# terms

id: PBO:0005386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_pseudo anticodon AAC","termid":"PBO:0005386"}


id: MONDO:0016397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal disease with epilepsy (obsolete MONDO:0016397)","secondary_identifiers":["Orphanet:225681"],"termid":"MONDO:0016397","xrefs":{"Monarch":{"xref_id":"0016397"}}}


id: PBO:0055793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LOXL2 antisense RNA 1","termid":"PBO:0055793"}


id: PR:P0CAN8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nxt1 gene.","definition_xrefs":["UniProtKB:P0CAN8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTF2-related export protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.03","synonyms":[{"name":"Spom972h-nxt1","type":"exact"},{"name":"p15 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:P0CAN8"}


id: PBO:0066455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 8, pseudogene","termid":"PBO:0066455"}


id: MONDO:0008657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vibratory angioedema (obsolete MONDO:0008657)","termid":"MONDO:0008657","xrefs":{"Monarch":{"xref_id":"0008657"}}}


id: PBO:0055673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase C, hepatic type","termid":"PBO:0055673"}


id: FYPO:0007677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in cellular membranes is abnormal.","definition_xrefs":["PomBase:mah","PMID:32320462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane lipid distribution","termid":"FYPO:0006545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal sterol distribution","termid":"FYPO:0007677"}


id: PBO:0059022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 11","termid":"PBO:0059022"}


id: GO:1903514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ion from endoplasmic reticulum to cytosol.","definition_xrefs":["GOC:BHF","PMID:16402920","GO_REF:0000078","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol by endoplasmic reticulum","synonyms":[{"name":"calcium ion transport from endoplasmic reticulum to cytosol","type":"broad"}],"termid":"GO:1903514"}


id: GO:0072365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a cellular ketone metabolic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0072365)","synonyms":[{"name":"regulation of cellular ketone metabolic process by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"},{"name":"regulation of cellular ketone metabolism by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072365"}


id: SO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contig of BAC reads.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"BAC","termid":"SO:0000153"},{"relation_name":"is_a","term_name":"contig","termid":"SO:0000149"},{"relation_name":"part_of","term_name":"BAC","termid":"SO:0000153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC_read_contig","synonyms":[{"name":"BAC read contig","type":"exact"}],"termid":"SO:0001866"}


id: PBO:0068149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 456","termid":"PBO:0068149"}


id: GO:0072233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric thick ascending limb over time, from its formation to the mature structure. The metanephric thick ascending limb is the last part of the metanephric loop of Henle. Its thick, mitochondria-rich epithelium characterizes the outer medulla, and is responsible for very avid active salt transport. At the macula densa, the thick ascending limb connects to the distal convoluted tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thick ascending limb development","termid":"GO:0072023"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric thick ascending limb development","synonyms":[{"name":"metanephric TAL development","type":"exact"}],"termid":"GO:0072233"}


id: PBO:0087225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Second largest subunit of DNA polymerase II (DNA polymerase epsilon); required for maintenance of fidelity of chromosomal replication; essential motif in C-terminus is required for formation of the four-subunit Pol epsilon; expression peaks at the G1/S phase boundary; Cdc28p substrate","termid":"PBO:0087225"}


id: GO:1990366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic acid.","definition_xrefs":["PMID:23356676","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete response to organic acid (obsolete GO:1990366)","synonyms":[{"name":"response to organic acid","type":"exact"}],"termid":"GO:1990366"}


id: PATO:0001769
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along an axis.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positional polarity","synonyms":[{"name":"cellular polarity","type":"related"}],"termid":"PATO:0001769"}


id: PBO:0055099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2517","termid":"PBO:0055099"}


id: PBO:0034479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_synthase_(NADH)_activity","termid":"PBO:0034479"}


id: MONDO:0024559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 1","secondary_identifiers":["OMIM:607086","Orphanet:229","UMLS:C0345050","MEDGEN:91038","GARD:15408","MESH:C562834"],"synonyms":[{"name":"AAT1","type":"exact"},{"name":"Erdheim cystic medial necrosis of aorta","type":"related"},{"name":"FAA1","type":"related"},{"name":"aneurysm, thoracic aortic","type":"related"},{"name":"annuloaortic ectasia","type":"related"},{"name":"aortic aneurysm, familial thoracic","type":"related"},{"name":"aortic dissection, familial","type":"related"}],"termid":"MONDO:0024559","xrefs":{"Monarch":{"xref_id":"0024559"}}}


id: PBO:0055390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2820","termid":"PBO:0055390"}


id: PR:P87233
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- phf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWM histone demethylase complex subunit phf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.07c","synonyms":[{"name":"PHD finger domain-containing protein phf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-phf1","type":"exact"}],"termid":"PR:P87233"}


id: FYPO:0004729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubules are formed by the extension of existing nuclear microtubules arising from fragmentation of the mitotic spindle. Normally, cytoplasmic microtubules are nucleated from microtubule organizing centers in the cytoplasm.","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule formation from nuclear microtubules","termid":"FYPO:0004727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"cytoplasmic microtubule formation from nuclear microtubules following spindle microtubule fragmentation","synonyms":[{"name":"cytoplasmic microtubule formation from nuclear microtubules following mitotic spindle microtubule fragmentation","type":"exact"},{"name":"cytoplasmic microtubule formation from nuclear microtubules following spindle microtubule fragmentation during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubule formation from nuclear microtubules following spindle microtubule fragmentation during vegetative growth","type":"exact"}],"termid":"FYPO:0004729"}


id: GO:0015069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-amino-1-deoxy-scyllo-inositol 4-phosphate + L-arginine = 1-guanidino-1-deoxy-scyllo-inositol 4-phosphate + L-ornithine.","definition_xrefs":["RHEA:13265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidinotransferase activity","termid":"GO:0015067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"scyllo-inosamine-4-phosphate amidinotransferase activity","secondary_identifiers":["KEGG_REACTION:R03477","MetaCyc:2.1.4.2-RXN","EC:2.1.4.2"],"synonyms":[{"name":"L-arginine:1-amino-1-deoxy-scyllo-inositol-4-phosphate amidinotransferase activity","type":"related"},{"name":"L-arginine:inosamine phosphate amidinotransferase activity","type":"related"},{"name":"L-arginine:inosamine-P-amidinotransferase activity","type":"related"},{"name":"inosamine-P amidinotransferase activity","type":"related"},{"name":"inosamine-phosphate amidinotransferase activity","type":"exact"}],"termid":"GO:0015069"}


id: PBO:0067578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 735, pseudogene","termid":"PBO:0067578"}


id: PBO:0087634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; loss results in a defect in vacuolar acidification","termid":"PBO:0087634"}


id: GO:0102741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,7-dimethylxanthine + S-adenosyl-L-methionine = H+ + caffeine + S-adenosyl-L-homocysteine. Also converts theobromine to caffeine and 7-methylxanthine to theobromine.","definition_xrefs":["EC:2.1.1.160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"caffeine synthase activity","synonyms":[{"name":"3N-methyltransferase activity","type":"related"},{"name":"dimethylxanthine methyltransferase activity","type":"related"},{"name":"paraxanthine:S-adenosyl-L-methionine 3-N-methyltransferase activity","type":"narrow"},{"name":"theobromine:S-adenosyl-L-methionine 1-N-methyltransferase activity","type":"narrow"}],"termid":"GO:0102741"}


id: GO:0035439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate = halima-5(6),13-dien-15-yl diphosphate.","definition_xrefs":["EC:5.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674","GO:0009975"],"is_obsolete":false,"name":"halimadienyl-diphosphate synthase activity","secondary_identifiers":["RHEA:25621"],"synonyms":[{"name":"halima-5(6),13-dien-15-yl-diphosphate lyase (cyclizing)","type":"related"},{"name":"halimadienyl diphosphate synthase activity","type":"related"}],"termid":"GO:0035439"}


id: GO:0004866
data:
  {"annotated_genes":["SJAG_04633","SJAG_01072","SJAG_00460","SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63756,67703,105181],"is_not":false,"summary":null,"term":"GO:0004866"},{"annotations":[95027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004867"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of an endopeptidase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase inhibitor activity","termid":"GO:0030414"},{"relation_name":"is_a","term_name":"endopeptidase regulator activity","termid":"GO:0061135"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_01072":null,"SJAG_04398":null,"SJAG_04633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0004857","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"endopeptidase inhibitor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"alpha-2 macroglobulin","type":"related"},{"name":"endoproteinase inhibitor","type":"narrow"},{"name":"proteinase inhibitor","type":"narrow"}],"termid":"GO:0004866","terms_by_termid":{"GO:0004866":null,"GO:0004867":null}}


id: GO:0008660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-aminocyclopropane-1-carboxylate + H2O = 2-oxobutanate + NH4.","definition_xrefs":["RHEA:16933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase activity","secondary_identifiers":["MetaCyc:4.1.99.4-RXN","EC:3.5.99.7","KEGG_REACTION:R00997","UM-BBD_reactionID:r0357","GO:0018806"],"synonyms":[{"name":"1-aminocyclopropane carboxylic acid deaminase activity","type":"related"},{"name":"1-aminocyclopropane-1-carboxylate aminohydrolase (isomerizing)","type":"related"},{"name":"1-aminocyclopropane-1-carboxylate endolyase (deaminating) activity","type":"related"},{"name":"ACC deaminase activity","type":"related"}],"termid":"GO:0008660"}


id: MONDO:0017315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature-webbed neck-heart disease syndrome is characterized by short stature, intellectual deficit, facial dysmorphism, short webbed neck, skin changes and congenital heart defects. It has been reported in four Arab Bedouin sibs born to consanguineous parents.","definition_xrefs":["Orphanet:2865"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-webbed neck-heart disease syndrome","secondary_identifiers":["MEDGEN:419677","UMLS:C2930950","GARD:583","SCTID:721073008","MESH:C535613"],"synonyms":[{"name":"Al Gazali Aziz Salem syndrome","type":"related"},{"name":"Al Gazali-Aziz-Salem syndrome","type":"exact"},{"name":"short stature, intellectual disability, facial dysmorphism, short webbed neck, skin changes and congenital heart disease","type":"related"},{"name":"short stature, webbed neck, heart disease","type":"related"}],"termid":"MONDO:0017315","xrefs":{"Monarch":{"xref_id":"0017315"}}}


id: MONDO:1011948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"navicular disease, non-human animal","secondary_identifiers":["OMIA:000704"],"termid":"MONDO:1011948","xrefs":{"Monarch":{"xref_id":"1011948"}}}


id: PR:Q09718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-2 complex subunit mu that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00157","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 complex subunit mu (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.09c","secondary_identifiers":["UniProtKB:Q09718"],"synonyms":[{"name":"Mu2-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AP2M1","type":"exact"},{"name":"clathrin assembly protein complex 2 mu medium chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin coat assembly protein AP50 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin coat-associated protein AP50 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"plasma membrane adaptor AP-2 50 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09718"}


id: PBO:0074971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-13","termid":"PBO:0074971"}


id: MONDO:0008302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any central precocious puberty in which the cause of the disease is a mutation in the KISS1R gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central precocious puberty 1","secondary_identifiers":["MEDGEN:812209","DOID:0112310","UMLS:C3805879","OMIM:176400"],"synonyms":[{"name":"CPPB1","type":"related"},{"name":"KISS1R central precocious puberty","type":"exact"},{"name":"central precocious puberty caused by mutation in KISS1R","type":"exact"},{"name":"precocious puberty, central, 1","type":"exact"},{"name":"precocious puberty, central, type 1","type":"exact"}],"termid":"MONDO:0008302","xrefs":{"Monarch":{"xref_id":"0008302"}}}


id: MONDO:0017593
data:
  {"annotated_genes":["SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"}]},"cv_name":"mondo","definition":"Juvenile amyotrophic lateral sclerosis (JALS) is a very rare severe motor neuron disease characterized by progressive upper and lower motor neuron degeneration causing facial spasticity, dysarthria, and gait disorders with onset before 25 years of age.","definition_xrefs":["Orphanet:300605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"juvenile amyotrophic lateral sclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:11901","MEDGEN:923704","SCTID:718555006","UMLS:C3468114"],"synonyms":[{"name":"JALS","type":"exact"},{"name":"amyotrophic lateral sclerosis, juvenile","type":"related"},{"name":"juvenile Charcot disease","type":"exact"},{"name":"juvenile Lou Gehrig disease","type":"exact"}],"termid":"MONDO:0017593","terms_by_termid":{"MONDO:0013715":null},"xrefs":{"Monarch":{"xref_id":"0017593"}}}


id: FYPO:0000728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch organization","termid":"FYPO:0000790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin cortical patch assembly","synonyms":[{"name":"abnormal F-actin patch assembly","type":"exact"},{"name":"abnormal actin cortical patch assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch assembly during vegetative growth","type":"exact"},{"name":"abnormal actin patch assembly","type":"exact"}],"termid":"FYPO:0000728"}


id: MONDO:1010805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, domestic guinea pig","secondary_identifiers":["OMIA:000810-10141"],"termid":"MONDO:1010805","xrefs":{"Monarch":{"xref_id":"1010805"}}}


id: MOD:00868
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a natural, non-standard encoded residue, such as N-formyl-L-methionine, L-selenocysteine, or L-pyrrolysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural residue","termid":"MOD:00009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural, non-standard encoded residue","termid":"MOD:00868"}


id: PR:O13996
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized glycosyl hydrolase C27E2.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.01","synonyms":[{"name":"Spom972h-SPAC27E2.01","type":"exact"}],"termid":"PR:O13996"}


id: MONDO:0009753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurovisceral storage disease with Curvilinear bodies (obsolete MONDO:0009753)","secondary_identifiers":["OMIM:257000","MESH:C564944"],"synonyms":[{"name":"neurovisceral storage disease with Curvilinear bodies","type":"exact"}],"termid":"MONDO:0009753","xrefs":{"Monarch":{"xref_id":"0009753"}}}


id: GO:0004956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostaglandin D receptor activity","synonyms":[{"name":"PGD receptor activity","type":"related"},{"name":"PGD(2) receptor activity","type":"exact"}],"termid":"GO:0004956"}


id: PBO:0082022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 family member B, cell cycle regulator","termid":"PBO:0082022"}


id: FYPO:0009036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of benzamidine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to benzamidine","synonyms":[{"name":"resistance to benzamidine during mitotic cell cycle","type":"related"},{"name":"resistance to benzamidine during vegetative growth","type":"exact"},{"name":"resistant to benzamidine","type":"exact"}],"termid":"FYPO:0009036"}


id: SO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded RNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_sequence_secondary_structure","synonyms":[{"name":"RNA sequence secondary structure","type":"exact"}],"termid":"SO:0000122"}


id: FYECO:0000102
data:
  {"alleles_by_uniquename":{"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[121241],"is_not":false,"summary":null,"term":"FYECO:0000102"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown on agar plates.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":1,"genotypes_by_uniquename":{"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"agar plates","references_by_uniquename":{"PMID:27678009":null},"single_locus_annotated_genes":["SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta"],"synonyms":[{"name":"solid agar plates","type":"exact"}],"termid":"FYECO:0000102","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYPO_EXT:0000003":null}}


id: PBO:0054530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1930","termid":"PBO:0054530"}


id: PBO:0044509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 1 interacting protein","termid":"PBO:0044509"}


id: GO:1904000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eating behavior.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11961051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eating behavior","termid":"GO:1903998"},{"relation_name":"is_a","term_name":"positive regulation of feeding behavior","termid":"GO:2000253"},{"relation_name":"positively_regulates","term_name":"eating behavior","termid":"GO:0042755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eating behavior","synonyms":[{"name":"activation of eating behavior","type":"narrow"},{"name":"activation of eating behaviour","type":"narrow"},{"name":"positive regulation of eating behaviour","type":"exact"},{"name":"up regulation of eating behavior","type":"exact"},{"name":"up regulation of eating behaviour","type":"exact"},{"name":"up-regulation of eating behavior","type":"exact"},{"name":"up-regulation of eating behaviour","type":"exact"},{"name":"upregulation of eating behavior","type":"exact"},{"name":"upregulation of eating behaviour","type":"exact"}],"termid":"GO:1904000"}


id: GO:0050299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = ADP + 2 H+ + streptomycin 3''-phosphate.","definition_xrefs":["EC:2.7.1.87","RHEA:18377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"streptomycin 3''-kinase activity","secondary_identifiers":["KEGG_REACTION:R02227","MetaCyc:STREPTOMYCIN-3-KINASE-RXN"],"synonyms":[{"name":"ATP:streptomycin 3''-phosphotransferase activity","type":"related"},{"name":"streptomycin 3''-kinase (phosphorylating)","type":"related"},{"name":"streptomycin 3''-phosphotransferase activity","type":"related"}],"termid":"GO:0050299"}


id: MONDO:0006389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm with skeletal muscle differentiation affecting the prostate.","definition_xrefs":["NCIT:C5522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate sarcoma","termid":"MONDO:0002854"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate rhabdomyosarcoma","secondary_identifiers":["EFO:1000498","MEDGEN:233356","UMLS:C1335518","DOID:3252"],"synonyms":[{"name":"prostate gland rhabdomyosarcoma","type":"exact"},{"name":"prostate gland rhabdomyosarcoma (disease)","type":"exact"},{"name":"prostate rhabdomyosarcoma","type":"exact"},{"name":"rhabdomyosarcoma (disease) of prostate gland","type":"exact"},{"name":"rhabdomyosarcoma of prostate","type":"exact"},{"name":"rhabdomyosarcoma of the prostate","type":"exact"}],"termid":"MONDO:0006389","xrefs":{"Monarch":{"xref_id":"0006389"}}}


id: FYPO:0000727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of cytoskeletal structures comprising actin filaments does not occur normally.","definition_xrefs":["GO:0007015","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0004803","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin filament organization during vegetative growth","synonyms":[{"name":"abnormal actin filament organisation during vegetative growth","type":"exact"},{"name":"abnormal actin filament organization during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of actin filament localization during vegetative growth","type":"narrow"}],"termid":"FYPO:0000727"}


id: GO:0047927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin 44 + 2-oxoglutarate + O2 = gibberellin 19 + succinate + CO2.","definition_xrefs":["PMID:32652020"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin-44 dioxygenase activity (obsolete GO:0047927)","termid":"GO:0047927"}


id: MONDO:0010871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinic acidemia","secondary_identifiers":["MESH:C563952","OMIM:600335","UMLS:C1838243","MEDGEN:373921","Orphanet:936"],"synonyms":[{"name":"succinic acidemia","type":"exact"}],"termid":"MONDO:0010871","xrefs":{"Monarch":{"xref_id":"0010871"}}}


id: MONDO:0016904
data:
  {"annotated_genes":["SJAG_03424","SJAG_01548"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87536,87537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 5","termid":"MONDO:0016870"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01548":null,"SJAG_03424":null},"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:262038","GARD:20825","icd11.foundation:285885131"],"synonyms":[{"name":"partial deletion of chromosome 5q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 5","type":"exact"},{"name":"partial monosomy of chromosome 5q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 5","type":"exact"}],"termid":"MONDO:0016904","terms_by_termid":{"MONDO:0007925":null},"xrefs":{"Monarch":{"xref_id":"0016904"}}}


id: PBO:0071205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 46","termid":"PBO:0071205"}


id: MOD:01705
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen with an isotope tagged reagent acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}


id: SO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with a minus 1 frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"minus_1_frameshift","termid":"SO:0000866"},{"relation_name":"is_a","term_name":"mRNA_with_frameshift","termid":"SO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_minus_1_frameshift","synonyms":[{"name":"mRNA with minus 1 frameshift","type":"exact"}],"termid":"SO:0000282"}


id: PBO:0056019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM family member 14B","termid":"PBO:0056019"}


id: GO:0048442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sepal over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ development","termid":"GO:0048437"},{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"},{"relation_name":"part_of","term_name":"flower calyx development","termid":"GO:0048464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal development","secondary_identifiers":["GO:0048421"],"termid":"GO:0048442"}


id: GO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimeric protein complex having creatine kinase activity.","definition_xrefs":["PMID:173175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatine kinase complex","termid":"GO:0002185"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cytosolic creatine kinase complex","termid":"GO:0002186"}


id: MONDO:0012508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that combines agammaglobulinemia with marked microcephaly, significant developmental delay, craniosynostosis, a severe dermatitis, cleft palate, narrowing of the choanae, and blepharophimosis. It has been described in three siblings, two males and one female, born to nonconsanguineous parents. Transmission is probably autosomal recessive. It has been suggested that this syndrome represents a new form of agammaglobulinemia due to a defect in early B-cell maturation.","definition_xrefs":["Orphanet:83617"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"congenital agammaglobulinemia","termid":"MONDO:0001902"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic agammaglobulinemia","termid":"MONDO:0016463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agammaglobulinemia-microcephaly-craniosynostosis-severe dermatitis syndrome","secondary_identifiers":["UMLS:C1864848","SCTID:722281001","GARD:10011","OMIM:610483","MESH:C538055","MEDGEN:351236"],"synonyms":[{"name":"agammaglobulinemia, microcephaly, and severe dermatitis","type":"related"}],"termid":"MONDO:0012508","xrefs":{"Monarch":{"xref_id":"0012508"}}}


id: MONDO:0015659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious disease with epilepsy (obsolete MONDO:0015659)","secondary_identifiers":["Orphanet:166490"],"termid":"MONDO:0015659","xrefs":{"Monarch":{"xref_id":"0015659"}}}


id: FYPO:0004207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature siRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased siRNA level","synonyms":[{"name":"increased mature siRNA level","type":"exact"},{"name":"increased siRNA accumulation","type":"related"},{"name":"increased siRNA level during mitotic cell cycle","type":"related"},{"name":"increased siRNA level during vegetative growth","type":"exact"},{"name":"increased siRNA transcript level","type":"exact"},{"name":"increased small interfering RNA level","type":"exact"}],"termid":"FYPO:0004207"}


id: GO:0048197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of priming complexes to form a coat on a Golgi membrane. Priming complexes associate laterally and additional coat proteins are recruited from the cytosol to the forming coat. Cargo proteins diffuse into the budding site and become trapped by their interactions with the coat.","definition_xrefs":["ISBN:0716731363","GOC:mah","PMID:10219233","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0061024","GO:0044085","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"Golgi membrane coat protein complex assembly","synonyms":[{"name":"Golgi apparatus membrane coat protein complex assembly","type":"exact"},{"name":"Golgi membrane bud coat oligomerisation","type":"narrow"},{"name":"dictyosome membrane binding by cytosolic coat proteins","type":"narrow"},{"name":"dictyosome membrane bud coat oligomerisation","type":"narrow"}],"termid":"GO:0048197"}


id: PBO:0068678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 59, pseudogene","termid":"PBO:0068678"}


id: GO:0002610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of plasmacytoid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"regulates","term_name":"plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002610"}


id: PBO:0012315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal family membrane transporter (predicted)","termid":"PBO:0012315"}


id: GO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.","definition_xrefs":["ISBN:0878932453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiogenesis","secondary_identifiers":["Wikipedia:Angiogenesis"],"synonyms":[{"name":"blood vessel formation from pre-existing blood vessels","type":"exact"}],"termid":"GO:0001525"}


id: PBO:0016952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA Meu16","termid":"PBO:0016952"}


id: SO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The RNA component of Ribonuclease P (RNase P), a ubiquitous endoribonuclease, found in archaea, bacteria and eukarya as well as chloroplasts and mitochondria. Its best characterized activity is the generation of mature 5 prime ends of tRNAs by cleaving the 5 prime leader elements of precursor-tRNAs. Cellular RNase Ps are ribonucleoproteins. RNA from bacterial RNase Ps retains its catalytic activity in the absence of the protein subunit, i.e. it is a ribozyme. Isolated eukaryotic and archaeal RNase P RNA has not been shown to retain its catalytic function, but is still essential for the catalytic activity of the holoenzyme. Although the archaeal and eukaryotic holoenzymes have a much greater protein content than the bacterial ones, the RNA cores from all the three lineages are homologous. Helices corresponding to P1, P2, P3, P4, and P10/11 are common to all cellular RNase P RNAs. Yet, there is considerable sequence variation, particularly among the eukaryotic RNAs.","direct_ancestors":[{"relation_name":"is_a","term_name":"enzymatic_RNA","termid":"SO:0000372"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase_P_RNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:RNase_P_RNA","type":"exact"},{"name":"RNase P RNA","type":"exact"}],"termid":"SO:0000386"}


