# terms

id: FYPO:0003911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A translation phenotype in which a tRNA pairs with mRNA at the stop codon UGA, and incorporates an amino acid residue into the nascent polypeptide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"UGA suppression","synonyms":[{"name":"UGA suppressor","type":"exact"},{"name":"opal suppression","type":"exact"},{"name":"opal suppressor","type":"exact"}],"termid":"FYPO:0003911"}


id: PBO:0004440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic threonine-tRNA ligase Trs1 (predicted)","termid":"PBO:0004440"}


id: FYPO:0007798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments occurs to a greater extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-protein interaction","termid":"FYPO:0001571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased actin filament binding","synonyms":[{"name":"increased F-actin binding","type":"exact"},{"name":"increased filamentous actin binding","type":"related"},{"name":"increased protein-protein interaction with actin filament","type":"exact"}],"termid":"FYPO:0007798"}


id: FYPO:0005288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription by glucose (glucose repression) occurs to a lower extent than normal. Specific genes that are normally not transcribed in the presence of glucose are transcribed in the mutant.","definition_xrefs":["PomBase:mah","GO:0045014","PMID:18430926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription by glucose","termid":"FYPO:0000044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased negative regulation of transcription by glucose","synonyms":[{"name":"decreased glucose repression","type":"exact"},{"name":"decreased glucose repression during vegetative growth","type":"exact"},{"name":"decreased negative regulation of transcription by glucose during mitotic cell cycle","type":"related"},{"name":"decreased negative regulation of transcription by glucose during vegetative growth","type":"exact"},{"name":"glucose repression defects","type":"related"},{"name":"glucose-insensitive transcription","type":"related"},{"name":"increased transcription of glucose starvation gene during vegetative growth","type":"related"}],"termid":"FYPO:0005288"}


id: GO:0005588
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type V alpha chains; [alpha1(V)]2alpha2(V) and alpha1(V)alpha2(V)alpha3(V) trimers have been observed; type V collagen triple helices associate to form fibrils.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type V trimer","termid":"GO:0005588"}


id: MONDO:0013894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extremely rare primordial dwarfism characterized by short stature, onychodysplasia, facial dysmorphism and hypotrichosis, which is caused by biallelic mutations in the POC1A gene.","definition_xrefs":["PMID:26791357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-onychodysplasia-facial dysmorphism-hypotrichosis syndrome","secondary_identifiers":["Orphanet:314394","GARD:17419","OMIM:614813","MEDGEN:762199","UMLS:C3542022"],"synonyms":[{"name":"short stature, onychodysplasia, facial dysmorphism, and hypotrichosis","type":"related"},{"name":"soft","type":"related"},{"name":"soft syndrome","type":"exact"}],"termid":"MONDO:0013894","xrefs":{"Monarch":{"xref_id":"0013894"}}}


id: FYPO:0004165
data:
  {"alleles_by_uniquename":{"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121528],"is_not":false,"summary":null,"term":"FYPO:0004165"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of glucose consumed by cells in a given time is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":1,"genotypes_by_uniquename":{"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal glucose consumption","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02796"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal glucose consumption during mitotic cell cycle","type":"related"},{"name":"normal glucose consumption during vegetative growth","type":"exact"},{"name":"normal glucose uptake","type":"related"}],"termid":"FYPO:0004165","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0004165":null}}


id: MONDO:0009517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leprechaunism is a congenital form of extreme insulin resistance (a group of syndromes that also includes Rabson-Mensenhall syndrome, type A insulin-resistance syndrome, and acquired type B insulin-resistance syndrome) characterized by intrauterine and mainly postnatal severe growth retardation.","definition_xrefs":["Orphanet:508"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"excluded_subClassOf","term_name":"hypertrichosis","termid":"MONDO:0019280"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Donohue syndrome","secondary_identifiers":["MEDGEN:82708","SCTID:33559001","UMLS:C0265344","DOID:0050470","GARD:6885","MESH:D056731","NCIT:C84676","OMIM:246200","SCTID:111307005","ICD9:259.8"],"synonyms":[{"name":"Donohue syndrome","type":"exact"},{"name":"Leprechaunism","type":"exact"},{"name":"insulin receptor, defect 1N","type":"related"},{"name":"leprechaunism","type":"exact"}],"termid":"MONDO:0009517","xrefs":{"Monarch":{"xref_id":"0009517"}}}


id: PATO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's standing out or projecting beyond a surface or line.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominent","termid":"PATO:0001482"}


id: PBO:0073357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family E member 1","termid":"PBO:0073357"}


id: MONDO:0011004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by severe microcephaly, agyria, agenesis of the corpus callosum, cerebellar hypoplasia, facial dysmorphology and epiphyseal stippling of the metacarpal bones. It has been described in two brothers. The syndrome is transmitted as an autosomal recessive trait and may be an allelic variant of Neu-Laxova syndrome and Lissencephaly type III with cystic dilations of the cerebellum and fetal akinesia sequence.","definition_xrefs":["Orphanet:86822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly type 3","termid":"MONDO:0015148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly type 3-metacarpal bone dysplasia syndrome","secondary_identifiers":["OMIM:601160","SCTID:718720007","MEDGEN:371379","UMLS:C1832678","GARD:16763","MESH:C563383"],"synonyms":[{"name":"lissencephaly type 3 and bone dysplasia","type":"related"},{"name":"lissencephaly type III and bone dysplasia","type":"related"}],"termid":"MONDO:0011004","xrefs":{"Monarch":{"xref_id":"0011004"}}}


id: PBO:0070005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1301, pseudogene","termid":"PBO:0070005"}


id: PBO:0089697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, human NT5E family","termid":"PBO:0089697"}


id: PBO:0030853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_kinase_activity","termid":"PBO:0030853"}


id: MONDO:0958263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated micronodular adrenocortical disease","secondary_identifiers":["Orphanet:647782","UMLS:C5816756","MEDGEN:1853162"],"termid":"MONDO:0958263","xrefs":{"Monarch":{"xref_id":"0958263"}}}


id: PBO:0033772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pointed_nucleus_during_mitotic_interphase","termid":"PBO:0033772"}


id: PBO:0060729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit AB1 pseudogene 1","termid":"PBO:0060729"}


id: MOD:00956
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norleucine residue (Nle)","termid":"MOD:01026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misincorporation of norleucine for methionine","termid":"MOD:00956"}


