_name":"is_a","term_name":"increased mitochondrial RNA level","termid":"FYPO:0003424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased mitochondrial pre-mRNA level","synonyms":[{"name":"accumulation of mitochondrial pre-mRNA transcripts","type":"related"},{"name":"increased mitochondrial pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial pre-mRNA level during vegetative growth","type":"exact"},{"name":"increased mitochondrial pre-mRNA transcript level","type":"exact"},{"name":"increased mitochondrial re-mRNA accumulation","type":"related"},{"name":"increased pre-mRNA level in mitochondrion","type":"exact"}],"termid":"FYPO:0006446"}


id: PATO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular shape quality inhering in a bearer by virtue of the bearer's having a single angle in its length giving the bearer the form of the letter L.","definition_xrefs":["PATOC:JE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angular","termid":"PATO:0001977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-shaped","termid":"PATO:0002225"}


id: PBO:0116989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAL3ST2 antisense RNA 1","termid":"PBO:0116989"}


id: PBO:0075603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1","termid":"PBO:0075603"}


id: PBO:0077241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 2","termid":"PBO:0077241"}


id: PBO:0002691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triose phosphate transporter (predicted)","termid":"PBO:0002691"}


id: MONDO:0019575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypotrichosis simplex of the scalp (HSS) is characterized by diffuse progressive hair loss that is confined to the scalp.","definition_xrefs":["Orphanet:90368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis simplex of the scalp","secondary_identifiers":["GARD:16789","SCTID:717256009"],"synonyms":[{"name":"hereditary hypotrichosis simplex of the scalp","type":"exact"}],"termid":"MONDO:0019575","xrefs":{"Monarch":{"xref_id":"0019575"}}}


id: FYPO:0005643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased, and an increased amount of the protein is instead detected in the nucleus and at the spindle pole body.","definition_xrefs":["PMID:24478458","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body","synonyms":[{"name":"decreased protein localisation to cell tip, with protein mislocalized to nucleus and spindle pole body","type":"exact"},{"name":"decreased protein localization to cell end, with protein mislocalized to nucleus and spindle pole body","type":"exact"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and SPB","type":"exact"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body, during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body","type":"exact"}],"termid":"FYPO:0005643"}


id: PBO:0003365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein sap61","termid":"PBO:0003365"}


id: PBO:0078405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 1-1","termid":"PBO:0078405"}


id: PBO:0062999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 6","termid":"PBO:0062999"}


id: GO:0046882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of follicle-stimulating hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gonadotropin secretion","termid":"GO:0032277"},{"relation_name":"is_a","term_name":"regulation of follicle-stimulating hormone secretion","termid":"GO:0046880"},{"relation_name":"negatively_regulates","term_name":"follicle-stimulating hormone secretion","termid":"GO:0046884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of follicle-stimulating hormone secretion","synonyms":[{"name":"down regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"down-regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"downregulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"inhibition of follicle-stimulating hormone secretion","type":"narrow"},{"name":"negative regulation of follicle stimulating hormone secretion","type":"exact"}],"termid":"GO:0046882"}


id: PBO:0013090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1014 family protein, HMG-box clan member","termid":"PBO:0013090"}


id: MONDO:0002839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leather-bottle stomach (obsolete MONDO:0002839)","termid":"MONDO:0002839","xrefs":{"Monarch":{"xref_id":"0002839"}}}


id: GO:0034924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-3,4-phenanthrenedihydrodiol-4-carboxylate = 3,4-dihydroxyphenanthrene + H+ + 2 e- + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-3,4-phenanthrenedihydrodiol-4-carboxylate dehydrogenase activity (obsolete GO:0034924)","termid":"GO:0034924"}


id: FYPO:0001165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell that is exposed to anaerobic conditions fails to grow upon being returned to aerobic conditions, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable cell following anaerobic growth","synonyms":[{"name":"inviable following anaerobic vegetative growth","type":"exact"},{"name":"lethal; cell following anaerobic growth","type":"exact"}],"termid":"FYPO:0001165"}


id: MONDO:0017386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant mesenchymal neoplasm with skeletal muscle differentiation, occurring in adults and rarely in children. The tumor is characterized by the presence of bizarre round, spindle, and polygonal cells. Clinical presentation includes a rapidly enlarging painful mass usually of the lower extremities.","definition_xrefs":["NCIT:C4258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleomorphic rhabdomyosarcoma","secondary_identifiers":["MEDGEN:137770","DOID:3250","UMLS:C0334480","GARD:21165","ONCOTREE:PLRMS","Orphanet:293199","SCTID:404054005","ICD9:171.9"],"synonyms":[{"name":"anaplastic rhabdomyosarcoma","type":"exact"},{"name":"pleomorphic rhabdomyosarcoma","type":"exact"},{"name":"pleomorphic rhabdomyosarcoma, adult type","type":"exact"}],"termid":"MONDO:0017386","xrefs":{"Monarch":{"xref_id":"0017386"}}}


id: PBO:0001714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type","termid":"PBO:0001714"}


id: GO:0031455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycine betaine, N-trimethylglycine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine metabolic process","synonyms":[{"name":"N-trimethylglycine metabolic process","type":"exact"},{"name":"N-trimethylglycine metabolism","type":"exact"},{"name":"glycine betaine metabolism","type":"exact"}],"termid":"GO:0031455"}


id: PBO:0053162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low density lipoprotein receptor class A domain containing 4","termid":"PBO:0053162"}


id: PBO:0030585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_lysine_level","termid":"PBO:0030585"}


id: GO:0061620
data:
  {"annotated_genes":["SJAG_00605","SJAG_06622","SJAG_02107","SJAG_01310","SJAG_02945","SJAG_04334","SJAG_00461","SJAG_02009","SJAG_00839","SJAG_02135","SJAG_04192","SJAG_06621","SJAG_03828","SJAG_04495","SJAG_03373","SJAG_02369","SJAG_03903","SJAG_02796","SJAG_00027","SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74188,111344,107375,111345,105284,79614,111341,111342,111340,96380,105543,100139,99868,107745,111346,107374,107376,118333,111343,107746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, occurring through a glucose-6-phosphate intermediate, with the concomitant production of a small amount of ATP.","definition_xrefs":["ISBN:0201090910","GOC:dph","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006091","GO:0055086","GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"glycolytic process through glucose-6-phosphate","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061620","terms_by_termid":{"GO:0061621":null}}


id: PBO:0063956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2","termid":"PBO:0063956"}


id: PR:O13896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00468","PANTHER:PTHR11239:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit RPC10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.05","secondary_identifiers":["UniProtKB:O13896"],"synonyms":[{"name":"DNA-directed RNA polymerases III 12.5 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3K","type":"exact"}],"termid":"PR:O13896"}


id: MONDO:0043123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis","termid":"MONDO:0008779"},{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"massa casaer ceulemans syndrome","secondary_identifiers":["MESH:C536031","UMLS:C2931090","MEDGEN:418986","GARD:3407"],"synonyms":[{"name":"arthrogryposis multiplex congenita associated with lissencephaly","type":"related"}],"termid":"MONDO:0043123","xrefs":{"Monarch":{"xref_id":"0043123"}}}


id: PBO:0067742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 41","termid":"PBO:0067742"}


id: PBO:0027366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_actin_cortical_patches","termid":"PBO:0027366"}


id: GO:0008407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the chaeta are generated and organized. A chaeta is a sensory multicellular cuticular outgrowth of a specifically differentiated cell.","definition_xrefs":["FBbt:00005177","GOC:bf","GOC:dos","GOC:cjm","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"chaeta development","termid":"GO:0022416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chaeta morphogenesis","synonyms":[{"name":"bristle morphogenesis","type":"narrow"}],"termid":"GO:0008407"}


id: GO:0007057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle during meiosis I of a meiotic cell cycle in females. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in female meiosis","termid":"GO:0007056"},{"relation_name":"part_of","term_name":"female meiosis I","termid":"GO:0007144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0140013","GO:0008150","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"spindle assembly involved in female meiosis I","synonyms":[{"name":"female meiosis I spindle assembly","type":"related"}],"termid":"GO:0007057"}


id: GO:0010788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of cis-Golgi to rough ER transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COPI coating of Golgi vesicle","termid":"GO:0048205"},{"relation_name":"part_of","term_name":"vesicle targeting, cis-Golgi to rough endoplasmic reticulum","termid":"GO:0048206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"COPI coating of Golgi vesicle, cis-Golgi to rough ER","termid":"GO:0010788"}


id: PBO:0004357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription corepressor (predicted)","termid":"PBO:0004357"}


id: GO:0019646
data:
  {"annotated_genes":["SJAG_01763","SJAG_02744","SJAG_03490","SJAG_01490","SJAG_00260","SJAG_02504","SJAG_07007","SJAG_01190","SJAG_07006","SJAG_00080","SJAG_MIT04","SJAG_00976","SJAG_01671","SJAG_MIT03","SJAG_02646","SJAG_02398","SJAG_00755","SJAG_00601","SJAG_MIT20","SJAG_01355","SJAG_MIT13","SJAG_01077","SJAG_05629","SJAG_04152","SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117441,78216,80670,110225,116206,76008,121092,121042,62473,121064,73591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006123"},{"annotations":[114826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[91007,90633,118741,115165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006121"},{"annotations":[73930,115372,77533,121069,78215,75518,119676,77451,105981,62439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006122"}]},"cv_name":"biological_process","definition":"A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to oxygen to generate a transmembrane electrochemical gradient.","definition_xrefs":["GOC:ai","GOC:mtg_electron_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"},{"relation_name":"part_of","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00260":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02398":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_04152":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic electron transport chain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006138","GO:0006136","GO:0006137"],"synonyms":[{"name":"NADH-O2 electron transport","type":"narrow"},{"name":"succinate-O2 electron transport","type":"narrow"},{"name":"ubiquinone-8-O2 electron transport","type":"narrow"}],"termid":"GO:0019646","terms_by_termid":{"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null}}


id: GO:0044660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissemination of mature viral particles from a host cell via the formation by the virus of pores in its host cell membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral release from host cell by cytolysis","termid":"GO:0044659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral release via pore formation in host cell membrane","synonyms":[{"name":"cytolysis by virus via pore formation in host cell membrane","type":"related"},{"name":"viral exit by cytolysis via pore formation in host cell membrane","type":"exact"},{"name":"viral release by cytolysis via pore formation in host cell membrane","type":"exact"}],"termid":"GO:0044660"}


id: PBO:0064804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 1A pseudogene 1","termid":"PBO:0064804"}


id: PBO:0046509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERICH3 antisense RNA 1","termid":"PBO:0046509"}


id: PBO:0056382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 12","termid":"PBO:0056382"}


id: PBO:0030397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_pheromone","termid":"PBO:0030397"}


id: PBO:0036002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_sumoylation_during_vegetative_growth","termid":"PBO:0036002"}


id: GO:0048612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the post-embryonic phase, whose specific outcome is the progression of the ectodermal gut over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal digestive tract development","termid":"GO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic ectodermal digestive tract development","synonyms":[{"name":"post-embryonic ectodermal gut development","type":"related"}],"termid":"GO:0048612"}


id: PBO:0077623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15B","termid":"PBO:0077623"}


id: GO:0050180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phloretin = H+ + phloretate + phloroglucinol.","definition_xrefs":["EC:3.7.1.4","RHEA:23396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phloretin hydrolase activity","secondary_identifiers":["MetaCyc:PHLORETIN-HYDROLASE-RXN","KEGG_REACTION:R02901"],"synonyms":[{"name":"2',4,4',6'-tetrahydroxydehydrochalcone 1,3,5-trihydroxybenzenehydrolase activity","type":"related"},{"name":"lactase-phlorizin hydrolase","type":"broad"}],"termid":"GO:0050180"}


id: MONDO:0015033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cerebral hemorrhage with amyloidosis, Dutch type (HCHWA-D) is a form of HCHWA, a group of familial central nervous system disorders, characterized by severe cerebral amyloid angiopathy (CAA), hemorrhagic and non-hemorrhagic strokes and dementia.","definition_xrefs":["Orphanet:100006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy, APP-related","termid":"MONDO:0011583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"ABeta amyloidosis, dutch type","secondary_identifiers":["UMLS:C2931672","GARD:16929","ICD10EXP:E85.4+","ICD9:277.39","SCTID:56453003","ICD10EXP:I68.0*","MEDGEN:419468"],"synonyms":[{"name":"ABetaE22Q amyloidosis","type":"exact"},{"name":"HCHWA, Dutch type","type":"exact"},{"name":"HCHWA-D","type":"exact"},{"name":"cerebral amyloid angiopathy, APP-related, Dutch variant","type":"exact"},{"name":"hereditary cerebral haemorrhage with amyloidosis, Dutch type","type":"exact"},{"name":"hereditary cerebral hemorrhage with amyloidosis, Dutch type","type":"exact"}],"termid":"MONDO:0015033","xrefs":{"Monarch":{"xref_id":"0015033"}}}


id: SO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000292 repetitive_element (obsolete SO:0000292)","termid":"SO:0000292"}


id: SO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters; Positioned from +28 to +32 with respect to the TSS (+1). Experimental results suggest that the DPE acts in conjunction with the INR_motif to provide a binding site for TFIID in the absence of a TATA box to mediate transcription of TATA-less promoters. Consensus sequence (A|G)G(A|T)(C|T)(G|A|C).","definition_xrefs":["PMID:12537576","PMID:12515390","PMID:12651739","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPE_motif","synonyms":[{"name":"CRWMGCGWKCGCTTS","type":"narrow"},{"name":"DPE motif","type":"exact"},{"name":"downstream core promoter element","type":"exact"}],"termid":"SO:0000015"}


id: MONDO:0957531
data:
  {"annotated_genes":["SJAG_03267"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88169],"is_not":false,"summary":null,"term":"MONDO:0957531"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03267":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly and movement abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620445","MEDGEN:1841260","UMLS:C5830624"],"termid":"MONDO:0957531","terms_by_termid":{"MONDO:0957531":null},"xrefs":{"Monarch":{"xref_id":"0957531"}}}


id: GO:0033806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine + fluoroacetaldehyde = acetaldehyde + 4-fluoro-L-threonine.","definition_xrefs":["RHEA:11748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016744"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016744"],"is_obsolete":false,"name":"fluorothreonine transaldolase activity","secondary_identifiers":["EC:2.2.1.8"],"synonyms":[{"name":"fluoroacetaldehyde:L-threonine aldehydetransferase activity","type":"related"}],"termid":"GO:0033806"}


id: MONDO:0005140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm originating from the surface ovarian epithelium. It accounts for the greatest number of deaths from malignancies of the female genital tract and is the fifth leading cause of cancer fatalities in women. It is predominantly a disease of older white women of northern European extraction, but it is seen in all ages and ethnic groups. Adenocarcinomas constitute the vast majority of ovarian carcinomas. The pattern of metastatic spread in ovarian carcinoma is similar regardless of the microscopic type. The most common sites of involvement are the contralateral ovary, peritoneal cavity, para-aortic and pelvic lymph nodes, and liver. Lung and pleura are the most common sites of extra-abdominal spread. The primary form of therapy is surgical. The overall prognosis of ovarian carcinoma remains poor, a direct result of its rapid growth rate and the lack of early symptoms. --2002","definition_xrefs":["NCIT:C4908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian carcinoma","secondary_identifiers":["DOID:4001","MEDGEN:1648335","EFO:0001075","UMLS:C4721610"],"synonyms":[{"name":"carcinoma of ovary","type":"exact"},{"name":"carcinoma of the ovary","type":"exact"},{"name":"epithelial ovarian cancer","type":"exact"},{"name":"ovarian cancer","type":"broad"},{"name":"ovarian carcinoma","type":"exact"},{"name":"ovarian epithelial cancer","type":"broad"},{"name":"ovary carcinoma","type":"exact"}],"termid":"MONDO:0005140","xrefs":{"Monarch":{"xref_id":"0005140"}}}


id: PBO:0057961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3682","termid":"PBO:0057961"}


id: GO:0061083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the rate, frequency, or extent of protein refolding. Protein refolding is the process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein folding","termid":"GO:1903332"},{"relation_name":"regulates","term_name":"protein refolding","termid":"GO:0042026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006457"],"is_obsolete":false,"name":"regulation of protein refolding","termid":"GO:0061083"}


id: GO:0052522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of phagocytosis in other organism involved in symbiotic interaction (obsolete GO:0052522)","synonyms":[{"name":"activation by organism of phagocytosis in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"stimulation by organism of phagocytosis in other organism during symbiotic interaction","type":"narrow"},{"name":"up regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"up-regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"upregulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052522"}


id: GO:0140979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nucleotides within a cell.","definition_xrefs":["PMID:34880500","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nucleotide homeostasis","termid":"GO:0140979"}


id: MONDO:0012199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any posterior polymorphous corneal dystrophy in which the cause of the disease is a mutation in the COL8A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior polymorphous corneal dystrophy","termid":"MONDO:0020364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior polymorphous corneal dystrophy 2","secondary_identifiers":["GARD:18213","MESH:C565176","OMIM:609140","UMLS:C1852795","MEDGEN:377757","DOID:0110856"],"synonyms":[{"name":"COL8A2 posterior polymorphous corneal dystrophy","type":"exact"},{"name":"PPCD2","type":"exact"},{"name":"Ppcd2","type":"exact"},{"name":"corneal dystrophy, POSTERIOR polymorphous, 2","type":"related"},{"name":"corneal dystrophy, posterior polymorphous 2","type":"exact"},{"name":"corneal dystrophy, posterior polymorphous, type 2","type":"exact"},{"name":"posterior polymorphous corneal dystrophy caused by mutation in COL8A2","type":"exact"},{"name":"posterior polymorphous corneal dystrophy type 2","type":"exact"}],"termid":"MONDO:0012199","xrefs":{"Monarch":{"xref_id":"0012199"}}}


id: MONDO:0017283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"DeSanto-Shinawi syndrome due to WAC point mutation","termid":"MONDO:0014741"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 10","termid":"MONDO:0016892"},{"relation_name":"is_a","term_name":"DeSanto-Shinawi syndrome","termid":"MONDO:0018760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DeSanto-Shinawi Syndrome due to 10p11.21p12.31 microdeletion","secondary_identifiers":["GARD:17311","MEDGEN:1681325","UMLS:C5190804","Orphanet:284169"],"synonyms":[{"name":"10p12p11 microdeletion syndrome","type":"exact"},{"name":"Del(10)(p11.21p12.31)","type":"exact"},{"name":"deletion 10p11.21p12.31","type":"exact"},{"name":"facial dysmorphism-developmental delay-behavioral abnormalities syndrome due to 10p11.21p12.31 microdeletion","type":"exact"},{"name":"monosomy 10p11.21p12.31","type":"exact"}],"termid":"MONDO:0017283","xrefs":{"Monarch":{"xref_id":"0017283"}}}