id: PBO:0073856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A5","termid":"PBO:0073856"}


id: PATO:0000763
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's being affected by loss of the ability to move a body part.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement behavioral quality","termid":"PATO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralysed","synonyms":[{"name":"palsy","type":"narrow"}],"termid":"PATO:0000763"}


id: GO:0051639
data:
  {"annotated_genes":["SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73201],"is_not":false,"summary":null,"term":"GO:0051639"}]},"cv_name":"biological_process","definition":"The assembly of a network of actin filaments; actin filaments on different axes and with differing orientations are crosslinked together to form a mesh of filaments.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"actin filament network formation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"actin gel biosynthesis","type":"exact"},{"name":"actin gel formation","type":"exact"}],"termid":"GO:0051639","terms_by_termid":{"GO:0051639":null}}


id: GO:0097188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts are deposited into the calcareous tooth structure known as dentin.","definition_xrefs":["GOC:sl","PMID:10206335","PMID:21196346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth mineralization","termid":"GO:0034505"},{"relation_name":"part_of","term_name":"dentinogenesis","termid":"GO:0097187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dentin mineralization","synonyms":[{"name":"dentine mineralization","type":"exact"}],"termid":"GO:0097188"}


id: PBO:0068488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 72, pseudogene","termid":"PBO:0068488"}


id: PBO:0042147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 5","termid":"PBO:0042147"}


id: MONDO:0011007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of classical diaphragmatic hernia (Bochdalek type) with severe lung hypoplasia, and variable associated malformations. It has been reported only once in four successive fetuses (two females and two males) born to a nonconsanguineous couple. The spectrum of malformations is wide and includes, besides diaphragmatic hernia and hypoplastic lungs (present in the four fetuses), omphalocele (one case), severe limb hypoplasia (two cases), syndactyly of the toes (two cases), extra spleen (one case), and an ossification defect of the skull (one case). Inheritance seems either to be autosomal recessive or due to a gonadal mosaicism in one parent. Prenatal diagnosis of diaphragmatic hernia and severe lung hypoplasia detected on ultrasonography made the parents opt for termination of the four pregnancies.","definition_xrefs":["GARD:0002397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic defect-limb deficiency-skull defect syndrome","secondary_identifiers":["OMIM:601163","MEDGEN:371377","Orphanet:2141","GARD:2397","MESH:C563380","SCTID:721095007","UMLS:C1832668"],"synonyms":[{"name":"diaphragmatic defect limb deficiency skull defect","type":"related"},{"name":"diaphragmatic defects, limb deficiencies, and ossification defects of skull","type":"related"},{"name":"froster syndrome","type":"related"},{"name":"froster-Huch syndrome","type":"exact"}],"termid":"MONDO:0011007","xrefs":{"Monarch":{"xref_id":"0011007"}}}


id: MOD:00912
data:
  {"annotated_genes":["SJAG_04149","SJAG_03914","SJAG_00937","SJAG_00432","SJAG_02450","SJAG_02205","SJAG_03861","SJAG_00464","SJAG_05230","SJAG_03671","SJAG_02766","SJAG_02972","SJAG_01766","SJAG_03641","SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00126"},{"annotations":[82392,82444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00123"},{"annotations":[82460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00127"},{"annotations":[82411,82560,82440,82453,82580,82405,82442,82306,82546,82301,82381,82491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00128"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-lysine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00432":null,"SJAG_00464":null,"SJAG_00937":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02450":null,"SJAG_02766":null,"SJAG_02972":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_04149":null,"SJAG_05230":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-lysine residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"ModLys","type":"exact"}],"termid":"MOD:00912","terms_by_termid":{"MOD:00123":null,"MOD:00126":null,"MOD:00127":null,"MOD:00128":null}}


id: PBO:0066537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 3","termid":"PBO:0066537"}


id: GO:2000854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of corticosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid secretion","termid":"GO:2000851"},{"relation_name":"is_a","term_name":"regulation of corticosterone secretion","termid":"GO:2000852"},{"relation_name":"positively_regulates","term_name":"corticosterone secretion","termid":"GO:0035934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of corticosterone secretion","termid":"GO:2000854"}


id: PBO:0070272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 7","termid":"PBO:0070272"}


id: PBO:0086919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc finger protein; YPR013C is not an essential gene","termid":"PBO:0086919"}


id: GO:0070149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling glutamate to glutamyl-tRNA in a mitochondrion, catalyzed by glutamyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamyl-tRNA aminoacylation","termid":"GO:0006424"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0006520","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA aminoacylation","termid":"GO:0070149"}


id: PBO:0085522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S24, no bacterial homolog; RPS24B has a paralog, RPS24A, that arose from the whole genome duplication","termid":"PBO:0085522"}


id: MONDO:0010161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tyrosinemia type 1 (HTI) is an inborn error of tyrosine catabolism caused by defective activity of fumarylacetoacetate hydrolase (FAH) and is characterized by progressive liver disease, renal tubular dysfunction, porphyria-like crises and a dramatic improvement in prognosis following treatment with nitisinone.","definition_xrefs":["Orphanet:882"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"excluded_subClassOf","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"tyrosinemia","termid":"MONDO:0004741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"tyrosinemia type I","secondary_identifiers":["NCIT:C98641","MedDRA:10069462","NANDO:2200468","GARD:2658","DOID:0050726","OMIM:276700","UMLS:C0268490","icd11.foundation:2029519782","MEDGEN:75688","SCTID:410056006","NANDO:1200788"],"synonyms":[{"name":"FAH deficiency","type":"exact"},{"name":"Fah deficiency","type":"related"},{"name":"TYRSN1","type":"related"},{"name":"Tyrosinemia Type 1","type":"exact"},{"name":"fumarylacetoacetase deficiency","type":"exact"},{"name":"fumarylacetoacetate hydrolase deficiency","type":"exact"},{"name":"hepatorenal tyrosinemia","type":"exact"},{"name":"type I tyrosinemia","type":"exact"},{"name":"tyrosinemia type 1","type":"related"},{"name":"tyrosinemia type I","type":"exact"},{"name":"tyrosinemia, type 1","type":"related"},{"name":"tyrosinemia, type I","type":"related"}],"termid":"MONDO:0010161","xrefs":{"Monarch":{"xref_id":"0010161"}}}


id: PBO:0068496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 80, pseudogene","termid":"PBO:0068496"}


id: MONDO:0007572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary familial polycythemia is an inherited hematological disorder resulting from mutations in the erythropoietin (EPO) receptor and is characterized by an elevated absolute red blood cell mass caused by uncontrolled red blood cell production in the presence of low EPO levels.","definition_xrefs":["Orphanet:90042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"primary familial polycythemia due to EPO receptor mutation","secondary_identifiers":["GARD:9843","ICD9:289.6","MEDGEN:1641215","icd11.foundation:962836252","UMLS:C4551637","OMIM:133100","SCTID:17342003","DOID:0060652"],"synonyms":[{"name":"ECYT1","type":"related"},{"name":"EPOR familial polycythemia","type":"exact"},{"name":"PFCP","type":"exact"},{"name":"autosomal dominant benign erythrocytosis","type":"related"},{"name":"congenital erythrocytosis due to erythropoietin receptor mutation","type":"exact"},{"name":"congenital polycythemia due to erythropoietin receptor mutation","type":"exact"},{"name":"erythrocytosis autosomal dominant benign","type":"related"},{"name":"erythrocytosis, autosomal dominant benign","type":"related"},{"name":"erythrocytosis, familial, 1","type":"exact"},{"name":"erythrocytosis, familial, type 1","type":"exact"},{"name":"erythrocytosis, somatic","type":"exact"},{"name":"familial erythrocytosis","type":"exact"},{"name":"familial erythrocytosis 1","type":"exact"},{"name":"familial erythrocytosis type 1","type":"exact"},{"name":"familial erythrocytosis, 1","type":"exact"},{"name":"familial polycythemia caused by mutation in EPOR","type":"exact"},{"name":"polycythemia, primary familial and congenital","type":"related"},{"name":"primary congenital erythrocytosis","type":"exact"},{"name":"primary familial and congenital polycythemia","type":"exact"},{"name":"primary familial polycythemia","type":"related"}],"termid":"MONDO:0007572","xrefs":{"Monarch":{"xref_id":"0007572"}}}


id: GO:0080181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the formation of branches in lateral roots.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"part_of","term_name":"lateral root morphogenesis","termid":"GO:0010102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root branching","termid":"GO:0080181"}


id: PBO:0001646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-P-Man dependent alpha(1-3) mannosyltransferase Alg3 (predicted)","termid":"PBO:0001646"}


id: PBO:0060053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 41","termid":"PBO:0060053"}


id: MONDO:1011639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"generalized myoclonic epilepsy with photosensitivity, non-human animal","secondary_identifiers":["OMIA:002095"],"termid":"MONDO:1011639","xrefs":{"Monarch":{"xref_id":"1011639"}}}


id: MONDO:0021836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by a malformations of the neck due to a branchial arch defect. In the neonatal period the following signs were noted: symmetrical preauricular pits, retroauricular additional rudimentary auricles, a blindly ending coccygeal groove, microstomia and papillomata of the hypopharynx. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:6468450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aksu von Stockhausen syndrome","secondary_identifiers":["MEDGEN:419676","UMLS:C2930949","MESH:C535611"],"synonyms":[{"name":"aksu von stockhausen syndrome","type":"exact"},{"name":"hereditary branchial arch defects","type":"related"}],"termid":"MONDO:0021836","xrefs":{"Monarch":{"xref_id":"0021836"}}}


id: MONDO:0009334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary elliptocytosis","termid":"MONDO:0017319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hemolytic anemia with thermal sensitivity of red cells","secondary_identifiers":["OMIM:235370","MEDGEN:343488","GARD:15179","UMLS:C1856158","MESH:C565522"],"synonyms":[{"name":"hemolytic anemia with thermal sensitivity of red cells","type":"exact"}],"termid":"MONDO:0009334","xrefs":{"Monarch":{"xref_id":"0009334"}}}


id: PBO:0029629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lagging_meiotic_chromosomes","termid":"PBO:0029629"}


id: PBO:0046934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 50 member B","termid":"PBO:0046934"}


id: PBO:0091030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp10","termid":"PBO:0091030"}


id: PBO:0069785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1071, pseudogene","termid":"PBO:0069785"}


id: GO:0035260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the internal genitalia are generated and organized. The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals.","definition_xrefs":["PMID:25247640","PMID:24793987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal genitalia morphogenesis","termid":"GO:0035260"}


id: PBO:0052724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 16","termid":"PBO:0052724"}


id: GO:0032684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of fractalkine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fractalkine production","termid":"GO:0032644"},{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"negatively_regulates","term_name":"fractalkine production","termid":"GO:0032603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fractalkine production","secondary_identifiers":["GO:0050753"],"synonyms":[{"name":"down regulation of fractalkine production","type":"exact"},{"name":"down-regulation of fractalkine production","type":"exact"},{"name":"downregulation of fractalkine production","type":"exact"},{"name":"inhibition of fractalkine production","type":"narrow"},{"name":"negative regulation of CX3CL1 biosynthesis","type":"narrow"},{"name":"negative regulation of CX3CL1 production","type":"exact"},{"name":"negative regulation of fractalkine biosynthetic process","type":"narrow"}],"termid":"GO:0032684"}


id: PR:P36589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc14 gene.","definition_xrefs":["UniProtKB:P36589","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.07","synonyms":[{"name":"Spom972h-cdc14","type":"exact"}],"termid":"PR:P36589"}


id: GO:0018101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of peptidyl-arginine to form peptidyl-citrulline.","definition_xrefs":["PMID:23175390","RESID:AA0214"],"gene_count":0,"genotype_count":0,"name":"obsolete protein citrullination (obsolete GO:0018101)","synonyms":[{"name":"deimination","type":"exact"},{"name":"peptidyl-citrulline anabolism from peptidyl-arginine","type":"exact"},{"name":"peptidyl-citrulline biosynthetic process from peptidyl-arginine","type":"exact"},{"name":"peptidyl-citrulline formation from peptidyl-arginine","type":"exact"},{"name":"peptidyl-citrulline synthesis from peptidyl-arginine","type":"exact"}],"termid":"GO:0018101"}


id: GO:1990604
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex of the endoplasmic reticulum membrane that consists of IRE1 (Inositol-requiring enzyme-1), TRAF2 (TNF receptor-associated factor 2) and ASK1 (Apoptosis signal-regulating kinase 1, a MAP3K).","definition_xrefs":["PMID:23000344","GOC:PARL","GOC:bf","PMID:12050113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005783","GO:0005789","GO:0005575"],"is_obsolete":false,"name":"IRE1-TRAF2-ASK1 complex","synonyms":[{"name":"ERN1-TRAF2-ASK1 complex","type":"related"}],"termid":"GO:1990604"}


id: PBO:0055208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2633","termid":"PBO:0055208"}


id: GO:0102264
data:
  {"annotated_genes":["SJAG_03236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106608],"is_not":false,"summary":null,"term":"GO:0102264"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil20 in tRNA + NAD(P) = H+ + a uracil20 in tRNA + NAD(P)H.","definition_xrefs":["GOC:pz","EC:1.3.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tRNA-dihydrouridine20 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12456"],"termid":"GO:0102264","terms_by_termid":{"GO:0102264":null}}


id: MONDO:0013091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liver PhK deficiency caused by variants in the PHKG2 gene","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to liver phosphorylase kinase deficiency","termid":"MONDO:0020693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0037792","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"glycogen storage disease IXc","secondary_identifiers":["NANDO:1200849","NANDO:2201166","GARD:18387","UMLS:C2751643","MEDGEN:442778","MESH:C567809","DOID:0111043","OMIM:613027"],"synonyms":[{"name":"GSD IXc","type":"related"},{"name":"GSD type 9C","type":"exact"},{"name":"GSD type IXc","type":"exact"},{"name":"GSD9C","type":"exact"},{"name":"PHKG2 glycogen storage disease","type":"exact"},{"name":"PHKG2-related glycogen storage disease type IX","type":"exact"},{"name":"glycogen storage disease IXc","type":"exact"},{"name":"glycogen storage disease caused by mutation in PHKG2","type":"exact"},{"name":"glycogen storage disease type IXc","type":"exact"}],"termid":"MONDO:0013091","xrefs":{"Monarch":{"xref_id":"0013091"}}}


id: PBO:0017814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic amino acid transmembrane transporter (predicted)","termid":"PBO:0017814"}


id: PBO:0003630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, involved in endocytic trafficking (predicted)","termid":"PBO:0003630"}


id: MOD:00516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)","type":"related"},{"name":"Hex1HexNAc2","type":"related"}],"termid":"MOD:00516"}


id: PBO:0078989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon TTA) 2-1","termid":"PBO:0078989"}


id: PBO:0051691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 antisense RNA 1","termid":"PBO:0051691"}


id: GO:1901585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of acid-sensing ion channel activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of acid-sensing ion channel activity (obsolete GO:1901585)","synonyms":[{"name":"regulation of ASIC activity","type":"exact"}],"termid":"GO:1901585"}


id: GO:0047202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-sinapoyl-beta-D-glucose + choline = O-sinapoylcholine + D-glucose.","definition_xrefs":["EC:2.3.1.91","RHEA:12024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-sinapoyltransferase activity","termid":"GO:0016753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"sinapoylglucose-choline O-sinapoyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.91-RXN","KEGG_REACTION:R03075"],"synonyms":[{"name":"1-O-(4-hydroxy-3,5-dimethoxycinnamoyl)-beta-D-glucose:choline 1-O-(4-hydroxy-3,5-dimethoxycinnamoyl)transferase activity","type":"related"},{"name":"sinapine synthase activity","type":"related"}],"termid":"GO:0047202"}


id: GO:0060765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the androgen receptor signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"regulates","term_name":"androgen receptor signaling pathway","termid":"GO:0030521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of androgen receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-5625886"],"synonyms":[{"name":"regulation of androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060765"}


id: GO:0071619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group onto a serine residue at position 2 within the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II. Typically, phosphorylation of serine 2 (Ser2) occurs subsequent to phosphorylation of serine 5 and is thus seen in the middle and 3' ends of genes. In vivo, Ser2 phosphorylation is primarily performed by CTDK-I in S. cerevisiae or CDK9 in metazoans.","definition_xrefs":["PMID:17079683","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (obsolete GO:0071619)","termid":"GO:0071619"}


id: MONDO:0021662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the intrahepatic or extrahepatic bile ducts. Representative examples of benign neoplasms include bile duct adenoma and extrahepatic bile duct lipoma. Representative examples of malignant neoplasms include intrahepatic and extrahepatic cholangiocarcinoma.","definition_xrefs":["NCIT:C2898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"},{"relation_name":"is_a","term_name":"biliary tract neoplasm","termid":"MONDO:0005304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile duct neoplasm","secondary_identifiers":["MESH:D001650","UMLS:C0005396","MEDGEN:14114"],"synonyms":[{"name":"bile duct neoplasm","type":"exact"},{"name":"bile duct neoplasm (disease)","type":"exact"},{"name":"bile duct tumor","type":"exact"},{"name":"bile duct tumour","type":"exact"},{"name":"intrahepatic and extrahepatic bile duct neoplasm","type":"exact"},{"name":"intrahepatic and extrahepatic bile duct tumor","type":"exact"},{"name":"intrahepatic and extrahepatic bile duct tumour","type":"exact"},{"name":"neoplasm of bile duct","type":"exact"},{"name":"tumor of bile duct","type":"exact"},{"name":"tumour of bile duct","type":"exact"}],"termid":"MONDO:0021662","xrefs":{"Monarch":{"xref_id":"0021662"}}}


id: MONDO:0004806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic inflammatory disorder of the lungs characterized by the presence of eosinophils in the interalveolar septa and alveolar spaces and peripheral blood eosinophilia. Chest x-rays reveal peripheral infiltrates. Approximately half of the patients have history of asthma or atopic disease. Signs and symptoms include fever, dyspnea, cough, and weight loss. Following treatment with corticosteroids, the eosinophilic infiltrates in the lungs disappear, resulting in dramatic clinical improvement.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eosinophilic pneumonia","termid":"MONDO:0005749"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic eosinophilic pneumonia","secondary_identifiers":["UMLS:C0008680","NCIT:C34471","DOID:9502","MEDGEN:3085","SCTID:233692000"],"synonyms":[{"name":"cryptogenic pulmonary eosinophilia","type":"exact"},{"name":"eosinophilic pneumonia, chronic","type":"exact"}],"termid":"MONDO:0004806","xrefs":{"Monarch":{"xref_id":"0004806"}}}


id: GO:0043712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxyisocaproate + isocaproyl-CoA = (R)-2-hydroxyisocaproyl-CoA + isocaproate.","definition_xrefs":["PMID:16957230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyisocaproate CoA-transferase activity","synonyms":[{"name":"(R)-2-hydroxyisocaproate CoA transferase activity","type":"exact"},{"name":"(R)-2-hydroxyisocaproate CoA-transferase activity","type":"exact"}],"termid":"GO:0043712"}


id: PBO:0091616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Isp5","termid":"PBO:0091616"}


id: GO:0008946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the exonucleolytic cleavage of oligonucleotides to yield nucleoside 5'-phosphates.","definition_xrefs":["EC:3.1.13.3"],"gene_count":0,"genotype_count":0,"name":"obsolete oligonucleotidase activity (obsolete GO:0008946)","secondary_identifiers":["MetaCyc:3.1.13.3-RXN"],"termid":"GO:0008946"}


id: PR:Q9Y7P6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug72 gene.","definition_xrefs":["UniProtKB:Q9Y7P6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 72 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1902.02","synonyms":[{"name":"Spom972h-mug72","type":"exact"}],"termid":"PR:Q9Y7P6"}


id: MONDO:0004968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myelomonocytic leukemia (obsolete MONDO:0004968)","termid":"MONDO:0004968","xrefs":{"Monarch":{"xref_id":"0004968"}}}


id: SO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for plastid LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_rRNA_gene","termid":"SO:0002366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_LSU_rRNA_gene","synonyms":[{"name":"plastid large subunit rRNA gene","type":"exact"}],"termid":"SO:0002367"}


id: PBO:0070968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 6","termid":"PBO:0070968"}


id: GO:0008984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-glutamate O(5)-methyl ester + H2O = protein L-glutamate + methanol.","definition_xrefs":["RESID:AA0072","EC:3.1.1.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylesterase activity","termid":"GO:0051723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein-glutamate methylesterase activity","secondary_identifiers":["MetaCyc:MCPMETEST-RXN","RHEA:23236"],"synonyms":[{"name":"CheB methylesterase activity","type":"narrow"},{"name":"chemotaxis-specific methylesterase activity","type":"narrow"},{"name":"methyl-accepting chemotaxis protein methyl-esterase activity","type":"narrow"},{"name":"methylesterase CheB activity","type":"narrow"},{"name":"protein-L-glutamate-5-O-methyl-ester acylhydrolase activity","type":"related"},{"name":"protein-L-glutamate-O5-methyl-ester acylhydrolase activity","type":"related"}],"termid":"GO:0008984"}


id: PBO:0028079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_phenotype","termid":"PBO:0028079"}


id: FYECO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which torin1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ torin1","synonyms":[{"name":"Torin1","type":"exact"}],"termid":"FYECO:0000390"}


id: MONDO:0012370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 11p13-p12.","definition_xrefs":["DOID:0110508","PMID:16158433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 51","secondary_identifiers":["OMIM:609941","UMLS:C1864968","MEDGEN:355880","MESH:C538202","GARD:9918"],"synonyms":[{"name":"DFNB51","type":"narrow"},{"name":"autosomal recessive deafness 51","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 51","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 51","type":"narrow"},{"name":"deafness, autosomal recessive 51","type":"narrow"}],"termid":"MONDO:0012370","xrefs":{"Monarch":{"xref_id":"0012370"}}}


id: PBO:0072706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1 pseudogene 3","termid":"PBO:0072706"}


id: GO:0006415
data:
  {"annotated_genes":["SJAG_02704","SJAG_03949","SJAG_03658","SJAG_02601","SJAG_00338","SJAG_00642","SJAG_05265","SJAG_02189","SJAG_01696","SJAG_04283","SJAG_01518","SJAG_00308","SJAG_00286","SJAG_05221","SJAG_02812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62687,79209],"is_not":false,"summary":null,"term":"GO:0006415"},{"annotations":[60773,118010,60359,98355,111109,111108,75600,96665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002184"},{"annotations":[97799,97362,100524,103966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070126"},{"annotations":[70286,78305,67807],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045905"},{"annotations":[75778],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006449"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).","definition_xrefs":["ISBN:019879276X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00308":null,"SJAG_00338":null,"SJAG_00642":null,"SJAG_01518":null,"SJAG_01696":null,"SJAG_02189":null,"SJAG_02601":null,"SJAG_02704":null,"SJAG_02812":null,"SJAG_03658":null,"SJAG_03949":null,"SJAG_04283":null,"SJAG_05221":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translational termination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006456","GO:0006443","Reactome:R-HSA-72764"],"synonyms":[{"name":"protein synthesis termination","type":"broad"},{"name":"translation termination","type":"exact"},{"name":"translational complex disassembly","type":"exact"}],"termid":"GO:0006415","terms_by_termid":{"GO:0002184":null,"GO:0006415":null,"GO:0006449":null,"GO:0045905":null,"GO:0070126":null}}