id: MONDO:0044986
data:
  {"annotated_genes":["SJAG_00993","SJAG_02648","SJAG_02342","SJAG_03453","SJAG_01697","SJAG_03536","SJAG_02923","SJAG_00570","SJAG_01407","SJAG_01181","SJAG_02453","SJAG_04745","SJAG_02572"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[87491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[88437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[87795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[88290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[88142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[88732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[88016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[88009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[89071,89072,89073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"}]},"cv_name":"mondo","definition":"A disease or disorder that involves the lymphoid system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01407":null,"SJAG_01697":null,"SJAG_02342":null,"SJAG_02453":null,"SJAG_02572":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphoid system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:111590001","UMLS:C0024228","MEDGEN:9829"],"synonyms":[{"name":"disease of lymphoid system","type":"exact"},{"name":"disease or disorder of lymphoid system","type":"exact"},{"name":"disorder of lymphoid system","type":"exact"},{"name":"lymphoid system disease","type":"exact"},{"name":"lymphoid system disease or disorder","type":"exact"}],"termid":"MONDO:0044986","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0009756":null,"MONDO:0011257":null,"MONDO:0011336":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0012371":null,"MONDO:0013135":null,"MONDO:0013186":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0044986"}}}


id: MONDO:0014597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary immunodeficiency disease in which the cause of the disease is a mutation in the IRF7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 39","secondary_identifiers":["ICD10CM:D84.8","Orphanet:574918","DOID:0111969","OMIM:616345","SCTID:1269234000","UMLS:C4225358","MEDGEN:904167"],"synonyms":[{"name":"IMD39","type":"related"},{"name":"IRF7 primary immunodeficiency disease","type":"exact"},{"name":"immunodeficiency 39","type":"exact"},{"name":"immunodeficiency type 39","type":"exact"},{"name":"predisposition to severe viral infection due to IRF7 deficiency","type":"exact"},{"name":"primary immunodeficiency disease caused by mutation in IRF7","type":"exact"}],"termid":"MONDO:0014597","xrefs":{"Monarch":{"xref_id":"0014597"}}}


id: GO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Growth of a pathogenic organism that results in penetration into cells or tissues of the host organism. This often (but not necessarily) includes a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue.","definition_xrefs":["PMID:9728395","GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete invasive growth (obsolete GO:0001404)","synonyms":[{"name":"invasive growth","type":"exact"},{"name":"tissue invasion","type":"exact"}],"termid":"GO:0001404"}


id: GO:0044074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism stops, prevents, or reduces the frequency, rate or extent of translation, the chemical reactions and pathways resulting in the formation of a protein, in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host translation (obsolete GO:0044074)","synonyms":[{"name":"negative regulation of host translation by symbiont","type":"exact"}],"termid":"GO:0044074"}


id: PBO:0078444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining 2","termid":"PBO:0078444"}


id: GO:0090151
data:
  {"annotated_genes":["SJAG_00569","SJAG_02797","SJAG_03502","SJAG_01640","SJAG_05300","SJAG_05302","SJAG_02034","SJAG_02361","SJAG_00687","SJAG_03633","SJAG_03515","SJAG_02355","SJAG_01405","SJAG_02398","SJAG_02524","SJAG_01120","SJAG_01949","SJAG_03416","SJAG_00404","SJAG_01917","SJAG_01951","SJAG_01780","SJAG_04208","SJAG_04996"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90472,75735,77474,109523,115166,109499,75189,118250,104825,58384,79554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[58509,76236,80331,80392,80065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[100105,111999,59026,78374,71683,112352,113754,100456,109500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the mitochondrial membrane.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01640":null,"SJAG_01780":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02034":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03633":null,"SJAG_04208":null,"SJAG_04996":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007005","GO:0061024"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrial membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"establishment of protein localisation in mitochondrial membrane","type":"exact"},{"name":"establishment of protein localization in mitochondrial membrane","type":"exact"}],"termid":"GO:0090151","terms_by_termid":{"GO:0032979":null,"GO:0045039":null,"GO:0045040":null}}


id: PBO:0044170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin alpha 1","termid":"PBO:0044170"}


id: PBO:0061074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor interacting Ras like 1","termid":"PBO:0061074"}


id: PBO:0079613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 J1","termid":"PBO:0079613"}


id: PBO:0054793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2207","termid":"PBO:0054793"}


id: GO:1901885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-hydroxybenzoyl-CoA.","definition_xrefs":["PMID:19757094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"2-hydroxybenzoyl-CoA metabolic process","synonyms":[{"name":"2-hydroxybenzoyl-CoA metabolism","type":"exact"}],"termid":"GO:1901885"}


id: GO:0070434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 2 (NOD2) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070426"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070432"},{"relation_name":"positively_regulates","term_name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"positive regulation of NOD2 signaling pathway","type":"exact"},{"name":"positive regulation of nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070434"}


id: PBO:0033797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-progressively_decreasing_vegetative_cell_population_growth_rate_followed_by_return_to_normal_growth_rate","termid":"PBO:0033797"}


id: PBO:0068071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 376","termid":"PBO:0068071"}


id: PBO:0054495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1895","termid":"PBO:0054495"}


id: MONDO:0007744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperlipidemia","termid":"MONDO:0001336"},{"relation_name":"is_a","term_name":"hyperalphalipoproteinemia","termid":"MONDO:0015903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"cholesterol-ester transfer protein deficiency","secondary_identifiers":["MEDGEN:840020","Orphanet:79506","UMLS:C3875011","OMIM:143470","SCTID:15771000119109","DOID:0111369","GARD:16724"],"synonyms":[{"name":"CEPT deficiency","type":"exact"},{"name":"CETP deficiency","type":"related"},{"name":"HALP1","type":"related"},{"name":"Hdlcq10","type":"related"},{"name":"cholesterol ester transfer Protein deficiency","type":"related"},{"name":"familial hyperalphalipoproteinemia","type":"exact"},{"name":"high density lipoprotein cholesterol level QTL 10","type":"exact"},{"name":"high density lipoprotein cholesterol level quantitative trait locus 10","type":"related"},{"name":"hyperalphalipoproteinemia","type":"broad"},{"name":"hyperalphalipoproteinemia 1","type":"exact"},{"name":"hyperalphalipoproteinemia type 1","type":"exact"}],"termid":"MONDO:0007744","xrefs":{"Monarch":{"xref_id":"0007744"}}}


id: PBO:0075816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor cysteine rich family member with 5 domains","termid":"PBO:0075816"}


id: PBO:0077831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p63","termid":"PBO:0077831"}