id: MONDO:0015840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complete septate uterus is a rare, non-syndromic uterovaginal malformation characterized by a uterus that has a longitudinal septum which elongates from the uterine fundus to the internal or external cervical os. Most often women are asymptomatic, however dysmenorrhoea, unilateral obstruction, and endometriosis could be observed. Unlike urinary tract abnormalities, which are very rarely associated, poor reproductive outcome is frequent.","definition_xrefs":["Orphanet:180126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septate uterus","termid":"MONDO:0015839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complete septate uterus","secondary_identifiers":["MEDGEN:1672501","UMLS:C2957116","GARD:20181"],"synonyms":[{"name":"total septate uterus","type":"exact"}],"termid":"MONDO:0015840","xrefs":{"Monarch":{"xref_id":"0015840"}}}


id: PBO:0087318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methylmethionine-homocysteine methyltransferase; functions along with Sam4p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio","termid":"PBO:0087318"}


id: MONDO:0020040
data:
  {"annotated_genes":["SJAG_04337","SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009916"},{"annotations":[88024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010814"}]},"cv_name":"mondo","definition":"Differences of sex development in individuals with 46,XY karyotype.","definition_xrefs":["NCIT:C127171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of sexual differentiation","termid":"MONDO:0002145"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00630":null,"SJAG_04337":null},"genotype_count":0,"is_obsolete":false,"name":"46,XY disorder of sex development","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:8234004","UMLS:C2751824","NANDO:2200393","MEDGEN:414114","GARD:8538","MESH:D058490","Orphanet:98085"],"synonyms":[{"name":"46, XY DSD","type":"related"},{"name":"46, XY disorders of sexual development","type":"related"},{"name":"46, XY female","type":"related"},{"name":"46,XY DSD","type":"exact"},{"name":"46,XY differences of Sex development","type":"exact"},{"name":"46,XY disorders of Sex development","type":"exact"},{"name":"XY female","type":"related"}],"termid":"MONDO:0020040","terms_by_termid":{"MONDO:0009916":null,"MONDO:0010814":null},"xrefs":{"Monarch":{"xref_id":"0020040"}}}


id: PBO:0064472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 3, accessory subunit","termid":"PBO:0064472"}


id: PBO:0054992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2406","termid":"PBO:0054992"}


id: MONDO:0004194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic disorder that usually affects postmenopausal women. It is characterized by the leuteinization of ovarian stromal cells. The ovaries are bilaterally involved and enlarged. When it affects women in reproductive age, it causes virilization, high blood pressure, and increased insulin levels.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian stromal hyperthecosis","secondary_identifiers":["UMLS:C1518743","NCIT:C40446","MEDGEN:309519","DOID:7347"],"termid":"MONDO:0004194","xrefs":{"Monarch":{"xref_id":"0004194"}}}


id: MONDO:0100252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial tumoral calcinosis","termid":"MONDO:0018891"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"tumoral calcinosis, hyperphosphatemic, familial, 1","secondary_identifiers":["UMLS:C4692564","GARD:15146","MEDGEN:1642611","OMIM:211900"],"synonyms":[{"name":"HFTC","type":"broad"},{"name":"HFTC1","type":"exact"},{"name":"Morbus Teutschlaender","type":"exact"},{"name":"Teutschlaender disease, familial","type":"exact"},{"name":"calcinosis, tumoral, with hyperphosphatemia","type":"exact"},{"name":"hyperostosis-hyperphosphatemia syndrome","type":"exact"},{"name":"tumoral calcinosis, HYPERPHOSPHATEMIC, familial, 1","type":"exact"},{"name":"tumoral calcinosis, Hyperphosphatemic, familial, 1","type":"exact"},{"name":"tumoral calcinosis, hyperphosphatemic, familial","type":"exact"},{"name":"tumoral calcinosis, hyperphosphatemic, familial, 1","type":"exact"},{"name":"tumoral calcinosis, primary Hyperphosphatemic","type":"exact"}],"termid":"MONDO:0100252","xrefs":{"Monarch":{"xref_id":"0100252"}}}


id: PBO:0057485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 603","termid":"PBO:0057485"}


id: GO:0042751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism enters and maintains a period of dormancy, similar to hibernation, but that occurs during the summer. It insulates against heat to prevent the harmful effects of the season.","definition_xrefs":["PMID:12443930","Wikipedia:Estivation","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"estivation","synonyms":[{"name":"aestivation","type":"exact"}],"termid":"GO:0042751"}


id: GO:0048532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the configuration of the constituent parts of an anatomical structure. This process pertains to the physical shaping of a rudimentary structure. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure arrangement","synonyms":[{"name":"anatomical structure organization","type":"broad"},{"name":"anatomical structure structural organization","type":"exact"},{"name":"organization of an anatomical structure","type":"exact"},{"name":"structural organization","type":"exact"}],"termid":"GO:0048532"}


id: GO:0099589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine serotonin and transmitting a signal across a membrane by activating some effector activity. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"serotonin receptor activity","termid":"GO:0099589"}


id: PBO:0071324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 8","termid":"PBO:0071324"}


id: FYPO:0001549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell differs from normal during a cellular response to hypoxia. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"altered protein level during cellular response to hypoxia","synonyms":[{"name":"abnormal protein level during cellular response to hypoxia","type":"exact"},{"name":"altered cellular protein level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"altered protein level during cellular response to hypoxia during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001549"}


id: PBO:0005006
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated Methyltransferase complex subunit","termid":"PBO:0005006"}


id: GO:0044659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissemination of mature viral particles from a host cell by the rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["GOC:jl","PMID:26728778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated cytolysis of host cell","termid":"GO:0001897"},{"relation_name":"is_a","term_name":"viral release from host cell","termid":"GO:0019076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral release from host cell by cytolysis","secondary_identifiers":["GO:0046756","VZ:1077","GO:0019077"],"synonyms":[{"name":"cytolysis by virus of host cell","type":"related"},{"name":"lytic viral life cycle","type":"related"},{"name":"lytic viral release","type":"exact"},{"name":"viral exit from host cell by cytolysis","type":"exact"},{"name":"viral release by cell lysis","type":"exact"},{"name":"viral release by host cell lysis","type":"exact"}],"termid":"GO:0044659"}


id: PBO:0041666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK2 associated cullin domain 1","termid":"PBO:0041666"}


id: PBO:0060037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 25","termid":"PBO:0060037"}


id: PBO:0066966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 268","termid":"PBO:0066966"}


id: PBO:0116410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 6","termid":"PBO:0116410"}


id: GO:0070697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an activin receptor.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase binding","termid":"GO:0070696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"activin receptor binding","termid":"GO:0070697"}


id: MONDO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Wolffian duct adenoma (obsolete MONDO:0002364)","termid":"MONDO:0002364","xrefs":{"Monarch":{"xref_id":"0002364"}}}


id: PBO:0072853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 3","termid":"PBO:0072853"}


id: MONDO:0100301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing capillary infantile hemangioma.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma, capillary infantile, susceptibility to","secondary_identifiers":["MEDGEN:864857","UMLS:C4016420"],"termid":"MONDO:0100301","xrefs":{"Monarch":{"xref_id":"0100301"}}}


id: PBO:0056450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3 pseudogene 2","termid":"PBO:0056450"}


id: GO:0046836
data:
  {"annotated_genes":["SJAG_03774","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78825,96271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"}]},"cv_name":"biological_process","definition":"The directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02897":null,"SJAG_03774":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glycolipid transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0046836","terms_by_termid":{"GO:0034203":null}}


id: PBO:0036333
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by A. thaliana COQ9","termid":"PBO:0036333"}


id: PBO:0046198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A3 family member B, pseudogene","termid":"PBO:0046198"}


id: PBO:0034486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_lipid_metabolism_gene_mRNA_during_cellular_response_to_hypoxia","termid":"PBO:0034486"}


id: GO:0005849
data:
  {"annotated_genes":["SJAG_03500","SJAG_02865","SJAG_01412","SJAG_03728","SJAG_02037","SJAG_02720","SJAG_03233","SJAG_00961","SJAG_04587","SJAG_03594","SJAG_03853","SJAG_03624","SJAG_00527","SJAG_01599","SJAG_03126","SJAG_01791","SJAG_04022","SJAG_01175","SJAG_03226"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72807,78592,113917,81144,69681,120219,79323,73050,74865,95281,74360,71825,71727,72093,113257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005847"},{"annotations":[95303,111768,113532,100009,101503,100966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005848"}]},"cv_name":"cellular_component","definition":"Any macromolecular complex involved in cleavage or polyadenylation of mRNA molecules.","definition_xrefs":["PMID:10357856","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03728":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04587":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"mRNA cleavage factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0005849","terms_by_termid":{"GO:0005847":null,"GO:0005848":null}}


id: MONDO:1011958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laron dwarfism, non-human animal","secondary_identifiers":["OMIA:001323"],"termid":"MONDO:1011958","xrefs":{"Monarch":{"xref_id":"1011958"}}}


id: PBO:0053728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 942","termid":"PBO:0053728"}


id: GO:0050081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + maltose 6'-phosphate = D-glucose + D-glucose 6-phosphate.","definition_xrefs":["EC:3.2.1.122","MetaCyc:MALTOSE-6-PHOSPHATE-GLUCOSIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"maltose-6'-phosphate glucosidase activity","secondary_identifiers":["RHEA:20421"],"synonyms":[{"name":"maltose-6'-phosphate 6-phosphoglucohydrolase activity","type":"related"},{"name":"phospho-alpha-glucosidase activity","type":"related"}],"termid":"GO:0050081"}


id: GO:0060076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell increases the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"excitatory synapse","secondary_identifiers":["Wikipedia:Excitatory_synapse"],"termid":"GO:0060076"}


id: PBO:0036553
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYRosine requiring","termid":"PBO:0036553"}


id: GO:0052869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoate + O2 + reduced [NADPH--hemoprotein reductase] = 20-hydroxy-(5Z,8Z,11Z,14Z)-eicosatetraenoate + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. (5Z,8Z,11Z,14Z)-icosatetraenoic acid is also known as arachidonic acid is also and 20-hydroxy-(5Z,8Z,11Z,14Z)-eicosatetraenoate as 20-HETE.","definition_xrefs":["RHEA:39755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"arachidonate omega-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07041","MetaCyc:RXN-19677"],"synonyms":[{"name":"arachidonic acid hydroxylase activity","type":"broad"},{"name":"arachidonic acid omega-hydroxylase activity","type":"exact"},{"name":"arachidonic acid:oxygen 1-oxidoreductase activity","type":"exact"}],"termid":"GO:0052869"}


id: PR:Q9UT43
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dnf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-transporting ATPase C821.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.13c","synonyms":[{"name":"Spom972h-dnf1","type":"exact"}],"termid":"PR:Q9UT43"}


id: MONDO:0000924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compensatory emphysema","secondary_identifiers":["icd11.foundation:318427535","SCTID:33325001","UMLS:C0155918","DOID:10031","ICD9:518.2","MEDGEN:510136","ICD10CM:J98.3"],"termid":"MONDO:0000924","xrefs":{"Monarch":{"xref_id":"0000924"}}}


id: GO:0030849
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any chromosome other than a sex chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"autosome","secondary_identifiers":["Wikipedia:Autosome"],"termid":"GO:0030849"}


id: MONDO:0007951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"masticatory muscles, hypertrophy of","secondary_identifiers":["MEDGEN:322570","OMIM:154850","MESH:C563600","UMLS:C1835093","SCTID:699649006"],"synonyms":[{"name":"masseter muscle Hypertrophy","type":"related"},{"name":"masticatory muscles, hypertrophy of","type":"exact"}],"termid":"MONDO:0007951","xrefs":{"Monarch":{"xref_id":"0007951"}}}


id: PBO:0058048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4269","termid":"PBO:0058048"}


id: PBO:0090219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBC1A4.04 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0090219"}


id: FYPO:0002960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during the meiotic cell cycle, and that contain determinant of selective removal (DSR) sequences, measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah","PMID:23980030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased level of DSR-containing meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased DSR-containing meiotic gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of DSR-containing meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of DSR-containing meiotic cell cycle gene mRNA during vegetative growth","type":"related"},{"name":"increased level of DSR-containing meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of DSR-containing meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of DSR-containing meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of DSR-containing meiotic nuclear division gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0002960"}


id: PBO:0055392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2822","termid":"PBO:0055392"}


id: PBO:0065730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 2B","termid":"PBO:0065730"}


id: GO:0031456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine betaine, N-trimethylglycine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"glycine betaine metabolic process","termid":"GO:0031455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine biosynthetic process","synonyms":[{"name":"N-trimethylglycine biosynthesis","type":"exact"},{"name":"N-trimethylglycine biosynthetic process","type":"exact"},{"name":"glycine betaine anabolism","type":"exact"},{"name":"glycine betaine biosynthesis","type":"exact"},{"name":"glycine betaine formation","type":"exact"},{"name":"glycine betaine synthesis","type":"exact"}],"termid":"GO:0031456"}


id: GO:1900787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of naphtho-gamma-pyrone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone metabolic process","termid":"GO:1900785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"naphtho-gamma-pyrone biosynthetic process","synonyms":[{"name":"naphtho-gamma-pyrone anabolism","type":"exact"},{"name":"naphtho-gamma-pyrone biosynthesis","type":"exact"},{"name":"naphtho-gamma-pyrone formation","type":"exact"},{"name":"naphtho-gamma-pyrone synthesis","type":"exact"},{"name":"naphtho-gamma-pyrones anabolism","type":"related"},{"name":"naphtho-gamma-pyrones biosynthesis","type":"related"},{"name":"naphtho-gamma-pyrones biosynthetic process","type":"related"},{"name":"naphtho-gamma-pyrones formation","type":"related"},{"name":"naphtho-gamma-pyrones synthesis","type":"related"}],"termid":"GO:1900787"}


id: GO:0019091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lrRNA, large subunit ribosomal ribonucleic acid, is transported from the mitochondrial matrix into the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial rRNA export from mitochondrion","termid":"GO:0019090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"mitochondrial lrRNA export from mitochondrion","synonyms":[{"name":"export of mitochondrial lrRNA","type":"broad"},{"name":"mitochondrial lrRNA export","type":"exact"},{"name":"mitochondrial lrRNA export from mitochondria","type":"exact"},{"name":"mitochondrial lrRNA export out of mitochondrion","type":"exact"},{"name":"mitochondrial lrRNA transport from mitochondrion","type":"exact"},{"name":"mitochondrial lrRNA, mitochondrial export","type":"exact"}],"termid":"GO:0019091"}


id: GO:0035754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:BHF","CL:0000236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell chemotaxis","termid":"GO:0035754"}


id: PBO:0082554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central plaque component of spindle pole body (SPB); involved in SPB duplication, may facilitate attachment of the SPB to the nuclear membrane","termid":"PBO:0082554"}


id: PBO:0052958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynurenine aminotransferase 1","termid":"PBO:0052958"}


id: FYPO:0005402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the single-stranded telomeric 3' overhang is longer than normal.","definition_xrefs":["PomBase:mah","PMID:12861005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during vegetative growth","termid":"FYPO:0002254"},{"relation_name":"is_a","term_name":"abnormal telomere structure","termid":"FYPO:0006510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"increased telomeric 3' overhang length during vegetative growth","synonyms":[{"name":"increased single-stranded telomeric 3' overhang length during vegetative growth","type":"exact"},{"name":"increased telomere 3' overhang length during vegetative growth","type":"exact"},{"name":"increased telomeric 3' overhang length during mitotic cell cycle","type":"related"},{"name":"increased telomeric G-strand overhang length during vegetative growth","type":"exact"}],"termid":"FYPO:0005402"}


id: PBO:0041129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTBD9 antisense RNA 1","termid":"PBO:0041129"}


id: FYPO:0004598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin during mitotic G2 phase","synonyms":[{"name":"increased protein localisation to chromatin during mitotic G2 phase","type":"exact"},{"name":"increased protein localization to chromatin during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004598"}


id: PBO:0065162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prion protein","termid":"PBO:0065162"}


id: GO:0050479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-sn-glycerol + O2 + (tetrahydrobiopterin/tetrahydropteridine) = 1-hydroxyalkyl-sn-glycerol + H2O + (dihydrobiopterin/dihydropteridine).","definition_xrefs":["EC:1.14.16.5","MetaCyc:GLYCERYL-ETHER-MONOOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glyceryl-ether monooxygenase activity","secondary_identifiers":["RHEA:36255","Reactome:R-HSA-5696119"],"synonyms":[{"name":"1-alkyl-sn-glycerol,tetrahydrobiopterin:oxygen oxidoreductase activity","type":"related"},{"name":"O-alkylglycerol monooxygenase activity","type":"related"},{"name":"alkylglycerol monooxygenase activity","type":"related"},{"name":"glyceryl ether oxygenase activity","type":"related"},{"name":"glyceryl etherase activity","type":"related"},{"name":"glyceryl-ether cleaving enzyme activity","type":"related"}],"termid":"GO:0050479"}


id: MONDO:0018638
data:
  {"annotated_genes":["SJAG_04335"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013782"}]},"cv_name":"mondo","definition":"An inherited or acquired disorder of electrolyte metabolism, characterized by the inability of the renal tubules to respond to aldosterone. It is manifested by hyperkalemic metabolic acidosis, urinary salt wasting, normal or increased aldosterone secretion and normal glomerular filtration rate.","definition_xrefs":["NCIT:C85034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D011546","SCTID:77098009","ICD9:255.8","UMLS:C0033805","MEDGEN:18721","Orphanet:444916","DOID:4479","NANDO:2100133","NANDO:2200367","GARD:21861"],"termid":"MONDO:0018638","terms_by_termid":{"MONDO:0013782":null},"xrefs":{"Monarch":{"xref_id":"0018638"}}}


id: SO:0001106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of five consecutive residues and two H-bonds in which: Residue(i) is Aspartate or Asparagine (Asx), side-chain O of residue(i) is H-bonded to the main-chain NH of residue(i+2) or (i+3), main-chain CO of residue(i) is H-bonded to the main-chain NH of residue(i+3) or (i+4).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_motif","secondary_identifiers":["BS:00202"],"synonyms":[{"name":"asx motif","type":"exact"}],"termid":"SO:0001106"}


id: PBO:0017461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_pathogen","termid":"PBO:0017461"}


id: PBO:0028093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytochrome-c_oxidase_activity","termid":"PBO:0028093"}