id: GO:0001934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"positive regulation of phosphorylation","termid":"GO:0042327"},{"relation_name":"positively_regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein phosphorylation","synonyms":[{"name":"activation of protein amino acid phosphorylation","type":"narrow"},{"name":"positive regulation of protein amino acid phosphorylation","type":"exact"},{"name":"stimulation of protein amino acid phosphorylation","type":"narrow"},{"name":"up regulation of protein amino acid phosphorylation","type":"exact"},{"name":"up-regulation of protein amino acid phosphorylation","type":"exact"},{"name":"upregulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001934"}


id: PBO:0042155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 16","termid":"PBO:0042155"}


id: MONDO:0012829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 3p21.3","definition_xrefs":["DOID:0110887","PMID:17804789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 12","secondary_identifiers":["MEDGEN:436861","OMIM:612241","MESH:C567388","UMLS:C2677105"],"synonyms":[{"name":"IBD12","type":"exact"},{"name":"inflammatory bowel disease 12","type":"exact"},{"name":"inflammatory bowel disease type 12","type":"exact"}],"termid":"MONDO:0012829","xrefs":{"Monarch":{"xref_id":"0012829"}}}


id: MONDO:0010426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked endothelial corneal dystrophy (XECD) is a rare subtype of posterior corneal dystrophy characterized by congenital ground glass corneal clouding or a diffuse corneal haze, and blurred vision in male patients.","definition_xrefs":["Orphanet:293621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal endothelial dystrophy","termid":"MONDO:0000766"},{"relation_name":"is_a","term_name":"posterior corneal dystrophy","termid":"MONDO:0020214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked endothelial corneal dystrophy","secondary_identifiers":["MESH:C567587","OMIM:300779","DOID:0060446","SCTID:718579008","MEDGEN:413518","icd11.foundation:1842066261","UMLS:C2749049","GARD:17339"],"synonyms":[{"name":"XECD","type":"exact"},{"name":"corneal dystrophy, endothelial, X-linked","type":"related"},{"name":"corneal dystrophy, endothelial, X-linked, X-linked dominant","type":"exact"},{"name":"endothelial corneal dystrophy, X-linked","type":"related"}],"termid":"MONDO:0010426","xrefs":{"Monarch":{"xref_id":"0010426"}}}


id: GO:0050173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-phenylalanine + ATP = N-adenylyl-L-phenylalanine + diphosphate + 2 H+.","definition_xrefs":["EC:2.7.7.54"],"gene_count":0,"genotype_count":0,"name":"obsolete phenylalanine adenylyltransferase activity (obsolete GO:0050173)","synonyms":[{"name":"ATP:L-phenylalanine adenylyltransferase activity","type":"related"},{"name":"ATP:phenylalanine adenylyltransferase activity","type":"exact"},{"name":"L-phenylalanine adenylyltransferase activity","type":"related"}],"termid":"GO:0050173"}


id: PBO:0086434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein, involved in vesicle formation; forms complex with Mst27p; member of DUP240 gene family; binds COPI and COPII vesicles; MST28 has a paralog, MST27, that arose from a segmental duplication","termid":"PBO:0086434"}


id: PBO:0051736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS6 antisense RNA 1","termid":"PBO:0051736"}


id: PBO:0077619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 10","termid":"PBO:0077619"}


id: GO:0099141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to protozoan","termid":"GO:0001562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to protozoan","termid":"GO:0099141"}


id: GO:0010630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA by a mechanism that selects the start site along that template.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transcription, start site selection","termid":"GO:0010630"}


id: GO:1903065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein localization to cell tip that is involved in positive regulation of establishment of cell polarity regulating cell shape.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:24554432"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape (obsolete GO:1903065)","synonyms":[{"name":"protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"}],"termid":"GO:1903065"}


id: MONDO:0018786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pontine autosomal dominant microangiopathy with leukoencephalopathy (obsolete MONDO:0018786)","termid":"MONDO:0018786","xrefs":{"Monarch":{"xref_id":"0018786"}}}


id: GO:0071030
data:
  {"annotated_genes":["SJAG_04768","SJAG_02622","SJAG_01331","SJAG_02005","SJAG_04500","SJAG_05243","SJAG_02382","SJAG_00456","SJAG_04025","SJAG_02879"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89298,90656,92621,94206,96861,108235,111208,111738,117533,120115],"is_not":false,"summary":null,"term":"GO:0071030"}]},"cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading incorrectly spliced pre-mRNAs within the nucleus.","definition_xrefs":["PMID:18644474","GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear mRNA surveillance","termid":"GO:0071028"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00456":null,"SJAG_01331":null,"SJAG_02005":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02879":null,"SJAG_04025":null,"SJAG_04500":null,"SJAG_04768":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"nuclear mRNA surveillance of spliceosomal pre-mRNA splicing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear RNA catabolic process of incorrectly spliced pre-mRNA","type":"exact"},{"name":"nuclear mRNA quality control of incorrectly spliced pre-mRNA","type":"exact"}],"termid":"GO:0071030","terms_by_termid":{"GO:0071030":null}}


id: GO:0009541
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A three dimensional regular lattice found in etioplasts. It is composed of a continuous system of tubules but when exposed to light the symmetrical arrangement is rapidly lost as tubules become pinched off into two dimensional sections of lattice. These for perforated sheets of membrane that move apart, extend and increase, finally establishing the typical granal and intergranal lamellae of the mature chloroplast.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"etioplast prolamellar body","termid":"GO:0009541"}


id: MONDO:0000162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Hashimoto thyroiditis","termid":"MONDO:0007699"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thyroid disease, susceptibility to","termid":"MONDO:0000162","xrefs":{"Monarch":{"xref_id":"0000162"}}}


id: PBO:0089405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational activator, zf-CCHC type zinc finger protein","termid":"PBO:0089405"}


id: PBO:0056368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 5","termid":"PBO:0056368"}


id: PBO:0073649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIK family kinase 3","termid":"PBO:0073649"}


id: GO:0019578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aldaric acid biosynthetic process","synonyms":[{"name":"aldaric acid anabolism","type":"exact"},{"name":"aldaric acid biosynthesis","type":"exact"},{"name":"aldaric acid formation","type":"exact"},{"name":"aldaric acid synthesis","type":"exact"}],"termid":"GO:0019578"}


id: GO:0014889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in the muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle atrophy","secondary_identifiers":["Wikipedia:Muscle_atrophy"],"termid":"GO:0014889"}


id: PBO:0051649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 4","termid":"PBO:0051649"}


id: PBO:0055197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2622","termid":"PBO:0055197"}


id: GO:0140034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon methylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"methylation-dependent protein binding","termid":"GO:0140034"}


id: GO:0019667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of L-alanine, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"},{"relation_name":"is_a","term_name":"L-alanine catabolic process","termid":"GO:0042853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"anaerobic L-alanine catabolic process","synonyms":[{"name":"L-alanine fermentation","type":"exact"}],"termid":"GO:0019667"}


id: MONDO:0009217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by pancytopenia, immune deficiency and cutaneous malignancies.","definition_xrefs":["DOID:0090066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi-like syndrome","secondary_identifiers":["MEDGEN:56237","SCTID:236469003","MESH:C536855","OMIM:227850","UMLS:C0151638"],"synonyms":[{"name":"Fanconi-like syndrome","type":"exact"}],"termid":"MONDO:0009217","xrefs":{"Monarch":{"xref_id":"0009217"}}}


id: MONDO:0021923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by bilateral anophthalmia (absence of one or both eyes), esophageal atresia (the upper esophagus ends and does not connect with the lower esophagus and stomach), and cryptorchidism (a condition in which one or both of the testes fail to descend from the abdomen into the scrotum). This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:1352427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal atresia","termid":"MONDO:0001044"},{"relation_name":"is_a","term_name":"cryptorchidism","termid":"MONDO:0009047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Arroyo Garcia Cimadevilla syndrome","secondary_identifiers":["MEDGEN:419817","MESH:C537439","UMLS:C2931494"],"synonyms":[{"name":"bilateral anophthalmia, esophageal atresia, and right cryptorchidism","type":"related"}],"termid":"MONDO:0021923","xrefs":{"Monarch":{"xref_id":"0021923"}}}


id: GO:0044014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2B L-lysine (position 5) = CoA + histone H2B N6-acetyl-L-lysine (position 5).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B acetyltransferase activity","termid":"GO:0044013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0034212","GO:0140096","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"histone H2BK5 acetyltransferase activity","synonyms":[{"name":"histone acetylase activity (H2B-K5 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H2B-K5 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H2B-K5 specific)","type":"exact"}],"termid":"GO:0044014"}


id: GO:1901833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trans-neoxanthin and 9'-cis-neoxanthin.","definition_xrefs":["GOC:yaf","MetaCyc:PWY-6809","PMID:11029576","UniPathway:UPA00388","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"all-trans-neoxanthin metabolic process","termid":"GO:1901831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"neoxanthin biosynthetic process","synonyms":[{"name":"all-trans-neoxanthin anabolism","type":"exact"},{"name":"all-trans-neoxanthin biosynthesis","type":"exact"},{"name":"all-trans-neoxanthin biosynthetic process","type":"narrow"},{"name":"all-trans-neoxanthin formation","type":"exact"},{"name":"all-trans-neoxanthin synthesis","type":"exact"},{"name":"neoxanthin anabolism","type":"exact"},{"name":"neoxanthin biosynthesis","type":"exact"},{"name":"neoxanthin formation","type":"exact"},{"name":"neoxanthin synthesis","type":"exact"}],"termid":"GO:1901833"}


id: PBO:0058063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4283-1","termid":"PBO:0058063"}


id: PBO:0083698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsilon subunit of the oligosaccharyltransferase complex; located in the ER lumen; catalyzes asparagine-linked glycosylation of newly synthesized proteins","termid":"PBO:0083698"}


id: PBO:0025533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-C ortholog Cnp3","termid":"PBO:0025533"}


id: FYPO:0000492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial genome maintenance is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial genome maintenance","termid":"FYPO:0000490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitochondrial genome maintenance","synonyms":[{"name":"decreased mitochondrial genome maintenance during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial genome maintenance during vegetative growth","type":"exact"},{"name":"mitochondrial genome maintenance: decreased","type":"related"},{"name":"reduced mitochondrial genome maintenance","type":"exact"}],"termid":"FYPO:0000492"}


id: SO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Edited mRNA sequence mediated by a single guide RNA (SO:0000602).","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"editing_block","synonyms":[{"name":"editing block","type":"exact"}],"termid":"SO:0000604"}


id: FYPO:0003481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and elongated, and in which mitosis begins when the cell is longer than normal.","definition_xrefs":["PMID:24013504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"output_of","term_name":"mitotic G2/M phase transition delay","termid":"FYPO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0005447","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable elongated vegetative cell, elongated upon mitotic entry","synonyms":[{"name":"viable elongated vegetative cell with entry into mitosis at increased length","type":"exact"},{"name":"viable elongated vegetative cell with mitotic entry at increased length","type":"exact"},{"name":"viable elongated vegetative cell, elongated upon entry into mitosis","type":"exact"}],"termid":"FYPO:0003481"}


id: GO:1901908
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine hexaphosphate.","definition_xrefs":["GOC:TermGenie","PMID:10090752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"diadenosine hexaphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"diadenosine hexaphosphate metabolism","type":"exact"},{"name":"diadenosyl hexaphosphate metabolic process","type":"exact"},{"name":"diadenosyl hexaphosphate metabolism","type":"exact"}],"termid":"GO:1901908","terms_by_termid":{"GO:1901909":null}}


id: GO:0005733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar RNA (obsolete GO:0005733)","synonyms":[{"name":"small nucleolar RNA","type":"exact"},{"name":"snoRNA","type":"exact"}],"termid":"GO:0005733"}


id: PR:O59727
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein PBDC1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.07c","synonyms":[{"name":"Spom972h-SPBC3E7.07c","type":"exact"}],"termid":"PR:O59727"}


id: PBO:0082391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta regulatory subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases","termid":"PBO:0082391"}


id: PBO:0030241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tunicamycin","termid":"PBO:0030241"}


id: GO:0061424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter and activates or increases the frequency, rate or extent of peroxisome organization.","definition_xrefs":["GOC:dph","PMID:7500953"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061424)","synonyms":[{"name":"positive regulation of peroxisome organisation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0061424"}


id: GO:0035545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the nervous system with respect to the left and right halves.","definition_xrefs":["GOC:kmv","PMID:19641012","PMID:17717195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of left/right asymmetry in nervous system","termid":"GO:0035545"}


id: PBO:0077210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 1","termid":"PBO:0077210"}


id: FYPO:0005473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate synthase activity using NADH as a cofactor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal glutamate synthase (NADH) activity","synonyms":[{"name":"normal L-glutamate synthase (NADH) activity","type":"exact"},{"name":"normal NADH-dependent glutamate synthase activity","type":"exact"},{"name":"normal NADH: GOGAT activity","type":"related"},{"name":"normal glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"}],"termid":"FYPO:0005473"}


id: PBO:0052494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 7","termid":"PBO:0052494"}


id: GO:1903355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of distal tip cell migration.","definition_xrefs":["GOC:mm2","GOC:TermGenie","PMID:24968003","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of distal tip cell migration","termid":"GO:1903354"},{"relation_name":"negatively_regulates","term_name":"distal tip cell migration","termid":"GO:0097628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of distal tip cell migration","synonyms":[{"name":"down regulation of distal tip cell migration","type":"exact"},{"name":"down-regulation of distal tip cell migration","type":"exact"},{"name":"downregulation of distal tip cell migration","type":"exact"},{"name":"inhibition of distal tip cell migration","type":"narrow"}],"termid":"GO:1903355"}


id: MONDO:1012649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of glycogen metabolism that occurs in horses due to a mutation in the GYS1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"},{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polysaccharide storage myopathy, type 1, horse","secondary_identifiers":["OMIA:001158-9796"],"synonyms":[{"name":"PSSM1","type":"exact"},{"name":"polysaccharide storage myopathy, GYS1-related, horse","type":"exact"}],"termid":"MONDO:1012649","xrefs":{"Monarch":{"xref_id":"1012649"}}}


id: GO:0102074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: OPC6-3-hydroxyacyl-CoA = OPC6-trans-2-enoyl-CoA + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.17"],"gene_count":0,"genotype_count":0,"name":"obsolete OPC6-trans-2-enoyl-CoA hydratase activity (obsolete GO:0102074)","termid":"GO:0102074"}


id: GO:0060775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) contributing to the interdigitation of cells along the mediolateral axis during gastrulation.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in gastrula mediolateral intercalation (obsolete GO:0060775)","termid":"GO:0060775"}


id: GO:0001898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the cytolysis by that organism of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytolysis by symbiont of host cells (obsolete GO:0001898)","synonyms":[{"name":"regulation by symbiont of cytolysis of host cells","type":"exact"}],"termid":"GO:0001898"}


id: GO:0060896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the neural plate to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate pattern specification","secondary_identifiers":["Reactome:R-HSA-9834899"],"termid":"GO:0060896"}


id: PBO:0061399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide C","termid":"PBO:0061399"}


id: FYPO:0005902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is decreased. Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["PomBase:mah","PMID:19570908","GO:0030048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based movement","termid":"FYPO:0005900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of actin filament-based movement","synonyms":[{"name":"decreased rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin filament-based movement during vegetative growth","type":"exact"},{"name":"reduced rate of actin filament-based movement","type":"exact"}],"termid":"FYPO:0005902"}


id: PR:Q9C0W3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP22H7.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0W3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein P22H7.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.04","synonyms":[{"name":"Spom972h-SPBP22H7.04","type":"exact"}],"termid":"PR:Q9C0W3"}


id: PBO:0061721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2F","termid":"PBO:0061721"}


id: GO:0030139
data:
  {"annotated_genes":["SJAG_01167","SJAG_00104","SJAG_00677","SJAG_02833","SJAG_03504","SJAG_02805","SJAG_03146","SJAG_01189","SJAG_00800"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77745,79952,95664,112641,117447],"is_not":false,"summary":null,"term":"GO:0030139"},{"annotations":[58550,76215,110272,80043],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.","definition_xrefs":["PMID:19696797","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00677":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01189":null,"SJAG_02805":null,"SJAG_02833":null,"SJAG_03146":null,"SJAG_03504":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"endocytic vesicle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1362520468"],"synonyms":[{"name":"endocytotic transport vesicle","type":"exact"},{"name":"endocytotic vesicle","type":"exact"}],"termid":"GO:0030139","terms_by_termid":{"GO:0030122":null,"GO:0030139":null}}


id: MONDO:1012703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive retinal atrophy that occurs in dogs due to a mutation in the CCDC66 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, CCDC66 related, dog","secondary_identifiers":["OMIA:001521-9615"],"synonyms":[{"name":"early onset progressive retinal atrophy, dog","type":"related"},{"name":"gPRA","type":"exact"},{"name":"generalized PRA, dog","type":"related"}],"termid":"MONDO:1012703","xrefs":{"Monarch":{"xref_id":"1012703"}}}


id: MONDO:0016905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 6q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the long arm (q) of chromosome 6. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 6q deletion include developmental delay, intellectual disability, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 6","termid":"MONDO:0016871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 6","secondary_identifiers":["GARD:3760","UMLS:C0795816","MEDGEN:162772","icd11.foundation:41692353","MESH:C537807","Orphanet:262047"],"synonyms":[{"name":"6q deletion","type":"related"},{"name":"6q monosomy","type":"related"},{"name":"chromosome 6q deletion","type":"related"},{"name":"deletion 6q","type":"related"},{"name":"monosomy 6q","type":"related"},{"name":"partial deletion of chromosome 6q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 6","type":"exact"},{"name":"partial monosomy 6q","type":"related"},{"name":"partial monosomy of chromosome 6q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 6","type":"exact"}],"termid":"MONDO:0016905","xrefs":{"Monarch":{"xref_id":"0016905"}}}


id: PBO:0043653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8 pseudogene 3","termid":"PBO:0043653"}


id: PBO:0029036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_surface","termid":"PBO:0029036"}


id: GO:0071880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase activity by adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adenylate cyclase activity by adrenergic receptor signalling pathway","type":"exact"},{"name":"adrenergic receptor, adenylate cyclase activating pathway","type":"exact"},{"name":"adrenergic receptor, adenylyl cyclase activating pathway","type":"exact"}],"termid":"GO:0071880"}


id: GO:1990863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of acinar cells, resulting in the expansion of a cell population. An acinar cell is a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini (singular acinus).","definition_xrefs":["PMID:9788538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acinar cell proliferation","synonyms":[{"name":"acinic cell proliferation","type":"exact"},{"name":"acinous cell proliferation","type":"exact"}],"termid":"GO:1990863"}


id: MONDO:0017864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pulmonary vein (PV) stenosis or atresia is a rare progressive life-threatening great vessels anomaly characterized by narrowing and obstruction of one or more normally positioned PV at their junction with the left atrium, that usually presents during early infancy with dyspnea, tachypnea, and repeated pulmonary infections, and eventually, when all PV of one lung are affected, results in pulmonary hypertension (PH) and consecutive pulmonary arterial hypertension (PAH). It may manifest as an isolated lesion or associated with other cardiac defects such as congenital pulmonary venous return anomaly and septal defects.","definition_xrefs":["Orphanet:3188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary veins atresia or stenosis","secondary_identifiers":["NANDO:2200273","icd11.foundation:469101490","MEDGEN:1826176","SCTID:234062003","GARD:4598","NANDO:1200964","UMLS:C5680865"],"synonyms":[{"name":"pulmonary vein stenosis","type":"related"},{"name":"pulmonary veins stenosis","type":"related"}],"termid":"MONDO:0017864","xrefs":{"Monarch":{"xref_id":"0017864"}}}


id: MONDO:0023079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal nevus vitamin D resistant rickets","termid":"MONDO:0023079","xrefs":{"Monarch":{"xref_id":"0023079"}}}


id: PBO:0070874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 5","termid":"PBO:0070874"}


id: PBO:0042031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 87","termid":"PBO:0042031"}


id: PBO:0056897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor 2","termid":"PBO:0056897"}


id: PBO:0109130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 2","termid":"PBO:0109130"}


id: PBO:0116273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pseudopeptidase; conserved fungal protein and member of the M14 family of metallocarboxypeptidases but contains substitutions in active site residues important for catalysis and lacks activity with standard substrates; contains a cleavable pro domain; required for normal cell wall assembly in some strains","termid":"PBO:0116273"}


id: PBO:0091808
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by C. albicans CAS5","termid":"PBO:0091808"}


id: PBO:0040585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-secretase 1","termid":"PBO:0040585"}


id: PBO:0074522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A14","termid":"PBO:0074522"}


id: MONDO:0002054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete breast cancer (obsolete MONDO:0002054)","termid":"MONDO:0002054","xrefs":{"Monarch":{"xref_id":"0002054"}}}


id: PBO:0044112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 75","termid":"PBO:0044112"}


id: PBO:0012270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 7 (predicted)","termid":"PBO:0012270"}


id: PBO:0073655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIM bHLH transcription factor 2","termid":"PBO:0073655"}


id: MONDO:0022805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colonic malakoplakia","secondary_identifiers":["MEDGEN:540762","UMLS:C0267536"],"termid":"MONDO:0022805","xrefs":{"Monarch":{"xref_id":"0022805"}}}


id: RO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contained_in","termid":"RO:0001018"}


id: PBO:0077660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF10A divergent transcript","termid":"PBO:0077660"}


id: GO:0030018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.","definition_xrefs":["GOC:mtg_muscle","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"I band","termid":"GO:0031674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Z disc","synonyms":[{"name":"Z band","type":"exact"},{"name":"Z disk","type":"exact"},{"name":"Z line","type":"exact"}],"termid":"GO:0030018"}


id: PBO:0051408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-40","termid":"PBO:0051408"}


id: PBO:0064100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 2","termid":"PBO:0064100"}


id: MONDO:0018106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary xanthinuria is a purine metabolism disorder due to inherited deficiency of the xanthine dehydrogenase/oxidase enzyme and is characterized by very low (or undetectable) concentrations of uric acid in blood and urine and very high concentration of xanthine in urine, leading to urolithiasis.","definition_xrefs":["Orphanet:3467"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"xanthinuria","termid":"MONDO:0000721"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"hereditary xanthinuria","secondary_identifiers":["ICD9:277.2","SCTID:54627004","DOID:0060236","UMLS:C5779508","HP:0010934","GARD:16628","MEDGEN:1830243","OMIMPS:278300"],"synonyms":[{"name":"classic xanthinuria","type":"exact"},{"name":"hereditary xanthinuria","type":"exact"},{"name":"xanthic urolithiasis","type":"exact"},{"name":"xanthine dehydrogenase deficiency","type":"exact"},{"name":"xanthine stone disease","type":"exact"},{"name":"xanthinuria","type":"related"}],"termid":"MONDO:0018106","xrefs":{"Monarch":{"xref_id":"0018106"}}}


id: FYPO:0005073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation occurs to a lower extent than normal along the chromosome arms.","definition_xrefs":["PomBase:mah","GO:1990892","PMID:21633354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic chromosome condensation","termid":"FYPO:0003286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000337","FYPO:0000293","FYPO:0001985","FYPO:0000641","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic chromosome arm condensation","synonyms":[{"name":"decreased chromosome arm condensation during mitotic cell cycle","type":"related"},{"name":"decreased mitotic chromosome arm chromatin condensation","type":"exact"},{"name":"decreased mitotic chromosome arm condensation during vegetative growth","type":"exact"},{"name":"decreased mitotic chromosome condensation along chromosome arms","type":"exact"},{"name":"reduced mitotic chromosome arm condensation","type":"exact"}],"termid":"FYPO:0005073"}


id: GO:1901555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paclitaxel stimulus.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete response to paclitaxel (obsolete GO:1901555)","termid":"GO:1901555"}