id: MONDO:0019269
data:
  {"annotated_genes":["SJAG_02842","SJAG_02326","SJAG_02085","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87093,87094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014010"},{"annotations":[87677,87676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100221"}]},"cv_name":"mondo","definition":"Disorders of cornification that are characterized by visible scaling and/or hyperkeratosis of most or all of the skin. Inherited ichthyoses, defined as the generalized form of Mendelian disorders of cornification, affect most or all of the skin. This etiologically and phenotypically heterogenous group of conditions is caused by mutations in various different genes important for keratinocyte differentiation and epidermal barrier function. Acquired forms of ichthyosis can be observed with certain autoimmune, inflammatory, metabolic, endocrine, or infectious diseases or with malignancies.","definition_xrefs":["PMID:22739337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02085":null,"SJAG_02326":null,"SJAG_02842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0008064","NCIT:C84776","Orphanet:79354","DOID:1697","MedDRA:10021198","MESH:D007057","GARD:18985","NANDO:1200618","UMLS:C0020757","MEDGEN:7002"],"synonyms":[{"name":"DOC","type":"exact"},{"name":"disorder of cornification","type":"exact"},{"name":"fish scale disease","type":"exact"},{"name":"fish skin disease","type":"exact"},{"name":"ichthyoses","type":"exact"},{"name":"ichthyosis","type":"exact"},{"name":"ichthyosis (disease)","type":"exact"},{"name":"non-syndromic ichthyosis","type":"related"}],"termid":"MONDO:0019269","terms_by_termid":{"MONDO:0014010":null,"MONDO:0100221":null},"xrefs":{"Monarch":{"xref_id":"0019269"}}}


id: PR:Q9UTC8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein OS-9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15414:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein OS-9 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.11c","secondary_identifiers":["UniProtKB:Q9UTC8"],"synonyms":[{"name":"SPAC227.11c","type":"related"},{"name":"Spom972h-OS9","type":"exact"}],"termid":"PR:Q9UTC8"}


id: PBO:0005661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no message in thiamine Nmt1","termid":"PBO:0005661"}


id: MONDO:0032568
data:
  {"annotated_genes":["SJAG_00845","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88189,88190],"is_not":false,"summary":null,"term":"MONDO:0032568"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02878":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with macrocephaly, seizures, and speech delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648339","OMIM:618158","UMLS:C4748428"],"synonyms":[{"name":"IDDMSSD","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH MACROCEPHALY, SEIZURES, AND SPEECH DELAY","type":"related"}],"termid":"MONDO:0032568","terms_by_termid":{"MONDO:0032568":null},"xrefs":{"Monarch":{"xref_id":"0032568"}}}


id: MONDO:0022863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal crystals myopathy neuropathy","termid":"MONDO:0022863","xrefs":{"Monarch":{"xref_id":"0022863"}}}


id: PBO:0030823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chlorpromazine","termid":"PBO:0030823"}


id: PR:O94479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.12c","synonyms":[{"name":"FXNA-related family protease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1919.12c","type":"exact"}],"termid":"PR:O94479"}


id: PBO:0108904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP6 pseudogene 1","termid":"PBO:0108904"}


id: PBO:0068949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 193, pseudogene","termid":"PBO:0068949"}


id: PBO:0004226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic proline-tRNA ligase Prs1 (predicted)","termid":"PBO:0004226"}


id: PBO:0057842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3156-2","termid":"PBO:0057842"}


id: PBO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28 (predicted)","termid":"PBO:0002460"}


id: PR:Q09776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snu23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6.U5 small nuclear ribonucleoprotein component snu23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.11c","synonyms":[{"name":"Spom972h-snu23","type":"exact"}],"termid":"PR:Q09776"}


id: PBO:0110332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PF pseudogene 2","termid":"PBO:0110332"}


id: PBO:0005707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex zeta subunit Ost5 (predicted)","termid":"PBO:0005707"}


id: GO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a parasitic plant that act to protect an organism.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to parasitic plant","termid":"GO:0002241"},{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to parasitic plant","termid":"GO:0002242"}


id: PBO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 33","termid":"PBO:0039517"}


id: PR:O13848
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19G12.09 gene.","definition_xrefs":["UniProtKB:O13848","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD/NADP-dependent indole-3-acetaldehyde reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.09","synonyms":[{"name":"AKR3C2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC19G12.09","type":"exact"}],"termid":"PR:O13848"}


id: PBO:0065707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase 7 like","termid":"PBO:0065707"}


id: GO:0005564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic tRNA (obsolete GO:0005564)","synonyms":[{"name":"cytosolic tRNA","type":"exact"}],"termid":"GO:0005564"}


id: FYPO:0008190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin at the centromere central core is increased during the meiotic prophase I.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at centromere central core during meiotic prophase I","termid":"FYPO:0008190"}


id: PBO:0005523
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled Coil protein Quantitatively enriched","termid":"PBO:0005523"}


id: PBO:0049874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic and glial cell adhesion molecule","termid":"PBO:0049874"}


id: PR:Q10215
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01590","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.07c","secondary_identifiers":["UniProtKB:Q10215"],"synonyms":[{"name":"Spom972h-TSTD1","type":"exact"},{"name":"rhodanese-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10215"}


id: GO:0032323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"lipoate metabolic process","termid":"GO:0009106"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"lipoate catabolic process","synonyms":[{"name":"lipoic acid breakdown","type":"exact"},{"name":"lipoic acid catabolism","type":"exact"},{"name":"lipoic acid degradation","type":"exact"}],"termid":"GO:0032323"}


id: MONDO:0859196
data:
  {"annotated_genes":["SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88049],"is_not":false,"summary":null,"term":"MONDO:0859196"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01809":null},"genotype_count":0,"is_obsolete":false,"name":"Usmani-Riazuddin syndrome, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5561994","MEDGEN:1794204","OMIM:619548"],"termid":"MONDO:0859196","terms_by_termid":{"MONDO:0859196":null},"xrefs":{"Monarch":{"xref_id":"0859196"}}}


id: GO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a dendritic cell in response to an external stimulus.","definition_xrefs":["CL:0000451","PMID:15814331","PMID:16056255","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"dendritic cell migration","termid":"GO:0036336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell chemotaxis","termid":"GO:0002407"}


id: GO:0061380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior colliculus over time, from its formation to the mature structure. The superior colliculus is also known as the optic tectum or simply tectum and is a paired structure that forms a major component of the vertebrate midbrain.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"corpora quadrigemina development","termid":"GO:0061378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior colliculus development","termid":"GO:0061380"}


id: GO:1990371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to phenol.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to phenol (obsolete GO:1990371)","termid":"GO:1990371"}


id: PBO:0024832
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYosin II of Pombe","termid":"PBO:0024832"}