id: MONDO:0020099
data:
  {"annotated_genes":["SJAG_00319","SJAG_01417","SJAG_03961","SJAG_01704","SJAG_04473","SJAG_02288","SJAG_02457","SJAG_00088","SJAG_04984","SJAG_00066","SJAG_01615"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030436"},{"annotations":[87438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008422"},{"annotations":[88717,88716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014487"},{"annotations":[88704,88705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024553"},{"annotations":[89056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013307"},{"annotations":[88191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008785"},{"annotations":[87616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014804"},{"annotations":[88532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020721"},{"annotations":[87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"sideroblastic anemia","termid":"MONDO:0015194"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00088":null,"SJAG_00319":null,"SJAG_01417":null,"SJAG_01615":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02457":null,"SJAG_03961":null,"SJAG_04473":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"inherited sideroblastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:300751","UMLS:C0221018","icd11.foundation:789053868","Orphanet:98362","MEDGEN:65119","GARD:19453","NANDO:1200892"],"synonyms":[{"name":"constitutional sideroblastic anaemia","type":"exact"},{"name":"constitutional sideroblastic anemia","type":"exact"}],"termid":"MONDO:0020099","terms_by_termid":{"MONDO:0008422":null,"MONDO:0008785":null,"MONDO:0010524":null,"MONDO:0013307":null,"MONDO:0014487":null,"MONDO:0014804":null,"MONDO:0020721":null,"MONDO:0024553":null,"MONDO:0030436":null},"xrefs":{"Monarch":{"xref_id":"0020099"}}}


id: PBO:0011460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trancriptional repressor protein BolA domain (predicted)","termid":"PBO:0011460"}


id: PBO:0071715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 13","termid":"PBO:0071715"}


id: MONDO:0012041
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87582],"is_not":false,"summary":null,"term":"MONDO:0012041"}]},"cv_name":"mondo","definition":"An autosomal recessive hereditary neoplastic syndrome caused by mutations in the MUTYH gene on chromosome 1p34.1. It is characterized by the presence of multiple colorectal polyps that may progress to carcinoma. Development of gastric and small intestinal polyps may also occur.","definition_xrefs":["NCIT:C96520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"attenuated familial adenomatous polyposis","termid":"MONDO:0016362"},{"relation_name":"is_a","term_name":"classic familial adenomatous polyposis","termid":"MONDO:0021055"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"familial adenomatous polyposis 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080410","Orphanet:247798","OMIM:608456","GARD:10805","MESH:C563924","MEDGEN:474474","UMLS:C3272841"],"synonyms":[{"name":"FAP2","type":"exact"},{"name":"MAP","type":"exact"},{"name":"MAP syndrome","type":"related"},{"name":"MUTYH-associated polyposis","type":"exact"},{"name":"MUTYH-related AFAP","type":"exact"},{"name":"MUTYH-related attenuated FAP","type":"exact"},{"name":"MUTYH-related attenuated familial adenomatous polyposis","type":"exact"},{"name":"MUTYH-related attenuated familial polyposis coli","type":"exact"},{"name":"MYH-associated polyposis","type":"related"},{"name":"adenomas, multiple colorectal, autosomal recessive","type":"exact"},{"name":"autosomal recessive familial adenomatous polyposis","type":"related"},{"name":"autosomal recessive multiple colorectal adenomas","type":"related"},{"name":"colorectal adenomatous polyposis, autosomal recessive","type":"exact"},{"name":"familial adenomatous polyposis 2","type":"exact"},{"name":"familial adenomatous polyposis, 2","type":"exact"},{"name":"familial adenomatous polyposis, type 2","type":"exact"}],"termid":"MONDO:0012041","terms_by_termid":{"MONDO:0012041":null},"xrefs":{"Monarch":{"xref_id":"0012041"}}}


id: PBO:0077574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA element modulatory factor 1 pseudogene 1","termid":"PBO:0077574"}


id: MOD:00577
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:7744761","Unimod:254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +26","synonyms":[{"name":"Acetaldehyde +26","type":"related"},{"name":"Delta:H(2)C(2)","type":"related"}],"termid":"MOD:00577"}


id: MONDO:0850282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asthma that is characterized by the development of persistent airway inflammation and recurrent attacks of breathlessness and wheezing, which vary in severity and frequency.","definition_xrefs":["DOID:0080809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic asthma","secondary_identifiers":["UMLS:C0877430","MEDGEN:1843404"],"synonyms":[{"name":"adult-onset severe asthma","type":"narrow"},{"name":"persistent mild asthma","type":"narrow"},{"name":"persistent moderate asthma","type":"narrow"},{"name":"persistent severe asthma","type":"narrow"}],"termid":"MONDO:0850282","xrefs":{"Monarch":{"xref_id":"0850282"}}}


id: PBO:0044924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase alpha","termid":"PBO:0044924"}


id: GO:0052021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of ethylene in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of ethylene levels in host (obsolete GO:0052021)","synonyms":[{"name":"modulation by organism of ethylene levels in other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052021"}


id: GO:0042682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a compound eye cone cell.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"regulates","term_name":"compound eye cone cell fate specification","termid":"GO:0042679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye cone cell fate specification","secondary_identifiers":["GO:0042681"],"termid":"GO:0042682"}


id: PBO:0025532
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-ketothiolase deficiency","termid":"PBO:0025532"}


id: MONDO:0007885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hip region disease that is characterized by uni- or bilateral avascular necrosis (AVN) of the femoral head in children. In a small percentage of cases, mutations in the COL2A1 gene were found to be responsible.","definition_xrefs":["GARD:0006874","Orphanet:2380"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete type 2 collagen-related bone disorder (obsolete MONDO:0019686)","termid":"MONDO:0019686"},{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"},{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"},{"relation_name":"is_a","term_name":"dysplasia of the proximal femoral epiphyses","termid":"MONDO:1030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Legg-Calve-Perthes disease","secondary_identifiers":["MEDGEN:730669","SCTID:15739006","UMLS:C1442965","GARD:6874","MedDRA:10034735","DOID:14415","NCIT:C34766","MESH:D007873","OMIM:150600"],"synonyms":[{"name":"Calve - Perthes' disease","type":"exact"},{"name":"LCPD","type":"related"},{"name":"Lcp","type":"related"},{"name":"Legg Calvé Perthes Disease","type":"exact"},{"name":"Legg-CALVE-Perthes disease","type":"exact"},{"name":"Legg-Calve-Perthes disease","type":"exact"},{"name":"Legg-Calve-Perthes symptom","type":"exact"},{"name":"Legg-Calve-Perthes syndrome","type":"exact"},{"name":"Legg-Calvé-Perthes disease","type":"exact"},{"name":"Legg-Perthes disease","type":"exact"},{"name":"Osteochondrosis of the capital femoral epiphysis","type":"exact"},{"name":"Perthe's disease","type":"exact"},{"name":"Perthes disease","type":"exact"},{"name":"Pseudocoxalgia","type":"exact"},{"name":"aseptic necrosis of the capital femoral epiphysis","type":"exact"},{"name":"coxa plana","type":"exact"},{"name":"juvenile osteochond-hip/pelvis","type":"exact"},{"name":"juvenile osteochondrosis of hip and pelvis","type":"exact"},{"name":"juvenile osteochondrosis of hip and/or pelvis","type":"exact"},{"name":"osteochondritis deformans","type":"related"},{"name":"osteochondritis of the capital femoral epiphysis","type":"exact"},{"name":"osteochondrosis of Legg-Calve-Perthes","type":"exact"},{"name":"pseudocoxalgia","type":"exact"}],"termid":"MONDO:0007885","xrefs":{"Monarch":{"xref_id":"0007885"}}}


id: PBO:0026631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_establishment_of_mitotic_sister_chromatid_cohesion","termid":"PBO:0026631"}


id: PBO:0061024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 7","termid":"PBO:0061024"}


id: MONDO:0018843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A embryonal carcinoma that involves the central nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"embryonal carcinoma","termid":"MONDO:0005440"},{"relation_name":"is_a","term_name":"central nervous system nongerminomatous germ cell tumor","termid":"MONDO:0020574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"embryonal carcinoma of the central nervous system","secondary_identifiers":["ONCOTREE:BEC","MEDGEN:272566","Orphanet:48736","NCIT:C7010","UMLS:C1333377","DOID:7232","GARD:18836"],"synonyms":[{"name":"central nervous system embryonal carcinoma","type":"exact"},{"name":"embryonal carcinoma","type":"related"},{"name":"embryonal carcinoma of CNS","type":"exact"},{"name":"embryonal carcinoma of the CNS","type":"exact"},{"name":"embryonal carcinoma of the central nervous system","type":"exact"}],"termid":"MONDO:0018843","xrefs":{"Monarch":{"xref_id":"0018843"}}}


id: PBO:0071562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 28","termid":"PBO:0071562"}


id: GO:0044032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of indole acetic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of indole acetic acid levels in host (obsolete GO:0044032)","synonyms":[{"name":"modulation by symbiont of IAA levels in host","type":"exact"},{"name":"modulation by symbiont of auxin levels in host","type":"broad"}],"termid":"GO:0044032"}


id: GO:0048006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen of endogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["PMID:15928680","GOC:add","PMID:15928678","PMID:10375559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous antigen","termid":"GO:0019883"},{"relation_name":"is_a","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation, endogenous lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, endogenous lipid antigen","type":"exact"},{"name":"endogenous lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048006"}


id: GO:0045937
data:
  {"annotated_genes":["SJAG_00685","SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"},{"annotations":[91516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving phosphates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"positively_regulates","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of phosphate metabolic process","type":"narrow"},{"name":"positive regulation of phosphate metabolism","type":"exact"},{"name":"stimulation of phosphate metabolic process","type":"narrow"},{"name":"up regulation of phosphate metabolic process","type":"exact"},{"name":"up-regulation of phosphate metabolic process","type":"exact"},{"name":"upregulation of phosphate metabolic process","type":"exact"}],"termid":"GO:0045937","terms_by_termid":{"GO:1902648":null,"GO:1905857":null}}


id: PBO:0056123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYSET pseudogene 1","termid":"PBO:0056123"}


id: PBO:0084711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane half-type ABC transporter; mediates export of peptides generated upon proteolysis of mitochondrial proteins; plays a role in the regulation of cellular resistance to oxidative stress","termid":"PBO:0084711"}


id: MONDO:0004587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary night blindness (obsolete MONDO:0004587)","termid":"MONDO:0004587","xrefs":{"Monarch":{"xref_id":"0004587"}}}


id: PBO:0069616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 893, pseudogene","termid":"PBO:0069616"}


id: GO:1904906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell-matrix adhesion via fibronectin.","definition_xrefs":["GO_REF:0000058","PMID:19460962","GOC:BHF","GOC:TermGenie","GOC:bc","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-matrix adhesion","termid":"GO:0001954"},{"relation_name":"is_a","term_name":"regulation of endothelial cell-matrix adhesion via fibronectin","termid":"GO:1904904"},{"relation_name":"positively_regulates","term_name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of endothelial cell-matrix adhesion via fibronectin","synonyms":[{"name":"activation of endothelial cell-matrix adhesion via fibronectin","type":"narrow"},{"name":"up regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"up-regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"upregulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"}],"termid":"GO:1904906"}


id: PBO:0061212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 4 like","termid":"PBO:0061212"}


id: PBO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by glucose","termid":"PBO:0005011"}


id: GO:0075001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an infection structure of the symbiont to its host via adhesion molecules, general stickiness etc., either directly or indirectly. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont infection structure to host","secondary_identifiers":["Reactome:R-HSA-9664407"],"synonyms":[{"name":"adhesion of symbiont infection structure to host during symbiotic interaction","type":"exact"},{"name":"attachment of symbiont infection structure to host","type":"exact"}],"termid":"GO:0075001"}


id: MONDO:0020344
data:
  {"annotated_genes":["SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012157"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"postsynaptic congenital myasthenic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15022","MEDGEN:199758","Orphanet:98913","UMLS:C0751883"],"synonyms":[{"name":"postsynaptic congenital myasthenic syndromes","type":"related"}],"termid":"MONDO:0020344","terms_by_termid":{"MONDO:0012157":null},"xrefs":{"Monarch":{"xref_id":"0020344"}}}


id: PATO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence quality inhering in a bearer by virtue of emitting light during exposure to radiation from an external source.","definition_xrefs":["web:www.thefreedictionary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescence","termid":"PATO:0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescent","termid":"PATO:0001290"}


id: PBO:0034280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_via_type_III_bouton_to","termid":"PBO:0034280"}


id: PBO:0004857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rad9 homolog, Rhp9","termid":"PBO:0004857"}


id: PBO:0076210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 20","termid":"PBO:0076210"}


id: FYPO:0007246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is abolished during anaphase of the second meiotic nuclear division.","definition_xrefs":["PMID:20980623","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to meiotic spindle pole body","termid":"FYPO:0003542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle pole body during anaphase II","synonyms":[{"name":"abolished protein localisation to meiotic spindle pole body during anaphase II","type":"exact"},{"name":"abolished protein localization to meiotic SPB during anaphase II","type":"exact"},{"name":"protein localization to meiotic spindle pole body abolished during anaphase II","type":"exact"}],"termid":"FYPO:0007246"}


id: PR:O13696
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD] subunit 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.03","secondary_identifiers":["UniProtKB:O13696"],"synonyms":[{"name":"NAD(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"SPAC11G7.03","type":"related"},{"name":"Spom972h-IDH3G","type":"exact"},{"name":"isocitric dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13696"}


id: PBO:0004572
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PiF1 Helicase homolog","termid":"PBO:0004572"}


id: PBO:0003478
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human MRRF","termid":"PBO:0003478"}


id: GO:0052749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose 6-phosphate + coenzyme F420 + H+ = 6-O-phosphono-D-glucono-1,5-lactone + reduced coenzyme F420.","definition_xrefs":["GOC:mengo_curators","RHEA:27294","EC:1.1.98.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glucose-6-phosphate dehydrogenase (coenzyme F420) activity","secondary_identifiers":["KEGG_REACTION:R09550","MetaCyc:RXN-11283"],"synonyms":[{"name":"D-glucose-6-phosphate:F420 1-oxidoreductase activity","type":"exact"},{"name":"F420-dependent glucose-6-phosphate dehydrogenase activity","type":"related"},{"name":"coenzyme F420-dependent glucose-6-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0052749"}


id: PBO:0067512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 653, pseudogene","termid":"PBO:0067512"}


id: PBO:0087269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase; phosphorylates several aminophospholipid translocase family members, regulating phospholipid translocation and membrane asymmetry; phosphorylates and inhibits the protein kinase Akl1p, stimulating endocytosis; phosphorylates and inhibits upstream inhibitory kinase Ypk1p; localizes to the cytoplasm, early endosome/TGN, the plasma membrane and the shmoo tip; redundant role with KIN82 in the mating pheromone response; activity stimulated by Gin4p kinase and sphingolipid MIPC","termid":"PBO:0087269"}


id: PBO:0072081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 11","termid":"PBO:0072081"}


id: MONDO:0008760
data:
  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88832],"is_not":false,"summary":null,"term":"MONDO:0008760"}]},"cv_name":"mondo","definition":"Beta-ketothiolase (T2) deficiency is a rare organic aciduria affecting ketone body metabolism and the catabolism of isoleucine and characterized by intermittent ketoacidotic episodes associated with vomiting, dyspnea, tachypnoea, hypotonia, lethargy and coma, with an onset during infancy or toddlerhood and usually ceasing by adolescence.","definition_xrefs":["Orphanet:134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of ketolysis","termid":"MONDO:0019229"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002525","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"beta-ketothiolase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535434","MEDGEN:280689","GARD:872","NANDO:2200493","NANDO:1200987","NCIT:C98841","UMLS:C1536500","DOID:14723","OMIM:203750"],"synonyms":[{"name":"2-Methyl-3-hydroxybutyric acidemia","type":"related"},{"name":"2-methyl-3-hydroxybutyricacidemia","type":"exact"},{"name":"3-Ktd deficiency","type":"related"},{"name":"3-ketothiolase deficiency","type":"exact"},{"name":"3-oxothiolase deficiency","type":"exact"},{"name":"ALPHA-methylacetoacetic aciduria","type":"related"},{"name":"Alpha methylacetoacetic aciduria","type":"exact"},{"name":"Alpha-methyl-acetoacetyl-CoA thiolase deficiency","type":"exact"},{"name":"BKT","type":"exact"},{"name":"Beta ketothiolase deficiency","type":"related"},{"name":"Mat deficiency","type":"related"},{"name":"T2 deficiency","type":"exact"},{"name":"alpha-methylacetoaceticaciduria","type":"exact"},{"name":"beta-ketothiolase deficiency","type":"exact"},{"name":"mitochondrial acetoacetyl-CoA thiolase deficiency","type":"exact"},{"name":"mitochondrial acetoacetyl-Coa thiolase deficiency","type":"related"},{"name":"mitochondrial acetoacetyl-coenzyme A thiolase deficiency","type":"exact"},{"name":"peroxisomal thiolase deficiency","type":"exact"}],"termid":"MONDO:0008760","terms_by_termid":{"MONDO:0008760":null},"xrefs":{"Monarch":{"xref_id":"0008760"}}}


id: FYPO:0000256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mutations occur at a higher frequency than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mutation rate","termid":"FYPO:0007431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mutator","synonyms":[{"name":"increased mutation rate","type":"exact"},{"name":"mutator during mitotic cell cycle","type":"related"},{"name":"mutator during vegetative growth","type":"exact"}],"termid":"FYPO:0000256"}


id: GO:0060949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to a cardiac vascular smooth muscle cell fate and its capacity to differentiate into a cardiac vascular smooth muscle cell.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle cell fate commitment","termid":"GO:0097081"},{"relation_name":"part_of","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac vascular smooth muscle cell fate commitment","synonyms":[{"name":"heart vascular smooth muscle cell fate commitment","type":"exact"}],"termid":"GO:0060949"}


id: PBO:0027129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_carbohydrate_metabolism_gene_mRNA_during_meiotic_cell_cycle","termid":"PBO:0027129"}


id: PBO:0039130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacyl tRNA synthetase complex interacting multifunctional protein 1","termid":"PBO:0039130"}


id: MONDO:0018573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrauterine growth restriction-short stature-early adult-onset diabetes syndrome","secondary_identifiers":["UMLS:C5681180","GARD:21818","MEDGEN:1801791","Orphanet:436144"],"termid":"MONDO:0018573","xrefs":{"Monarch":{"xref_id":"0018573"}}}


id: GO:2000155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cilium-dependent cell motility.","definition_xrefs":["GOC:jl","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium-dependent cell motility","termid":"GO:1902019"},{"relation_name":"is_a","term_name":"positive regulation of cell motility","termid":"GO:2000147"},{"relation_name":"positively_regulates","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cilium-dependent cell motility","synonyms":[{"name":"positive regulation of ciliary cell motility","type":"related"}],"termid":"GO:2000155"}