id: MONDO:0004951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The type species of lentivirus and the etiologic agent of acquired immunodeficiency syndrome (AIDS). It is characterized by its cytopathic effect and affinity for the T4-lymphocyte.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to HIV infection","secondary_identifiers":["OMIM:609423","MEDGEN:332156","NCIT:C14220","UMLS:C1836230"],"synonyms":[{"name":"AIDS, delayed/rapid progression to","type":"exact"},{"name":"AIDS, progression to","type":"related"},{"name":"AIDS, rapid progression to","type":"exact"},{"name":"AIDS, resistance to","type":"exact"},{"name":"AIDS, slow progression to","type":"exact"},{"name":"HIV infection, resistance to","type":"exact"},{"name":"HIV type 1, susceptibility to","type":"exact"},{"name":"HIV-1 disease, delayed progression of","type":"exact"},{"name":"HIV-1 disease, rapid progression of","type":"exact"},{"name":"HIV-1 viremia, susceptibility to","type":"exact"},{"name":"HIV-1, resistance to","type":"related"},{"name":"HIV-1, susceptibility to","type":"related"},{"name":"HIV/AIDS, susceptibility to","type":"exact"},{"name":"HIV1 infection, resistance to","type":"exact"},{"name":"HIV1, resistance to","type":"exact"},{"name":"acquired immunodeficiency syndrome, progression to","type":"related"},{"name":"human immunodeficiency virus type 1, resistance to","type":"related"},{"name":"human immunodeficiency virus type 1, susceptibility to","type":"related"},{"name":"rapid progression to AIDS from HIV1 infection","type":"exact"}],"termid":"MONDO:0004951","xrefs":{"Monarch":{"xref_id":"0004951"}}}


id: GO:0047010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,3R,4S)-3,4-dihydroxycyclohexane-1-carboxylate + NAD+ = (1S,4S)-4-hydroxy-3-oxocyclohexane-1-carboxylate + H+ + NADH.","definition_xrefs":["EC:1.1.1.166","RHEA:10516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydroxycyclohexanecarboxylate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05315","MetaCyc:1.1.1.166-RXN"],"synonyms":[{"name":"(-)t-3,t-4-dihydroxycyclohexane-c-1-carboxylate-NAD oxidoreductase activity","type":"related"},{"name":"(1S,3R,4S)-3,4-dihydroxycyclohexane-1-carboxylate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"dihydroxycyclohexanecarboxylate dehydrogenase activity","type":"related"}],"termid":"GO:0047010"}


id: MONDO:0004799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ulcerative blepharitis","secondary_identifiers":["ICD9:373.01","SCTID:91662004","DOID:9483","MEDGEN:509828","UMLS:C0155173"],"termid":"MONDO:0004799","xrefs":{"Monarch":{"xref_id":"0004799"}}}


id: PBO:0054359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1752","termid":"PBO:0054359"}


id: GO:0047689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate = D-aspartate.","definition_xrefs":["RHEA:14973","EC:5.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aspartate racemase activity","secondary_identifiers":["MetaCyc:ASPARTATE-RACEMASE-RXN","KEGG_REACTION:R00491"],"synonyms":[{"name":"D-aspartate racemase activity","type":"related"}],"termid":"GO:0047689"}


id: PR:Q9C0V9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32H8.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0V9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0589 protein C32H8.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.01c","synonyms":[{"name":"Spom972h-SPBC32H8.01c","type":"exact"}],"termid":"PR:Q9C0V9"}


id: MONDO:0006494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid disease (obsolete MONDO:0006494)","termid":"MONDO:0006494","xrefs":{"Monarch":{"xref_id":"0006494"}}}


id: PBO:0069056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 302, pseudogene","termid":"PBO:0069056"}


id: PBO:0060362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomesin 1","termid":"PBO:0060362"}


id: GO:0071342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the process in which a contractile ring is assembled in a specific location that contributes to cytokinesis during cell cycle.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of establishment of actomyosin contractile ring localization (obsolete GO:0071342)","termid":"GO:0071342"}


id: PBO:0083761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential kinetochore protein; component of the CBF3 complex that binds the CDEIII region of the centromere; contains an N-terminal Zn2Cys6 type zinc finger domain, a C-terminal acidic domain, and a putative coiled coil dimerization domain","termid":"PBO:0083761"}


id: MONDO:0975841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary gingival fibromatosis","termid":"MONDO:0016070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, 6","secondary_identifiers":["OMIM:620999"],"termid":"MONDO:0975841","xrefs":{"Monarch":{"xref_id":"0975841"}}}


id: MONDO:0006513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of breast cancer that is estrogen-receptor negative","definition_xrefs":["EFO:1000650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"estrogen-receptor negative breast cancer","secondary_identifiers":["DOID:0060076"],"synonyms":[{"name":"ER- breast cancer","type":"exact"}],"termid":"MONDO:0006513","xrefs":{"Monarch":{"xref_id":"0006513"}}}


id: GO:0060657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of mammary gland cord elongation as a result of a signal being created by a mesenchymal cell that is a precursor to the mammary fat and its subsequent reception and interpretation by an mammary cord epithelial cell.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"mammary gland cord elongation","termid":"GO:0060654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of mammary gland cord elongation by mammary fat precursor cell-epithelial cell signaling","synonyms":[{"name":"regulation of mammary gland cord elongation by mammary fat precursor cell-epithelial cell signalling","type":"exact"}],"termid":"GO:0060657"}


id: GO:0140865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-22 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:34755534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-22-mediated signaling pathway","synonyms":[{"name":"IL-22-mediated signaling pathway","type":"exact"},{"name":"interleukin-22-mediated signalling pathway","type":"exact"}],"termid":"GO:0140865"}


id: PBO:0078611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64B","termid":"PBO:0078611"}


id: PR:000041293
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A core histone that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core histone (Schizosaccharomyces pombe)","synonyms":[{"name":"Spom-coreHistone","type":"exact"}],"termid":"PR:000041293"}


id: MONDO:0010390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ocular albinism with late-onset sensorineural deafness (OASD), is a rare, X-linked inherited type of ocular albinism described in one African kindred (7 males over 3 generations) to date, characterized by severe visual impairment, translucent pale-blue iridies, a reduction in the retinal pigment and moderately severe deafness by middle age (fourth to fifth decade of life). It is unclear whether it is allelic to X-linked recessive ocular albinism or a contiguous gene syndrome.","definition_xrefs":["Orphanet:1000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular albinism","termid":"MONDO:0017304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"ocular albinism with late-onset sensorineural deafness","secondary_identifiers":["GARD:592","MEDGEN:337149","OMIM:300650","SCTID:722054007","UMLS:C1845069"],"synonyms":[{"name":"OASD","type":"related"},{"name":"albinism ocular late onset sensorineural deafness","type":"related"},{"name":"albinism, ocular, with late-onset sensorineural deafness","type":"related"},{"name":"deafness and ocular albinism","type":"related"},{"name":"ocular albinism with sensorineural deafness","type":"related"}],"termid":"MONDO:0010390","xrefs":{"Monarch":{"xref_id":"0010390"}}}


id: MONDO:0016871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 6 disorder","termid":"MONDO:0700013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 6","secondary_identifiers":["MEDGEN:1826013","UMLS:C5679654","GARD:20794","Orphanet:261791"],"synonyms":[{"name":"partial deletion of chromosome type 6","type":"exact"},{"name":"partial monosomy of chromosome 6","type":"exact"}],"termid":"MONDO:0016871","xrefs":{"Monarch":{"xref_id":"0016871"}}}


id: PBO:0040321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit epsilon","termid":"PBO:0040321"}


id: PBO:0050637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 2","termid":"PBO:0050637"}


id: PBO:0056966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 23c","termid":"PBO:0056966"}


id: GO:0075033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont partition is formed to separate the appressorium from the germination tube, occurring during appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete appressorium septum formation (obsolete GO:0075033)","synonyms":[{"name":"septum formation during appressorium formation on or near host","type":"related"},{"name":"septum formation involved in appressorium formation","type":"exact"},{"name":"septum formation involved in appressorium formation on or near host","type":"exact"}],"termid":"GO:0075033"}


id: PBO:0074423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 22","termid":"PBO:0074423"}


id: PR:Q9C0X8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp12 gene.","definition_xrefs":["UniProtKB:Q9C0X8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.07c","synonyms":[{"name":"Spom972h-rrp12","type":"exact"}],"termid":"PR:Q9C0X8"}


id: GO:0035201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and/or maintenance of a lineage boundary between anterior and posterior compartments of the leg disc that cells cannot cross, thus separating the populations of cells in each compartment.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior lineage restriction, imaginal disc","termid":"GO:0048099"},{"relation_name":"part_of","term_name":"leg disc anterior/posterior pattern formation","termid":"GO:0035200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leg disc anterior/posterior lineage restriction","termid":"GO:0035201"}


id: PBO:0030413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_purvalanol_A","termid":"PBO:0030413"}


id: PBO:0005485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf11","termid":"PBO:0005485"}


id: GO:0021686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar granular layer to attain its fully functional state. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["GOC:cls","ISBN:0838580343","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellar granular layer development","termid":"GO:0021681"},{"relation_name":"part_of","term_name":"cerebellar cortex maturation","termid":"GO:0021699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer maturation","termid":"GO:0021686"}


id: PR:O13948
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H4.05c gene.","definition_xrefs":["UniProtKB:O13948","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H4.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.05c","synonyms":[{"name":"Spom972h-SPAC23H4.05c","type":"exact"}],"termid":"PR:O13948"}


id: PBO:0034722
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydrogen peroxide induced Stress Regulator","termid":"PBO:0034722"}


id: MONDO:0011903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2J (CMT2J) is a form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy, characterized by a relatively late onset, pupillary abnormalities and deafness, in most patients, associated with distal weakness and muscle atrophy.","definition_xrefs":["Orphanet:99943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease dominant intermediate D","termid":"MONDO:0011909"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2J","secondary_identifiers":["UMLS:C1843153","GARD:9198","icd11.foundation:1498789307","MESH:C535417","SCTID:717014003","MEDGEN:375107","OMIM:607736","DOID:0110157"],"synonyms":[{"name":"CMT 2J","type":"related"},{"name":"CMT2J","type":"exact"},{"name":"Charcot Marie Tooth disease type 2J","type":"related"},{"name":"Charcot-Marie-Tooth disease type 2 with hearing loss and pupillary abnormalities","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2J","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2, with hearing loss and pupillary abnormalities","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2J","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2J","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2J","type":"related"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2J","type":"related"}],"termid":"MONDO:0011903","xrefs":{"Monarch":{"xref_id":"0011903"}}}


id: PR:P79081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diamine acetyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase ats1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.07c","secondary_identifiers":["UniProtKB:P79081"],"synonyms":[{"name":"Spom972h-SAT2","type":"exact"}],"termid":"PR:P79081"}


id: FYPO:0005317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 8 and 16 of histone H4 in subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:23851719"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H4-K8 and H4-K16 acetylation at subtelomere during vegetative growth (obsolete FYPO:0005317)","synonyms":[{"name":"increased histone H4 acetylation (K8 and K16) at subtelomere during vegetative growth","type":"exact"},{"name":"increased histone H4-K8 and H4-K16 acetylation at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K8 and H4-K16 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"increased histone H4K8/16 acetylation at subtelomere during vegetative growth","type":"exact"}],"termid":"FYPO:0005317"}


id: MONDO:0013282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-1-antitrypsin deficiency is a hereditary disease that develops in adulthood and is characterized by chronic liver disorders (cirrhosis), respiratory disorders (emphysema), and rarely panniculitis.","definition_xrefs":["Orphanet:60"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"plasma protein metabolism disease","termid":"MONDO:0002273"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"alpha 1-antitrypsin deficiency","secondary_identifiers":["MedDRA:10001806","NANDO:1200755","ICD9:273.4","SCTID:30188007","NCIT:C84397","MEDGEN:67461","GARD:5784","ICD10CM:E88.01","NANDO:2100174","OMIM:613490","UMLS:C0221757","MESH:D019896","DOID:13372","NANDO:2200611","NORD:754","icd11.foundation:824872160"],"synonyms":[{"name":"A-1ATD","type":"exact"},{"name":"A1AD","type":"exact"},{"name":"A1AT deficiency","type":"related"},{"name":"A1ATD","type":"related"},{"name":"AAT deficiency","type":"exact"},{"name":"AATD","type":"related"},{"name":"ALPHA-1-antitrypsin deficiency","type":"related"},{"name":"Alpha 1 antitrypsin deficiency","type":"related"},{"name":"Alpha-1 Antitrypsin Deficiency","type":"exact"},{"name":"Alpha-1 antitrypsin deficiency","type":"related"},{"name":"alpha 1-antitrypsin deficiency","type":"exact"},{"name":"alpha-1-antitrypsin deficiency","type":"related"},{"name":"deficiency in Alpa-1-proteinase inhibitor","type":"exact"},{"name":"emphysema due to AAT deficiency","type":"exact"},{"name":"emphysema-cirrhosis, due to AAT deficiency","type":"exact"},{"name":"hemorrhagic diathesis due to antithrombin pittsburgh","type":"exact"}],"termid":"MONDO:0013282","xrefs":{"Monarch":{"xref_id":"0013282"}}}


id: GO:0061983
data:
  {"annotated_genes":["SJAG_04508","SJAG_00486","SJAG_00646","SJAG_03989","SJAG_04271","SJAG_00666","SJAG_04853","SJAG_00207","SJAG_00678","SJAG_03090","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95674,89677],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[109652,107044,108762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007135"},{"annotations":[113646,89814,115198],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045144"},{"annotations":[102026,104186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[97022],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"A process that coontributes to the second meiotic division. The second meiotic division separates chromatids resulting in a haploid number of chromosomes.","definition_xrefs":["PMID:29385397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00207":null,"SJAG_00486":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00678":null,"SJAG_03090":null,"SJAG_03989":null,"SJAG_04271":null,"SJAG_04508":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiosis II cell cycle process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"second meiotic division","type":"exact"}],"termid":"GO:0061983","terms_by_termid":{"GO:0007135":null,"GO:0045144":null,"GO:0051456":null,"GO:1905191":null,"GO:1990950":null}}


id: PBO:0064897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B'gamma","termid":"PBO:0064897"}


id: MONDO:0015251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete balantidiasis (obsolete MONDO:0015251)","termid":"MONDO:0015251","xrefs":{"Monarch":{"xref_id":"0015251"}}}


id: PBO:0067791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 93","termid":"PBO:0067791"}


id: GO:2000336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial microparticle formation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood microparticle formation","termid":"GO:2000333"},{"relation_name":"is_a","term_name":"regulation of endothelial microparticle formation","termid":"GO:2000335"},{"relation_name":"negatively_regulates","term_name":"endothelial microparticle formation","termid":"GO:0072565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial microparticle formation","synonyms":[{"name":"negative regulation of endothelial microparticle generation","type":"exact"},{"name":"negative regulation of endothelial microparticle release","type":"exact"}],"termid":"GO:2000336"}


id: PATO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"magnitude","termid":"PATO:0002016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased magnitude","synonyms":[{"name":"high magnitude","type":"exact"}],"termid":"PATO:0002017"}


id: MONDO:0800167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Knobloch syndrome","termid":"MONDO:0800166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Knobloch syndrome 1","secondary_identifiers":["MEDGEN:1642123","MESH:C537209","ICD9:759.89","SCTID:703542000","GARD:380","OMIM:267750","Orphanet:1571","UMLS:C4551775"],"synonyms":[{"name":"KNO","type":"related"},{"name":"KNO1","type":"exact"},{"name":"KNOBLOCH syndrome 1","type":"exact"},{"name":"Knobloch syndrome type 1","type":"exact"},{"name":"Knobloch syndrome, type 1","type":"exact"},{"name":"Knobloch-Layer syndrome","type":"exact"},{"name":"myopia retinal detachment encephalocele","type":"related"},{"name":"retinal detachment and occipital encephalocele","type":"related"},{"name":"retinal detachment-occipital encephalocele syndrome","type":"exact"}],"termid":"MONDO:0800167","xrefs":{"Monarch":{"xref_id":"0800167"}}}


id: MONDO:0020441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Right superior vena cava connecting to the left-sided atrium is a rare, congenital vascular malformation of the major vessels characterized by the right SVC passing medially and dorsally to the aortic root and draining into the left atrium. Patients usually present a right-to-left systemic venous blood shunt which may manifest with arterial hypoxemia, cyanosis, exercise dyspnea, clubbing of the fingers, palpitations, murmurs and/or potentially fatal brain abscess. Association with other cardiac anomalies has been reported.","definition_xrefs":["Orphanet:99110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right superior vena cava connecting to left-sided atrium","secondary_identifiers":["GARD:19653","UMLS:C0344658","MEDGEN:576401"],"synonyms":[{"name":"right SVC connecting to left-sided atrium","type":"exact"},{"name":"right superior caval vein connecting to left-sided atrium","type":"exact"}],"termid":"MONDO:0020441","xrefs":{"Monarch":{"xref_id":"0020441"}}}


id: MONDO:0004254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"papillomatosis","termid":"MONDO:0021098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal intraductal papillomatosis","secondary_identifiers":["MEDGEN:272635","NCIT:C7365","UMLS:C1333626","DOID:7512"],"synonyms":[{"name":"focal intraductal papillomatosis","type":"exact"},{"name":"localised intraductal papillomatosis","type":"related"},{"name":"localized intraductal papillomatosis","type":"related"}],"termid":"MONDO:0004254","xrefs":{"Monarch":{"xref_id":"0004254"}}}


id: GO:0043855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a cyclic nucleotide has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cyclic nucleotide-activated monoatomic ion channel activity","synonyms":[{"name":"cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"cyclic nucleotide-gated ion channel activity","type":"broad"},{"name":"cyclic nucleotide-gated monoatomic ion channel activity","type":"exact"}],"termid":"GO:0043855"}


id: GO:0033024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a mast cell, a cell that is found in almost all tissues containing numerous basophilic granules and capable of releasing large amounts of histamine and heparin upon activation.","definition_xrefs":["GOC:mtg_apoptosis","PMID:11292031","GOC:add","PMID:12360215","PMID:16605130","CL:0000097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"},{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"},{"relation_name":"part_of","term_name":"mast cell homeostasis","termid":"GO:0033023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell apoptotic process","synonyms":[{"name":"apoptosis of mast cells","type":"exact"},{"name":"mast cell apoptosis","type":"narrow"}],"termid":"GO:0033024"}


id: PBO:0082960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; APCC(Cdh1) substrate; potentially phosphorylated by Cdc28p; YBR138C is not an essential gene","termid":"PBO:0082960"}


id: MONDO:0007639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fundus albipunctatus is a rare, genetic retinal dystrophy characterized by the presence of numerous small, round, yellowish-white retinal lesions that are distributed throughout the retina but spare the fovea. Patients present in childhood with non-progressive night blindness with prolonged cone and rod adaptation times. The macula may or may not be involved, which may result in a decrease of central visual acuity with age.","definition_xrefs":["Orphanet:227796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial flecked retinopathy","termid":"MONDO:0016420"},{"relation_name":"is_a","term_name":"RDH5-related retinopathy","termid":"MONDO:0100443"},{"relation_name":"is_a","term_name":"RLBP1-related retinopathy","termid":"MONDO:0100444"},{"relation_name":"is_a","term_name":"PRPH2-related retinopathy","termid":"MONDO:1040055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"fundus albipunctatus","secondary_identifiers":["MEDGEN:86317","DOID:11105","icd11.foundation:1981512475","ICD9:362.74","ICD10CM:H35.5","GARD:13809","SCTID:68222009","ICD9:362.76","MESH:C562733","OMIM:136880","UMLS:C0311338"],"synonyms":[{"name":"fundus albipunctatus","type":"exact"},{"name":"pigmentary retinal dystrophy","type":"exact"},{"name":"retinitis punctata albescens","type":"broad"}],"termid":"MONDO:0007639","xrefs":{"Monarch":{"xref_id":"0007639"}}}


id: FYPO:0005699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from the spindle pole body (SPB) normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal interphase microtubule nucleation","termid":"FYPO:0003326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal interphase microtubule nucleation from spindle pole body","synonyms":[{"name":"normal cytoplasmic microtubule nucleation from SPB during mitotic interphase","type":"exact"},{"name":"normal cytoplasmic microtubule nucleation from spindle pole body during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule nucleation from spindle pole body during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule nucleation from spindle pole body during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0005699"}


id: PBO:0065902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB43 pseudogene 1","termid":"PBO:0065902"}


id: PBO:0072506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 35","termid":"PBO:0072506"}


id: PATO:0002280
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's possessing a broad surface in articulation with another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"articulated with","termid":"PATO:0002278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"broadly articulated with","termid":"PATO:0002280"}


id: GO:0035169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized larval lymph gland-derived hemocyte precursor cell acquires the specialized features of the phagocytic blood-cell type, the plasmatocyte.","definition_xrefs":["GOC:bf","PMID:11921077","PMID:8174791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval lymph gland hemocyte differentiation","termid":"GO:0035168"},{"relation_name":"is_a","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymph gland plasmatocyte differentiation","synonyms":[{"name":"lymph gland plasmatocyte cell differentiation","type":"exact"}],"termid":"GO:0035169"}


id: RO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"before_or_simultaneous_with","termid":"RO:0002081"}


id: MONDO:0004594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary embolism","termid":"MONDO:0005279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"puerperal pulmonary embolism","secondary_identifiers":["UMLS:C0157540","DOID:8512","ICD9:673","ICD9:673.80","ICD9:673.81","SCTID:200284000","MEDGEN:510381"],"termid":"MONDO:0004594","xrefs":{"Monarch":{"xref_id":"0004594"}}}


id: PBO:0089188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein, nucleoside-triphosphate diphosphatase, human ASMTL ortholog","termid":"PBO:0089188"}


id: GO:0009704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The greening response of plants grown in the dark (etiolated) as a result of chloroplast biogenesis and the accumulation of chlorophyll.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"},{"relation_name":"part_of","term_name":"photomorphogenesis","termid":"GO:0009640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"de-etiolation","termid":"GO:0009704"}


id: GO:0050095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine + H+ = 3-methylthiopropanamine + CO2.","definition_xrefs":["EC:4.1.1.57","RHEA:17757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methionine decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R00656","MetaCyc:METHIONINE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"L-methionine carboxy-lyase (3-methylthiopropanamine-forming)","type":"related"},{"name":"L-methionine carboxy-lyase activity","type":"related"},{"name":"L-methionine decarboxylase activity","type":"related"}],"termid":"GO:0050095"}


id: PR:000044743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase dma1 (Schizosaccharomyces pombe) that lacks ubiquitinated lysine.","definition_xrefs":["PMID:29975113","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"E3 ubiquitin-protein ligase dma1","termid":"PR:000027845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dma1/UnUbiq","pombase_gene_id":"SPAC17G8.10c","synonyms":[{"name":"PomBase_original_PRO_term_name: E3 ubiquitin-protein ligase dma1 non-ubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-dma1/UnUbiq","type":"exact"},{"name":"dma1/UnUbiq","type":"exact"}],"termid":"PR:000044743"}


id: GO:0031025
data:
  {"annotated_genes":["SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104220],"is_not":false,"summary":null,"term":"GO:0031025"}]},"cv_name":"biological_process","definition":"The process in which the equatorial microtubule organizing center is disassembled at the end of mitosis.","definition_xrefs":["GOC:mah","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"equatorial microtubule organization","termid":"GO:0031121"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"equatorial microtubule organizing center disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equatorial microtubule organising center disassembly","type":"exact"}],"termid":"GO:0031025","terms_by_termid":{"GO:0031025":null}}


id: GO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of CD80, a CD marker that occurs on antigen presenting cells such as activated B cells and monocytes that provides a co-stimulatory signal necessary for T cell activation and survival.","definition_xrefs":["GOC:ebc","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete CD80 biosynthetic process (obsolete GO:0035780)","synonyms":[{"name":"CD80 anabolism","type":"exact"},{"name":"CD80 biosynthesis","type":"exact"},{"name":"CD80 formation","type":"exact"},{"name":"CD80 synthesis","type":"exact"}],"termid":"GO:0035780"}