id: PBO:0005783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase beta subunit (predicted)","termid":"PBO:0005783"}


id: MONDO:1012688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in pigs due to a mutation in the HEXA gene.","definition_xrefs":["OMIA:001461-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, pig","termid":"MONDO:1010842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, HEXA-related, pig","synonyms":[{"name":"gangliosidosis, GM2, type I (B variant), pig","type":"related"}],"termid":"MONDO:1012688","xrefs":{"Monarch":{"xref_id":"1012688"}}}


id: GO:0047859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,4-dihydroxy-L-phenylalanine = trans-caffeate + NH3.","definition_xrefs":["EC:4.3.1.11","MetaCyc:DIHYDROXYPHENYLALANINE-AMMONIA-LYASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroxyphenylalanine ammonia-lyase activity (obsolete GO:0047859)","synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine ammonia-lyase (trans-caffeate-forming)","type":"related"},{"name":"3,4-dihydroxy-L-phenylalanine ammonia-lyase activity","type":"related"},{"name":"beta-(3,4-dihydroxyphenyl)-L-alanine (DOPA) ammonia-lyase activity","type":"related"},{"name":"dihydroxyphenylalanine ammonia-lyase activity","type":"exact"}],"termid":"GO:0047859"}


id: GO:0042844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycol, a diol in which the two hydroxy groups are on different carbon atoms, usually but not necessarily adjacent.","definition_xrefs":["PMID:9851711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycol metabolic process","synonyms":[{"name":"dihydric alcohol metabolic process","type":"broad"},{"name":"dihydric alcohol metabolism","type":"broad"},{"name":"glycol metabolism","type":"exact"}],"termid":"GO:0042844"}


id: MONDO:0015581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bile acid synthesis defect with cholestasis and malabsorption (obsolete MONDO:0015581)","secondary_identifiers":["icd11.foundation:1295299670","Orphanet:163631"],"termid":"MONDO:0015581","xrefs":{"Monarch":{"xref_id":"0015581"}}}


id: GO:0006912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete phagosome formation (obsolete GO:0006912)","synonyms":[{"name":"phagosome formation","type":"exact"}],"termid":"GO:0006912"}


id: GO:0033914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of successive xylose residues from the non-reducing termini of (1->3)-beta-D-xylans.","definition_xrefs":["EC:3.2.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"xylan 1,3-beta-xylosidase activity","secondary_identifiers":["MetaCyc:3.2.1.72-RXN"],"synonyms":[{"name":"1,3-beta-D-xylan xylohydrolase activity","type":"related"},{"name":"1,3-beta-D-xylosidase, exo-1,3-beta-xylosidase activity","type":"related"},{"name":"beta-1,3'-xylanase activity","type":"related"},{"name":"exo-1,3-beta-xylosidase activity","type":"related"},{"name":"exo-beta-1,3'-xylanase activity","type":"related"}],"termid":"GO:0033914"}


id: GO:0004623
data:
  {"annotated_genes":["SJAG_04323","SJAG_03204","SJAG_02091","SJAG_02093"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72839,78188,79169,80343],"is_not":false,"summary":null,"term":"GO:0004623"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phospholipid + H2O = 1-acyl-sn-glycero-3-phospholipid + a fatty acid. This reaction removes the fatty acid attached to the sn2-position. Substrates include phosphatidylcholine, phosphatidylethanolamine, choline plasmalogen and phosphatides.","definition_xrefs":["RHEA:15801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02091":null,"SJAG_02093":null,"SJAG_03204":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phospholipase A2 activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1482907","MetaCyc:RXN-15067","Reactome:R-HSA-1482776","GO:0102567","Reactome:R-HSA-1602398","Reactome:R-HSA-1602446","Reactome:R-HSA-1482900","GO:0102568","Reactome:R-HSA-1482759","MetaCyc:PHOSPHOLIPASE-A2-RXN","Reactome:R-HSA-1482868","Reactome:R-HSA-1482816","Reactome:R-HSA-1602368","Reactome:R-HSA-1482778","Reactome:R-HSA-1482897","Reactome:R-HSA-1482771","Reactome:R-HSA-1482745","Reactome:R-HSA-1482825","Reactome:R-HSA-1602399","Reactome:R-HSA-1482604","EC:3.1.1.4","Reactome:R-HSA-1482856","Reactome:R-HSA-1482884","Reactome:R-HSA-1602374","Reactome:R-HSA-1482679","Reactome:R-HSA-8848484","Reactome:R-HSA-1602377","Reactome:R-HSA-1482656","Reactome:R-HSA-1602417","Reactome:R-HSA-1482887"],"synonyms":[{"name":"cytosolic phospholipase A2 activity","type":"narrow"},{"name":"lecithinase A activity","type":"related"},{"name":"phosphatidase activity","type":"related"},{"name":"phosphatidolipase activity","type":"related"},{"name":"phosphatidylcholine 2-acylhydrolase activity","type":"related"},{"name":"phospholipase A2 activity (consuming 1,2-dipalmitoylphosphatidylcholine)","type":"narrow"},{"name":"phospholipase A2 activity consuming 1,2-dioleoylphosphatidylethanolamine)","type":"narrow"},{"name":"secreted phospholipase A2 activity","type":"narrow"}],"termid":"GO:0004623","terms_by_termid":{"GO:0004623":null}}


id: GO:0071449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid hydroperoxide stimulus. Lipid hydroperoxide is the highly reactive primary oxygenated products of polyunsaturated fatty acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid hydroperoxide","termid":"GO:0006982"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to hydroperoxide","termid":"GO:0071447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipid hydroperoxide","synonyms":[{"name":"cellular response to LHPO","type":"exact"}],"termid":"GO:0071449"}


id: FYPO:0004241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA replication is decreased during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of DNA replication during vegetative growth","termid":"FYPO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000293","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of DNA replication during cellular response to DNA damage","synonyms":[{"name":"decreased rate of DNA replication during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased rate of DNA replication during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"decreased rate of DNA replication in response to DNA damage","type":"related"},{"name":"reduced rate of DNA replication during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0004241"}


id: PBO:0111788
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain","termid":"PBO:0111788"}


id: GO:2000441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of toll-like receptor 15 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 15 signaling pathway","termid":"GO:2000440"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 15 signaling pathway","termid":"GO:0035681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 15 signaling pathway","synonyms":[{"name":"negative regulation of TLR15 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 15 signalling pathway","type":"exact"}],"termid":"GO:2000441"}