id: MONDO:0958119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare central nervous system embryonal tumor characterized by embryonal cells arranged in multilayered rosettes and displaying one of three morphological patterns: embryonal tumor with abundant neuropil and true rosettes, ependymoblastoma, or medulloepithelioma. The tumors typically have a C19MC alteration or (rarely) a DICER1 mutation and correspond to WHO grade IV. They are mostly localized intracranially, rarely in the spinal cord, and commonly cause signs and symptoms of elevated intracranial pressure, sometimes seizures and focal neurological signs. Most cases occur in children during the first two years of life.","definition_xrefs":["Orphanet:656417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"embryonal tumor with multilayered rosettes","secondary_identifiers":["UMLS:C5575350","MEDGEN:1804732","NCIT:C186534","GARD:6352"],"termid":"MONDO:0958119","xrefs":{"Monarch":{"xref_id":"0958119"}}}


id: PBO:0090127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane cation-chloride cotransporter Vhc1","termid":"PBO:0090127"}


id: MONDO:0020198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare conjunctival disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare conjunctival disease (obsolete MONDO:0020198)","secondary_identifiers":["Orphanet:98610"],"synonyms":[{"name":"rare conjunctival disease","type":"exact"}],"termid":"MONDO:0020198","xrefs":{"Monarch":{"xref_id":"0020198"}}}


id: PBO:0083113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase eta; involved in translesion synthesis during post-replication repair; catalyzes the synthesis of DNA opposite cyclobutane pyrimidine dimers and other lesions; involved in formation of post-replicative damage-induced genome-wide cohesion; may also have a role in protection against mitochondrial mutagenesis; may be involved in meiosis; mutations in human pol eta are responsible for XPV","termid":"PBO:0083113"}


id: PATO:0001678
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An efficiency quality inhering in a bearer by virtue of the bearer's having efficiency.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"efficiency","termid":"PATO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"efficient","termid":"PATO:0001678"}


id: GO:0140825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O.","definition_xrefs":["PMID:19339248","RHEA:56136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"lactoperoxidase activity","secondary_identifiers":["MetaCyc:PEROXID-RXN","EC:1.11.1.7"],"synonyms":[{"name":"peroxidase activity","type":"broad"}],"termid":"GO:0140825"}


id: GO:1904211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any membrane protein proteolysis that is involved in retrograde protein transport, ER to cytosol.","definition_xrefs":["PMID:22795130","GOC:PARL","GO_REF:0000060","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein proteolysis","termid":"GO:0033619"},{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"},{"relation_name":"part_of","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0030163","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"membrane protein proteolysis involved in retrograde protein transport, ER to cytosol","synonyms":[{"name":"intramembrane cleavage of ERAD substrate","type":"broad"},{"name":"intramembrane proteolysis involved in ERAD","type":"exact"},{"name":"membrane protein proteolysis involved in protein dislocation from ER","type":"exact"},{"name":"membrane protein proteolysis involved in protein retrotranslocation, ER to cytosol","type":"exact"},{"name":"membrane protein proteolysis involved in retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904211"}


id: PBO:0040143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNSD1 upstream open reading frame","termid":"PBO:0040143"}


id: _global:interacts_with_via_parasite-host_interaction
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"_global:symbiotically_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with_via_parasite-host_interaction","secondary_identifiers":["RO:0002443"],"termid":"_global:interacts_with_via_parasite-host_interaction"}


id: PBO:0091114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase subunit Ost4","termid":"PBO:0091114"}


id: GO:0050065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + pyruvate = L-alanine + L-allysine.","definition_xrefs":["RHEA:19393","EC:2.6.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"lysine-pyruvate 6-transaminase activity","secondary_identifiers":["KEGG_REACTION:R00453","MetaCyc:LYSINE--PYRUVATE-6-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-lysine:pyruvate aminotransferase activity","type":"related"},{"name":"Lys-AT","type":"related"},{"name":"lysine--pyruvate 6-aminotransferase activity","type":"exact"},{"name":"lysine-pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0050065"}


id: PBO:0081532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 442","termid":"PBO:0081532"}


id: GO:0120008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamatergic neuron differentiation.","definition_xrefs":["PMID:24030726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of glutamatergic neuron differentiation","termid":"GO:0120006"},{"relation_name":"positively_regulates","term_name":"glutamatergic neuron differentiation","termid":"GO:1905962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glutamatergic neuron differentiation","termid":"GO:0120008"}


id: GO:0060919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of auxins from outside of a cell into a cell.","definition_xrefs":["PMID:22773749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transport","termid":"GO:0060918"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"auxin import into cell","synonyms":[{"name":"auxin influx","type":"broad"}],"termid":"GO:0060919"}


id: GO:2001216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of hydroxymethylglutaryl-CoA reductase (NADPH) activity.","definition_xrefs":["GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity (obsolete GO:2001216)","synonyms":[{"name":"negative regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"related"},{"name":"negative regulation of HMG-CoA reductase activity","type":"related"}],"termid":"GO:2001216"}


id: GO:0005094
data:
  {"annotated_genes":["SJAG_03361","SJAG_02831"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77084,112758],"is_not":false,"summary":null,"term":"GO:0005094"}]},"cv_name":"molecular_function","definition":"Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-dissociation inhibitor activity","termid":"GO:0005092"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02831":null,"SJAG_03361":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"Rho GDP-dissociation inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005094","terms_by_termid":{"GO:0005094":null}}


id: PBO:0111865
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein","termid":"PBO:0111865"}


id: GO:0031796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 metabotropic GABA receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled GABA receptor binding","termid":"GO:0031795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1 metabotropic GABA receptor binding","synonyms":[{"name":"type 1 metabotropic GABA receptor ligand","type":"narrow"}],"termid":"GO:0031796"}


id: MONDO:0031068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, axonal, IIa 2II","secondary_identifiers":["UMLS:C5774227","OMIM:620068","MEDGEN:1824000"],"synonyms":[{"name":"CMT2II","type":"exact"},{"name":"charcot-marie-tooth disease, axonal, IIa 2II","type":"exact"},{"name":"charcot-marie-tooth neuropathy, IIa 2II","type":"exact"}],"termid":"MONDO:0031068","xrefs":{"Monarch":{"xref_id":"0031068"}}}


id: GO:0004168
data:
  {"annotated_genes":["SJAG_04231"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82129],"is_not":false,"summary":null,"term":"GO:0004168"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + dolichol = CDP + dolichyl phosphate.","definition_xrefs":["EC:2.7.1.108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"dolichol kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DOLICHOL-KINASE-RXN","Reactome:R-HSA-4755600","Reactome:R-HSA-446195","RHEA:13133"],"synonyms":[{"name":"CTP:dolichol O-phosphotransferase activity","type":"related"},{"name":"dolichol phosphokinase activity","type":"related"}],"termid":"GO:0004168","terms_by_termid":{"GO:0004168":null}}


id: PBO:0080478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 2-1","termid":"PBO:0080478"}


id: PBO:0029620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP-dependent_3'-5'_DNA_helicase_activity","termid":"PBO:0029620"}


id: PBO:0043593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXIII alpha 1 chain","termid":"PBO:0043593"}


id: PBO:0034670
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thick_stable_microtubule_bundle","termid":"PBO:0034670"}


id: GO:0034552
data:
  {"annotated_genes":["SJAG_03574","SJAG_07005","SJAG_00703","SJAG_01895"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109424,68567,72479,101127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034553"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex II.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00703":null,"SJAG_01895":null,"SJAG_03574":null,"SJAG_07005":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"respiratory chain complex II assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034552","terms_by_termid":{"GO:0034553":null}}


id: PBO:0071874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 12","termid":"PBO:0071874"}


id: PBO:0063544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine binding protein 1 pseudogene 3","termid":"PBO:0063544"}


id: MONDO:0054837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 57","secondary_identifiers":["MEDGEN:1648280","OMIM:618050","UMLS:C4748003"],"synonyms":[{"name":"MRD57","type":"related"},{"name":"TLK2-Related Neurodevelopmental Disorder","type":"exact"},{"name":"TLK2-related neurodevelopmental disorder","type":"exact"},{"name":"TLK2-related syndrome","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 57","type":"exact"},{"name":"intellectual disability, autosomal dominant 57","type":"exact"},{"name":"mental retardation, autosomal dominant 57","type":"related"}],"termid":"MONDO:0054837","xrefs":{"Monarch":{"xref_id":"0054837"}}}


id: PBO:0068178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 485","termid":"PBO:0068178"}


id: PBO:0029954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_microtubule_binding","termid":"PBO:0029954"}


id: PBO:0011476
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of sucrose to glucose is 3.1 (mM min-1 ml-2)","termid":"PBO:0011476"}


id: GO:0002690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of leukocyte chemotaxis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"positively_regulates","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte chemotaxis","synonyms":[{"name":"activation of leukocyte chemotaxis","type":"narrow"},{"name":"positive regulation of immune cell chemotaxis","type":"exact"},{"name":"positive regulation of leucocyte chemotaxis","type":"exact"},{"name":"stimulation of leukocyte chemotaxis","type":"narrow"},{"name":"up regulation of leukocyte chemotaxis","type":"exact"},{"name":"up-regulation of leukocyte chemotaxis","type":"exact"},{"name":"upregulation of leukocyte chemotaxis","type":"exact"}],"termid":"GO:0002690"}


id: PBO:0088422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv25","termid":"PBO:0088422"}


id: MONDO:0023067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Kaposi's sarcoma","termid":"MONDO:0005055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endemic Kaposi sarcoma","secondary_identifiers":["GARD:10431","MEDGEN:698516","icd11.foundation:509381237","UMLS:C1275231"],"synonyms":[{"name":"African Kaposi sarcoma","type":"related"},{"name":"African/endemic Kaposi sarcoma","type":"related"}],"termid":"MONDO:0023067","xrefs":{"Monarch":{"xref_id":"0023067"}}}


id: PBO:0050189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 6","termid":"PBO:0050189"}


id: PBO:0000961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase (predicted)","termid":"PBO:0000961"}


id: MONDO:0002259
data:
  {"annotated_genes":["SJAG_03077","SJAG_02954","SJAG_02690","SJAG_04703","SJAG_03418","SJAG_02294","SJAG_04148","SJAG_03720","SJAG_04110","SJAG_00630","SJAG_04337","SJAG_03051","SJAG_02339","SJAG_03698","SJAG_02829","SJAG_00103","SJAG_00377","SJAG_04398","SJAG_04114","SJAG_00301","SJAG_04950","SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009916"},{"annotations":[87637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[88136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[87221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[88678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[88024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010814"},{"annotations":[87777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[87023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[88766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[87453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[88211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[89012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[87822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[88511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"},{"annotations":[87439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[88228,88229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[87524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[87925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[88820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[88413,88414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the testis or the ovary.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00301":null,"SJAG_00377":null,"SJAG_00630":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02829":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03077":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04110":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04337":null,"SJAG_04398":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"gonadal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0018050","MESH:D006058","MEDGEN:9074","DOID:2277","NCIT:C26786"],"synonyms":[{"name":"disease of gonad","type":"exact"},{"name":"disease or disorder of gonad","type":"exact"},{"name":"disorder of gonad","type":"exact"},{"name":"disorder of gonads","type":"exact"},{"name":"gonad disease","type":"exact"},{"name":"gonad disease or disorder","type":"exact"},{"name":"gonadal disorder","type":"exact"},{"name":"gonadal disorders","type":"exact"}],"termid":"MONDO:0002259","terms_by_termid":{"MONDO:0008840":null,"MONDO:0008980":null,"MONDO:0009258":null,"MONDO:0009514":null,"MONDO:0009916":null,"MONDO:0010350":null,"MONDO:0010814":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014497":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0002259"}}}


id: MONDO:0021238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the cornea.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cornea neoplasm","secondary_identifiers":["MEDGEN:90940","NCIT:C4361","UMLS:C0339304"],"synonyms":[{"name":"cornea neoplasm (disease)","type":"exact"},{"name":"cornea tumor","type":"exact"},{"name":"cornea tumour","type":"exact"},{"name":"corneal neoplasm","type":"exact"},{"name":"corneal tumor","type":"exact"},{"name":"corneal tumour","type":"exact"},{"name":"neoplasm of cornea","type":"exact"},{"name":"neoplasm of the cornea","type":"exact"},{"name":"tumor of cornea","type":"exact"},{"name":"tumor of the cornea","type":"exact"},{"name":"tumour of cornea","type":"exact"},{"name":"tumour of the cornea","type":"exact"}],"termid":"MONDO:0021238","xrefs":{"Monarch":{"xref_id":"0021238"}}}


id: PBO:0053911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1205","termid":"PBO:0053911"}


id: PBO:0081995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 26","termid":"PBO:0081995"}


id: MONDO:1012146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, domestic cat","secondary_identifiers":["OMIA:000621-9685"],"termid":"MONDO:1012146","xrefs":{"Monarch":{"xref_id":"1012146"}}}


id: GO:0106137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a IkappaB kinase complex.","definition_xrefs":["PMID:12492477","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"IkappaB kinase complex binding","termid":"GO:0106137"}


id: GO:0009752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a salicylic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to salicylic acid","termid":"GO:0009751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of salicylic acid stimulus","synonyms":[{"name":"perception of salicylic acid stimulus","type":"related"}],"termid":"GO:0009752"}


id: GO:0047133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: electron-transferring flavoprotein + H2O + dimethylamine = reduced electron-transferring flavoprotein + formaldehyde + methylamine.","definition_xrefs":["MetaCyc:1.5.8.1-RXN","EC:1.5.8.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dimethylamine dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r1380","RHEA:10204"],"synonyms":[{"name":"DMADh activity","type":"related"},{"name":"dimethylamine:electron-transferring flavoprotein oxidoreductase activity","type":"related"}],"termid":"GO:0047133"}


id: PR:000050528
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the hhf3 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4, hhf3 gene translation product (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.12","termid":"PR:000050528"}


id: MOD:00349
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form 4-amino-3-isothiazolidinone-L-serine.","definition_xrefs":["PubMed:12802339","RESID:AA0344","PubMed:12802338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"4-amino-3-isothiazolidinone-L-serine","synonyms":[{"name":"(2S)-2-[(4R)-4-amino-3-oxo-1,2-thiazolidin-2-yl]-3-hydroxypropanoic acid","type":"exact"},{"name":"2-(4-amino-3-oxo-isothiazolidin-2-yl)-3-hydroxy-propanoic acid","type":"exact"},{"name":"4-amino-3-isothiazolidinone-L-serine","type":"exact"},{"name":"CROSSLNK N,N-(cysteine-1,S-diyl)serine (Cys-Ser)","type":"exact"},{"name":"N,N-(L-cysteine-1,S-diyl)-L-serine","type":"exact"},{"name":"serine-cysteine sulfenyl amide cross-link","type":"exact"},{"name":"serine-cysteine sulphenyl amide cross-link","type":"exact"}],"termid":"MOD:00349"}


id: PBO:0061014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nidogen 2","termid":"PBO:0061014"}


id: GO:0019629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionate that occurs in the 2-methylcitrate cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate catabolic process","termid":"GO:0019543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"propionate catabolic process, 2-methylcitrate cycle","synonyms":[{"name":"propionate breakdown, 2-methylcitrate cycle","type":"exact"},{"name":"propionate degradation, 2-methylcitrate cycle","type":"exact"}],"termid":"GO:0019629"}


id: PBO:0064591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member J","termid":"PBO:0064591"}


id: GO:1900018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 5 residues that is involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:19666497","PMID:10594013"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex (obsolete GO:1900018)","termid":"GO:1900018"}


id: FYPO:0002366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methylation during vegetative growth","termid":"FYPO:0000870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4me during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 methylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002366"}


id: PR:Q10187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ucp6 gene.","definition_xrefs":["UniProtKB:Q10187","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.13","synonyms":[{"name":"Spom972h-ucp6","type":"exact"}],"termid":"PR:Q10187"}


id: GO:0042693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cellular identity of muscle cells is acquired and determined.","definition_xrefs":["CL:0000187","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell fate commitment","termid":"GO:0042693"}


id: MONDO:0000706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A colitis caused by the introduction of harsh chemicals to the colon by an enema or other procedure. Chemical colitis can resemble ulcerative colitis, infectious colitis and pseudomembranous colitis endoscopically.","direct_ancestors":[{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"chemical colitis","secondary_identifiers":["DOID:0060186","SCTID:72965009","ICD9:558.9","ICD9:558"],"termid":"MONDO:0000706","xrefs":{"Monarch":{"xref_id":"0000706"}}}


id: MOD:01001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a 2-aminoisobutyric acid.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoisobutyric acid residue (Aib)","synonyms":[{"name":"2-amino-2-methylpropanoic acid","type":"exact"},{"name":"2-amino-2-methylpropionic acid","type":"exact"},{"name":"2-methylalanine","type":"exact"},{"name":"Aib","type":"exact"},{"name":"alpha,alpha-dimethylglycine","type":"exact"},{"name":"alpha-aminoisobutyric acid","type":"exact"},{"name":"alpha-methylalanine","type":"exact"}],"termid":"MOD:01001"}


id: FYPO:0006549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which gene expression occurs to a lower extent than normal. One or more parts of gene expression, such as transcription or translation, may be affected, and all genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased gene expression","synonyms":[{"name":"reduced gene expression","type":"exact"}],"termid":"FYPO:0006549"}


id: PBO:0047633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat storage inducing transmembrane protein 2","termid":"PBO:0047633"}


id: GO:0006312
data:
  {"annotated_genes":["SJAG_02226","SJAG_02339","SJAG_01410","SJAG_02556","SJAG_05353","SJAG_05173","SJAG_00757","SJAG_00995","SJAG_02724","SJAG_01419","SJAG_03221","SJAG_02079","SJAG_06597","SJAG_04530","SJAG_01601","SJAG_02267","SJAG_03097","SJAG_00247","SJAG_05239","SJAG_01076","SJAG_06642","SJAG_00640","SJAG_03898","SJAG_01832","SJAG_01677","SJAG_05105","SJAG_02460","SJAG_01495","SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74066,76871,77552,78913,105770,109686],"is_not":false,"summary":null,"term":"GO:0006312"},{"annotations":[102471,112777,108561,112253,89740,117004,90987,100997,118787,120774,98040,91115,110453,99294,107995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007534"},{"annotations":[81163],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045951"},{"annotations":[97879],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071140"},{"annotations":[114915,114914,114916,114917,98046,113695,114913,82015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"}]},"cv_name":"biological_process","definition":"The exchange, reciprocal or nonreciprocal, of genetic material between one DNA molecule and a homologous DNA region that occurs during mitotic cell cycles.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_00640":null,"SJAG_00757":null,"SJAG_00995":null,"SJAG_01076":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02339":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03898":null,"SJAG_04530":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05239":null,"SJAG_05353":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"mitotic recombination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Mitotic_crossover"],"termid":"GO:0006312","terms_by_termid":{"GO:0000722":null,"GO:0006312":null,"GO:0007534":null,"GO:0045951":null,"GO:0071140":null}}