id: PBO:0041093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRWD1 antisense RNA 1","termid":"PBO:0041093"}


id: GO:0031352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plastid inner membrane (obsolete GO:0031352)","synonyms":[{"name":"intrinsic to plastid inner membrane","type":"narrow"}],"termid":"GO:0031352"}


id: PBO:0079382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI","termid":"PBO:0079382"}


id: MONDO:1012131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"immunoglobulin G deficiency, non-human animal","termid":"MONDO:1011727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin G deficiency, chicken","secondary_identifiers":["OMIA:000554-9031"],"termid":"MONDO:1012131","xrefs":{"Monarch":{"xref_id":"1012131"}}}


id: PBO:0073080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex flavoprotein subunit A","termid":"PBO:0073080"}


id: GO:2000995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellodextrin metabolic process","termid":"GO:2000925"},{"relation_name":"is_a","term_name":"negative regulation of cell wall polysaccharide catabolic process","termid":"GO:2000967"},{"relation_name":"is_a","term_name":"regulation of mannan catabolic process","termid":"GO:2000994"},{"relation_name":"negatively_regulates","term_name":"mannan catabolic process","termid":"GO:0046355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mannan catabolic process","synonyms":[{"name":"negative regulation of mannan breakdown","type":"exact"},{"name":"negative regulation of mannan catabolism","type":"exact"},{"name":"negative regulation of mannan degradation","type":"exact"}],"termid":"GO:2000995"}


id: GO:0034620
data:
  {"annotated_genes":["SJAG_01768","SJAG_00564","SJAG_00681","SJAG_00226","SJAG_02601","SJAG_01516","SJAG_04103","SJAG_00530","SJAG_00790","SJAG_04567","SJAG_04118","SJAG_03482","SJAG_03611","SJAG_03841","SJAG_04435","SJAG_03815","SJAG_04283","SJAG_04471","SJAG_00403","SJAG_04262"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104827,111959,111960],"is_not":false,"summary":null,"term":"GO:0034620"},{"annotations":[72497,118765,119218,73049,69690,115780,116188,78137,116052,103129,118011,79035,100591,109105],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030968"},{"annotations":[68046,94939],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036498"},{"annotations":[79466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034514"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to unfolded protein","termid":"GO:0006986"},{"relation_name":"is_a","term_name":"cellular response to topologically incorrect protein","termid":"GO:0035967"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00564":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_01516":null,"SJAG_01768":null,"SJAG_02601":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03815":null,"SJAG_03841":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04471":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to unfolded protein","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"heat shock protein activity","type":"related"}],"termid":"GO:0034620","terms_by_termid":{"GO:0030968":null,"GO:0034514":null,"GO:0034620":null,"GO:0036498":null}}


id: SO:1001187
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is alternatively spliced.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"alternatively_spliced","termid":"SO:0000877"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternatively_spliced_transcript","synonyms":[{"name":"alternatively spliced transcript","type":"exact"}],"termid":"SO:1001187"}


id: PBO:0017666
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Capping enzyme Triphosphatase","termid":"PBO:0017666"}


id: PBO:0088379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokinetic formin Cdc12","termid":"PBO:0088379"}


id: GO:0070833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with an initial N-methylation with phospho-base phosphoethanolamine, followed by two downstream N-methylations on phosphatidyl-bases, phosphatidyl-N-methylethanolamine and phosphatidyl-N-dimethylethanolamine. The process ends with the conversion of a phosphatidyl-N-dimethylethanolamine to a phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY4FS-3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via CDP-N-methylethanolamine","termid":"GO:0070833"}


id: PBO:0053232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligatin","termid":"PBO:0053232"}


id: PBO:0040272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonal bHLH transcription factor 1","termid":"PBO:0040272"}


id: MONDO:0004720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A orthopoxvirus that causes a milder clinical syndrome than smallpox.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smallpox","termid":"MONDO:0004651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variola minor infection","secondary_identifiers":["MEDGEN:1393","ICD9:050.1","UMLS:C0001906","DOID:9153","NCIT:C34365","SCTID:72294005"],"synonyms":[{"name":"Variola minor","type":"exact"},{"name":"alastrim","type":"exact"},{"name":"cottonpox","type":"exact"},{"name":"milkpox","type":"exact"},{"name":"whitepox","type":"exact"}],"termid":"MONDO:0004720","xrefs":{"Monarch":{"xref_id":"0004720"}}}


id: GO:0061728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-mannose from mannose.","definition_xrefs":["GOC:dph","PMID:16339137","PMID:24218558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannose metabolic process","termid":"GO:0006013"},{"relation_name":"is_a","term_name":"GDP-mannose biosynthetic process","termid":"GO:0009298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"GDP-mannose biosynthetic process from mannose","termid":"GO:0061728"}


id: MONDO:0015596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-herpetic acute limbic encephalitis is a rare neuroinflammatory/neuroautoimmune disease characterized by an acute (or subacute) onset of disturbance of consciousness (occasionally presenting as convulsions) and high fever, associated with cerebral lesions (on magnetic resonance imaging) that are restricted to the limbic system (particularly the hippocampi and amygdalae), in the absence of viral, bacterial, fungal, paraneoplastic and other disorders.","definition_xrefs":["Orphanet:163924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limbic encephalitis","termid":"MONDO:0015588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-herpetic acute limbic encephalitis","secondary_identifiers":["MEDGEN:1646654","UMLS:C4707262","SCTID:764998005"],"termid":"MONDO:0015596","xrefs":{"Monarch":{"xref_id":"0015596"}}}


id: MONDO:0015167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of sporadic congenital anomalies, that occur in association with amniotic bands, involving the limbs, craniofacial regions, spine and trunk with a highly variable clinical spectrum ranging from simple digital band constriction (or amputation) to complex craniofacial, central nervous system and visceral anomalies.","definition_xrefs":["Orphanet:1034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"amniotic band syndrome","secondary_identifiers":["Orphanet:295000","icd11.foundation:1033549095","NORD:766","OMIM:217100","UMLS:C0220724","GARD:429","NCIT:C84552","MEDGEN:66322","SCTID:440214006","MESH:D000652"],"synonyms":[{"name":"Adam Complex","type":"related"},{"name":"Adam syndrome","type":"exact"},{"name":"CONSTRICTING bands, congenital","type":"related"},{"name":"Streeter anomaly","type":"related"},{"name":"Streeter dysplasia","type":"exact"},{"name":"amniotic band constriction","type":"exact"},{"name":"amniotic band sequence","type":"related"},{"name":"amniotic bands","type":"exact"},{"name":"amniotic bands sequence","type":"related"},{"name":"amniotic deformity-adhesion-mutilation syndrome","type":"exact"},{"name":"amputation, congenital","type":"related"},{"name":"congenital constricting bands","type":"related"},{"name":"congenital ring constrictions","type":"exact"},{"name":"constriction band syndrome","type":"exact"},{"name":"constriction rings syndrome","type":"exact"},{"name":"deformity due to amniotic band","type":"exact"},{"name":"familial amniotic bands","type":"related"},{"name":"terminal transverse defects of arm","type":"related"}],"termid":"MONDO:0015167","xrefs":{"Monarch":{"xref_id":"0015167"}}}


id: GO:0021610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the facial nerve is generated and organized. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.","definition_xrefs":["ISBN:0838580343","GOC:cls","GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"facial nerve development","termid":"GO:0021561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nerve morphogenesis","synonyms":[{"name":"CN VII morphogenesis","type":"related"}],"termid":"GO:0021610"}


id: PBO:0049551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 13","termid":"PBO:0049551"}


id: GO:2000902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellooligosaccharide metabolic process","synonyms":[{"name":"cellooligosaccharide metabolism","type":"exact"}],"termid":"GO:2000902"}


id: PBO:0056677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2B","termid":"PBO:0056677"}


id: GO:1990931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative demethylation of N6-methyladenosine RNA, with concomitant decarboxylation of 2-oxoglutarate and releases oxidized methyl group on N6-methyladenosine as formaldehyde.","definition_xrefs":["PMID:26458103","PMID:22002720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidative RNA demethylase activity","termid":"GO:0035515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"mRNA N6-methyladenosine dioxygenase activity","secondary_identifiers":["EC:1.14.11.53","RHEA:49520"],"synonyms":[{"name":"RNA N6-methyladenosine dioxygenase activity","type":"related"},{"name":"mRNA N(6)-methyladenine demethylase","type":"exact"},{"name":"mRNA N(6)-methyladenosine dioxygenase activity","type":"exact"}],"termid":"GO:1990931"}


id: MONDO:0000111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly syndrome, Guadalajara","termid":"MONDO:0000111","xrefs":{"Monarch":{"xref_id":"0000111"}}}


id: PBO:0090617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF4E-associated protein Eap1","termid":"PBO:0090617"}


id: PBO:0052061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 2A","termid":"PBO:0052061"}


id: GO:1990589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex consisting of ATF4 and CREB1 subunits that is capable of binding to cAMP response element (CRE) (consensus: 5'-GTGACGT[AC][AG]-3') as part of the positive regulation of transcription. Regulatory targets include the GRP78 (HSPA5) promoter in humans, whose activation by this complex is part of the ER stress response pathway.","definition_xrefs":["GOC:bhm","PMID:12871976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ATF4-CREB1 transcription factor complex","termid":"GO:1990589"}


id: MONDO:0017307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of phenylalanine and tyrosine metabolism","termid":"MONDO:0019235"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"disorder of tyrosine metabolism","secondary_identifiers":["GARD:21127","UMLS:C0268482","Orphanet:284818","icd11.foundation:1842978338","ICD9:270.2","SCTID:37200009","MEDGEN:541330"],"termid":"MONDO:0017307","xrefs":{"Monarch":{"xref_id":"0017307"}}}


id: PBO:0063550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penta-EF-hand domain containing 1","termid":"PBO:0063550"}


id: FYPO:0002336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin silencing at silent mating-type cassette","synonyms":[{"name":"normal chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"normal chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0002336"}


id: GO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine = D-serine.","definition_xrefs":["RHEA:10980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"serine racemase activity","secondary_identifiers":["Reactome:R-HSA-9014766","MetaCyc:5.1.1.18-RXN","EC:5.1.1.18"],"termid":"GO:0030378"}


id: PBO:0077076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIAM1 antisense RNA 1","termid":"PBO:0077076"}


id: PBO:0081243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 12","termid":"PBO:0081243"}


id: PBO:0059250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L19","termid":"PBO:0059250"}


id: PBO:0090738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin binding FHA domain protein Tos4","termid":"PBO:0090738"}


id: GO:0071720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of prostaglandins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin transport","termid":"GO:0015732"},{"relation_name":"is_a","term_name":"sodium-independent icosanoid transport","termid":"GO:0071718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"sodium-independent prostaglandin transport","termid":"GO:0071720"}


id: MONDO:0022895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis cleft lip palate arthrogryposis","secondary_identifiers":["GARD:1590"],"termid":"MONDO:0022895","xrefs":{"Monarch":{"xref_id":"0022895"}}}


id: GO:0062234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of platelet activating factor, 2-O-acetyl-1-O-octadecyl-sn-glycero-3-phosphocholine.","definition_xrefs":["PMID:16371369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether catabolic process","termid":"GO:0044269"},{"relation_name":"is_a","term_name":"platelet activating factor metabolic process","termid":"GO:0046469"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"platelet activating factor catabolic process","synonyms":[{"name":"2-O-acetyl-1-O-octadecyl-sn-glycero-3-phosphocholine catabolic process","type":"exact"},{"name":"PAF catabolic process","type":"related"}],"termid":"GO:0062234"}


id: PBO:0059431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A2","termid":"PBO:0059431"}


id: GO:1990593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nascent polypeptide-associated complex, a heterodimeric protein complex that can reversibly bind to ribosomes and is located in direct proximity to newly synthesized polypeptide chains as they emerge from the ribosome.","definition_xrefs":["PMID:25487825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nascent polypeptide-associated complex binding","synonyms":[{"name":"NAC binding","type":"exact"},{"name":"NACA binding","type":"exact"}],"termid":"GO:1990593"}


id: PBO:0060412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 40, NatD catalytic subunit","termid":"PBO:0060412"}


id: PBO:0073579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 1","termid":"PBO:0073579"}


id: MONDO:0018777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant preaxial polydactyly-upperback hypertrichosis syndrome","secondary_identifiers":["MEDGEN:1800225","Orphanet:476119","UMLS:C5568802","GARD:21953"],"termid":"MONDO:0018777","xrefs":{"Monarch":{"xref_id":"0018777"}}}


id: MONDO:0015011
data:
  {"annotated_genes":["SJAG_01816"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88648],"is_not":false,"summary":null,"term":"MONDO:0015011"}]},"cv_name":"mondo","definition":"Any autosomal recessive isolated optic atrophy in which the cause of the disease is a mutation in the YME1L1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111436","OMIM:617302","MEDGEN:934595","UMLS:C4310628","GARD:18201"],"synonyms":[{"name":"OPA11","type":"exact"},{"name":"YME1L1 autosomal recessive isolated optic atrophy","type":"exact"},{"name":"autosomal recessive isolated optic atrophy caused by mutation in YME1L1","type":"exact"},{"name":"optic atrophy 11","type":"exact"},{"name":"optic atrophy type 11","type":"exact"}],"termid":"MONDO:0015011","terms_by_termid":{"MONDO:0015011":null},"xrefs":{"Monarch":{"xref_id":"0015011"}}}


id: FYPO:0006526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiosis II","synonyms":[{"name":"abnormal second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006526"}


id: GO:0009375
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the oxidation of reduced ferredoxin. Hydrogenase contains iron-sulfur clusters, and some contain nickel; it can use molecular hydrogen for the reduction of a variety of substances.","definition_xrefs":["PMID:12792025","PMID:9836629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ferredoxin hydrogenase complex","termid":"GO:0009375"}


id: MONDO:0100042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac conduction defect","secondary_identifiers":["MEDGEN:78114","NCIT:C78245","OMIM:115080","UMLS:C0264886"],"synonyms":[{"name":"cardiac conduction disorder","type":"broad"},{"name":"conduction disorder","type":"broad"},{"name":"disorder of cardiac conduction","type":"broad"},{"name":"heart conduction disorder","type":"broad"}],"termid":"MONDO:0100042","xrefs":{"Monarch":{"xref_id":"0100042"}}}


id: GO:0005583
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any triple helical collagen trimer that forms fibrils.","definition_xrefs":["ISBN:0721639976","PMID:21421911","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"fibrillar collagen","termid":"GO:0098643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"fibrillar collagen trimer","termid":"GO:0005583"}


id: PBO:0090153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytochrome c-heme linkage protein Cyc2","termid":"PBO:0090153"}


id: PBO:0069942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1235, pseudogene","termid":"PBO:0069942"}


id: MONDO:0850198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma that is characterized as a molecular subtype that is not associated with activation of the WNT pathway or sonic hedgehog (SHH) pathway and TP53 mutations are absent.","definition_xrefs":["DOID:0080706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma non-WNT/non-SHH","secondary_identifiers":["UMLS:C4330667","MEDGEN:1387799","NCIT:C129444"],"termid":"MONDO:0850198","xrefs":{"Monarch":{"xref_id":"0850198"}}}


id: PBO:0050214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 31","termid":"PBO:0050214"}


id: PBO:0090541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase/chaperone Afg1","termid":"PBO:0090541"}


id: PBO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ste11","termid":"PBO:0000896"}


id: PBO:0052928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-11, pseudogene","termid":"PBO:0052928"}


id: PBO:0005776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit, SAP128 family (predicted)","termid":"PBO:0005776"}


id: FYPO:0004464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to camptothecin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to camptothecin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to CPT","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to camptothecin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to camptothecin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to camptothecin","type":"exact"}],"termid":"FYPO:0004464"}


id: GO:0030803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclic nucleotide biosynthetic process (obsolete GO:0030803)","synonyms":[{"name":"down regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"inhibition of cyclic nucleotide biosynthetic process","type":"narrow"},{"name":"negative regulation of cyclic nucleotide anabolism","type":"exact"},{"name":"negative regulation of cyclic nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of cyclic nucleotide formation","type":"exact"},{"name":"negative regulation of cyclic nucleotide synthesis","type":"exact"}],"termid":"GO:0030803"}


id: MONDO:0008656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign paroxysmal positional nystagmus (obsolete MONDO:0008656)","termid":"MONDO:0008656","xrefs":{"Monarch":{"xref_id":"0008656"}}}


id: GO:0044843
data:
  {"annotated_genes":["SJAG_01000","SJAG_03681","SJAG_01187","SJAG_00100","SJAG_03160","SJAG_00071","SJAG_00169","SJAG_03591","SJAG_03048","SJAG_02810","SJAG_01401","SJAG_04140","SJAG_01210","SJAG_03699","SJAG_00991","SJAG_01825","SJAG_02404","SJAG_02723","SJAG_00996","SJAG_05346","SJAG_01311","SJAG_02026"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75876,113998,110299,80191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000082"},{"annotations":[104256,90763,103517,110836,117885],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031568"},{"annotations":[111622,93141],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031571"},{"annotations":[100751,93998,93579,95169],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000134"},{"annotations":[108584,107898,111134,119063,104271,107735],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900087"},{"annotations":[117887,76736,93585,78494,110842,117320],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell in G1 phase commits to S phase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00100":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01187":null,"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02026":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044843","terms_by_termid":{"GO:0000082":null,"GO:0007089":null,"GO:0031568":null,"GO:0031571":null,"GO:1900087":null,"GO:2000134":null}}


id: PBO:0057410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548l","termid":"PBO:0057410"}


id: PBO:0056725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix extracellular phosphoglycoprotein","termid":"PBO:0056725"}


id: PBO:0069716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 996, pseudogene","termid":"PBO:0069716"}


id: PBO:0005202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase P5 type (predicted)","termid":"PBO:0005202"}


id: PBO:0049126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member C","termid":"PBO:0049126"}


id: MONDO:0013383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 3","secondary_identifiers":["MESH:C538121","OMIM:613711","UMLS:C3150974","MEDGEN:462324"],"synonyms":[{"name":"GDNF Hirschsprung disease","type":"exact"},{"name":"HSCR3","type":"related"},{"name":"Hirschsprung disease caused by mutation in GDNF","type":"exact"},{"name":"Hirschsprung disease modifier","type":"related"},{"name":"Hirschsprung disease type 3","type":"related"},{"name":"Hirschsprung disease, susceptibility to, 3","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to Hirschsprung disease 3","type":"related"}],"termid":"MONDO:0013383","xrefs":{"Monarch":{"xref_id":"0013383"}}}


id: PBO:0057119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 203b","termid":"PBO:0057119"}


id: PBO:0018023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter, predicted Meu22","termid":"PBO:0018023"}


id: GO:0102930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + 4-hydroxybenzoic acid = 3-geranyl-4-hydroxybenzoate + diphosphoric acid.","definition_xrefs":["RHEA:27854","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate geranyltransferase activity","secondary_identifiers":["EC:2.5.1.93","MetaCyc:RXN-8920"],"termid":"GO:0102930"}


id: PBO:0065195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 6","termid":"PBO:0065195"}


id: GO:1901497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diphenyl ether stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diphenyl ether","termid":"GO:1901497"}


id: MONDO:0004153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal carcinoma that arises from the central nervous system and occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood central nervous system germ cell tumor","termid":"MONDO:0003750"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"},{"relation_name":"is_a","term_name":"embryonal carcinoma of the central nervous system","termid":"MONDO:0018843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood central nervous system embryonal carcinoma","secondary_identifiers":["MEDGEN:277988","DOID:7231","UMLS:C1377605","NCIT:C6208"],"synonyms":[{"name":"childhood CNS embryonal cell carcinoma","type":"exact"},{"name":"childhood central nervous system embryonal carcinoma","type":"exact"},{"name":"childhood embryonal carcinoma of the central nervous system","type":"exact"},{"name":"embryonal carcinoma of childhood CNS","type":"exact"},{"name":"embryonal carcinoma of childhood central nervous system","type":"exact"},{"name":"embryonal carcinoma of paediatric CNS","type":"exact"},{"name":"embryonal carcinoma of paediatric central nervous system","type":"exact"},{"name":"embryonal carcinoma of pediatric CNS","type":"exact"},{"name":"embryonal carcinoma of pediatric central nervous system","type":"exact"},{"name":"embryonal carcinoma of the central nervous system of childhood","type":"exact"},{"name":"embryonal carcinoma of the childhood CNS","type":"exact"},{"name":"embryonal carcinoma of the childhood central nervous system","type":"exact"},{"name":"embryonal carcinoma of the paediatric CNS","type":"exact"},{"name":"embryonal carcinoma of the paediatric central nervous system","type":"exact"},{"name":"embryonal carcinoma of the pediatric CNS","type":"exact"},{"name":"embryonal carcinoma of the pediatric central nervous system","type":"exact"},{"name":"paediatric CNS embryonal cell carcinoma","type":"related"},{"name":"paediatric central nervous system embryonal carcinoma","type":"exact"},{"name":"paediatric embryonal carcinoma of the central nervous system","type":"exact"},{"name":"pediatric CNS embryonal cell carcinoma","type":"related"},{"name":"pediatric central nervous system embryonal carcinoma","type":"exact"},{"name":"pediatric embryonal carcinoma of the central nervous system","type":"exact"}],"termid":"MONDO:0004153","xrefs":{"Monarch":{"xref_id":"0004153"}}}


id: PBO:0039312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 6","termid":"PBO:0039312"}


id: PBO:0066508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X5","termid":"PBO:0066508"}


id: PBO:0000673
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.29","termid":"PBO:0000673"}


id: MONDO:1011411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, non-human animal","secondary_identifiers":["OMIA:001056"],"termid":"MONDO:1011411","xrefs":{"Monarch":{"xref_id":"1011411"}}}


id: MONDO:0033927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic complex vascular malformation with associated anomalies (obsolete MONDO:0033927)","secondary_identifiers":["Orphanet:459537"],"termid":"MONDO:0033927","xrefs":{"Monarch":{"xref_id":"0033927"}}}


id: MONDO:0010595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sertoli cell-only syndrome (obsolete MONDO:0010595)","secondary_identifiers":["EFO:1001422"],"termid":"MONDO:0010595","xrefs":{"Monarch":{"xref_id":"0010595"}}}


id: GO:0006148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine metabolic process","termid":"GO:0046102"},{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"inosine catabolic process","synonyms":[{"name":"inosine breakdown","type":"exact"},{"name":"inosine catabolism","type":"exact"},{"name":"inosine degradation","type":"exact"}],"termid":"GO:0006148"}


id: FYPO:0001905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the number, structure, and orientation of microtubules in the mitotic spindle are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic spindle microtubules","synonyms":[{"name":"normal mitotic spindle microtubules during vegetative growth","type":"exact"},{"name":"normal spindle microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001905"}


id: PBO:0067322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 413, pseudogene","termid":"PBO:0067322"}


id: PBO:0050716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 2","termid":"PBO:0050716"}


id: MONDO:0100283
data:
  {"annotated_genes":["SJAG_03067","SJAG_00289","SJAG_02723","SJAG_05346","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88423,88424,88426,88425,88422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011818"},{"annotations":[87825,87826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014716"}]},"cv_name":"mondo","definition":"A disease caused by mosaic gain-of-function (GoF) of several genes in the MTOR pathway (MTOR, PIK3CA, PIK3R2 and AKT3) are functionally the same despite significant phenotypic variability. These GoF variants result in overgrowth due to an over-activation of key genes in this pathway. The phenotypic variability is generally attributed to the mosaic fraction and affected tissue types. For example, macrocephaly is noted if the variant is identified in the brain, but non symmetric overgrowth of that limb is noted when the variant is only present in the affected limb. The pathologies of the affected tissue often reveal similar characteristics such as cellular overgrowth. However, this is not always the case especially with focal cortical dysplasia. At times the characteristics pathologies are not present in the tissue but sampling biases are an issue. FCD resections often involve a very small area and so a very small amount of tissue is available for pathology and it is not guaranteed that lesional tissue is sent. Therefore, having a single disease term which can encompass the phenotypic variability yet provide a unifying molecular diagnosis name makes sense given the common functional mechanism.","definition_xrefs":["PMID:22729223","PMID:30349109","PMID:27860216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","type":"exact"}],"termid":"MONDO:0100283","terms_by_termid":{"MONDO:0011818":null,"MONDO:0014716":null},"xrefs":{"Monarch":{"xref_id":"0100283"}}}