id: PBO:0083289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; null mutant exhibits synthetic phenotype with alpha-synuclein","termid":"PBO:0083289"}


id: GO:1901715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-aminobutyric acid catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"gamma-aminobutyric acid catabolic process","termid":"GO:0009450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"regulation of gamma-aminobutyric acid catabolic process","synonyms":[{"name":"regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"regulation of GABA catabolic process","type":"exact"},{"name":"regulation of GABA catabolism","type":"exact"},{"name":"regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"regulation of gamma-aminobutyric acid degradation","type":"exact"}],"termid":"GO:1901715"}


id: FYPO:0005792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T, when the cell undergoes transition from G0 phase to G2. Cell length is normal.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped cell during recovery from quiescence","termid":"FYPO:0005810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0005568","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"T-shaped cell during G0 to G2 transition","synonyms":[{"name":"T-shaped cell during cell cycle re-entry at G2","type":"exact"},{"name":"T-shaped cell during cell quiescence to G2 transition","type":"exact"},{"name":"T-shaped cell during exit from cell quiescence into G2","type":"exact"},{"name":"T-shaped cell during quiescence to G2 transition","type":"exact"},{"name":"T-shaped cell during recovery from quiescence following G2 arrest","type":"exact"},{"name":"T-shaped cell during recovery from quiescence into G2","type":"exact"},{"name":"cell morphology, T shaped during G0 to G2 transition","type":"exact"}],"termid":"FYPO:0005792"}


id: PBO:0081692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 614","termid":"PBO:0081692"}


id: PR:Q9P6K7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- asc1 gene.","definition_xrefs":["UniProtKB:Q9P6K7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-aminoacylation cofactor arc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30C2.04","synonyms":[{"name":"Spom972h-asc1","type":"exact"}],"termid":"PR:Q9P6K7"}


id: MONDO:0008564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital anomaly characterized by immunodeficiency, abnormal facies, congenital heart disease, hypocalcemia, and increased susceptibility to infections. Pathologic characteristics include conotruncal abnormalities and absence or hypoplasia of thymus and parathyroid glands. DiGeorge syndrome is associated with abnormalities of chromosome 22. Also known as DiGeorge anomaly.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital T-cell immunodeficiency","termid":"MONDO:0001222"},{"relation_name":"is_a","term_name":"22q11.2 deletion syndrome","termid":"MONDO:0018923"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005046","MONDO:0002320"],"is_obsolete":false,"name":"DiGeorge syndrome","secondary_identifiers":["ICD9:279.11","MEDGEN:4297","UMLS:C0012236","DOID:11198","OMIM:188400","NANDO:1200688","MESH:D004062","SCTID:77128003","GTR:AN1145678","NANDO:1200339","NANDO:2200712","GARD:15118","NCIT:C2989"],"synonyms":[{"name":"22q deletion syndrome(s)","type":"exact"},{"name":"22q11.2 Deletion syndrome","type":"exact"},{"name":"Catch22","type":"related"},{"name":"DGS","type":"exact"},{"name":"DGS1","type":"exact"},{"name":"Di-George syndrome","type":"exact"},{"name":"DiGeorge anomaly","type":"exact"},{"name":"DiGeorge syndrome","type":"exact"},{"name":"DiGeorge syndrome chromosome region","type":"related"},{"name":"DiGeorge syndrome type 1","type":"exact"},{"name":"DiGeorge's syndrome","type":"exact"},{"name":"Shprintzen syndrome","type":"narrow"},{"name":"Sphrintzen","type":"narrow"},{"name":"Takao VCF syndrome","type":"related"},{"name":"VCF","type":"related"},{"name":"chromosome 22Q11.2 deletion syndrome","type":"related"},{"name":"hypoplasia of thymus and parathyroids","type":"related"},{"name":"pharyngeal pouch syndrome","type":"exact"},{"name":"third and fourth pharyngeal pouch syndrome","type":"related"},{"name":"velo-cardio-facial syndrome","type":"related"},{"name":"velocardiofacial syndrome","type":"related"}],"termid":"MONDO:0008564","xrefs":{"Monarch":{"xref_id":"0008564"}}}


id: PBO:0087135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein required for the assembly of box H/ACA snoRNPs; thus required for pre-rRNA processing; forms a complex with Shq1p and interacts with H/ACA snoRNP components Nhp2p and Cbf5p; similar to Gar1p","termid":"PBO:0087135"}


id: MONDO:0009349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most severe form of holoprosencephaly in which there is a complete absence of midline forebrain division resulting in the presence of fused hemispheres and a single ventricle (alobar holoprosencephaly). It is mapped to chromosome 21q22.","definition_xrefs":["NCIT:C75476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 1","secondary_identifiers":["UMLS:C0266667","DOID:0110881","OMIM:236100","MEDGEN:78617"],"synonyms":[{"name":"Demyer sequence","type":"related"},{"name":"HPE1","type":"exact"},{"name":"Hpe, familial","type":"broad"},{"name":"arhinencephaly","type":"related"},{"name":"cyclopia","type":"broad"},{"name":"holoprosencephaly 1","type":"exact"},{"name":"holoprosencephaly 1, isolated cases","type":"exact"},{"name":"holoprosencephaly type 1","type":"exact"},{"name":"holoprosencephaly, familial Alobar","type":"related"},{"name":"isolated arhinencephaly","type":"related"}],"termid":"MONDO:0009349","xrefs":{"Monarch":{"xref_id":"0009349"}}}


id: PBO:0113078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin for the Sgv1p (Bur1p) protein kinase; subunit of the CDK-cyclin BUR kinase complex with Sgv1p (Bur1p); regulates Set2p-dependent H3K36 trimethylation; regulates transcriptional elongation through the phosphorylation of the carboxy-terminal domain (CTD) of Rpo21p; involved in the recruitment of Spt6p to the CTD at the onset of transcription; regulates telomere elongation","termid":"PBO:0113078"}


id: GO:0031275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the assembly of pseudopodia from the lateral side of the cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lateral pseudopodium assembly (obsolete GO:0031275)","synonyms":[{"name":"regulation of lateral pseudopodium formation","type":"exact"}],"termid":"GO:0031275"}


id: PBO:0071588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 5","termid":"PBO:0071588"}


id: PBO:0051452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-45","termid":"PBO:0051452"}


id: PBO:0051022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 2","termid":"PBO:0051022"}