id: PBO:0004642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1 (predicted)","termid":"PBO:0004642"}


id: SO:0001103
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with zinc ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_zinc_ion_contact_site","secondary_identifiers":["BS:00185"],"synonyms":[{"name":"Zn_contact_site","type":"exact"},{"name":"polypeptide zinc ion contact site","type":"exact"}],"termid":"SO:0001103"}


id: PBO:0067045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 65, pseudogene","termid":"PBO:0067045"}


id: PBO:0108710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp2","termid":"PBO:0108710"}


id: PBO:0039051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1","termid":"PBO:0039051"}


id: GO:0035906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the descending aorta over time, from its initial formation to the mature structure. The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["GOC:bf","UBERON:0001514","Wikipedia:Descending_aorta","MA:0002571","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"descending aorta development","termid":"GO:0035906"}


id: PBO:0059272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 1","termid":"PBO:0059272"}


id: PBO:0077792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase","termid":"PBO:0077792"}


id: GO:0007315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the specialized cytoplasm found at the poles of the egg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm organization","termid":"GO:0007028"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"oocyte anterior/posterior axis specification","termid":"GO:0007314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pole plasm assembly","secondary_identifiers":["GO:0048113"],"termid":"GO:0007315"}


id: PBO:0087432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit c'' of the vacuolar ATPase; v-ATPase functions in acidification of the vacuole; one of three proteolipid subunits of the V0 domain","termid":"PBO:0087432"}


id: MONDO:0019211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated congenital anonychia is characterized by nail abnormalities ranging from onychodystrophy (dystrophic nails) to anonychia (absence of nails). Onychodystrophy-anonychia has been described in at least four generations of a family with male-to-male transmission, suggesting autosomal dominant transmission. Anonychia has been described in approximately less than 20 cases; it is likely to be transmitted as an autosomal recessive trait. Total anonychia congenita, in which all the fingernails and toenails are absent, may have an autosomal dominant inheritance pattern.","definition_xrefs":["Orphanet:79143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital anonychia","secondary_identifiers":["GARD:10048"],"synonyms":[{"name":"autosomal recessive nonsyndromic congenital nail disorder-4","type":"related"},{"name":"congenital anonychia","type":"related"},{"name":"isolated anonychia","type":"exact"},{"name":"nonsyndromic congenital nail disorder, 4","type":"related"}],"termid":"MONDO:0019211","xrefs":{"Monarch":{"xref_id":"0019211"}}}


id: PBO:0055326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2754","termid":"PBO:0055326"}


id: PBO:0086108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of U2 snRNP into the spliceosome; forms a complex with Hsh49p and Hsh155p","termid":"PBO:0086108"}


id: GO:0035194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A posttranscriptional gene silencing pathway in which regulatory RNAs elicit silencing of specific target genes, either by mRNA destabilization or inhibition of translation.","definition_xrefs":["PMID:15020054","PMID:11201747","PMID:33184244","PMID:18771919","GOC:ems","PMID:15066275","PMID:32885814","PMID:11713190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"},{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulatory ncRNA-mediated post-transcriptional gene silencing","secondary_identifiers":["GO:0016246","Reactome:R-HSA-426496","Wikipedia:RNA_interference"],"synonyms":[{"name":"PTGS","type":"broad"},{"name":"RNA interference","type":"broad"},{"name":"RNA-dependent post-transcriptional gene silencing","type":"exact"},{"name":"RNA-mediated post-transcriptional gene silencing","type":"exact"},{"name":"RNA-mediated posttranscriptional gene silencing","type":"exact"},{"name":"RNAi","type":"broad"},{"name":"cosuppression","type":"related"},{"name":"ncRNA-mediated post-transcriptional gene silencing","type":"exact"},{"name":"post-transcriptional gene silencing by RNA","type":"related"},{"name":"posttranscriptional gene silencing by RNA","type":"exact"},{"name":"quelling","type":"related"}],"termid":"GO:0035194"}


id: GO:0033562
data:
  {"annotated_genes":["SJAG_04574","SJAG_01601","SJAG_03356","SJAG_02621","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100995,101441,112438,117964,120091],"is_not":false,"summary":null,"term":"GO:0033562"}]},"cv_name":"biological_process","definition":"A process in which the RNAi machinery mediates the degradation of nascent transcripts in association with chromatin.","definition_xrefs":["PMID:17512405","GOC:mah","GOC:vw","PMID:21151114","PMID:22431512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01601":null,"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"co-transcriptional gene silencing by RNA interference machinery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNAi-mediated CTGS","type":"exact"},{"name":"co-transcriptional gene silencing by small RNA","type":"exact"},{"name":"cotranscriptional gene silencing by RNA interference machinery","type":"related"},{"name":"cotranscriptional gene silencing by small RNA","type":"related"},{"name":"small RNA-mediated cotranscriptional gene silencing","type":"exact"}],"termid":"GO:0033562","terms_by_termid":{"GO:0033562":null}}


id: PBO:0004258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, unknown biological role","termid":"PBO:0004258"}


id: PBO:0079879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPK1A antisense RNA 1","termid":"PBO:0079879"}


id: FYPO:0007533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which arrested replication forks colocalize normally (i.e. indistinguishably from wild type) with nuclear pore complexes (NPCs). Normally, arrested replication forks relocate to NPCs as part of replication fork processing, and remain anchored at NPCs while recombination-dependent replication takes place.","definition_xrefs":["PomBase:mah","PMID:33159083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal replication fork processing","termid":"FYPO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000293","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal replication fork colocalization with nuclear pore complex","synonyms":[{"name":"normal replication fork colocalization with NPC","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore complex during mitotic S phase","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore complex during mitotic cell cycle","type":"related"},{"name":"normal replication fork colocalization with nuclear pore complex during vegetative growth","type":"exact"},{"name":"normal replication fork relocation to nuclear pore complex","type":"exact"},{"name":"normal replication fork relocation to nuclear pore complex during mitotic S phase","type":"exact"}],"termid":"FYPO:0007533"}


id: PR:O59778
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A biotin synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04215","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.02","secondary_identifiers":["UniProtKB:O59778"],"synonyms":[{"name":"Spom972h-bioB","type":"exact"}],"termid":"PR:O59778"}


id: GO:1902182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a shoot apical meristem over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","PMID:21496644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot apical meristem development","synonyms":[{"name":"SAM development","type":"exact"},{"name":"primary shoot meristem development","type":"related"},{"name":"promeristem development","type":"broad"}],"termid":"GO:1902182"}


id: GO:0090211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of establishment of blood-brain barrier","termid":"GO:0090210"},{"relation_name":"positively_regulates","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of blood-brain barrier","synonyms":[{"name":"positive regulation of establishment of BBB","type":"exact"}],"termid":"GO:0090211"}


id: PBO:0003814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex mu subunit Apm1","termid":"PBO:0003814"}


id: PBO:0038523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 2 (Junior blood group)","termid":"PBO:0038523"}


id: MONDO:0010152
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88776],"is_not":false,"summary":null,"term":"MONDO:0010152"}]},"cv_name":"mondo","definition":"Trichomegaly-retina pigmentary degeneration-dwarfism syndrome, also known as Oliver-McFarlane syndrome, is an extremely rare genetic disorder characterized by hair abnormalities, severe chorioretinal atrophy, hypopituitarism, short stature, and intellectual disability.","definition_xrefs":["Orphanet:3363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichomegaly-retina pigmentary degeneration-dwarfism syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:338532","GARD:5266","UMLS:C1848745","DOID:0111271","MESH:C536554","OMIM:275400","SCTID:719944006"],"synonyms":[{"name":"OMCS","type":"related"},{"name":"Oliver McFarlane syndrome","type":"related"},{"name":"Oliver-McFarlane syndrome","type":"exact"},{"name":"eyelashes, long with intellectual disability","type":"related"},{"name":"eyelashes, long, with intellectual disability","type":"related"},{"name":"eyelashes, long, with mental retardation","type":"related"},{"name":"long eyelashes-intellectual disability syndrome","type":"exact"},{"name":"trichomegaly with intellectual disability, dwarfism and pigmentary degeneration of retina","type":"related"},{"name":"trichomegaly with intellectual disability, dwarfism, and pigmentary Degeneration of retina","type":"related"},{"name":"trichomegaly with mental retardation, dwarfism, and pigmentary Degeneration of retina","type":"related"}],"termid":"MONDO:0010152","terms_by_termid":{"MONDO:0010152":null},"xrefs":{"Monarch":{"xref_id":"0010152"}}}


id: PBO:0085963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the growth defect of mutants lacking protein kinase A activity; involved in cAMP-mediated signaling; localized to the nucleus; similar to the mouse testis-specific protein PBS13","termid":"PBO:0085963"}


id: PR:Q9C1W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1W9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.06","synonyms":[{"name":"DNA ligase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-adl1","type":"exact"},{"name":"polydeoxyribonucleotide synthase [ATP] 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C1W9"}


id: PR:G2TRR1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gem7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem-associated protein 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.16","synonyms":[{"name":"Spom972h-gem7","type":"exact"}],"termid":"PR:G2TRR1"}


id: PBO:0084423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major isozyme of methylenetetrahydrofolate reductase; catalyzes the reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate in the methionine biosynthesis pathway","termid":"PBO:0084423"}


id: MONDO:1011156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marfan syndrome that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Marfan syndrome, non-human animal","termid":"MONDO:1010296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marfan syndrome, cattle","secondary_identifiers":["OMIA:000628-9913"],"termid":"MONDO:1011156","xrefs":{"Monarch":{"xref_id":"1011156"}}}


id: PBO:0052870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-14, pseudogene","termid":"PBO:0052870"}


id: PBO:0070251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 194 pseudogene","termid":"PBO:0070251"}


id: MONDO:0006670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the membranes surrounding the brain and spinal cord due to a bacterial infection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious meningitis","termid":"MONDO:0004796"},{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial meningitis","secondary_identifiers":["UMLS:C0085437","NCIT:C118297","MEDGEN:39048","MESH:D016920","SCTID:95883001","ICD9:320.9","DOID:9470","GARD:5881","ICD9:320","ICD9:320.7","icd11.foundation:684930313","ICD9:320.89","MedDRA:10004049","EFO:1000831"],"synonyms":[{"name":"Bacteria caused infectious meningitis","type":"exact"},{"name":"Bacteria infectious meningitis","type":"exact"},{"name":"meningitis, bacterial","type":"related"}],"termid":"MONDO:0006670","xrefs":{"Monarch":{"xref_id":"0006670"}}}


id: PBO:0034656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_recombination_frequency_at_subtelomere","termid":"PBO:0034656"}


id: PBO:0044129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 15","termid":"PBO:0044129"}


id: GO:0140678
data:
  {"annotated_genes":["SJAG_04699","SJAG_01821","SJAG_04505","SJAG_04627","SJAG_02786","SJAG_04398","SJAG_01245","SJAG_02594","SJAG_02874","SJAG_02470","SJAG_03974","SJAG_02194","SJAG_01118","SJAG_04999","SJAG_03272","SJAG_01210","SJAG_04633","SJAG_00452","SJAG_01072","SJAG_03629","SJAG_03931","SJAG_03717","SJAG_04546","SJAG_04422","SJAG_02380","SJAG_01330","SJAG_02485","SJAG_01150","SJAG_01348","SJAG_03309","SJAG_00460","SJAG_04203","SJAG_01867","SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93706,108248],"is_not":false,"summary":null,"term":"GO:0140678"},{"annotations":[62540,102402,120001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042030"},{"annotations":[72715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[110843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[63756,105181,67703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004866"},{"annotations":[90652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060698"},{"annotations":[111190,118981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004857"},{"annotations":[118290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005095"},{"annotations":[99100,94040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990624"},{"annotations":[67027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008073"},{"annotations":[101854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030414"},{"annotations":[77682,108943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[72034,91203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[120039,110350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"},{"annotations":[76366,77819,89663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[97353,98954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990846"},{"annotations":[95027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004867"},{"annotations":[78819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010521"},{"annotations":[117544,100568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990948"},{"annotations":[116610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055105"}]},"cv_name":"molecular_function","definition":"A molecular function regulator that inhibits or decreases the activity of its target via non-covalent binding that does not result in covalent modification to the target.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function regulator activity","termid":"GO:0098772"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00460":null,"SJAG_01072":null,"SJAG_01118":null,"SJAG_01150":null,"SJAG_01210":null,"SJAG_01245":null,"SJAG_01330":null,"SJAG_01348":null,"SJAG_01515":null,"SJAG_01821":null,"SJAG_01867":null,"SJAG_02194":null,"SJAG_02380":null,"SJAG_02470":null,"SJAG_02485":null,"SJAG_02594":null,"SJAG_02786":null,"SJAG_02874":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03629":null,"SJAG_03717":null,"SJAG_03931":null,"SJAG_03974":null,"SJAG_04203":null,"SJAG_04398":null,"SJAG_04422":null,"SJAG_04505":null,"SJAG_04546":null,"SJAG_04627":null,"SJAG_04633":null,"SJAG_04699":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"molecular function inhibitor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0140678","terms_by_termid":{"GO:0004857":null,"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0004864":null,"GO:0004865":null,"GO:0004866":null,"GO:0004867":null,"GO:0005095":null,"GO:0008073":null,"GO:0010521":null,"GO:0030291":null,"GO:0030414":null,"GO:0042030":null,"GO:0055105":null,"GO:0060698":null,"GO:0140678":null,"GO:1990624":null,"GO:1990846":null,"GO:1990948":null}}


id: PR:O13973
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.13c","synonyms":[{"name":"Spom972h-mrp10","type":"exact"}],"termid":"PR:O13973"}


id: FYPO:0008036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at the CENP-A boundary. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:36200823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nucleosome occupancy","termid":"FYPO:0007655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"increased nucleosome occupancy at CENP-A boundary","termid":"FYPO:0008036"}


id: GO:0004558
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103496,103497],"is_not":false,"summary":null,"term":"GO:0004558"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing alpha-(1->4)-linked alpha-D-glucose residues with release of alpha-D-glucose.","definition_xrefs":["EC:3.2.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"alpha-1,4-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191108","Reactome:R-HSA-5659899","Reactome:R-HSA-5659922","GO:0004562","Reactome:R-HSA-189102","MetaCyc:MALTODEXGLUCOSID-RXN","GO:0016982","Reactome:R-HSA-189053","Reactome:R-HSA-191116","Reactome:R-HSA-5659861","Reactome:R-HSA-191101","Reactome:R-HSA-5659879"],"synonyms":[{"name":"acid maltase activity","type":"related"},{"name":"alpha-D-glucosidase activity","type":"related"},{"name":"alpha-D-glucoside glucohydrolase activity","type":"related"},{"name":"alpha-glucopyranosidase activity","type":"related"},{"name":"alpha-glucoside hydrolase activity","type":"related"},{"name":"glucoinvertase activity","type":"related"},{"name":"glucosidoinvertase activity","type":"related"},{"name":"glucosidosucrase activity","type":"related"},{"name":"lysosomal alpha-glucosidase activity","type":"broad"},{"name":"maltase-glucoamylase activity","type":"related"}],"termid":"GO:0004558","terms_by_termid":{"GO:0004558":null}}


id: GO:0044149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of structure involved in a symbiotic process","synonyms":[{"name":"positive regulation of development of symbiont involved in interaction with host","type":"related"},{"name":"positive regulation of development of symbiont during interaction with host","type":"related"}],"termid":"GO:0044149"}


id: FYPO:0003800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at an origin of replication.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal chromatin binding at replication origin","synonyms":[{"name":"normal chromatin binding at origin of replication","type":"exact"}],"termid":"FYPO:0003800"}


id: FYPO:0004457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus","termid":"FYPO:0004455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to nucleus during nitrogen starvation","synonyms":[{"name":"decreased protein localisation to nucleus during nitrogen starvation","type":"exact"},{"name":"decreased protein localization to nucleus during nitrogen depletion","type":"exact"},{"name":"decreased protein localization to nucleus during nitrogen deprivation","type":"exact"},{"name":"reduced protein localization to nucleus during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004457"}


id: GO:0034482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 2'-O-sulfate. Results in sulfation of glucuronic acid and iduronic acid residues.","definition_xrefs":["PMID:17227754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondroitin sulfotransferase activity","termid":"GO:0034481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"chondroitin 2-sulfotransferase activity","secondary_identifiers":["MetaCyc:RXN-11560"],"synonyms":[{"name":"chondroitin 2-O-sulfotransferase activity","type":"exact"},{"name":"chondroitin 2-O-sulphotransferase activity","type":"exact"}],"termid":"GO:0034482"}


id: PBO:0002036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4 (predicted)","termid":"PBO:0002036"}


id: GO:0120177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the torso signaling pathway.","definition_xrefs":["GOC:ha","PMID:23732470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of torso signaling pathway","termid":"GO:0120175"},{"relation_name":"negatively_regulates","term_name":"torso signaling pathway","termid":"GO:0008293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of torso signaling pathway","termid":"GO:0120177"}


id: PBO:0048310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 21","termid":"PBO:0048310"}


id: PBO:0053592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 619","termid":"PBO:0053592"}


id: MONDO:0026186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic developmental defect of the eye (obsolete MONDO:0026186)","secondary_identifiers":["Orphanet:183557"],"termid":"MONDO:0026186","xrefs":{"Monarch":{"xref_id":"0026186"}}}


id: GO:0050980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in magnetoception in which a light stimulus is received and converted into a molecular signal. Downstream processing of the light information in addition to other sensory data allows organisms to perceive the orientation of a magnetic field.","definition_xrefs":["GOC:dos","GOC:ai","PMID:15886990","Wikipedia:Magnetoception"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of light stimulus involved in sensory perception","termid":"GO:0050962"},{"relation_name":"part_of","term_name":"magnetoreception","termid":"GO:0050958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of light stimulus involved in magnetoreception","synonyms":[{"name":"magnetoreception, detection of light stimulus","type":"exact"},{"name":"magnetoreception, sensory detection of light stimulus","type":"exact"},{"name":"magnetoreception, sensory transduction of light stimulus","type":"exact"},{"name":"sensory detection of light stimulus during magnetoreception","type":"exact"},{"name":"sensory transduction of light stimulus during magnetoreception","type":"exact"}],"termid":"GO:0050980"}


id: PBO:0033773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_site-specific_DNA_replication_termination_at_RTS1_barrier","termid":"PBO:0033773"}


id: PR:Q92352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2/3 complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2/3 complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.07c","secondary_identifiers":["UniProtKB:Q92352"],"synonyms":[{"name":"SPAC6G9.07c","type":"related"},{"name":"Spom972h-ARPC4","type":"exact"},{"name":"arp2/3 complex 20 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"arp20","type":"related"},{"name":"p20-ARC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92352"}


id: PBO:0076092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STUB1 pseudogene 1","termid":"PBO:0076092"}