id: PBO:0080223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasoactive intestinal peptide receptor 2","termid":"PBO:0080223"}


id: PBO:0071195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 36","termid":"PBO:0071195"}


id: GO:0051866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"General adaptation syndrome is the set of changes in various organ systems of the body, especially the pituitary-endocrine system, in response to a wide range of strong external stimuli, both physiological and psychological. It is described as having three stages: alarm reaction, where the body detects the external stimulus; adaptation, where the body engages defensive countermeasures against the stressor; and exhaustion, where the body begins to run out of defenses.","definition_xrefs":["PMID:14847556","Wikipedia:General_adaptation_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal response to stress","termid":"GO:0033555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"general adaptation syndrome","secondary_identifiers":["GO:0051868"],"synonyms":[{"name":"general adaptation syndrome, physiological process","type":"exact"},{"name":"general adaptation syndrome, physiological response","type":"exact"},{"name":"physiological process during general adaptation syndrome","type":"exact"},{"name":"physiological response during general adaptation syndrome","type":"exact"}],"termid":"GO:0051866"}


id: PBO:0031081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_metabolism_phenotype","termid":"PBO:0031081"}


id: GO:1901009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (S)-scoulerine.","definition_xrefs":["GOC:yaf","PMID:15672841","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid biosynthetic process","termid":"GO:0033075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(S)-scoulerine biosynthetic process","synonyms":[{"name":"(S)-scoulerine anabolism","type":"exact"},{"name":"(S)-scoulerine biosynthesis","type":"exact"},{"name":"(S)-scoulerine formation","type":"exact"},{"name":"(S)-scoulerine synthesis","type":"exact"}],"termid":"GO:1901009"}


id: PBO:0047696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR2 antisense RNA 1","termid":"PBO:0047696"}


id: MONDO:0016659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"8p23.1 duplication syndrome is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 8, with a highly variable phenotype, principally characterized by mild to moderate developmental delay, intellectual disability, mild facial dysmorphism (incl. prominent forehead, arched eyebrows, broad nasal bridge, upturned nares, cleft lip and/or palate) and congenital cardiac anomalies (e.g., atrioventricular septal defect). Other reported features include macrocephaly, behavioral abnormalities (e.g., attention deficit disorder), seizures, hypotonia and ocular and digital anomalies (poly/syndactyly).","definition_xrefs":["Orphanet:251076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 8","termid":"MONDO:0016945"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8p23.1 duplication syndrome","secondary_identifiers":["SCTID:765140006","MEDGEN:1645138","GARD:10304","UMLS:C4707330","DECIPHER:85"],"synonyms":[{"name":"dup(8)(p23.1p23.1)","type":"exact"},{"name":"trisomy 8p23.1","type":"exact"}],"termid":"MONDO:0016659","xrefs":{"Monarch":{"xref_id":"0016659"}}}


id: PBO:0043533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 1","termid":"PBO:0043533"}


id: MONDO:0018889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of beta-myosin heavy chain (MYH7)","termid":"MONDO:0016195"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"hyaline body myopathy","secondary_identifiers":["DOID:0111267","GARD:7148","icd11.foundation:352828432","Orphanet:53698"],"synonyms":[{"name":"myosin storage myopathy","type":"exact"}],"termid":"MONDO:0018889","xrefs":{"Monarch":{"xref_id":"0018889"}}}


id: PATO:0000648
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's being blocked or filled with obstacles or an obstacle.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closed","termid":"PATO:0000608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obstructed","termid":"PATO:0000648"}


id: PBO:0003318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi matrix protein (predicted)","termid":"PBO:0003318"}


id: PBO:0043802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 2","termid":"PBO:0043802"}


id: GO:0006701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants.","definition_xrefs":["PMID:14613534","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C21-steroid hormone biosynthetic process","termid":"GO:0006700"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"progesterone metabolic process","termid":"GO:0042448"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"progesterone biosynthetic process","synonyms":[{"name":"progesterone anabolism","type":"exact"},{"name":"progesterone biosynthesis","type":"exact"},{"name":"progesterone formation","type":"exact"},{"name":"progesterone synthesis","type":"exact"}],"termid":"GO:0006701"}


id: GO:0051308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which paired chromosomes are physically detached from each other during male meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male meiosis chromosome segregation","termid":"GO:0007060"},{"relation_name":"is_a","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"male meiosis chromosome separation","synonyms":[{"name":"chromosome separation during male meiosis","type":"exact"},{"name":"male meiosis chromosome resolution","type":"exact"}],"termid":"GO:0051308"}


id: PBO:0059014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 1","termid":"PBO:0059014"}


id: MONDO:0008417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sclerocornea","termid":"MONDO:0019629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"sclerocornea, autosomal dominant","secondary_identifiers":["UMLS:C1866984","MEDGEN:356662","MESH:C566692","OMIM:181700"],"synonyms":[{"name":"sclerocornea, autosomal dominant","type":"exact"}],"termid":"MONDO:0008417","xrefs":{"Monarch":{"xref_id":"0008417"}}}


id: MONDO:0014375
data:
  {"annotated_genes":["SJAG_04059","SJAG_04049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88250,88251],"is_not":false,"summary":null,"term":"MONDO:0014375"}]},"cv_name":"mondo","definition":"Congenital chronic diarrhea with protein-losing enteropathy is a rare, genetic, intestinal disease characterized by early-onset, chronic, non-infectious, non-bloody, watery diarrhea associated with protein-losing enteropathy which results in hypoalbuminemia, hypogammaglobulinemia and elevated stool alpha-1-antitrypsin. Patients typically present severe, intractable diarrhea, failure to thrive, recurrent infections and edema.","definition_xrefs":["Orphanet:329242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital diarrhea 7 with exudative enteropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:862953","DOID:0060778","UMLS:C4014516","OMIM:615863","GARD:17500"],"synonyms":[{"name":"DGAT1 congenital diarrhea","type":"exact"},{"name":"DGAT1 congenital diarrhoea","type":"exact"},{"name":"DIAR7","type":"related"},{"name":"congenital chronic diarrhea with exudative enteropathy","type":"exact"},{"name":"congenital chronic diarrhea with protein-losing enteropathy","type":"exact"},{"name":"congenital chronic diarrhoea with exudative enteropathy","type":"exact"},{"name":"congenital chronic diarrhoea with protein-losing enteropathy","type":"exact"},{"name":"congenital diarrhea caused by mutation in DGAT1","type":"exact"},{"name":"congenital diarrhoea caused by mutation in DGAT1","type":"exact"},{"name":"diarrhea 7","type":"related"},{"name":"diarrhea 7, protein-losing enteropathy type","type":"exact"},{"name":"diarrhea type 7","type":"exact"},{"name":"diarrhoea 7","type":"related"},{"name":"diarrhoea 7, protein-losing enteropathy type","type":"exact"},{"name":"diarrhoea type 7","type":"exact"}],"termid":"MONDO:0014375","terms_by_termid":{"MONDO:0014375":null},"xrefs":{"Monarch":{"xref_id":"0014375"}}}


id: PBO:0063431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 5","termid":"PBO:0063431"}


id: PBO:0071354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 13","termid":"PBO:0071354"}


id: GO:0051545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of elastin.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of elastin biosynthetic process (obsolete GO:0051545)","synonyms":[{"name":"down regulation of elastin biosynthetic process","type":"exact"},{"name":"down-regulation of elastin biosynthetic process","type":"exact"},{"name":"downregulation of elastin biosynthetic process","type":"exact"},{"name":"inhibition of elastin biosynthetic process","type":"narrow"}],"termid":"GO:0051545"}


id: GO:0100044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular hyperosmotic salinity response.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular hyperosmotic salinity response by transcription from RNA polymerase II promoter (obsolete GO:0100044)","termid":"GO:0100044"}


id: FYPO:0000216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of mitotic DNA replication is abnormal. May result in re-replication of all or part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"},{"relation_name":"is_a","term_name":"abnormal negative regulation of DNA replication initiation","termid":"FYPO:0004757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation during vegetative growth","type":"exact"},{"name":"mitotic DNA re-replication","type":"related"},{"name":"mitotic DNA rereplication","type":"related"}],"termid":"FYPO:0000216"}


id: PBO:0063576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARGC1 and ESRR induced regulator, muscle 1","termid":"PBO:0063576"}


id: PBO:0063829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphohistidine phosphatase 1","termid":"PBO:0063829"}


id: FYPO:0003204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain a detectable secondary cell septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"secondary cell septum absent from cell during vegetative growth","synonyms":[{"name":"absent secondary cell septum during vegetative growth","type":"exact"},{"name":"secondary cell septum absent from cell during mitotic cell cycle","type":"related"},{"name":"secondary septum absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003204"}


id: PBO:0085457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potential adenine phosphoribosyltransferase; encodes a protein with similarity to adenine phosphoribosyltransferase, but artificially expressed protein exhibits no enzymatic activity; APT2 has a paralog, APT1, that arose from the whole genome duplication","termid":"PBO:0085457"}


id: GO:0019541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate, the anion derived from propionic (propanoic) acid, a carboxylic acid important in the energy metabolism of ruminants.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"propionate metabolic process","synonyms":[{"name":"propanoate metabolic process","type":"exact"},{"name":"propanoate metabolism","type":"exact"},{"name":"propionate metabolism","type":"exact"}],"termid":"GO:0019541"}


id: PBO:0045842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 32","termid":"PBO:0045842"}


id: GO:0150138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-37 production.","definition_xrefs":["GOC:aruk","PMID:30362558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-37 production","termid":"GO:0150136"},{"relation_name":"negatively_regulates","term_name":"interleukin-37 production","termid":"GO:0150137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-37 production","synonyms":[{"name":"negative regulation of interleukin-37 biosynthetic process","type":"narrow"}],"termid":"GO:0150138"}


id: GO:0019443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of tryptophan, catalyzed by the enzyme tryptophanase (EC:4.1.99.1).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptophan catabolic process, using tryptophanase (obsolete GO:0019443)","synonyms":[{"name":"tryptophan breakdown, using tryptophanase","type":"exact"},{"name":"tryptophan catabolic process, using tryptophanase","type":"exact"},{"name":"tryptophan degradation, using tryptophanase","type":"exact"}],"termid":"GO:0019443"}


id: MONDO:0016122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodic paralysis","secondary_identifiers":["GARD:20374","MESH:D010245","UMLS:C1279412","MEDGEN:488958","icd11.foundation:577112387","HP:0003768","Orphanet:206976","MedDRA:10016208"],"synonyms":[{"name":"periodic paralysis","type":"exact"},{"name":"periodic paralysis (disease)","type":"exact"}],"termid":"MONDO:0016122","xrefs":{"Monarch":{"xref_id":"0016122"}}}


id: SO:0002246
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A partially_duplicated_transcript where the 3' end of the transcript is duplicated.","direct_ancestors":[{"relation_name":"is_a","term_name":"partially_duplicated_transcript","termid":"SO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_duplicated_transcript","synonyms":[{"name":"3' duplicated transcript","type":"exact"},{"name":"three prime duplicated transcript","type":"exact"},{"name":"three prime partially duplicated transcript","type":"exact"}],"termid":"SO:0002246"}


id: MONDO:0018524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intraductal papillary mucinous carcinoma of pancreas (obsolete MONDO:0018524)","termid":"MONDO:0018524","xrefs":{"Monarch":{"xref_id":"0018524"}}}


id: GO:0004637
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72499],"is_not":false,"summary":null,"term":"GO:0004637"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-D-ribosylamine + ATP + glycine = N(1)-(5-phospho-D-ribosyl)glycinamide + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:17453","EC:6.3.4.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R04144","MetaCyc:GLYRIBONUCSYN-RXN","Reactome:R-HSA-73814"],"synonyms":[{"name":"2-amino-N-ribosylacetamide 5'-phosphate kinosynthase activity","type":"related"},{"name":"5'-phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"5-phospho-D-ribosylamine:glycine ligase (ADP-forming)","type":"related"},{"name":"GAR","type":"related"},{"name":"GAR synthetase activity","type":"related"},{"name":"GARS activity","type":"related"},{"name":"glycinamide ribonucleotide synthetase activity","type":"related"},{"name":"glycineamide ribonucleotide synthetase activity","type":"related"},{"name":"phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"phosphoribosylglycineamide synthetase activity","type":"related"}],"termid":"GO:0004637","terms_by_termid":{"GO:0004637":null}}


id: MONDO:0008865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bietti's crystalline dystrophy (BCD) is a rare progressive autosomal recessive tapetoretinal degeneration disease, occurring in the third decade of life, characterized by small sparkling crystalline deposits in the posterior retina and corneal limbus in addition to sclerosis of the choroidal vessels and manifesting as nightblindness, decreased vision, paracentral scotoma, and, in the end stages of the disease, legal blindness.","definition_xrefs":["Orphanet:41751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial flecked retinopathy","termid":"MONDO:0016420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Bietti crystalline corneoretinal dystrophy","secondary_identifiers":["DOID:0050664","GARD:10050","MESH:C535440","MEDGEN:347895","NCIT:C179299","SCTID:312927001","UMLS:C1859486","OMIM:210370"],"synonyms":[{"name":"BCD","type":"exact"},{"name":"Bietti crystalline corneoretinal dystrophy","type":"exact"},{"name":"Bietti crystalline dystrophy","type":"related"},{"name":"Bietti crystalline retinopathy","type":"exact"},{"name":"Bietti tapetoretinal Degeneration with marginal corneal dystrophy","type":"related"},{"name":"Bietti's crystalline dystrophy","type":"exact"}],"termid":"MONDO:0008865","xrefs":{"Monarch":{"xref_id":"0008865"}}}


id: MONDO:0850075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic unifrontosphenoidal craniosynostosis","secondary_identifiers":["MEDGEN:1843063","Orphanet:620139","UMLS:C5680399","GARD:22472"],"termid":"MONDO:0850075","xrefs":{"Monarch":{"xref_id":"0850075"}}}


id: PBO:0063001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestagen associated endometrial protein pseudogene 1","termid":"PBO:0063001"}


id: PBO:0064474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLE4 pseudogene 1","termid":"PBO:0064474"}


id: PBO:0086870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative spore wall protein; expression increases during sporulation; not an essential gene; YOR214C has a paralog, SPO19, that arose from the whole genome duplication","termid":"PBO:0086870"}


id: GO:0006066
data:
  {"annotated_genes":["SJAG_02963","SJAG_01702","SJAG_00237","SJAG_04049","SJAG_00624","SJAG_02982","SJAG_03370","SJAG_03362","SJAG_03509","SJAG_00370","SJAG_03743","SJAG_00554","SJAG_03235","SJAG_02321","SJAG_04320","SJAG_02406","SJAG_03018","SJAG_02420","SJAG_03715","SJAG_00453","SJAG_01414","SJAG_04282","SJAG_03024","SJAG_02429","SJAG_00880","SJAG_03609","SJAG_03531","SJAG_00240","SJAG_04866","SJAG_00770","SJAG_00717","SJAG_02104","SJAG_05219","SJAG_03739","SJAG_02305","SJAG_00827","SJAG_02421","SJAG_04059","SJAG_04067","SJAG_04870","SJAG_03598","SJAG_02706","SJAG_00381","SJAG_03929","SJAG_00409","SJAG_01474","SJAG_04954","SJAG_03409","SJAG_04842","SJAG_01970","SJAG_04810","SJAG_04362","SJAG_05006","SJAG_04192","SJAG_01307","SJAG_00413","SJAG_03275","SJAG_02044","SJAG_02068","SJAG_01012","SJAG_03249","SJAG_01742","SJAG_03098","SJAG_04048","SJAG_00321","SJAG_01154","SJAG_02734","SJAG_02855","SJAG_01148","SJAG_02047","SJAG_04018","SJAG_04178","SJAG_03750","SJAG_03538","SJAG_01057","SJAG_02903","SJAG_00158","SJAG_02163","SJAG_04499","SJAG_04270","SJAG_04790","SJAG_03822","SJAG_00244","SJAG_04217","SJAG_02719"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58974,79288],"is_not":false,"summary":null,"term":"GO:0006066"},{"annotations":[90421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[75635,73237,72914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[81055,107115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071543"},{"annotations":[76193,101893,73813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[64400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019348"},{"annotations":[82101,82127,74912,109778,73280,72661,109463,112037,117213,76063,118529,81915,67090,73494,96489,78262,78999,91483,75718,111194,77905,90289,71587,78270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[105255,82093,117055,78077,105900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008204"},{"annotations":[70816,63810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[80429,73783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[66849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006071"},{"annotations":[116594,90321,100606,116595,100605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[90422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[67151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006021"},{"annotations":[58608,95222,76540,72965,77278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[90529,117027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[108837,69296,108838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043647"},{"annotations":[75611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006102"},{"annotations":[95726],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[62327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[111803],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[98448],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[115655,90859],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[77258],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[90379,107761],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"},{"annotations":[74373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"},{"annotations":[78624,75454,80704,98774,107915,111667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[110463,71620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"},{"annotations":[71801,80238,62132,75746,75688,78782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[67335,59202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[112401,112402,101406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic 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id: SO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a long non-coding RNA.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA_gene","synonyms":[{"name":"lnc RNA gene","type":"exact"},{"name":"lnc_RNA_gene","type":"exact"},{"name":"long_non_coding_RNA_gene","type":"exact"}],"termid":"SO:0002127"}


id: GO:0160047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + muramyl dipeptide = ADP + H+ + 6-O-phospho-muramyl dipeptide.","definition_xrefs":["PMID:36002575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"muramyl dipeptide kinase activity","secondary_identifiers":["RHEA:75935"],"termid":"GO:0160047"}


id: PBO:0065402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 5","termid":"PBO:0065402"}


id: PBO:0047104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 153 member C, pseudogene","termid":"PBO:0047104"}


id: GO:0098885
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modifies the structure of a postsynaptic actin cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification of postsynaptic structure","termid":"GO:0099010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modification of postsynaptic actin cytoskeleton","synonyms":[{"name":"postsynaptic actin cytoskeleton remodelling","type":"exact"}],"termid":"GO:0098885"}


id: PBO:0038355
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_ligand","termid":"PBO:0038355"}


id: FYPO:0004155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during mitotic G1 phase (obsolete FYPO:0004155)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during mitotic G1 phase","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during G1 phase during vegetative growth","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during G1 phase of mitotic cell cycle","type":"exact"},{"name":"increased tyrosine phosphorylation during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004155"}


id: MONDO:0045071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell non-Hodgkin lymphoma","termid":"MONDO:0000607"},{"relation_name":"is_a","term_name":"mycosis fungoides and variants","termid":"MONDO:0015821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"mycosis fungoides variant","secondary_identifiers":["UMLS:C1513782","MEDGEN:271222","NCIT:C39644"],"synonyms":[{"name":"mycosis fungoides variant","type":"exact"}],"termid":"MONDO:0045071","xrefs":{"Monarch":{"xref_id":"0045071"}}}


id: PBO:0046788
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of zeste 2 polycomb repressive complex 2 subunit pseudogene 1","termid":"PBO:0046788"}


id: MONDO:0014351
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  {"annotated_genes":["SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88215],"is_not":false,"summary":null,"term":"MONDO:0014351"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the AMPD2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04123":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060278","GARD:17590","OMIM:615809","Orphanet:369920","MEDGEN:862791","UMLS:C4014354"],"synonyms":[{"name":"AMPD2 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"PCH9","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in AMPD2","type":"exact"},{"name":"pontocerebellar hypoplasia, type 9","type":"related"}],"termid":"MONDO:0014351","terms_by_termid":{"MONDO:0014351":null},"xrefs":{"Monarch":{"xref_id":"0014351"}}}


id: GO:1904365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokinesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:8679543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"chemokinesis","termid":"GO:0042466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chemokinesis","termid":"GO:1904365"}


id: PBO:0087585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the catalytic core of the APC/C; has similarity to cullin Cdc53p","termid":"PBO:0087585"}


id: FYPO:0007839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is abnormal.","definition_xrefs":["PMID:34019809","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"abnormal NAT activity","type":"related"},{"name":"abnormal protein N-terminal acetyltransferase activity","type":"exact"}],"termid":"FYPO:0007839"}


id: GO:2000597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of optic nerve formation","termid":"GO:2000595"},{"relation_name":"positively_regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of optic nerve formation","synonyms":[{"name":"positive regulation of CN II biosynthesis","type":"related"},{"name":"positive regulation of CN II formation","type":"related"}],"termid":"GO:2000597"}


id: PBO:0041652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 2","termid":"PBO:0041652"}


id: GO:0043610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of carbohydrate utilization.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"carbohydrate utilization","termid":"GO:0009758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of carbohydrate utilization","synonyms":[{"name":"regulation of sugar utilization","type":"narrow"}],"termid":"GO:0043610"}


id: FYPO:0008256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a lower extent than normal at long terminal repeat (LTR) regions.","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K4 acetylation during vegetative growth","termid":"FYPO:0004239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K4 acetylation at LTR during vegetative growth","termid":"FYPO:0008256"}


id: GO:1900596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-kotanin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"(+)-kotanin metabolic process","termid":"GO:1900594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-kotanin biosynthetic process","synonyms":[{"name":"(+)-kotanin anabolism","type":"exact"},{"name":"(+)-kotanin biosynthesis","type":"exact"},{"name":"(+)-kotanin formation","type":"exact"},{"name":"(+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900596"}


id: MONDO:0013854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the CCDC103 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 17","secondary_identifiers":["DOID:0110621","OMIM:614679","MEDGEN:762261","UMLS:C3542550","GARD:15835"],"synonyms":[{"name":"CCDC103 primary ciliary dyskinesia","type":"exact"},{"name":"CILD17","type":"exact"},{"name":"ciliary dyskinesia, primary, 17","type":"related"},{"name":"ciliary dyskinesia, primary, 17, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 17","type":"exact"},{"name":"primary ciliary dyskinesia 17","type":"exact"},{"name":"primary ciliary dyskinesia 17 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in CCDC103","type":"exact"},{"name":"primary ciliary dyskinesia type 17","type":"exact"}],"termid":"MONDO:0013854","xrefs":{"Monarch":{"xref_id":"0013854"}}}


id: MONDO:0000376
data:
  {"annotated_genes":["SJAG_03453","SJAG_00229","SJAG_04114","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88619,88618,89150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[88164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the respiratory system","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_04114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"respiratory system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:165.9","UMLS:C3164456","MEDGEN:756863","SCTID:449096009","DOID:0050615","ICD9:165.8","NCIT:C4571"],"synonyms":[{"name":"cancer of respiratory system","type":"exact"},{"name":"malignant neoplasm of respiratory system","type":"exact"},{"name":"malignant respiratory system neoplasm","type":"exact"},{"name":"respiratory system cancer","type":"exact"}],"termid":"MONDO:0000376","terms_by_termid":{"MONDO:0008903":null,"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0000376"}}}


id: MONDO:1012208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"perosomus elumbis, non-human animal","termid":"MONDO:1011668"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perosomus elumbis, horse","secondary_identifiers":["OMIA:000789-9796"],"termid":"MONDO:1012208","xrefs":{"Monarch":{"xref_id":"1012208"}}}