id: GO:0048198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cytosolic coat proteins fit together in a basketlike convex framework to form a coated deformed region on the cytoplasmic surface of the membrane. The deformed region forms into a complete vesicle and is released.","definition_xrefs":["GOC:jid","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"Golgi vesicle budding","termid":"GO:0048194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"Golgi vesicle bud deformation and release","synonyms":[{"name":"Golgi-derived vesicle bud deformation and release","type":"exact"},{"name":"dictyosome vesicle bud deformation","type":"narrow"}],"termid":"GO:0048198"}


id: PBO:0088859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3-containing 90S preribosome complex subunit Cms1","termid":"PBO:0088859"}


id: PR:O94462
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein puf3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.22c","synonyms":[{"name":"Spom972h-puf3","type":"exact"},{"name":"pumilio homology domain family member 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94462"}


id: PBO:0114488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial aldehyde dehydrogenase; required for growth on ethanol and conversion of acetaldehyde to acetate; phosphorylated; activity is K+ dependent; utilizes NADP+ or NAD+ equally as coenzymes; expression is glucose repressed; can substitute for cytosolic NADP-dependent aldehyde dehydrogenase when directed to the cytosol; polymerizes into filaments in meiotic cells; human homolog ALDH2 can complement yeast ald4 mutant","termid":"PBO:0114488"}


id: FYPO:0003525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the addition of actin monomers to a filament occurs to a greater extent than normal at one or both cell tips.","definition_xrefs":["PMID:24954052","PomBase:mah","GO:0030041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization at cell tip","termid":"FYPO:0003524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased actin filament polymerization at cell tip","synonyms":[{"name":"increased actin filament polymerisation at cell tip","type":"exact"},{"name":"increased actin filament polymerization at cell end","type":"exact"},{"name":"increased actin filament polymerization at cell tip during mitotic cell cycle","type":"related"},{"name":"increased actin filament polymerization at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003525"}


id: PBO:0082197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoicase; converts allantoate to urea and ureidoglycolate in the second step of allantoin degradation; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0082197"}


id: MONDO:0018372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete osteonecrosis (obsolete MONDO:0018372)","termid":"MONDO:0018372","xrefs":{"Monarch":{"xref_id":"0018372"}}}


id: GO:0019614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound catabolic process","synonyms":[{"name":"catechol breakdown","type":"related"},{"name":"catechol catabolic process","type":"related"},{"name":"catechol catabolism","type":"related"},{"name":"catechol degradation","type":"related"}],"termid":"GO:0019614"}


id: PBO:0030127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_molybdenum_level","termid":"PBO:0030127"}


id: PR:O14301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00809","PANTHER:PTHR19856:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C9G1.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.05","secondary_identifiers":["UniProtKB:O14301"],"synonyms":[{"name":"Spom972h-WDR1","type":"exact"}],"termid":"PR:O14301"}


id: GO:0015049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methane + NAD(P)H + H+ + O2 = methanol + NAD(P)+ + H2O.","definition_xrefs":["PMID:10896210","EC:1.14.13.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methane monooxygenase [NAD(P)H] activity","secondary_identifiers":["UM-BBD_enzymeID:r0237","MetaCyc:METHANE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"methane hydroxylase activity","type":"related"},{"name":"methane,NAD(P)H:oxygen oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0015049"}


id: PBO:0064528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit GL","termid":"PBO:0064528"}


id: GO:0009106
data:
  {"annotated_genes":["SJAG_03553","SJAG_01271","SJAG_03198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99036,99738,76780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01271":null,"SJAG_03198":null,"SJAG_03553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"lipoate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000273"],"synonyms":[{"name":"lipoate metabolism","type":"exact"},{"name":"lipoic acid metabolic process","type":"exact"},{"name":"lipoic acid metabolism","type":"exact"}],"termid":"GO:0009106","terms_by_termid":{"GO:0009107":null}}


id: FYPO:0001481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity does not increase as a result of a nutrient stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"},{"relation_name":"is_a","term_name":"abnormal cellular response to nutrient","termid":"FYPO:0001484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000661","FYPO:0001320","FYPO:0000652","FYPO:0000707","FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"alpha,alpha-trehalase activity increase abolished during cellular response to nutrient","synonyms":[{"name":"absent increase in trehalase activity following nutrient stimulus","type":"exact"},{"name":"neutral trehalase activity increase abolished during cellular response to nutrient","type":"exact"},{"name":"trehalase activity increase abolished during cellular response to nutrient","type":"broad"}],"termid":"FYPO:0001481"}


id: PBO:0069874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1161, pseudogene","termid":"PBO:0069874"}


id: GO:0036193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-2H-1,4-benzoxazin-3(4H)-one + O2 + reduced [NADPH--hemoprotein reductase] = DIBOA + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-1,4-benzoxazin-3-one monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R07423","EC:1.14.14.110"],"termid":"GO:0036193"}


id: MONDO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease of orbital part of eye adnexa","termid":"MONDO:0004751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermittent proptosis","secondary_identifiers":["MEDGEN:509886","ICD9:376.34","DOID:12363","SCTID:49774006","UMLS:C0155270"],"synonyms":[{"name":"intermittent exophthalmos","type":"exact"}],"termid":"MONDO:0001512","xrefs":{"Monarch":{"xref_id":"0001512"}}}


id: MONDO:0958239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia/coloboma 11","secondary_identifiers":["OMIM:620731","UMLS:C5935584","MEDGEN:1856733"],"termid":"MONDO:0958239","xrefs":{"Monarch":{"xref_id":"0958239"}}}


id: GO:0045925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the receptiveness of a female to male advances.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female receptivity","termid":"GO:0045924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female receptivity","synonyms":[{"name":"activation of female receptivity","type":"narrow"},{"name":"stimulation of female receptivity","type":"narrow"},{"name":"up regulation of female receptivity","type":"exact"},{"name":"up-regulation of female receptivity","type":"exact"},{"name":"upregulation of female receptivity","type":"exact"}],"termid":"GO:0045925"}


id: PBO:0070578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 44","termid":"PBO:0070578"}


id: PBO:0076579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 7","termid":"PBO:0076579"}


id: GO:2000112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellular macromolecule biosynthetic process.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular macromolecule biosynthetic process (obsolete GO:2000112)","synonyms":[{"name":"regulation of cellular biopolymer biosynthetic process","type":"exact"},{"name":"regulation of cellular macromolecule anabolism","type":"exact"},{"name":"regulation of cellular macromolecule biosynthesis","type":"exact"},{"name":"regulation of cellular macromolecule formation","type":"exact"},{"name":"regulation of cellular macromolecule synthesis","type":"exact"}],"termid":"GO:2000112"}


id: PBO:0087442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit h of the F0 sector of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; protein abundance increases in response to DNA replication stress","termid":"PBO:0087442"}