id: GO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C4b product of the classical complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"},{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"complement component C4b receptor activity","termid":"GO:0001861"}


id: GO:0141127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters a Rab protein family-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24251537","PMID:30181274","PMID:30893609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host small GTPase-mediated signal transduction","termid":"GO:0044082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host Rab small GTPase signal transduction","synonyms":[{"name":"modulation by symbiont of host Rab protein mediated signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein-mediated signal transduction","type":"exact"},{"name":"modulation of host Rab protein signal transduction by symbiont","type":"exact"},{"name":"modulation of host Rab protein signaling by symbiont","type":"exact"},{"name":"modulation of host Rab protein signalling by symbiont","type":"exact"},{"name":"perturbation of host Rab protein signal transduction","type":"exact"},{"name":"symbiont-mediated perturbation of host Rab protein signal transduction","type":"exact"}],"termid":"GO:0141127"}


id: PBO:0001143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp2","termid":"PBO:0001143"}


id: PBO:0078892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 4-1","termid":"PBO:0078892"}


id: MONDO:0859082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombophilia","termid":"MONDO:0100240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombophilia, X-linked, due to factor 8 defect","secondary_identifiers":["MEDGEN:1805414","OMIM:301071","UMLS:C5676879"],"termid":"MONDO:0859082","xrefs":{"Monarch":{"xref_id":"0859082"}}}


id: PBO:0030411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_maltase_activity","termid":"PBO:0030411"}


id: GO:0002873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of natural killer cell tolerance induction","termid":"GO:0002871"},{"relation_name":"positively_regulates","term_name":"natural killer cell tolerance induction","termid":"GO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell tolerance induction","synonyms":[{"name":"activation of natural killer cell tolerance induction","type":"narrow"},{"name":"positive regulation of NK cell tolerance induction","type":"exact"},{"name":"stimulation of natural killer cell tolerance induction","type":"narrow"},{"name":"up regulation of natural killer cell tolerance induction","type":"exact"},{"name":"up-regulation of natural killer cell tolerance induction","type":"exact"},{"name":"upregulation of natural killer cell tolerance induction","type":"exact"}],"termid":"GO:0002873"}


id: PBO:0034587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_glycerophospholipids","termid":"PBO:0034587"}


id: PBO:0074683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63E","termid":"PBO:0074683"}


id: GO:0061318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a renal filtration cell. Renal filtration cells are specialized cells of the renal system that filter fluids by charge, size or both. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal filtration cell differentiation","termid":"GO:0061318"}


id: GO:1905942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["GO_REF:0000058","PMID:19737525","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"}


id: PBO:0080779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related X-linked","termid":"PBO:0080779"}


id: GO:2001175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H2B conserved C-terminal lysine ubiquitination.","definition_xrefs":["PMID:17576814"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:2001175)","synonyms":[{"name":"positive regulation of budding yeast H2B K123 ubiquitination","type":"related"},{"name":"positive regulation of fission yeast H2B K119 ubiquitination","type":"related"},{"name":"positive regulation of mammalian H2B K120 ubiquitination","type":"related"}],"termid":"GO:2001175"}


id: PBO:0058803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7845","termid":"PBO:0058803"}


id: MONDO:0007994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thanatophoric dysplasia type 2","termid":"MONDO:0008547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"micromelic bone dysplasia with cloverleaf skull","secondary_identifiers":["OMIM:156830","GARD:1404","UMLS:C1834928","MEDGEN:322531","MESH:C536429"],"synonyms":[{"name":"micromelic bone dysplasia with cloverleaf skull","type":"exact"}],"termid":"MONDO:0007994","xrefs":{"Monarch":{"xref_id":"0007994"}}}


id: PBO:0071305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 28","termid":"PBO:0071305"}


id: PBO:0034641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip,_with_protein_mislocalized_to_nucleus_and_spindle_pole_body","termid":"PBO:0034641"}


id: GO:0016223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + 2-oxopropanoate = pyruvate + beta-alanine.","definition_xrefs":["RHEA:14077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-alanine:pyruvate transaminase activity","secondary_identifiers":["Reactome:R-HSA-909776","EC:2.6.1.18","MetaCyc:2.6.1.18-RXN"],"synonyms":[{"name":"L-alanine:3-oxopropanoate aminotransferase activity","type":"related"},{"name":"beta-alanine--pyruvate aminotransferase activity","type":"related"},{"name":"beta-alanine-alpha-alanine transaminase activity","type":"related"},{"name":"beta-alanine-pyruvate aminotransferase activity","type":"exact"},{"name":"omega-amino acid--pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0016223"}


id: MONDO:0013168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the RBM20 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1DD","secondary_identifiers":["MESH:C567725","DOID:0110447","GARD:15627","MEDGEN:416441","OMIM:613172","UMLS:C2750995"],"synonyms":[{"name":"CMD1DD","type":"exact"},{"name":"RBM20 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1DD","type":"related"},{"name":"cardiomyopathy, dilated, type 1Dd","type":"exact"},{"name":"dilated cardiomyopathy type 1DD","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in RBM20","type":"exact"}],"termid":"MONDO:0013168","xrefs":{"Monarch":{"xref_id":"0013168"}}}


id: MONDO:0011972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complication of ovulation induction in infertility treatment. It is graded by the severity of symptoms which include ovary enlargement, multiple ovarian follicles; ovarian cysts; ascites; and generalized edema. The full-blown syndrome may lead to renal failure, respiratory distress, and even death. Increased capillary permeability is caused by the vasoactive substances, such as vascular endothelial growth factors, secreted by the overly-stimulated ovaries.","definition_xrefs":["MESH:D016471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian hyperstimulation syndrome","secondary_identifiers":["MedDRA:10033266","icd11.foundation:1216664013","DOID:5425","GARD:16668","ICD9:256.1","MEDGEN:38966","OMIM:608115","Orphanet:64739","SCTID:129635004","UMLS:C0085083"],"synonyms":[{"name":"OHSS","type":"exact"},{"name":"ovarian hyperstimulation syndrome","type":"exact"},{"name":"ovarian hyperstimulation syndrome, familial gestational spontaneous","type":"related"},{"name":"secondary Meig's syndrome","type":"exact"}],"termid":"MONDO:0011972","xrefs":{"Monarch":{"xref_id":"0011972"}}}


id: MONDO:0013028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adenosine monophosphate (AMP) deaminase deficiency is a metabolic disorder for which two forms have been described. Lack of activity of the erythrocyte isoform of AMP deaminase has been described in subjects with low plasma uric acid levels without obvious clinical relevance and will not be described further. Myoadenylate deaminase deficiency is an inherited disorder of muscular energy metabolism with a lack of AMP deaminase activity in skeletal muscle. It is characterized by exercise-induced muscle pain, cramps and/or early fatigue.","definition_xrefs":["Orphanet:45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0019254","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"adenosine monophosphate deaminase deficiency","secondary_identifiers":["UMLS:C2931781","GARD:547","SCTID:9105005","ICD9:277.2","MEDGEN:444140","icd11.foundation:550341491","MESH:C538234"],"synonyms":[{"name":"AMP deaminase deficiency","type":"exact"},{"name":"myoadenylate deaminase deficiency","type":"exact"}],"termid":"MONDO:0013028","xrefs":{"Monarch":{"xref_id":"0013028"}}}


id: PBO:0030589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_arginine_level","termid":"PBO:0030589"}


id: PBO:0000458
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.2","termid":"PBO:0000458"}


id: GO:0018723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-phenanthrol + X-SO3(-) = HX + 3-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-phenanthrol sulfotransferase activity (obsolete GO:0018723)","synonyms":[{"name":"3-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018723"}


id: GO:0046183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-idonate, the anion of idonic acid, an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"L-idonate metabolic process","termid":"GO:0019523"},{"relation_name":"is_a","term_name":"aldonic acid catabolic process","termid":"GO:0046176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-idonate catabolic process","synonyms":[{"name":"L-idonate breakdown","type":"exact"},{"name":"L-idonate catabolism","type":"exact"},{"name":"L-idonate degradation","type":"exact"}],"termid":"GO:0046183"}


id: PBO:0074373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 nonsense mediated mRNA decay associated PI3K related kinase","termid":"PBO:0074373"}


id: PBO:0114087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit H /peripheral stalk subunit F6, Atp14","termid":"PBO:0114087"}


id: PBO:0042737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPN antisense RNA 1","termid":"PBO:0042737"}


id: GO:0009863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by salicylic acid.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to salicylic acid stimulus","termid":"GO:0071446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"salicylic acid mediated signaling pathway","synonyms":[{"name":"salicylic acid mediated signal transduction","type":"exact"},{"name":"salicylic acid mediated signalling pathway","type":"exact"},{"name":"salicylic acid-mediated signaling pathway","type":"exact"}],"termid":"GO:0009863"}


id: MONDO:0013799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete efavirenz, poor metabolism of (obsolete MONDO:0013799)","secondary_identifiers":["OMIM:614546"],"synonyms":[{"name":"efavirenz central nervous system toxicity, susceptibility to","type":"related"},{"name":"efavirenz, poor metabolism of","type":"exact"}],"termid":"MONDO:0013799","xrefs":{"Monarch":{"xref_id":"0013799"}}}


id: GO:0060015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become granulosa cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"granulosa cell differentiation","termid":"GO:0060014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell fate commitment","termid":"GO:0060015"}


id: MONDO:1012276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"tibial dyschondroplasia, non-human animal","termid":"MONDO:1011954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tibial dyschondroplasia, turkey","secondary_identifiers":["OMIA:001007-9103"],"termid":"MONDO:1012276","xrefs":{"Monarch":{"xref_id":"1012276"}}}


id: MONDO:0032760
data:
  {"annotated_genes":["SJAG_05282","SJAG_04613"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88955,88956],"is_not":false,"summary":null,"term":"MONDO:0032760"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04613":null,"SJAG_05282":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay with or without dysmorphic facies and autism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1679263","UMLS:C5193106","OMIM:618454"],"synonyms":[{"name":"DEDDFA","type":"related"},{"name":"DEVELOPMENTAL DELAY WITH OR WITHOUT DYSMORPHIC FACIES AND AUTISM","type":"related"}],"termid":"MONDO:0032760","terms_by_termid":{"MONDO:0032760":null},"xrefs":{"Monarch":{"xref_id":"0032760"}}}


id: MONDO:0003942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromophobe renal cell carcinoma","termid":"MONDO:0017885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"eosinophilic variant of chromophobe renal cell carcinoma","secondary_identifiers":["DOID:6606","NCIT:C27889","UMLS:C1333405","MEDGEN:232458"],"synonyms":[{"name":"eosinophilic variant of chromophobe renal cell carcinoma","type":"exact"}],"termid":"MONDO:0003942","xrefs":{"Monarch":{"xref_id":"0003942"}}}


id: GO:0034786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-fluorenone + O2 + 2 H+ + 2 e- = 1-hydro-1,1a-dihydroxy-9-fluorenone.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-fluorenone-3,4-dioxygenase activity (obsolete GO:0034786)","termid":"GO:0034786"}


id: PBO:0065199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF19 divergent transcript","termid":"PBO:0065199"}


id: FYPO:0007102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains more than one meiotic spindle per nucleus during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:22292001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple meiotic spindles","termid":"FYPO:0006390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0000120"],"is_obsolete":false,"name":"multiple spindles during meiosis II","synonyms":[{"name":"additional spindles present during meiosis II","type":"exact"},{"name":"extra spindles during meiosis II","type":"exact"},{"name":"increased number of spindles during meiosis II","type":"exact"},{"name":"multiple meiotic spindles during meiosis II","type":"exact"},{"name":"spindles present in greater numbers during meiosis II","type":"exact"}],"termid":"FYPO:0007102"}


id: PBO:0069954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1247, pseudogene","termid":"PBO:0069954"}


id: MONDO:0015232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"radial deficiency-tibial hypoplasia syndrome","secondary_identifiers":["UMLS:C5190823","MEDGEN:1682367","GARD:18716","Orphanet:1121"],"termid":"MONDO:0015232","xrefs":{"Monarch":{"xref_id":"0015232"}}}


id: FYPO:0009102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain less cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"interphase microtubules present in decreased numbers","synonyms":[{"name":"decreased number of interphase microtubules","type":"exact"},{"name":"fewer microtubules present during mitotic interphase","type":"exact"}],"termid":"FYPO:0009102"}


id: PBO:0117139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM2 antisense RNA 3","termid":"PBO:0117139"}


id: PBO:0028352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle_during_metaphase","termid":"PBO:0028352"}


id: GO:0032437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense network of actin filaments found beneath the apical cell surface of hair cells, and into which stereocilia are inserted.","definition_xrefs":["PMID:8071151","PMID:2592408","PMID:12485990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0015629","GO:0005938"],"is_obsolete":false,"name":"cuticular plate","termid":"GO:0032437"}


id: PBO:0087645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GPI:protein transamidase complex; removes the GPI-anchoring signal and attaches GPI (glycosylphosphatidylinositol) to proteins in the ER; human homolog GPAA1 can complement growth defects of yeast thermosensitive mutant at restrictive temperature","termid":"PBO:0087645"}


id: PBO:0075353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 1","termid":"PBO:0075353"}


id: PR:Q9P7K5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git1 gene.","definition_xrefs":["UniProtKB:Q9P7K5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase activation protein git1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.20c","synonyms":[{"name":"Spom972h-git1","type":"exact"},{"name":"glucose-insensitive transcription protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7K5"}


id: GO:0009113
data:
  {"annotated_genes":["SJAG_01661","SJAG_03140","SJAG_01814","SJAG_02364","SJAG_01859","SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60472,116485],"is_not":false,"summary":null,"term":"GO:0009113"},{"annotations":[72502,119346,112317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[75695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"},{"relation_name":"is_a","term_name":"nucleobase biosynthetic process","termid":"GO:0046112"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-841"],"synonyms":[{"name":"purine base anabolism","type":"exact"},{"name":"purine base biosynthesis","type":"exact"},{"name":"purine base biosynthetic process","type":"exact"},{"name":"purine base formation","type":"exact"},{"name":"purine base synthesis","type":"exact"}],"termid":"GO:0009113","terms_by_termid":{"GO:0006168":null,"GO:0009113":null,"GO:0046084":null}}


id: PBO:0066133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASSF10 divergent transcript","termid":"PBO:0066133"}


id: GO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"In organisms that undergo pheromone-induced unidirectional conjugation, the process involved in desensitization following exposure to pheromone stimulus that acts to down-regulate further stimulation or block initial conjugation responses.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative adaptation of signaling pathway","termid":"GO:0022401"},{"relation_name":"part_of","term_name":"response to pheromone regulating pheromone-induced unidirectional conjugation","termid":"GO:0000765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative adaptation of signaling pathway by response to pheromone involved in pheromone-induced unidirectional conjugation","synonyms":[{"name":"adaptation to pheromone during pheromone-induced unidirectional conjugation","type":"related"},{"name":"desensitization to pheromone during pheromone-induced unidirectional conjugation","type":"exact"},{"name":"negative adaptation of signalling pathway by response to pheromone involved in pheromone-induced unidirectional conjugation","type":"exact"}],"termid":"GO:0000766"}


id: FYECO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ZnCl2","synonyms":[{"name":"zinc chloride added","type":"exact"}],"termid":"FYECO:0000173"}


id: PBO:0088865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic transport chaperone Srp40","termid":"PBO:0088865"}


id: GO:1900662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of emericellamide A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of emericellamide biosynthetic process","termid":"GO:1900659"},{"relation_name":"is_a","term_name":"regulation of emericellamide A biosynthetic process","termid":"GO:1900661"},{"relation_name":"negatively_regulates","term_name":"emericellamide A biosynthetic process","termid":"GO:1900617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of emericellamide A biosynthetic process","synonyms":[{"name":"down regulation of emericellamide A anabolism","type":"exact"},{"name":"down regulation of emericellamide A biosynthesis","type":"exact"},{"name":"down regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"down regulation of emericellamide A formation","type":"exact"},{"name":"down regulation of emericellamide A synthesis","type":"exact"},{"name":"down-regulation of emericellamide A anabolism","type":"exact"},{"name":"down-regulation of emericellamide A biosynthesis","type":"exact"},{"name":"down-regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"down-regulation of emericellamide A formation","type":"exact"},{"name":"down-regulation of emericellamide A synthesis","type":"exact"},{"name":"downregulation of emericellamide A anabolism","type":"exact"},{"name":"downregulation of emericellamide A biosynthesis","type":"exact"},{"name":"downregulation of emericellamide A biosynthetic process","type":"exact"},{"name":"downregulation of emericellamide A formation","type":"exact"},{"name":"downregulation of emericellamide A synthesis","type":"exact"},{"name":"inhibition of emericellamide A anabolism","type":"exact"},{"name":"inhibition of emericellamide A biosynthesis","type":"exact"},{"name":"inhibition of emericellamide A biosynthetic process","type":"narrow"},{"name":"inhibition of emericellamide A formation","type":"exact"},{"name":"inhibition of emericellamide A synthesis","type":"exact"},{"name":"negative regulation of emericellamide A anabolism","type":"exact"},{"name":"negative regulation of emericellamide A biosynthesis","type":"exact"},{"name":"negative regulation of emericellamide A formation","type":"exact"},{"name":"negative regulation of emericellamide A synthesis","type":"exact"}],"termid":"GO:1900662"}


id: GO:0070120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ciliary neurotrophic factor (CNTF) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ciliary neurotrophic factor-mediated signaling pathway","synonyms":[{"name":"CNTF-mediated signaling pathway","type":"exact"},{"name":"ciliary neurotrophic factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0070120"}


id: FYPO:0000596
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121606],"is_not":false,"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transposition is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal transposition","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal transposable element transposition","type":"exact"},{"name":"normal transposition during mitotic cell cycle","type":"related"},{"name":"normal transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: normal","type":"related"}],"termid":"FYPO:0000596","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0000596":null,"FYPO_EXT:0000001":null}}


id: PBO:0091354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A histone chaperone Scm3","termid":"PBO:0091354"}


id: GO:0039553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host chemokine activity.","definition_xrefs":["GOC:sp","VZ:813","GOC:bf","UniProtKB-KW:KW-1086"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host chemokine activity (obsolete GO:0039553)","synonyms":[{"name":"down-regulation by virus of host chemokine activity","type":"exact"},{"name":"downregulation by virus of host chemokine activity","type":"exact"},{"name":"inhibition by virus of host chemokine activity","type":"narrow"},{"name":"inhibition of host chemokines by virus","type":"narrow"},{"name":"negative regulation by virus of host chemokine activity","type":"exact"}],"termid":"GO:0039553"}


id: GO:0072533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the meta-hydroxylation of any of the three phenolic rings on tricoumaroyl spermidine or any of its mono- or dicaffeoyl spermidine derivatives.","definition_xrefs":["PMID:19779199","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}