id: MONDO:0008401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm characterized by the presence of benign epithelial and myoepithelial cells and a mesenchymal component that may contain mucoid, myxoid, cartilaginous, or osseous areas. It may be completely or partially encapsulated. It occurs in the parotid gland, submandibular gland, minor salivary glands in the oral cavity, upper respiratory tract, and nasal cavity and paranasal sinuses. It usually presents as a slow growing painless mass. Infrequently, patients may present with pain and facial palsy. It may recur after excision or transform to a malignant neoplasm (carcinoma ex pleomorphic adenoma).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"benign epithelial tumor of salivary glands","termid":"MONDO:0017168"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pleomorphic adenoma","secondary_identifiers":["ICDO:8940/0","GARD:17789","MESH:D008949","NCIT:C8602","DOID:452","OMIM:181030","UMLS:C1519176","Orphanet:454821","MEDGEN:275400","ICD10CM:D11.0","SCTID:447888006"],"synonyms":[{"name":"Psa","type":"related"},{"name":"Sgpa","type":"related"},{"name":"adenomas, salivary gland pleomorphic, somatic","type":"exact"},{"name":"mixed tumor of the salivary gland","type":"related"},{"name":"mixed tumour of the salivary gland","type":"related"},{"name":"pleomorphic adenoma","type":"exact"},{"name":"pleomorphic adenoma (morphologic abnormality)","type":"exact"},{"name":"pleomorphic salivary gland adenoma","type":"related"},{"name":"salivary gland adenoma, pleomorphic","type":"related"},{"name":"tumor, mixed, benign","type":"exact"}],"termid":"MONDO:0008401","xrefs":{"Monarch":{"xref_id":"0008401"}}}


id: MONDO:0007336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cleft palate that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated cleft palate","secondary_identifiers":["ICD10CM:Q35.3","ICD10CM:Q35.1","MEDGEN:332392","DOID:0110213","OMIM:119540","UMLS:C1837218","GARD:1896"],"synonyms":[{"name":"CPI","type":"related"},{"name":"cleft palate","type":"related"},{"name":"cleft palate, isolated","type":"related"},{"name":"dominant cleft palate","type":"related"},{"name":"isolated cleft palate","type":"exact"},{"name":"nonsyndromic cleft palate","type":"exact"}],"termid":"MONDO:0007336","xrefs":{"Monarch":{"xref_id":"0007336"}}}


id: PBO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit 2-like Tca17 (predicted)","termid":"PBO:0033818"}


id: GO:0050650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chondroitin sulfate proteoglycans, which consist of a core protein linked to a chondroitin sulfate glycosaminoglycan. The chondroitin sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-D-glucuronic acid-beta-(1,3)-N-acetyl-D-galactosamine, the latter of which can be O-sulfated. Chondroitin sulfate chains are covalently linked to serine/threonine residues (O-linked) of the core protein via a tetrasaccharide linker sequence (xylose-galactose-galactose-glucuronate).","definition_xrefs":["PMID:17239763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan biosynthetic process","termid":"GO:0030166"},{"relation_name":"is_a","term_name":"chondroitin sulfate proteoglycan metabolic process","termid":"GO:0050654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-6567"],"synonyms":[{"name":"chondroitin sulfate proteoglycan anabolism","type":"exact"},{"name":"chondroitin sulfate proteoglycan biosynthesis","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation","type":"exact"},{"name":"chondroitin sulfate proteoglycan synthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthetic process","type":"exact"}],"termid":"GO:0050650"}


id: PBO:0046316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enkurin domain containing 1","termid":"PBO:0046316"}


id: RO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite-of relationship in which the host is a plant and the parasite that attaches to the host root (PO:0009005)","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"root_parasite_of","termid":"RO:0002236"}


id: GO:0045830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin production","termid":"GO:0002639"},{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin mediated immune response","termid":"GO:0002891"},{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"positive regulation of B cell activation","termid":"GO:0050871"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"positive regulation of isotype switching","synonyms":[{"name":"activation of isotype switching","type":"narrow"},{"name":"positive regulation of class switch recombination","type":"exact"},{"name":"positive regulation of class switching","type":"exact"},{"name":"positive regulation of isotype switch recombination","type":"exact"},{"name":"stimulation of isotype switching","type":"narrow"},{"name":"up regulation of isotype switching","type":"exact"},{"name":"up-regulation of isotype switching","type":"exact"},{"name":"upregulation of isotype switching","type":"exact"}],"termid":"GO:0045830"}


id: PBO:0091340
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulated by Different Signals","termid":"PBO:0091340"}


id: PBO:0050246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 24","termid":"PBO:0050246"}


id: GO:0009912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cellular identity of auditory hair cells is acquired and determined.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell fate commitment","termid":"GO:0060120"},{"relation_name":"part_of","term_name":"inner ear auditory receptor cell differentiation","termid":"GO:0042491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell fate commitment","synonyms":[{"name":"auditory hair cell fate commitment","type":"exact"}],"termid":"GO:0009912"}


id: GO:0102137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O2 + reduced [NADPH--hemoprotein reductase] + teasterone = 7-oxateasterone + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 7-oxateasterone synthase activity (obsolete GO:0102137)","termid":"GO:0102137"}


id: GO:0106379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-(d)RTP + H20 = 8-oxo-(d)RMP + diphosphate + H+.","definition_xrefs":["PMID:11139615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0047429","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"8-oxo-(d)RTP hydrolase activity","secondary_identifiers":["Reactome:R-HSA-9731228"],"termid":"GO:0106379"}


id: PR:O94318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.14c","secondary_identifiers":["UniProtKB:O94318"],"synonyms":[{"name":"Spom972h-CHMP6","type":"exact"}],"termid":"PR:O94318"}


id: GO:0047805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP = 3',5'-cyclic CMP + diphosphate + H+.","definition_xrefs":["RHEA:14737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0009975","GO:0003824"],"is_obsolete":false,"name":"cytidylate cyclase activity","secondary_identifiers":["KEGG_REACTION:R00574","EC:4.6.1.6","MetaCyc:CYTIDYLATE-CYCLASE-RXN"],"synonyms":[{"name":"3',5'-cyclic-CMP synthase activity","type":"related"},{"name":"3'5'-cyclic-CMP synthase activity","type":"related"},{"name":"CTP diphosphate-lyase (cyclizing)","type":"related"},{"name":"CTP diphosphate-lyase (cyclizing; 3',5'-cyclic-CMP-forming)","type":"related"},{"name":"cytidyl cyclase activity","type":"related"},{"name":"cytidylyl cyclase activity","type":"related"}],"termid":"GO:0047805"}


id: PBO:0034106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_during","termid":"PBO:0034106"}


id: PBO:0040590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BACH1 antisense RNA 1","termid":"PBO:0040590"}


id: PBO:0041349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 85","termid":"PBO:0041349"}


id: FYPO:0003560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spindle pole body organization is abnormal. Spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the spindle pole body (SPB).","definition_xrefs":["GO:0051300","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal spindle pole body organization","synonyms":[{"name":"abnormal SPB organization","type":"exact"},{"name":"abnormal spindle pole body organisation","type":"exact"}],"termid":"FYPO:0003560"}


id: PBO:0081496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 394","termid":"PBO:0081496"}


id: PBO:0071505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 8","termid":"PBO:0071505"}


id: PBO:0054000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1324","termid":"PBO:0054000"}


id: GO:0106350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 5 isopentenyl diphosphate = 5 diphosphate + all-trans-octaprenyl diphosphate.","definition_xrefs":["RHEA:27798","PMID:3519603","PMID:8037730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"all-trans-octaprenyl-diphosphate synthase activity","secondary_identifiers":["EC:2.5.1.90"],"synonyms":[{"name":"octaprenyl pyrophosphate synthase activity","type":"exact"},{"name":"terpenyl pyrophosphate synthetase activity","type":"broad"},{"name":"trans-heptaprenyltranstransferase activity","type":"exact"},{"name":"trans-prenyltransferase activity","type":"broad"}],"termid":"GO:0106350"}


id: GO:0071993
data:
  {"annotated_genes":["SJAG_05213","SJAG_03497","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98925,97936,120205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"}]},"cv_name":"biological_process","definition":"The directed movement of a phytochelatin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phytochelatins are a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phytochelatin transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin transport","type":"related"}],"termid":"GO:0071993","terms_by_termid":{"GO:0036246":null}}


id: PBO:0028695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcription_termination","termid":"PBO:0028695"}


id: GO:0099083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Modulation of synaptic transmission by cell-cell signaling across the synaptic cleft from postsynapse to presynapse, mediated by a neuropeptide.","definition_xrefs":["GOC:dos","GOC:bf","GOC:PARL","PMID:19448629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by neuropeptide, modulating synaptic transmission","termid":"GO:0099551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by neuropeptide, modulating synaptic transmission","termid":"GO:0099083"}


id: GO:1990505
data:
  {"annotated_genes":["SJAG_01374","SJAG_03780","SJAG_00573","SJAG_02822","SJAG_03300","SJAG_02214","SJAG_03843","SJAG_06022","SJAG_01410","SJAG_01677","SJAG_01584","SJAG_02198","SJAG_02079","SJAG_03898","SJAG_02992","SJAG_04272","SJAG_01221","SJAG_01832","SJAG_02439","SJAG_01076"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111071,113720],"is_not":false,"summary":null,"term":"GO:1990505"},{"annotations":[111506,65066,92779,109687,114487,118790,100826,96687,96931,90990,97875,111027,109663,98042,100118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990426"},{"annotations":[90820,118401,108058],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120292"}]},"cv_name":"biological_process","definition":"Any maintenance of fidelity that is involved in mitotic cell cycle DNA replication.","definition_xrefs":["PMID:19185548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication maintenance of fidelity","termid":"GO:1902298"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_01076":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01584":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02214":null,"SJAG_02439":null,"SJAG_02822":null,"SJAG_02992":null,"SJAG_03300":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04272":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"mitotic DNA replication maintenance of fidelity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1990510"],"synonyms":[{"name":"maintenance of fidelity involved in mitotic DNA replication","type":"exact"},{"name":"maintenance of fidelity involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1990505","terms_by_termid":{"GO:0120292":null,"GO:1990426":null,"GO:1990505":null}}


id: GO:0071183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains two cell adhesion molecules, a protocadherin-alpha and a protocadherin-gamma, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}


id: GO:0170010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly conserved protein complex that recognises and elicits the rapid degradation of mRNAs in which an amino-acid codon has changed to a nonsense codon; occurs when the 3' end is not protected by a 3'-poly(A) tail; degradation proceeds in the 3' to 5' direction.","definition_xrefs":["PMID:29282598","PMID:9032286","GOC:lnp","PMID:1569946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nonsense-mediated decay complex","secondary_identifiers":["IntAct:EBI-16420380"],"synonyms":[{"name":"Upf complex","type":"exact"}],"termid":"GO:0170010"}


id: GO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-glutamate import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"positively_regulates","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-glutamate import across plasma membrane","secondary_identifiers":["GO:1900922"],"synonyms":[{"name":"activation of L-glutamate import","type":"narrow"},{"name":"activation of L-glutamate transport","type":"narrow"},{"name":"activation of L-glutamate uptake","type":"narrow"},{"name":"positive regulation of L-glutamate import","type":"broad"},{"name":"positive regulation of L-glutamate transport","type":"broad"},{"name":"positive regulation of L-glutamate uptake","type":"related"},{"name":"stimulation of L-glutamate transport","type":"narrow"},{"name":"up regulation of L-glutamate import","type":"exact"},{"name":"up regulation of L-glutamate transport","type":"broad"},{"name":"up regulation of L-glutamate uptake","type":"related"},{"name":"up-regulation of L-glutamate import","type":"exact"},{"name":"up-regulation of L-glutamate transport","type":"exact"},{"name":"up-regulation of L-glutamate uptake","type":"related"},{"name":"upregulation of L-glutamate import","type":"exact"},{"name":"upregulation of L-glutamate transport","type":"broad"},{"name":"upregulation of L-glutamate uptake","type":"related"}],"termid":"GO:0002038"}


id: PBO:0005297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,4-glucan synthase Mok14","termid":"PBO:0005297"}


id: FYPO:0000156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromatin silencing at silent mating-type cassette","synonyms":[{"name":"abnormal chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"abnormal chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0000156"}


id: GO:0046701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of insecticides, chemicals used to kill insects.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin catabolic process","termid":"GO:0009407"},{"relation_name":"is_a","term_name":"insecticide metabolic process","termid":"GO:0017143"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754","GO:0019748"],"is_obsolete":false,"name":"insecticide catabolic process","synonyms":[{"name":"insecticide breakdown","type":"exact"},{"name":"insecticide catabolism","type":"exact"},{"name":"insecticide degradation","type":"exact"}],"termid":"GO:0046701"}


id: PBO:0075330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SON DNA and RNA binding protein","termid":"PBO:0075330"}


id: PBO:0048035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III and SPRY domain containing 2","termid":"PBO:0048035"}


id: MONDO:0016126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"viral myositis","secondary_identifiers":["Orphanet:206991","SCTID:240105009","icd11.foundation:864399177","ICD9:729.1","UMLS:C0150005","GARD:20377","MedDRA:10051512","MEDGEN:508472"],"termid":"MONDO:0016126","xrefs":{"Monarch":{"xref_id":"0016126"}}}


id: FYPO:0000169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at subtelomeric regions is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromatin silencing at subtelomere","synonyms":[{"name":"abnormal chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at telomere","type":"related"},{"name":"abnormal chromatin silencing at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0000169"}


id: MONDO:1010971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysautonomia that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysautonomia, non-human animal","termid":"MONDO:1010229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia, llama","secondary_identifiers":["OMIA:000312-9844"],"termid":"MONDO:1010971","xrefs":{"Monarch":{"xref_id":"1010971"}}}


id: MONDO:0000448
data:
  {"annotated_genes":["SJAG_01895","SJAG_01671","SJAG_03920","SJAG_03163","SJAG_02398","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[88834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[88744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[87448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[88980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm arising from paraganglia located along the sympathetic or parasympathetic nerves. Infrequently, it may arise outside the usual distribution of the sympathetic and parasympathetic paraganglia. Tumors arising from the adrenal gland medulla are called pheochromocytomas. Morphologically, paragangliomas usually display a nesting (Zellballen) growth pattern. There are no reliable morphologic criteria to distinguish between benign and malignant paragangliomas. The only definitive indicator of malignancy is the presence of regional or distant metastases.","definition_xrefs":["NCIT:C3308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system neoplasm","termid":"MONDO:0002366"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03163":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"paraganglioma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.7","ICDO:8680/1","MEDGEN:10571","UMLS:C0030421","OMIMPS:168000","ONCOTREE:PGNG","SCTID:127027008","EFO:1000453","DOID:0050773","MESH:D010235"],"synonyms":[{"name":"Paraganglionic neoplasm","type":"exact"},{"name":"Paraganglionic tumor","type":"exact"},{"name":"Paraganglionic tumour","type":"exact"},{"name":"chemodectoma","type":"narrow"},{"name":"neoplasm of paraganglion","type":"exact"},{"name":"neoplasm of the paraganglion","type":"exact"},{"name":"paraganglioma","type":"exact"},{"name":"paragangliomas","type":"exact"},{"name":"paraganglion neoplasm","type":"exact"},{"name":"paraganglion tumor","type":"exact"},{"name":"paraganglion tumour","type":"exact"},{"name":"tumor of paraganglion","type":"exact"},{"name":"tumor of the paraganglion","type":"exact"},{"name":"tumour of paraganglion","type":"exact"},{"name":"tumour of the paraganglion","type":"exact"}],"termid":"MONDO:0000448","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null,"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0000448"}}}


id: MONDO:0700076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple acyl-CoA dehydrogenase deficiency in which the cause of the disease is a mutation in the ETFDH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple acyl-CoA dehydrogenase deficiency","termid":"MONDO:0009282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005267","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"glutaric acidemia IIc","secondary_identifiers":["UMLS:C3278156","MEDGEN:479786"],"synonyms":[{"name":"ETFDH deficiency","type":"exact"},{"name":"GA2C","type":"exact"},{"name":"glutaric acidemia 2C","type":"exact"},{"name":"multiple acyl-CoA dehydrogenase deficiency caused by mutation in ETFDH","type":"exact"}],"termid":"MONDO:0700076","xrefs":{"Monarch":{"xref_id":"0700076"}}}


id: PBO:0058155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4450","termid":"PBO:0058155"}


id: PBO:0066444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REV1 DNA directed polymerase","termid":"PBO:0066444"}


id: PBO:0062987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PACRG antisense RNA 2","termid":"PBO:0062987"}


id: GO:0034673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of inhibin, type III transforming growth factor beta receptor (also known as betaglycan), and the type II activin receptor ActRII. The complex is thought to negatively regulate the activity of activin B.","definition_xrefs":["PMID:10746731","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"inhibin-betaglycan-ActRII complex","termid":"GO:0034673"}


id: GO:0000783
data:
  {"annotated_genes":["SJAG_03685","SJAG_01777","SJAG_01378","SJAG_02362","SJAG_02194","SJAG_01864","SJAG_04245","SJAG_03092"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64218,112322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990879"},{"annotations":[91586,117922,93675,96948,81648,101600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070187"}]},"cv_name":"cellular_component","definition":"A complex of DNA and protein located at the end of a linear chromosome in the nucleus that protects and stabilizes a linear chromosome.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere cap complex","termid":"GO:0000782"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01378":null,"SJAG_01777":null,"SJAG_01864":null,"SJAG_02194":null,"SJAG_02362":null,"SJAG_03092":null,"SJAG_03685":null,"SJAG_04245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear telomere cap complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000783","terms_by_termid":{"GO:0070187":null,"GO:1990879":null}}


id: PBO:0028070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_aseptate_mononucleate_cell","termid":"PBO:0028070"}


id: PBO:0087822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (65 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087822"}


id: MONDO:0700163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langerhans cell histiocytosis occurring in a dog.","definition_xrefs":["NCIT:C158785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"histiocytosis, non-human animal","termid":"MONDO:1011436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine Langerhans cell histiocytosis","termid":"MONDO:0700163","xrefs":{"Monarch":{"xref_id":"0700163"}}}


id: PBO:0051919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 3","termid":"PBO:0051919"}


id: MONDO:0002547
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89123,89124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm arising from the perineural cells in the sheaths surrounding the nerves. Representative examples include neurofibroma, schwannoma, and malignant peripheral nerve sheath tumor.","definition_xrefs":["NCIT:C4972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"},{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"nerve sheath neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:64639","ONCOTREE:NST","UMLS:C0206727","DOID:3193","MESH:D018317"],"synonyms":[{"name":"neoplasm of nerve sheath","type":"exact"},{"name":"neoplasm of the nerve sheath","type":"exact"},{"name":"nerve sheath neoplasm","type":"exact"},{"name":"nerve sheath tumor","type":"exact"},{"name":"nerve sheath tumour","type":"exact"},{"name":"peripheral nerve sheath neoplasm","type":"exact"},{"name":"tumor of nerve sheath","type":"exact"},{"name":"tumour of nerve sheath","type":"exact"}],"termid":"MONDO:0002547","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0002547"}}}


id: GO:0097456
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of myelin-forming Schwann cell consisting of terminal cytoplasmic extensions adhered to the axon at the beginning and end of the myelin sheath.","definition_xrefs":["NIF_Subcellular:sao924713546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"terminal loop","synonyms":[{"name":"terminal loop of Schwann cell","type":"exact"}],"termid":"GO:0097456"}


id: PBO:0072325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 11","termid":"PBO:0072325"}


id: GO:0005933
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protuberance from a cell of an organism that reproduces by budding, which will grow larger and become a separate daughter cell after nuclear division, cytokinesis, and cell wall formation (when appropriate). The daughter cell may completely separate from the mother cell, or the mother and daughter cells may remain associated.","definition_xrefs":["GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cellular bud","termid":"GO:0005933"}


id: PBO:0005332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human Leydig cell tumor 10 kDa protein homolog","termid":"PBO:0005332"}


id: PBO:0060139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA translation optimization 1","termid":"PBO:0060139"}


id: MONDO:0011812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome of multiple congenital anomalies and is characterized by ocular manifestations (uni- or bilateral Duane anomaly (95% of cases), congenital optic nerve hypoplasia or optic disk coloboma), bilateral deafness and radial ray malformation that can include thenar hypoplasia and/or hypoplasia or aplasia of the thumbs; hypoplasia or aplasia of the radii; shortening and radial deviation of the forearms; triphalangeal thumbs; and duplication of the thumb (preaxial polydactyly).The phenotype overlaps with other SALL4>/i> related disorders including acro-renal-ocular syndrome and Holt-Oram syndrome (see these terms). Transmission is autosomal dominant.","definition_xrefs":["Orphanet:93293"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"Duane-radial ray syndrome","secondary_identifiers":["GARD:9182","DOID:0060747","MEDGEN:301647","SCTID:699867001","OMIM:607323","ICD9:759.89","Orphanet:959","SCTID:720415006","UMLS:C1623209"],"synonyms":[{"name":"DR syndrome","type":"exact"},{"name":"DRRS","type":"exact"},{"name":"Duane anomaly with radial abnormalities and deafness","type":"related"},{"name":"Duane anomaly with radial ray abnormalities and deafness","type":"exact"},{"name":"Duane-radial ray syndrome","type":"exact"},{"name":"Okihiro syndrome","type":"exact"},{"name":"acro-renal-ocular syndrome","type":"exact"},{"name":"acrorenocular syndrome","type":"exact"}],"termid":"MONDO:0011812","xrefs":{"Monarch":{"xref_id":"0011812"}}}


id: GO:0007565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth.","definition_xrefs":["ISBN:0192800825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-organism reproductive process","termid":"GO:0044703"},{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female pregnancy","secondary_identifiers":["Wikipedia:Gestation"],"synonyms":[{"name":"carrying of young","type":"related"},{"name":"gestation","type":"exact"}],"termid":"GO:0007565"}


id: MONDO:0034021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"linkeropathy","termid":"MONDO:1040022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondylodysplastic Ehlers-Danlos syndrome","secondary_identifiers":["UMLS:C5680154","Orphanet:536471","MEDGEN:1814455","GARD:22214"],"synonyms":[{"name":"spondylodysplastic EDS","type":"exact"}],"termid":"MONDO:0034021","xrefs":{"Monarch":{"xref_id":"0034021"}}}


id: PBO:0044472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 11 subfamily B member 1","termid":"PBO:0044472"}


id: GO:0032461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of protein oligomerization","termid":"GO:0032459"},{"relation_name":"positively_regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of protein oligomerization","synonyms":[{"name":"activation of protein oligomerization","type":"narrow"},{"name":"induction of protein oligomerization","type":"related"},{"name":"stimulation of protein oligomerization","type":"narrow"},{"name":"up regulation of protein oligomerization","type":"exact"},{"name":"up-regulation of protein oligomerization","type":"exact"},{"name":"upregulation of protein oligomerization","type":"exact"}],"termid":"GO:0032461"}


id: PBO:0004036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E/phosphatidylinositol(3)-phosphate binding protein (predicted)","termid":"PBO:0004036"}


id: MONDO:0035398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypomyelination of early myelinating structures (obsolete MONDO:0035398)","secondary_identifiers":["Orphanet:599376"],"synonyms":[{"name":"HEMS","type":"exact"}],"termid":"MONDO:0035398","xrefs":{"Monarch":{"xref_id":"0035398"}}}


id: PBO:0117089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP5C antisense RNA 1","termid":"PBO:0117089"}


id: PR:P0CT53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef101 gene.","definition_xrefs":["UniProtKB:P0CT53","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-alpha-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.09c","synonyms":[{"name":"EF-1-alpha-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef101","type":"exact"}],"termid":"PR:P0CT53"}


id: GO:0010299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of cobalt ion (Co2+). These include transport of cobalt away from sensitive areas and to compartments or complexes whose purpose is sequestration of cobalt ion.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"response to cobalt ion","termid":"GO:0032025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of cobalt ion","termid":"GO:0010299"}


id: PBO:0001325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Elf1","termid":"PBO:0001325"}


id: PR:O74443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- laf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIRM domain-containing protein laf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.13","synonyms":[{"name":"Spom972h-laf2","type":"exact"},{"name":"clr6 L-associated factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74443"}