id: GO:0033437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"ACU codon-amino acid adaptor activity","synonyms":[{"name":"ACT codon-amino acid adaptor activity","type":"exact"},{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033437"}


id: GO:0070889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a platelet alpha granule. A platelet alpha granule is a secretory organelle found in blood platelets.","definition_xrefs":["GOC:rph","PMID:16123220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet alpha granule organization","synonyms":[{"name":"platelet alpha granule organisation","type":"exact"},{"name":"platelet alpha granule organization and biogenesis","type":"related"},{"name":"platelet alpha-granule organization","type":"exact"}],"termid":"GO:0070889"}


id: GO:0009687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"apocarotenoid metabolic process","termid":"GO:0043288"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"abscisic acid metabolic process","synonyms":[{"name":"abscisic acid metabolism","type":"exact"}],"termid":"GO:0009687"}


id: PBO:0030700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hydrogen_peroxide","termid":"PBO:0030700"}


id: PBO:0086313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with roles in exocytosis and cation homeostasis; functions in docking and fusion of post-Golgi vesicles with plasma membrane; regulates cell proliferation and colony development via the Rho1-Tor1 pathway; interacts with SNARE protein Sec9p; homolog of Drosophila lethal giant larvae tumor suppressor; SRO77 has a paralog, SRO7, that arose from the whole genome duplication","termid":"PBO:0086313"}


id: PBO:0087549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauA globular domain of TFIIIC that binds DNA at the BoxA promoter sites of tRNA and similar genes; human homolog is TFIIIC-63","termid":"PBO:0087549"}


id: GO:0060755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mast cell chemotaxis. Mast cell chemotaxis is the movement of a mast cell in response to an external stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"regulation of mast cell chemotaxis","termid":"GO:0060753"},{"relation_name":"negatively_regulates","term_name":"mast cell chemotaxis","termid":"GO:0002551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell chemotaxis","termid":"GO:0060755"}


id: PR:Q10143
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00236","PANTHER:PTHR12409:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.07c","secondary_identifiers":["UniProtKB:Q10143"],"synonyms":[{"name":"Spom972h-VBP1","type":"exact"}],"termid":"PR:Q10143"}


id: MONDO:0800484
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[88051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009867"},{"annotations":[87840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008685"}]},"cv_name":"mondo","definition":"A metabolic heart condition characterized by variable cardiac hypertrophy, ventricular pre-excitation, and aberrant glycogen storage in the cardiac tissue due to a pathogenic variant in PRKAG2 that results in a net anabolic effect in cardiac cells.","definition_xrefs":["PMID:29298659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"PRKAG2-related cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PRKAG2 cardiac syndrome","type":"exact"},{"name":"PRKAG2 cardiomyopathy","type":"exact"},{"name":"PRKAG2 syndrome","type":"exact"},{"name":"PRKAG2-related cardiomyopathy","type":"exact"}],"termid":"MONDO:0800484","terms_by_termid":{"MONDO:0008685":null,"MONDO:0009867":null,"MONDO:0010946":null},"xrefs":{"Monarch":{"xref_id":"0800484"}}}


id: GO:1901179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of spheroidene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"spheroidene metabolic process","termid":"GO:1901178"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"spheroidene catabolic process","synonyms":[{"name":"spheroidene breakdown","type":"exact"},{"name":"spheroidene catabolism","type":"exact"},{"name":"spheroidene degradation","type":"exact"}],"termid":"GO:1901179"}


id: PBO:0063123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 8","termid":"PBO:0063123"}


id: PR:Q9UTE1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC222.13c gene.","definition_xrefs":["UniProtKB:Q9UTE1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase C222.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.13c","synonyms":[{"name":"Spom972h-SPAC222.13c","type":"exact"}],"termid":"PR:Q9UTE1"}


id: PR:Q01682
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pho4 gene.","definition_xrefs":["UniProtKB:Q01682","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-repressible acid phosphatase pho4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.03c","synonyms":[{"name":"Spom972h-pho4","type":"exact"}],"termid":"PR:Q01682"}


id: PBO:0001342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin capping protein beta subunit (predicted)","termid":"PBO:0001342"}


id: PBO:0079955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP6NL antisense RNA 1","termid":"PBO:0079955"}


id: PBO:0090535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase complex catalytic subunit Naa30","termid":"PBO:0090535"}


id: GO:0050026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-glycol + NAD(P)+ = a 2-hydroxycarbonyl compound + NAD(P)H + H+.","definition_xrefs":["MetaCyc:L-GLYCOL-DEHYDROGENASE-RXN","EC:1.1.1.185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-glycol dehydrogenase activity","synonyms":[{"name":"L-(+)-glycol:NAD(P) oxidoreductase activity","type":"related"},{"name":"L-glycol:NAD(P) dehydrogenase activity","type":"related"},{"name":"L-glycol:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"glycol (nicotinamide adenine dinucleotide (phosphate)) dehydrogenase activity","type":"related"}],"termid":"GO:0050026"}


id: PBO:0031826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_modification","termid":"PBO:0031826"}


id: FYPO:0009006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell enters the meiotic cell cycle without either of the normal steps that precede it: conjugation with cellular fusion and karyogamy with nuclear fusion.","definition_xrefs":["PMID:36650056","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}


id: GO:0006094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.","definition_xrefs":["MetaCyc:GLUCONEO-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"gluconeogenesis","secondary_identifiers":["Reactome:R-HSA-70263","Wikipedia:Gluconeogenesis"],"synonyms":[{"name":"glucose biosynthesis","type":"exact"},{"name":"glucose biosynthetic process","type":"exact"}],"termid":"GO:0006094"}


id: PBO:0087771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing 90S preribosome and SSU processome complexes; involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma; Small Subunit processome is also known as SSU processome","termid":"PBO:0087771"}


id: MONDO:0013608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the TCTN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 13","secondary_identifiers":["GARD:15765","OMIM:614173","MEDGEN:481661","DOID:0110982","UMLS:C3280031"],"synonyms":[{"name":"JBTS13","type":"exact"},{"name":"Joubert syndrome 13","type":"exact"},{"name":"Joubert syndrome caused by mutation in TCTN1","type":"exact"},{"name":"Joubert syndrome type 13","type":"exact"},{"name":"TCTN1 Joubert syndrome","type":"exact"}],"termid":"MONDO:0013608","xrefs":{"Monarch":{"xref_id":"0013608"}}}