id: PR:Q09713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A neuroguidin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00112","PANTHER:PTHR13237:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.06","secondary_identifiers":["UniProtKB:Q09713"],"synonyms":[{"name":"Spom972h-NGDN","type":"exact"}],"termid":"PR:Q09713"}


id: PBO:0031255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_replication_initiation","termid":"PBO:0031255"}


id: GO:1902679
data:
  {"annotated_genes":["SJAG_01804","SJAG_02846","SJAG_01799","SJAG_01707","SJAG_00266","SJAG_04921","SJAG_04249","SJAG_00410","SJAG_04039","SJAG_04539","SJAG_04584","SJAG_02048","SJAG_01157","SJAG_00996","SJAG_04607","SJAG_02385","SJAG_01680","SJAG_00441","SJAG_02444","SJAG_03143","SJAG_02981","SJAG_04613","SJAG_00969","SJAG_01728","SJAG_02752","SJAG_04512","SJAG_04312","SJAG_00802","SJAG_01311","SJAG_03081","SJAG_04026","SJAG_00987","SJAG_01254","SJAG_03319","SJAG_00290","SJAG_00792","SJAG_02898","SJAG_00861","SJAG_02730","SJAG_05343","SJAG_01199","SJAG_02104","SJAG_03473","SJAG_03067","SJAG_01000","SJAG_00142","SJAG_03845","SJAG_01230","SJAG_04381","SJAG_02255","SJAG_00926","SJAG_02858","SJAG_00124","SJAG_00163","SJAG_04268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[102965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045892"},{"annotations":[109909,102888,110172,110514,100762,106165,113107,73633,115803,78907,74170,93999,93016,96074,98149,75427,96580,107734,108678,114056,116242,119361,107831,95235,78524,76058,93975,108658,77106,74978,112679,96496,71835,110961,114943,61701,103746,82254,105859,89402,75785,108426,95136,95584,75558,58260,72269,93089,105457,95727,81382,108178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[75543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[102889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[119928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA biosynthetic process.","definition_xrefs":["GOC:TermGenie","GO:jl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of RNA biosynthetic process","termid":"GO:2001141"},{"relation_name":"negatively_regulates","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00142":null,"SJAG_00163":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00410":null,"SJAG_00441":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00969":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01157":null,"SJAG_01199":null,"SJAG_01230":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01680":null,"SJAG_01707":null,"SJAG_01728":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_02048":null,"SJAG_02104":null,"SJAG_02255":null,"SJAG_02385":null,"SJAG_02444":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02846":null,"SJAG_02858":null,"SJAG_02898":null,"SJAG_02981":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03143":null,"SJAG_03319":null,"SJAG_03473":null,"SJAG_03845":null,"SJAG_04026":null,"SJAG_04039":null,"SJAG_04249":null,"SJAG_04268":null,"SJAG_04312":null,"SJAG_04381":null,"SJAG_04512":null,"SJAG_04539":null,"SJAG_04584":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04921":null,"SJAG_05343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA biosynthetic process","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"down regulation of RNA anabolism","type":"exact"},{"name":"down regulation of RNA biosynthesis","type":"exact"},{"name":"down regulation of RNA biosynthetic process","type":"exact"},{"name":"down regulation of RNA formation","type":"exact"},{"name":"down regulation of RNA synthesis","type":"exact"},{"name":"down-regulation of RNA anabolism","type":"exact"},{"name":"down-regulation of RNA biosynthesis","type":"exact"},{"name":"down-regulation of RNA biosynthetic process","type":"exact"},{"name":"down-regulation of RNA formation","type":"exact"},{"name":"down-regulation of RNA synthesis","type":"exact"},{"name":"downregulation of RNA anabolism","type":"exact"},{"name":"downregulation of RNA biosynthesis","type":"exact"},{"name":"downregulation of RNA biosynthetic process","type":"exact"},{"name":"downregulation of RNA formation","type":"exact"},{"name":"downregulation of RNA synthesis","type":"exact"},{"name":"inhibition of RNA anabolism","type":"narrow"},{"name":"inhibition of RNA biosynthesis","type":"narrow"},{"name":"inhibition of RNA biosynthetic process","type":"narrow"},{"name":"inhibition of RNA formation","type":"narrow"},{"name":"inhibition of RNA synthesis","type":"narrow"},{"name":"negative regulation of RNA anabolism","type":"exact"},{"name":"negative regulation of RNA biosynthesis","type":"exact"},{"name":"negative regulation of RNA formation","type":"exact"},{"name":"negative regulation of RNA synthesis","type":"exact"}],"termid":"GO:1902679","terms_by_termid":{"GO:0000122":null,"GO:0010621":null,"GO:0016480":null,"GO:0034244":null,"GO:0045892":null,"GO:0060195":null}}


id: PR:G2TRP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21B10.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21B10.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.15","synonyms":[{"name":"Spom972h-SPBC21B10.15","type":"exact"}],"termid":"PR:G2TRP4"}


id: GO:0014884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a muscle inactivity stimulus is received by a cell and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of muscle inactivity","termid":"GO:0014869"},{"relation_name":"is_a","term_name":"response to muscle inactivity involved in regulation of muscle adaptation","termid":"GO:0014877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of muscle inactivity involved in regulation of muscle adaptation","termid":"GO:0014884"}


id: MONDO:0005144
data:
  {"annotated_genes":["SJAG_00668","SJAG_07000","SJAG_02509","SJAG_03598","SJAG_04178","SJAG_02242","SJAG_02695","SJAG_04489","SJAG_03170","SJAG_00053","SJAG_02289","SJAG_01317","SJAG_04387","SJAG_03345","SJAG_03923"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[87060,89088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[88590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[88701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[87466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[87213,87214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[88326,88325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[88452,88453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[88557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[87141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[89078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","definition":"An instance of amyotrophic lateral sclerosis that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis","termid":"MONDO:0004976"},{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00668":null,"SJAG_01317":null,"SJAG_02242":null,"SJAG_02289":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03598":null,"SJAG_03923":null,"SJAG_04178":null,"SJAG_04387":null,"SJAG_04489":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"familial amyotrophic lateral sclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0001356","MEDGEN:1642547","OMIMPS:105400","UMLS:C4551993"],"synonyms":[{"name":"hereditary amyotrophic lateral sclerosis","type":"exact"}],"termid":"MONDO:0005144","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008458":null,"MONDO:0010459":null,"MONDO:0010936":null,"MONDO:0011223":null,"MONDO:0012077":null,"MONDO:0012945":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0014531":null,"MONDO:0859529":null},"xrefs":{"Monarch":{"xref_id":"0005144"}}}


id: MONDO:0017121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with a Dandy-Walker malformation as major feature (obsolete MONDO:0017121)","secondary_identifiers":["Orphanet:269546"],"termid":"MONDO:0017121","xrefs":{"Monarch":{"xref_id":"0017121"}}}


id: MONDO:0060715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial tumoral calcinosis","termid":"MONDO:0018891"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"tumoral calcinosis, hyperphosphatemic, familial, 3","secondary_identifiers":["EFO:0009384","GARD:16282","MEDGEN:1638917","OMIM:617994","UMLS:C4693864"],"synonyms":[{"name":"HFTC3","type":"related"},{"name":"tumoral calcinosis, hyperphosphatemic, familial, 3","type":"exact"}],"termid":"MONDO:0060715","xrefs":{"Monarch":{"xref_id":"0060715"}}}


id: PBO:0085360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoprotein involved in vacuole inheritance; degraded in late M phase of the cell cycle; acts as a vacuole-specific receptor for myosin Myo2p; involved in regulation of asymmetric inheritance of aggregated/misfolded proteins and age reset","termid":"PBO:0085360"}


id: MONDO:1011819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic myelogenous leukemia, non-human animal","secondary_identifiers":["OMIA:001513"],"termid":"MONDO:1011819","xrefs":{"Monarch":{"xref_id":"1011819"}}}


id: PBO:0030388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cortex_morphology","termid":"PBO:0030388"}


id: PBO:0052078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 3","termid":"PBO:0052078"}


id: PBO:0055328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2756","termid":"PBO:0055328"}


id: FYPO:0001288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phospholipid measured in a cell is higher than normal. A phospholipid is any lipid containing phosphoric acid as a mono- or di-ester.","definition_xrefs":["CHEBI:16247","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered phospholipid level","termid":"FYPO:0001287"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased phospholipid level","synonyms":[{"name":"increased cellular phospholipid level","type":"exact"},{"name":"increased phospholipid accumulation","type":"related"},{"name":"increased phospholipid level during mitotic cell cycle","type":"related"},{"name":"increased phospholipid level during vegetative growth","type":"exact"}],"termid":"FYPO:0001288"}


id: GO:0160072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together an ubiquitin ligase and an ubiquitin ligase-substrate adaptor, permitting those molecules to function in a coordinated way.","definition_xrefs":["PMID:27664236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"ubiquitin ligase complex scaffold activity","synonyms":[{"name":"core protein activity for the CUL-RING ubiquitin ligase complex","type":"narrow"},{"name":"core protein activity for the Cullin-RING ubiquitin ligase complex","type":"narrow"}],"termid":"GO:0160072"}


id: FYECO:0000400
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which anidulafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ anidulafungin","termid":"FYECO:0000398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ anidulafungin LD","termid":"FYECO:0000400"}


id: PBO:0057268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 493","termid":"PBO:0057268"}


id: PBO:0113393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy; targeted to vacuole via AP-3 pathway","termid":"PBO:0113393"}


id: GO:0102248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 a 1,2-diacyl-sn-glycerol = a triacyl-sn-glycerol + a 2-monoglyceride.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete diacylglycerol transacylase activity (obsolete GO:0102248)","termid":"GO:0102248"}


id: SO:0000504
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one D-gene, one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_DJ_C_cluster","synonyms":[{"name":"D DJ C cluster","type":"exact"},{"name":"D-(DJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000504"}


id: GO:2001001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellodextrin metabolic process","termid":"GO:2000925"},{"relation_name":"is_a","term_name":"negative regulation of hemicellulose catabolic process","termid":"GO:2000989"},{"relation_name":"is_a","term_name":"regulation of xylan catabolic process","termid":"GO:2001000"},{"relation_name":"negatively_regulates","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of xylan catabolic process","synonyms":[{"name":"negative regulation of xylan breakdown","type":"exact"},{"name":"negative regulation of xylan catabolism","type":"exact"},{"name":"negative regulation of xylan degradation","type":"exact"}],"termid":"GO:2001001"}


id: GO:0030466
data:
  {"annotated_genes":["SJAG_02778","SJAG_03193","SJAG_04574","SJAG_02311","SJAG_03680","SJAG_00142","SJAG_00341","SJAG_02725","SJAG_00160","SJAG_00756","SJAG_03689","SJAG_03844","SJAG_01601","SJAG_02592","SJAG_01579","SJAG_02409","SJAG_02342","SJAG_03916","SJAG_00934","SJAG_03356","SJAG_02621","SJAG_02119","SJAG_03982","SJAG_03128","SJAG_04186","SJAG_03997","SJAG_02401","SJAG_00266","SJAG_04141","SJAG_01540","SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61225,73410,93106,94596,95927,96196,97383,98603,101005,101444,105998,106097,109913,110100,112440,113170,113234,114074,114176,115266,115643,115966,117406,117967,119689,119978,120095,120828],"is_not":false,"summary":null,"term":"GO:0030466"},{"annotations":[93018,96220,112297],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Repression of transcription at silent mating-type loci by alteration of the structure of chromatin.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00160":null,"SJAG_00266":null,"SJAG_00341":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02311":null,"SJAG_02342":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02592":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03128":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04141":null,"SJAG_04186":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"silent mating-type cassette heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006347","GO:0035389"],"synonyms":[{"name":"aging-dependent sterility","type":"narrow"},{"name":"chromatin silencing at HML and HMR","type":"narrow"},{"name":"chromatin silencing at silent mating-type cassette","type":"exact"},{"name":"establishment of chromatin silencing at silent mating-type cassette","type":"related"},{"name":"heterochromatic silencing at silent mating-type cassette","type":"exact"},{"name":"silent mating-type cassette chromatin silencing","type":"exact"},{"name":"silent mating-type cassette heterochromatin assembly","type":"exact"}],"termid":"GO:0030466","terms_by_termid":{"GO:0030466":null,"GO:0090055":null}}


id: MONDO:0022196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic erosive gastritis","secondary_identifiers":["MEDGEN:78626","UMLS:C0267145","SCTID:63137003","ICD9:535.40"],"synonyms":[{"name":"ceg - chronic erosive gastritis","type":"related"},{"name":"chronic erosive gastritis","type":"exact"},{"name":"diffuse varioliform gastritis","type":"related"},{"name":"idiopathic chronic, erosive gastritis","type":"related"},{"name":"varioliform gastritis","type":"related"}],"termid":"MONDO:0022196","xrefs":{"Monarch":{"xref_id":"0022196"}}}


id: _global:host_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"_global:symbiotically_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host_of","secondary_identifiers":["RO:0002453"],"termid":"_global:host_of"}


id: PBO:0013113
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ortholog of G4-Associated protein","termid":"PBO:0013113"}


id: PBO:0045732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EAF1 antisense RNA 1","termid":"PBO:0045732"}


id: FYPO:0000822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of P-factor, the mating pheromone produced by mating type plus cells, released into the growth medium is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased concentration of pheromone in growth medium","termid":"FYPO:0000820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"decreased concentration of P-factor in growth medium","synonyms":[{"name":"decreased accumulation of P-factor in growth medium","type":"related"},{"name":"decreased level of P-factor in growth medium","type":"exact"},{"name":"decreased release of P-factor into growth medium","type":"related"},{"name":"reduced concentration of P-factor in growth medium","type":"exact"}],"termid":"FYPO:0000822"}


id: FYPO:0002065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a 3'-5'-exoribonuclease activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal 3'-5'-exoribonuclease activity","termid":"FYPO:0002065"}


id: FYPO:0002308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of IMP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal IMP binding","termid":"FYPO:0002308"}


id: MONDO:1012263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tapetal degeneration, non-human animal","termid":"MONDO:1011983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tapetal degeneration, dog","secondary_identifiers":["OMIA:000980-9615"],"termid":"MONDO:1012263","xrefs":{"Monarch":{"xref_id":"1012263"}}}


id: PBO:0044527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled binding antagonist of beta catenin 1","termid":"PBO:0044527"}


id: GO:0051163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group. The D enantiomer is present in lichens and mushrooms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabitol metabolic process","termid":"GO:0051161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-arabitol metabolic process","synonyms":[{"name":"D-arabitol metabolism","type":"exact"}],"termid":"GO:0051163"}


id: GO:0019904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a specific domain of a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein domain specific binding","synonyms":[{"name":"protein domain-specific binding","type":"exact"}],"termid":"GO:0019904"}


id: GO:0006933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly of adhesions at the front and rear of a migrating cell. At the leading edge, adhesion disassembly accompanies the formation of new protrusions; at the cell rear, it promotes tail retraction.","definition_xrefs":["GOC:dph","PMID:11944043","GOC:tb","PMID:14657486","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"part_of","term_name":"substrate-dependent cell migration","termid":"GO:0006929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in substrate-bound cell migration","synonyms":[{"name":"substrate-bound cell migration, cell release from substrate","type":"exact"}],"termid":"GO:0006933"}


id: MONDO:0020421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary artery intramyocardial course","secondary_identifiers":["MEDGEN:182684","UMLS:C0948355","Orphanet:99085"],"termid":"MONDO:0020421","xrefs":{"Monarch":{"xref_id":"0020421"}}}


id: GO:0031672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line.","definition_xrefs":["ISBN:0321204131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"A band","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"A disc","type":"exact"},{"name":"Q disc","type":"exact"},{"name":"anisotropic disc","type":"exact"},{"name":"transverse disc","type":"exact"}],"termid":"GO:0031672"}


id: MONDO:0008262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Poland syndrome is marked by a unilateral absence or hypoplasia of the pectoralis major muscle (most frequently involving the sternocostal portion), and a variable degree of ipsilateral hand anomalies, including symbrachydactyly.","definition_xrefs":["Orphanet:2911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"syndromic breast hypoplasia/aplasia","termid":"MONDO:0015856"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poland syndrome","secondary_identifiers":["MEDGEN:10822","MedDRA:10036007","MESH:D011045","NCIT:C85017","ICD9:756.89","OMIM:173800","icd11.foundation:1364451323","SCTID:38371006","DOID:12961","UMLS:C0032357","GARD:7412"],"synonyms":[{"name":"Poland anomaly","type":"exact"},{"name":"Poland sequence","type":"exact"},{"name":"Poland syndactyly","type":"related"},{"name":"Poland syndrome","type":"exact"},{"name":"Poland's syndactyly","type":"exact"},{"name":"Poland's syndrome","type":"related"},{"name":"pectoralis muscle, absence of","type":"related"},{"name":"unilateral defect of pectoralis muscle and syndactyly of the hand","type":"related"}],"termid":"MONDO:0008262","xrefs":{"Monarch":{"xref_id":"0008262"}}}


id: PR:O60059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C56F2.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.08c","synonyms":[{"name":"Spom972h-puf1","type":"exact"}],"termid":"PR:O60059"}


id: FYPO:0003702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the microtubule cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal microtubule cytoskeleton morphology during vegetative growth","synonyms":[{"name":"normal microtubule cytoskeleton morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003702"}


id: PBO:0064253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A2","termid":"PBO:0064253"}


id: PBO:0046839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 12","termid":"PBO:0046839"}


id: PBO:0088942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) ATPase subunit Get3","termid":"PBO:0088942"}


id: PBO:0073525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing 19","termid":"PBO:0073525"}


id: PR:Q9Y7N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rox3 gene.","definition_xrefs":["UniProtKB:Q9Y7N2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.05c","synonyms":[{"name":"RNA polymerase II mediator complex protein rox3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rox3","type":"exact"},{"name":"mediator complex subunit 19 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7N2"}


id: MONDO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amblyopia","termid":"MONDO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disuse amblyopia","secondary_identifiers":["UMLS:C0152189","DOID:10378","MEDGEN:508918","SCTID:193638002","ICD9:368.02"],"synonyms":[{"name":"deprivation amblyopia","type":"exact"}],"termid":"MONDO:0001022","xrefs":{"Monarch":{"xref_id":"0001022"}}}


id: MONDO:0035819
data:
  {"annotated_genes":["SJAG_03892"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88383],"is_not":false,"summary":null,"term":"MONDO:0035819"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03892":null},"genotype_count":0,"is_obsolete":false,"name":"cerebellar hypoplasia-intellectual disability-congenital microcephaly-dystonia-anemia-growth retardation syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:603448","MEDGEN:1780242","GARD:18020","UMLS:C5543287","OMIM:619273"],"synonyms":[{"name":"CIMDAG syndrome","type":"exact"}],"termid":"MONDO:0035819","terms_by_termid":{"MONDO:0035819":null},"xrefs":{"Monarch":{"xref_id":"0035819"}}}