id: PR:O74982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced death protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.04","synonyms":[{"name":"Spom972h-cid2","type":"exact"}],"termid":"PR:O74982"}


id: MONDO:0014877
data:
  {"annotated_genes":["SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87918],"is_not":false,"summary":null,"term":"MONDO:0014877"}]},"cv_name":"mondo","definition":"Any distal myopathy in which the cause of the disease is a mutation in the ADSSL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal myopathy","termid":"MONDO:0018949"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, distal, 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1798944","Orphanet:482601","UMLS:C5567521","GARD:17878","OMIM:617030"],"synonyms":[{"name":"ADSSL1 distal myopathy","type":"exact"},{"name":"ADSSL1-related distal myopathy","type":"exact"},{"name":"MPD5","type":"exact"},{"name":"adenylosuccinate synthetase-like 1-related distal myopathy","type":"exact"},{"name":"distal myopathy caused by mutation in ADSSL1","type":"exact"},{"name":"myopathy, distal, 5; MPD5","type":"exact"},{"name":"myopathy, distal, type 5","type":"exact"}],"termid":"MONDO:0014877","terms_by_termid":{"MONDO:0014877":null},"xrefs":{"Monarch":{"xref_id":"0014877"}}}


id: PBO:0077718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 2","termid":"PBO:0077718"}


id: PBO:0034492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_biological_process","termid":"PBO:0034492"}


id: GO:0050529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + polyneuridine aldehyde = 16-epivellosimine + CO2 + methanol.","definition_xrefs":["EC:3.1.1.78","RHEA:17501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"polyneuridine-aldehyde esterase activity","secondary_identifiers":["MetaCyc:3.1.1.78-RXN","KEGG_REACTION:R05825"],"synonyms":[{"name":"PNAE activity","type":"related"},{"name":"polyneuridine aldehyde esterase activity","type":"related"},{"name":"polyneuridine aldehyde hydrolase (decarboxylating)","type":"related"}],"termid":"GO:0050529"}


id: PBO:0065665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type N2","termid":"PBO:0065665"}


id: PBO:0027449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_spindle_pole_body_morphology_during_meiosis_II","termid":"PBO:0027449"}


id: PBO:0076921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor B2, mitochondrial","termid":"PBO:0076921"}


id: GO:2000861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of estrogen secretion","synonyms":[{"name":"regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000861"}


id: GO:0140934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A deubiquitinase that cleaves ubiquitin from a histone protein to which it is conjugated.","definition_xrefs":["PMID:18206972","PMID:18226187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0008233","GO:0140096"],"is_obsolete":false,"name":"histone deubiquitinase activity","synonyms":[{"name":"histone deubiquitination","type":"related"}],"termid":"GO:0140934"}


id: PBO:0079265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC36 and KMT2A antisense RNA 1","termid":"PBO:0079265"}


id: MONDO:0007715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic poikilocytic anemia due to reduced ankyrin binding sites","secondary_identifiers":["UMLS:C1841622","OMIM:141700","MESH:C564197","MEDGEN:330649"],"synonyms":[{"name":"hemolytic poikilocytic anemia due to reduced ankyrin binding sites","type":"exact"}],"termid":"MONDO:0007715","xrefs":{"Monarch":{"xref_id":"0007715"}}}


id: PBO:0116797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily D member 6 (gene/pseudogene)","termid":"PBO:0116797"}


id: PBO:0082642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of mRNP complexes associated with polyribosomes; involved in localization of mRNAs to P bodies; implicated in secretion and nuclear segregation; multicopy suppressor of BFA (Brefeldin A) sensitivity","termid":"PBO:0082642"}


id: PBO:0003794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Esf2 (predicted)","termid":"PBO:0003794"}


id: PBO:0088791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase (human ERCC2) subunit Rad15","termid":"PBO:0088791"}


id: GO:0102641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-propane-1,2-diol + NADP = (R)-lactaldehyde + NADPH + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(R)-lactaldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-15743"],"termid":"GO:0102641"}


id: GO:0042389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the introduction of an omega-3 double bond into the fatty acid hydrocarbon chain.","definition_xrefs":["PMID:9037020","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"omega-3 fatty acid desaturase activity","termid":"GO:0042389"}


id: PBO:0058971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modulator of VRAC current 1","termid":"PBO:0058971"}


id: GO:1902880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of BMP signaling pathway involved in spinal cord association neuron specification.","definition_xrefs":["PMID:21730158","GO_REF:0000058","GOC:mr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of BMP signaling pathway involved in spinal cord association neuron specification (obsolete GO:1902880)","synonyms":[{"name":"activation of BMP signaling pathway involved in spinal cord association neuron specification","type":"narrow"},{"name":"activation of BMP signalling pathway involved in spinal cord association neuron specification","type":"narrow"},{"name":"activation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"narrow"},{"name":"activation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"narrow"},{"name":"positive regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"positive regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"positive regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"up regulation of BMP signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"up regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"up regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"up regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"up-regulation of BMP signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"up-regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"up-regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"up-regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"upregulation of BMP signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"upregulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"upregulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"upregulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"}],"termid":"GO:1902880"}


id: GO:0070640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D3, (3S,5Z,7E)-9,10-secocholesta-5,7,10(19)-trien-3-ol.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vitamin D3 metabolic process","synonyms":[{"name":"calciol metabolic process","type":"exact"},{"name":"cholecalciferol metabolic process","type":"exact"},{"name":"vitamin D3 metabolism","type":"exact"}],"termid":"GO:0070640"}


id: PBO:0070439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPH3AL antisense RNA 2","termid":"PBO:0070439"}


id: PR:O43058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead protein sep1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.12","synonyms":[{"name":"Spom972h-sep1","type":"exact"}],"termid":"PR:O43058"}


id: GO:0100051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates meiotic nuclear division.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of meiotic nuclear division by transcription from RNA polymerase II promoter (obsolete GO:0100051)","termid":"GO:0100051"}


id: PBO:0029126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0029126"}


id: FYPO:0007336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at the silent mating-type cassettes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"},{"relation_name":"is_a","term_name":"abolished chromatin silencing","termid":"FYPO:0007333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished chromatin silencing at silent mating-type cassette","synonyms":[{"name":"abolished chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"abolished chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"chromatin silencing at silent mating-type cassette abolished","type":"exact"}],"termid":"FYPO:0007336"}


id: PBO:0003932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein (predicted)","termid":"PBO:0003932"}


id: GO:0046240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete xylene biosynthetic process (obsolete GO:0046240)","synonyms":[{"name":"xylene anabolism","type":"exact"},{"name":"xylene biosynthesis","type":"exact"},{"name":"xylene biosynthetic process","type":"exact"},{"name":"xylene formation","type":"exact"},{"name":"xylene synthesis","type":"exact"}],"termid":"GO:0046240"}


id: GO:0097333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an olanzapine stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to olanzapine","termid":"GO:0097333"}


id: PR:Q9P6L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6L8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.08","synonyms":[{"name":"Spom972h-srb8","type":"exact"},{"name":"mediator complex subunit 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B srb8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6L8"}


id: MONDO:1011003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polymicrogyria that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymicrogyria, non-human animal","termid":"MONDO:1010237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymicrogyria, cattle","secondary_identifiers":["OMIA:001100-9913"],"termid":"MONDO:1011003","xrefs":{"Monarch":{"xref_id":"1011003"}}}


id: PBO:0040057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 5","termid":"PBO:0040057"}


id: PBO:0082147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA:sterol acyltransferase; endoplasmic reticulum enzyme that contributes the major sterol esterification activity in the presence of oxygen; ARE2 has a paralog, ARE1, that arose from the whole genome duplication","termid":"PBO:0082147"}


id: PBO:0034422
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_cell_(obsolete_has_target_cell)","termid":"PBO:0034422"}


id: PBO:0065348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRXL2C pseudogene 1","termid":"PBO:0065348"}


id: PBO:0063577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 apoptosis effector related to PMP22","termid":"PBO:0063577"}


id: PATO:0002055
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fragility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fragile","termid":"PATO:0001362"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fragility","termid":"PATO:0002055"}


id: MONDO:0100060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital/infantile spindle cell rhabdomyosarcoma characterized by the presence of gene fusions involving the VGLL2, SRF, TEAD1, NCOA2, and CITED2 genes.","definition_xrefs":["NCIT:C178232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell rhabdomyosarcoma","termid":"MONDO:0002581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"congenital/infantile spindle cell rhabdomyosarcoma with VGLL2/NCOA2/CITED2 rearrangements","secondary_identifiers":["UMLS:C5554884","MEDGEN:1791325"],"termid":"MONDO:0100060","xrefs":{"Monarch":{"xref_id":"0100060"}}}


id: SO:0001368
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carbamoylmethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carbamoylmethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:076"],"synonyms":[{"name":"5-carbamoylmethyl-2'-O-methyluridine","type":"exact"},{"name":"five carbamoylmethyl two prime O methyluridine","type":"exact"},{"name":"ncm5Um","type":"exact"}],"termid":"SO:0001368"}


id: MONDO:0002662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete plague (obsolete MONDO:0002662)","termid":"MONDO:0002662","xrefs":{"Monarch":{"xref_id":"0002662"}}}


id: PBO:0034629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_centromere_clustering_with_centromeres_dissociated_from_spindle_pole_body","termid":"PBO:0034629"}


id: GO:0098623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: SeO3(2-) + 3 NADPH + 5H+ = H2Se +  3NADP+ + 3H2O.","definition_xrefs":["PMID:1321713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"selenite reductase (NADPH) activity","secondary_identifiers":["Reactome:R-HSA-2408558"],"synonyms":[{"name":"selenite reductase activity","type":"exact"}],"termid":"GO:0098623"}


id: PBO:0071686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 18","termid":"PBO:0071686"}


id: MOD:01957
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 2-hydroxyproline.","definition_xrefs":["ChEBI:141809","RESID:AA0602","PubMed:23385463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyproline","synonyms":[{"name":"(2R)-2-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"2-hydroxyproline","type":"exact"},{"name":"2-oxidanylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"MOD_RES 2-hydroxyproline","type":"exact"},{"name":"alpha-hydroxyproline","type":"exact"}],"termid":"MOD:01957"}


id: PBO:0081983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 9","termid":"PBO:0081983"}


id: MONDO:0006913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute purulent infection of the meninges and subarachnoid space caused by Streptococcus pneumoniae, most prevalent in children and adults over the age of 60. This illness may be associated with otitis media; mastoiditis; sinusitis; respiratory tract infections; sickle cell disease (anemia, sickle cell); skull fractures; and other disorders. Clinical manifestations include fever; headache; neck stiffness; and somnolence followed by seizures; focal neurologic deficits (notably deafness); and coma. (From Miller et al., Merritt's Textbook of Neurology, 9th ed, p111)","definition_xrefs":["MESH:D008586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"streptococcal meningitis","termid":"MONDO:0001316"},{"relation_name":"is_a","term_name":"pneumococcal infection","termid":"MONDO:0005114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumococcal meningitis","secondary_identifiers":["MedDRA:10035645","ICD9:320.1","MEDGEN:44354","NCIT:C157958","UMLS:C0025295","ICD10CM:G00.1","EFO:1001114","SCTID:51169003","Orphanet:55655","GARD:18849","MedDRA:10027253"],"synonyms":[{"name":"Streptococcus pneumoniae caused infectious meningitis","type":"exact"},{"name":"Streptococcus pneumoniae infectious meningitis","type":"exact"}],"termid":"MONDO:0006913","xrefs":{"Monarch":{"xref_id":"0006913"}}}


id: MONDO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An occupational lung disorder caused by inhalation of bagasse dust. In the acute phase, it manifests as cough, dyspnea, fever, chills, and weakness. Chronic exposure may lead to interstitial lung fibrosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"bagassosis","secondary_identifiers":["MESH:D011009","SCTID:67242002","MEDGEN:2539","UMLS:C0004681","ICD9:495.1","DOID:12522","NCIT:C34409","icd11.foundation:1123061945","ICD10CM:J67.1"],"synonyms":[{"name":"bagasse extrinsic allergic alveolitis","type":"exact"},{"name":"bagasse workers lung","type":"exact"},{"name":"extrinsic allergic alveolitis from bagasse","type":"exact"},{"name":"sugar cane worker pneumonitis","type":"exact"}],"termid":"MONDO:0001540","xrefs":{"Monarch":{"xref_id":"0001540"}}}


id: GO:0010372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"positive regulation of gibberellin biosynthetic process","synonyms":[{"name":"positive regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010372"}


id: PBO:0049488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.10 linker histone","termid":"PBO:0049488"}


id: PBO:0070187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 105 pseudogene","termid":"PBO:0070187"}


id: PBO:0088990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1/2 complex WD repeat protein Pop3/Wat1/Lst8","termid":"PBO:0088990"}


id: PBO:0003535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylglutamate synthase Arg6 (predicted)","termid":"PBO:0003535"}


id: PBO:0050304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 6","termid":"PBO:0050304"}


id: MONDO:1011957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypochondroplastic dwarfism, non-human animal","secondary_identifiers":["OMIA:001296"],"termid":"MONDO:1011957","xrefs":{"Monarch":{"xref_id":"1011957"}}}


id: PBO:0039088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin II receptor type 2","termid":"PBO:0039088"}


id: PBO:0038747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 4 pseudogene 2","termid":"PBO:0038747"}


id: MONDO:0011735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Hyper IgM syndrome characterized by mutations of the CD40 gene. In this type, Immature B cells cannot receive signal 2 from helper T cells which is necessary to mature into mature B cells.","definition_xrefs":["Wikipedia:Hyper-IgM_syndrome_type_3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgM syndrome","termid":"MONDO:0003947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hyper-IgM syndrome type 3","secondary_identifiers":["Orphanet:101090","OMIM:606843","UMLS:C1720957","GARD:10579","MEDGEN:328419","DOID:0060023"],"synonyms":[{"name":"CD40 deficiency","type":"related"},{"name":"CD40 hyper-IgM syndrome","type":"exact"},{"name":"HIGM3","type":"exact"},{"name":"hyper IgM syndrome 3","type":"related"},{"name":"hyper-IgM syndrome 3","type":"related"},{"name":"hyper-IgM syndrome caused by mutation in CD40","type":"exact"},{"name":"hyper-IgM syndrome due to CD40 deficiency","type":"exact"},{"name":"immunodeficiency with hyper IgM type 3","type":"related"},{"name":"immunodeficiency with hyper-IgM type 3","type":"exact"},{"name":"immunodeficiency with hyper-IgM, type 3","type":"related"},{"name":"type 3 hyper-IgM immunodeficiency","type":"exact"}],"termid":"MONDO:0011735","xrefs":{"Monarch":{"xref_id":"0011735"}}}


id: PBO:0063115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase 1 pseudogene 2","termid":"PBO:0063115"}


id: PBO:0017958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex ubiquitin-protein ligase E3 subunit Gid2/Rmd5 (predicted)","termid":"PBO:0017958"}


id: MONDO:0020322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute leukemia of ambiguous lineage characterized by blasts which coexpress myeloid and T or B lineage antigens or concurrent B and T lineage antigens. (WHO, 2001)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"primary bone lymphoma","termid":"MONDO:0017814"},{"relation_name":"is_a","term_name":"mixed phenotype acute leukemia","termid":"MONDO:0020743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute biphenotypic leukemia","secondary_identifiers":["ICDO:9805/3","Orphanet:98837","MedDRA:10067399","MESH:D015456","NCIT:C4673","SCTID:278453007","MEDGEN:7318","UMLS:C0023464","DOID:9953","ICD9:207.80","EFO:1000828"],"synonyms":[{"name":"B- and T-cell mixed leukaemia","type":"exact"},{"name":"B- and T-cell mixed leukemia","type":"exact"}],"termid":"MONDO:0020322","xrefs":{"Monarch":{"xref_id":"0020322"}}}


id: PR:P21547
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- var1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P21547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein var1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.08","synonyms":[{"name":"Spom972h-var1","type":"exact"}],"termid":"PR:P21547"}


id: PATO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's resembling a sponge in elasticity, absorbency, or porousness.","definition_xrefs":["Answers.com:Answers.com"],"direct_ancestors":[{"relation_name":"has_part","term_name":"permeable","termid":"PATO:0000982"},{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spongy","termid":"PATO:0001480"}


id: MONDO:1011991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod dysplasia, non-human animal","secondary_identifiers":["OMIA:001670"],"termid":"MONDO:1011991","xrefs":{"Monarch":{"xref_id":"1011991"}}}


id: PBO:0086089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase; involved in downregulation of the unfolded protein response (UPR), at least in part through dephosphorylation of Ire1p; dosage-dependent positive regulator of the G1/S phase transition through control of the timing of START; physically interacts with, dephosphorylates and destabilizes Sic1p; SWAT-GFP and mCherry fusion proteins localize to the vacuole","termid":"PBO:0086089"}


id: PBO:0069092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 339, pseudogene","termid":"PBO:0069092"}


id: GO:0055016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hypochord over time, from its formation to the mature structure. The hypochord is a transient rod-like structure in the embryos of fish, lampreys and amphibians that is located immediately ventral to the notochord. The hypochord may play a role in positioning the dorsal aorta.","definition_xrefs":["GOC:lb","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypochord development","synonyms":[{"name":"subnotochordal rod development","type":"exact"}],"termid":"GO:0055016"}


id: GO:0046596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the viral entry into the host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral entry into host cell","synonyms":[{"name":"regulation of viral penetration into host cell","type":"exact"},{"name":"viral escort protein","type":"related"}],"termid":"GO:0046596"}


id: PBO:0046699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS2 antisense RNA 1","termid":"PBO:0046699"}


id: PBO:0071585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 1","termid":"PBO:0071585"}


id: GO:0034845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: naphthyl-2-methyl-succinyl-CoA = naphthyl-2-methylene-succinyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1258"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthyl-2-methyl-succinyl-CoA dehydrogenase activity (obsolete GO:0034845)","termid":"GO:0034845"}


id: GO:1902117
data:
  {"annotated_genes":["SJAG_02332","SJAG_00718","SJAG_03048","SJAG_01837","SJAG_03851","SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110505,110598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[91474,104273,118660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[113398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of organelle assembly.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"positively_regulates","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_03851":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of organelle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of organelle assembly","type":"narrow"},{"name":"up regulation of organelle assembly","type":"exact"},{"name":"up-regulation of organelle assembly","type":"exact"},{"name":"upregulation of organelle assembly","type":"exact"}],"termid":"GO:1902117","terms_by_termid":{"GO:0110161":null,"GO:1905561":null,"GO:2000786":null}}


id: PBO:0070322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 11","termid":"PBO:0070322"}


id: PBO:0004184
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exchange Factor Cdc25-like","termid":"PBO:0004184"}


id: PBO:0063083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate synthase 2","termid":"PBO:0063083"}


id: PBO:0085540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9B has a paralog, RPS9A, that arose from the whole genome duplication","termid":"PBO:0085540"}


id: MONDO:0006788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hydrophthalmos (obsolete MONDO:0006788)","termid":"MONDO:0006788","xrefs":{"Monarch":{"xref_id":"0006788"}}}


id: MONDO:0026722
data:
  {"annotated_genes":["SJAG_03698","SJAG_03418"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87724,87725],"is_not":false,"summary":null,"term":"MONDO:0026722"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03418":null,"SJAG_03698":null},"genotype_count":0,"is_obsolete":false,"name":"Mullegama-Klein-Martinez syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111845","MEDGEN:1683985","OMIM:301022","UMLS:C5193008"],"synonyms":[{"name":"MKMS","type":"related"},{"name":"MULLEGAMA-KLEIN-MARTINEZ SYNDROME","type":"related"},{"name":"Neurodevelopmental Disorder, X-Linked, With Craniofacial Abnormalities","type":"related"}],"termid":"MONDO:0026722","terms_by_termid":{"MONDO:0026722":null},"xrefs":{"Monarch":{"xref_id":"0026722"}}}


id: GO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage between the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000483"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000474"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000484"}


id: PBO:0087736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; the SMC5-SMC6 complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; binds single-stranded DNA and has ATPase activity; supports nucleolar function; S. pombe homolog forms a heterodimer with S. pombe Rad18p that is involved in DNA repair","termid":"PBO:0087736"}


id: PBO:0086892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane protein involved in the biotin biosynthesis; responsible for uptake of 7-keto 8-aminopelargonic acid; BIO5 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis","termid":"PBO:0086892"}


id: PBO:0052661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 29","termid":"PBO:0052661"}


id: GO:0009190
data:
  {"annotated_genes":["SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66266],"is_not":false,"summary":null,"term":"GO:0009190"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"cyclic nucleotide metabolic process","termid":"GO:0009187"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"cyclic nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"cyclic nucleotide anabolism","type":"exact"},{"name":"cyclic nucleotide biosynthesis","type":"exact"},{"name":"cyclic nucleotide formation","type":"exact"},{"name":"cyclic nucleotide synthesis","type":"exact"}],"termid":"GO:0009190","terms_by_termid":{"GO:0009190":null}}


id: PBO:0029031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_telomere","termid":"PBO:0029031"}


id: GO:0052833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:1D-myo-inositol 4-phosphate + H2O = myo-inositol + phosphate.","definition_xrefs":["RHEA:30735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol monophosphate phosphatase activity","termid":"GO:0052834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inositol monophosphate 4-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855211","MetaCyc:RXN-10952"],"synonyms":[{"name":"inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"myo-inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"myo-inositol-1(or 4)-phosphate phosphohydrolase activity","type":"broad"}],"termid":"GO:0052833"}


id: GO:0061421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving oleic acid that activates or increases the rate of transcription.","definition_xrefs":["GOC:dph","PMID:20395639"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription by oleic acid (obsolete GO:0061421)","termid":"GO:0061421"}


id: GO:0006538
data:
  {"annotated_genes":["SJAG_00937","SJAG_03434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81413,93546],"is_not":false,"summary":null,"term":"GO:0006538"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate, the anion of 2-aminopentanedioic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00937":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"glutamate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0019459"],"synonyms":[{"name":"glutamate breakdown","type":"exact"},{"name":"glutamate catabolism","type":"exact"},{"name":"glutamate deamidation","type":"related"},{"name":"glutamate degradation","type":"exact"},{"name":"glutamic acid catabolic process","type":"exact"},{"name":"glutamic acid catabolism","type":"exact"}],"termid":"GO:0006538","terms_by_termid":{"GO:0006538":null}}


id: MONDO:0006963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the sebaceous glands. Representative examples include sebaceous adenoma and sebaceous carcinoma.","definition_xrefs":["NCIT:C3363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sebaceous gland neoplasm","secondary_identifiers":["ICD9:239.2","EFO:1001172","MEDGEN:19911","SCTID:126491004","UMLS:C0036503","MESH:D012626","DOID:5759"],"synonyms":[{"name":"neoplasm of sebaceous gland","type":"exact"},{"name":"sebaceous gland neoplasm","type":"exact"},{"name":"sebaceous gland neoplasm (disease)","type":"exact"},{"name":"sebaceous gland tumor","type":"exact"},{"name":"sebaceous gland tumour","type":"exact"},{"name":"sebaceous neoplasm","type":"exact"},{"name":"sebaceous tumor","type":"exact"},{"name":"sebaceous tumour","type":"exact"},{"name":"tumor of sebaceous gland","type":"exact"},{"name":"tumour of sebaceous gland","type":"exact"}],"termid":"MONDO:0006963","xrefs":{"Monarch":{"xref_id":"0006963"}}}


id: MONDO:0700205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehrlichiosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease, non-human animal","termid":"MONDO:0700113"},{"relation_name":"is_a","term_name":"tick-borne infectious disease, non-human animal","termid":"MONDO:0700201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ehrlichiosis, non-human animal","termid":"MONDO:0700205","xrefs":{"Monarch":{"xref_id":"0700205"}}}