id: GO:0052840
data:
  {"annotated_genes":["SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77857],"is_not":false,"summary":null,"term":"GO:0052840"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol tetrakisphosphate + H2O = 1D-myo-inositol pentakisphosphate + phosphate.","definition_xrefs":["PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol diphosphate tetrakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-10963","Reactome:R-HSA-1855166"],"termid":"GO:0052840","terms_by_termid":{"GO:0052840":null}}


id: MOD:00003
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Entry from Unimod.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized protein modification","termid":"MOD:00032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Unimod","termid":"MOD:00003"}


id: MONDO:1010867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-mannosidosis that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidosis, non-human animal","termid":"MONDO:1010172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidosis, sheep","secondary_identifiers":["OMIA:000625-9940"],"termid":"MONDO:1010867","xrefs":{"Monarch":{"xref_id":"1010867"}}}


id: PBO:0085652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mismatch repair and meiotic recombination; only certain frameshift intermediates are mismatch repair substrates; forms a complex with Mlh1p, plays accessory role in stimulating activity of MLH1/PMS1 complex","termid":"PBO:0085652"}


id: SO:1000029
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An incomplete chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"deletion","termid":"SO:0000159"},{"relation_name":"is_a","term_name":"intrachromosomal_mutation","termid":"SO:1000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_deletion","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_deletion"],"synonyms":[{"name":"(Drosophila)Df","type":"related"},{"name":"(bacteria)&ampDgr;","type":"related"},{"name":"(fungi)D","type":"related"},{"name":"chromosomal deletion","type":"exact"},{"name":"deficiency","type":"exact"}],"termid":"SO:1000029"}


id: GO:0050069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + NAD+ = 1,2-didehydropiperidine-2-carboxylate + NH3 + NADH.","definition_xrefs":["EC:1.4.1.15","MetaCyc:LYSINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lysine dehydrogenase activity","secondary_identifiers":["RHEA:18505"],"synonyms":[{"name":"L-lysine:NAD+ oxidoreductase (deaminating, cyclizing)","type":"related"}],"termid":"GO:0050069"}


id: MONDO:0005243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cushing syndrome (obsolete MONDO:0005243)","termid":"MONDO:0005243","xrefs":{"Monarch":{"xref_id":"0005243"}}}


id: MONDO:1011643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve disease, non-human animal","secondary_identifiers":["OMIA:000654"],"termid":"MONDO:1011643","xrefs":{"Monarch":{"xref_id":"1011643"}}}


id: GO:0018395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-lysine to peptidyl-5-hydroxy-L-lysine.","definition_xrefs":["RESID:AA0028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine hydroxylation","termid":"GO:0017185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine","termid":"GO:0018395"}


id: PBO:0042841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 45","termid":"PBO:0042841"}


id: PR:P36590
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05042","PANTHER:PTHR10344:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.07c","secondary_identifiers":["UniProtKB:P36590"],"synonyms":[{"name":"Spom972h-DTYMK","type":"exact"},{"name":"dTMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36590"}


id: GO:0042476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"odontogenesis","secondary_identifiers":["Wikipedia:Odontogenesis","GO:0042477"],"synonyms":[{"name":"odontogenesis of calcareous or chitinous tooth","type":"narrow"},{"name":"odontogeny","type":"exact"},{"name":"odontosis","type":"exact"},{"name":"tooth development","type":"related"},{"name":"tooth morphogenesis","type":"exact"}],"termid":"GO:0042476"}


id: SO:0001666
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sub element of the DCE core promoter element with consensus sequence CTGT.","definition_xrefs":["SO:ke","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"DCE","termid":"SO:0001664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCE_SII","synonyms":[{"name":"DCE SII","type":"exact"}],"termid":"SO:0001666"}


id: SO:1001283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon signal for a UAA stop codon redefinition.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon_signal","termid":"SO:1001288"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UAA_stop_codon_signal","synonyms":[{"name":"UAA stop codon signal","type":"exact"}],"termid":"SO:1001283"}


id: PBO:0077294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 37","termid":"PBO:0077294"}


id: GO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic gene regulation mechanism that positively regulates gene expression by demethylation of cytosine residues in chromosomal CpG islands. CpG islands are genomic regions that contain a high frequency of the CG dinucleotide and are often associated with the transcription start site of genes.","definition_xrefs":["PMID:36150101","Wikipedia:Cpg_island"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription initiation-coupled chromatin remodeling","termid":"GO:0045815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"positive regulation of gene expression via chromosomal CpG island demethylation","synonyms":[{"name":"DNA demethylation","type":"broad"},{"name":"DNA hypomethylation of CpG island","type":"exact"},{"name":"hypomethylation of CpG island","type":"exact"},{"name":"positive regulation of gene expression via chromosomal CpG dinucleotide demethylation","type":"exact"}],"termid":"GO:0044029"}


id: MONDO:0000707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A colitis which can occur as a complication of ileostomy or colostomy.","direct_ancestors":[{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"diversion colitis","secondary_identifiers":["SCTID:51290000","UMLS:C0267532","ICD9:558","DOID:0060187","icd11.foundation:553304993","ICD9:558.9","MEDGEN:540758"],"termid":"MONDO:0000707","xrefs":{"Monarch":{"xref_id":"0000707"}}}


id: GO:1990713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that negatively regulates apoptotic processes. In human, this anti-apoptotic complex is a homodimer of BIRC5 (survivin) and provides one survivin molecule to the chromosomal passenger complex (CPC).","definition_xrefs":["GOC:bhm","PMID:10949038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"survivin complex","synonyms":[{"name":"Baculoviral IAP repeat-containing protein 5 complex","type":"exact"},{"name":"survivin homodimer complex","type":"narrow"}],"termid":"GO:1990713"}


id: FYPO:0001874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the preferential localization of a protein to either the old or new spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","synonyms":[{"name":"abnormal asymmetric protein localisation to old or new mitotic spindle pole body","type":"exact"},{"name":"abnormal asymmetric protein localization to old or new mitotic SPB","type":"exact"},{"name":"abnormal asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"abnormal asymmetric protein localization to old or new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"abnormal asymmetric protein localization to old or new mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"abnormal occurrence of normally asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0001874"}


id: PBO:0084831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for translation of the COB mRNA; forms a complex with Cbp3p that binds to mt ribosomes near the polypeptide tunnel exit and promotes efficient translation of the COB mRNA; Cbp3p-Cbp6p complex also interacts with newly synthesized cytochrome b (Cobp) and Cbp4p to promote assembly of Cobp into the cytochrome bc1 complex; Cbp3p-Cbp6p complex is sequestered if assembly of Complex III is blocked, downregulating COB mRNA translation","termid":"PBO:0084831"}


id: PBO:0029192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment","termid":"PBO:0029192"}


id: GO:0098558
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the smooth endoplasmic reticulum membrane that faces the lumen.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of endoplasmic reticulum membrane","termid":"GO:0098553"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum membrane","termid":"GO:0030868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"lumenal side of smooth endoplasmic reticulum membrane","termid":"GO:0098558"}


id: PBO:0039645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1B1 pseudogene 1","termid":"PBO:0039645"}


id: GO:0052125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis on or near host (obsolete GO:0052125)","termid":"GO:0052125"}


id: FYPO:0001915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore membrane formation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000121"],"is_obsolete":false,"name":"abolished prospore membrane formation","synonyms":[{"name":"abolished ascospore-type prospore membrane assembly","type":"exact"},{"name":"abolished forespore membrane formation","type":"exact"},{"name":"prospore membrane formation abolished","type":"exact"}],"termid":"FYPO:0001915"}


id: PBO:0064762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase E like pseudogene","termid":"PBO:0064762"}


id: GO:0003786
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79026],"is_not":false,"summary":null,"term":"GO:0003786"}]},"cv_name":"molecular_function","definition":"Binding to an actin filament along its length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament binding","termid":"GO:0051015"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003779"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003779","GO:0008092","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"actin lateral binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0003786","terms_by_termid":{"GO:0003786":null}}


id: MOD:01841
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links either two or an L-cysteine residue and an L-serine residue by a thioether bond to form a lanthionine, either D- or L- or meso-lanthionine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"lanthionine","synonyms":[{"name":"2,6-diamino-4-thiaheptanedioic acid","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxyethyl)sulfanylpropanoic acid","type":"exact"},{"name":"3,3'-thiobis-(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-thiobis-L-alanine","type":"exact"},{"name":"S-(2-amino-2-carboxyethyl)-L-cysteine","type":"exact"},{"name":"bis(2-amino-2-carboxyethyl)sulfanediyl","type":"exact"},{"name":"bis(2-amino-2-carboxyethyl)sulfide","type":"exact"}],"termid":"MOD:01841"}


id: PBO:0065342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periaxin","termid":"PBO:0065342"}


id: MONDO:0045012
data:
  {"annotated_genes":["SJAG_01474","SJAG_00717","SJAG_02696","SJAG_04270","SJAG_02855","SJAG_03024","SJAG_04810","SJAG_04865","SJAG_02148","SJAG_03509","SJAG_03018"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[89059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[87382,87383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"},{"annotations":[87872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[88563,88564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[88431,88432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[86889,86890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[87603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014793"},{"annotations":[89030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of steroid metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01474":null,"SJAG_02148":null,"SJAG_02696":null,"SJAG_02855":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03509":null,"SJAG_04270":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"steroid metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:541265","SCTID:28710006","UMLS:C0268283"],"synonyms":[{"name":"disorder of steroid metabolic process","type":"exact"},{"name":"disorder of steroid metabolism","type":"exact"},{"name":"steroid metabolic process disease","type":"exact"},{"name":"steroid metabolism disease","type":"exact"}],"termid":"MONDO:0045012","terms_by_termid":{"MONDO:0008974":null,"MONDO:0009849":null,"MONDO:0010035":null,"MONDO:0010621":null,"MONDO:0011503":null,"MONDO:0011816":null,"MONDO:0012481":null,"MONDO:0013310":null,"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0045012"}}}


id: PBO:0080193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 1","termid":"PBO:0080193"}


id: PBO:0035999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_Cutin-1","termid":"PBO:0035999"}


id: PBO:0028903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028903"}


id: MONDO:0010653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked syndrome characterized by intellectual deficiency, microcephaly, leanness and mild short stature.","definition_xrefs":["Orphanet:3242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic anorectal malformation (obsolete MONDO:0015246)","termid":"MONDO:0015246"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Renpenning syndrome","secondary_identifiers":["icd11.foundation:1415315699","ICD9:759.89","SCTID:699669001","OMIM:309500","DOID:0060179","GARD:9509","MEDGEN:208670","NCIT:C165533","MESH:C537761","UMLS:C0796135"],"synonyms":[{"name":"Golabi-Ito-Hall syndrome","type":"exact"},{"name":"MRXS3","type":"related"},{"name":"MRXS8","type":"related"},{"name":"RENS1","type":"related"},{"name":"Renpenning syndrome","type":"exact"},{"name":"Renpenning syndrome 1","type":"related"},{"name":"Renpenning syndrome type 1","type":"exact"},{"name":"Sutherland-Haan X-linked intellectual disability syndrome","type":"exact"},{"name":"Sutherland-Haan X-linked mental retardation syndrome","type":"exact"},{"name":"Sutherland-Haan syndrome","type":"related"},{"name":"X-linked intellectual disability Renpenning type","type":"exact"},{"name":"X-linked intellectual disability due to PQBP1 mutations","type":"exact"},{"name":"X-linked intellectual disability syndromic 3","type":"related"},{"name":"X-linked intellectual disability with spastic diplegia","type":"exact"},{"name":"X-linked intellectual disability, Renpenning type","type":"exact"},{"name":"X-linked mental retardation Renpenning type","type":"exact"},{"name":"X-linked mental retardation syndromic 3","type":"related"},{"name":"X-linked mental retardation with spastic diplegia","type":"exact"},{"name":"intellectual disability, X-linked 55","type":"related"},{"name":"intellectual disability, X-linked Renpenning type","type":"related"},{"name":"intellectual disability, X-linked, Renpenning type","type":"related"},{"name":"intellectual disability, X-linked, syndromic 3","type":"related"},{"name":"intellectual disability, X-linked, syndromic 8","type":"related"},{"name":"intellectual disability, X-linked, with spastic diplegia","type":"related"},{"name":"mental retardation, X-linked 55","type":"related"},{"name":"mental retardation, X-linked Renpenning type","type":"related"},{"name":"mental retardation, X-linked, Renpenning type","type":"related"},{"name":"mental retardation, X-linked, syndromic 3","type":"related"},{"name":"mental retardation, X-linked, syndromic 8","type":"related"},{"name":"mental retardation, X-linked, with spastic diplegia","type":"related"},{"name":"renpenning syndrome, X-linked recessive","type":"exact"},{"name":"syndromic X-linked intellectual disability 8","type":"exact"},{"name":"syndromic X-linked mental retardation 8","type":"exact"}],"termid":"MONDO:0010653","xrefs":{"Monarch":{"xref_id":"0010653"}}}


id: FYPO:0004622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle disassembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle disassembly","termid":"FYPO:0004621"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000054","FYPO:0001985","FYPO:0000337","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitotic spindle disassembly","synonyms":[{"name":"abolished mitotic spindle disassembly during vegetative growth","type":"exact"},{"name":"abolished spindle disassembly during mitotic cell cycle","type":"related"},{"name":"spindle disassembly involved in mitosis abolished","type":"exact"}],"termid":"FYPO:0004622"}


id: GO:0061046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in lung morphogenesis","termid":"GO:0061046"}


id: PBO:0057432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550b-2","termid":"PBO:0057432"}


id: GO:1904679
data:
  {"annotated_genes":["SJAG_04506","SJAG_03595"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73780,74780],"is_not":false,"summary":null,"term":"GO:1904679"}]},"cv_name":"biological_process","definition":"The directed movement of myo-inositol from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:9560432","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"myo-inositol transport","termid":"GO:0015798"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"myo-inositol import across plasma membrane","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0097357"],"synonyms":[{"name":"myo-inositol import into cell","type":"exact"}],"termid":"GO:1904679","terms_by_termid":{"GO:1904679":null}}


id: MONDO:0017844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sezary syndrome (SS) is an aggressive form of cutaneous T-cell lymphoma characterized by a triad of erythroderma, lymphadenopathy and circulating atypical lymphocytes (Sezary cells).","definition_xrefs":["Orphanet:3162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell non-Hodgkin lymphoma","termid":"MONDO:0000607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"Sezary syndrome","secondary_identifiers":["GARD:7629","ICD9:202.2","MedDRA:10040500","SCTID:118611004","EFO:1000785","MEDGEN:19959","MESH:D012751","ICDO:9701/3","NORD:1707","NCIT:C3366","UMLS:C0036920","icd11.foundation:1358020385","MedDRA:10040493","ONCOTREE:SS","DOID:8541"],"synonyms":[{"name":"CTCL / Sezary syndrome","type":"exact"},{"name":"SC)zary syndrome","type":"exact"},{"name":"SS","type":"related"},{"name":"Sezary disease","type":"exact"},{"name":"Sezary lymphoma","type":"exact"},{"name":"Sezary syndrome","type":"exact"},{"name":"Sezary's disease","type":"exact"},{"name":"Sezary's lymphoma","type":"related"},{"name":"Sheehan Syndrome","type":"exact"},{"name":"Sézary lymphoma","type":"exact"},{"name":"Sézary syndrome","type":"exact"},{"name":"cutaneous T-cell lymphoma/Sezary syndrome","type":"exact"}],"termid":"MONDO:0017844","xrefs":{"Monarch":{"xref_id":"0017844"}}}


id: GO:0034803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxy-2-naphthoate + O2 = (3E)-3-[(6Z)-6-(carboxymethylene)cyclohexa-2,4-dien-1-ylidene]-2-oxopropanate.","definition_xrefs":["UM-BBD_reactionID:r1104"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-2-naphthoate 2,3-dioxygenase activity (obsolete GO:0034803)","termid":"GO:0034803"}


id: PBO:0002690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PvGal biosynthesis protein Pvg5","termid":"PBO:0002690"}


id: PBO:0002934
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.46","termid":"PBO:0002934"}


id: FYPO:0006386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that normally localizes to a compact region at the tip of a shmoo, or mating projection, is more dispersed than normal.","definition_xrefs":["PMID:19627505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"protein abnormally dispersed at shmoo tip","synonyms":[{"name":"abnormally dispersed protein localization at shmoo tip","type":"exact"},{"name":"protein abnormally dispersed at mating projection tip","type":"exact"},{"name":"protein abnormally dispersed at shmoo projection","type":"related"}],"termid":"FYPO:0006386"}


id: GO:0010884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid storage","termid":"GO:0010883"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of lipid localization","termid":"GO:1905954"},{"relation_name":"positively_regulates","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid storage","synonyms":[{"name":"positive regulation of lipid sequestration","type":"narrow"}],"termid":"GO:0010884"}


id: GO:0008568
data:
  {"annotated_genes":["SJAG_01530","SJAG_04566"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75803,78225],"is_not":false,"summary":null,"term":"GO:0008568"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP.","definition_xrefs":["PMID:10910766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide conformation or assembly isomerase activity","termid":"GO:0120544"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"microtubule destabilizing activity","termid":"GO:0170060"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01530":null,"SJAG_04566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"microtubule severing ATPase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9668419","MetaCyc:3.6.4.3-RXN","EC:5.6.1.1"],"synonyms":[{"name":"ATP phosphohydrolase (tubulin-dimerizing)","type":"exact"},{"name":"katanin activity","type":"narrow"},{"name":"microtubule-severing ATPase activity","type":"exact"}],"termid":"GO:0008568","terms_by_termid":{"GO:0008568":null}}


id: GO:0070596
data:
  {"annotated_genes":["SJAG_02278","SJAG_00610","SJAG_01028","SJAG_04184","SJAG_04236","SJAG_02916","SJAG_04666","SJAG_00424","SJAG_03057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75281,80559,73158,72369,75109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[91262,94267,96799,104749],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"},{"relation_name":"is_a","term_name":"(1->3)-alpha-glucan metabolic process","termid":"GO:0070595"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"1,3-alpha-glucan anabolism","type":"exact"},{"name":"1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"1,3-alpha-glucan formation","type":"exact"},{"name":"1,3-alpha-glucan synthesis","type":"exact"},{"name":"alpha-1,3 glucan anabolism","type":"exact"},{"name":"alpha-1,3 glucan biosynthesis","type":"exact"},{"name":"alpha-1,3 glucan biosynthetic process","type":"exact"},{"name":"alpha-1,3 glucan formation","type":"exact"},{"name":"alpha-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0070596","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