id: MONDO:0001640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An spondylitis caused by infection with Neisseria gonorrhoeae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylitis","termid":"MONDO:0003937"},{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal spondylitis","secondary_identifiers":["ICD9:098.53","DOID:13127","SCTID:53664003","UMLS:C0153219","MEDGEN:509212","icd11.foundation:1439203351"],"termid":"MONDO:0001640","xrefs":{"Monarch":{"xref_id":"0001640"}}}


id: PBO:0047171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 4","termid":"PBO:0047171"}


id: PBO:0087348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphingolipid alpha-hydroxylase; functions in the alpha-hydroxylation of sphingolipid-associated very long chain fatty acids, has both cytochrome b5-like and hydroxylase/desaturase domains, not essential for growth","termid":"PBO:0087348"}


id: GO:0019910
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mitochondrial complex of a regulatory and catalytic subunit that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. An example of this component is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","PMID:9395502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045253"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0019910"}


id: PBO:0017616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med6","termid":"PBO:0017616"}


id: PBO:0089471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-bS1m","termid":"PBO:0089471"}


id: GO:0051761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sesquiterpenes, any of a class of terpenes of the formula C15H24 or a derivative of such a terpene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sesquiterpene metabolic process","synonyms":[{"name":"sesquiterpene metabolism","type":"exact"}],"termid":"GO:0051761"}


id: PATO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant","termid":"PATO:0001227"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability","synonyms":[{"name":"low variability","type":"exact"}],"termid":"PATO:0001583"}


id: MONDO:0800119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An irreversible obstructive lung disease characterized by subepithelial inflammation and fibrotic narrowing of the bronchioles after lower respiratory tract infection during childhood, especially early childhood. Although diagnosis of PIBO should be confirmed by histopathology, it is generally based on history and clinical findings. Irreversible airway obstruction is demonstrated by decreased forced expiratory volume in 1 second with an absent bronchodilator response, and by mosaic perfusion, air trapping, and/or bronchiectasis on computed tomography images. However, lung function tests using spirometry are not feasible in young children, and most cases of PIBO develop during early childhood.","definition_xrefs":["PMID:26770220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiolitis","termid":"MONDO:0002465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postinfectious bronchiolitis obliterans","secondary_identifiers":["MEDGEN:1840786","UMLS:C5830150"],"synonyms":[{"name":"PIBO","type":"exact"}],"termid":"MONDO:0800119","xrefs":{"Monarch":{"xref_id":"0800119"}}}


id: PBO:0076506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 6 pseudogene","termid":"PBO:0076506"}


id: GO:0000828
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052723"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + diphospho-1D-myo-inositol-pentakisphosphate. The isomeric configuration of diphospho-1D-myo-inositol-pentakisphosphate (PP-IP5) is unknown.","definition_xrefs":["GOC:elh","GOC:vw","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate kinase activity","references_by_uniquename":{"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-1855227","Reactome:R-HSA-1855216","Reactome:R-HSA-1855207"],"synonyms":[{"name":"IP6 kinase","type":"exact"}],"termid":"GO:0000828","terms_by_termid":{"GO:0052723":null}}


id: GO:0033142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear progesterone receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"nuclear progesterone receptor binding","synonyms":[{"name":"progesterone receptor binding","type":"broad"}],"termid":"GO:0033142"}


id: PBO:0077706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin I3, cardiac type","termid":"PBO:0077706"}


id: PBO:0068335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 43","termid":"PBO:0068335"}


id: SO:0002181
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a ribozyme.","direct_ancestors":[{"relation_name":"is_a","term_name":"enzymatic_RNA_gene","termid":"SO:0002180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribozyme_gene","synonyms":[{"name":"ribozyme gene","type":"exact"}],"termid":"SO:0002181"}


id: MONDO:0008874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bangstad syndrome is a rare endocrine disease characterized by the association of primordial birdheaded nanism, progressive ataxia, goiter, primary gonadal insufficiency and insulin resistant diabetes mellitus. Plasma concentrations of TSH, PTH, LH, FSH, ACTH, glucagon, and insulin are usually elevated. A generalized cell membrane defect was suggested to be the pathophysiological abnormality in these patients. The mode of inheritance was thought to be autosomal recessive. There have been no further descriptions in the literature since 1989.","definition_xrefs":["Orphanet:1227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bangstad syndrome","secondary_identifiers":["ICD9:759.89","UMLS:C0342284","MEDGEN:90978","SCTID:237614004","MESH:C537902","OMIM:210740","GARD:812"],"synonyms":[{"name":"Bangstad syndrome","type":"exact"},{"name":"Bird-headed dwarfism with progressive ataxia, insulin-resistant diabetes, goiter and primary gonadal insufficiency","type":"related"},{"name":"Bird-headed dwarfism with progressive ataxia, insulin-resistant diabetes, goiter, and primary gonadal insufficiency","type":"related"},{"name":"Bird-headed dwarfism with progressive ataxia, insulin-resistant diabetes, goitre and primary gonadal insufficiency","type":"related"},{"name":"ataxia-diabetes-goiter-gonadal insufficiency syndrome","type":"exact"}],"termid":"MONDO:0008874","xrefs":{"Monarch":{"xref_id":"0008874"}}}


id: MONDO:0013656
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87650],"is_not":false,"summary":null,"term":"MONDO:0013656"}]},"cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the KIF1A gene, encoding kinesin-like protein KIF1A. It is characterized by microcephaly, intellectual disability, and delayed psychomotor development. The condition is progressive, occurs in early infancy, and is of variable severity.","definition_xrefs":["NCIT:C133742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"},{"relation_name":"is_a","term_name":"KIF1A related neurological disorder","termid":"MONDO:0700055"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5393830","DOID:0070039","GARD:16459","MEDGEN:1714250","OMIM:614255","Orphanet:662367"],"synonyms":[{"name":"KIF1A autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD9","type":"exact"},{"name":"NESCAV syndrome","type":"exact"},{"name":"autosomal dominant intellectual disability 9","type":"exact"},{"name":"autosomal dominant mental retardation 9","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 9","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in KIF1A","type":"exact"},{"name":"intellectual disability, autosomal dominant 9","type":"exact"},{"name":"intellectual disability, autosomal dominant type 9","type":"exact"},{"name":"mental retardation, autosomal dominant 9","type":"related"},{"name":"mental retardation, autosomal dominant type 9","type":"exact"}],"termid":"MONDO:0013656","terms_by_termid":{"MONDO:0013656":null},"xrefs":{"Monarch":{"xref_id":"0013656"}}}


id: PBO:0054634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2039","termid":"PBO:0054634"}


id: GO:1904711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Wnt-Frizzled-LRP5/6 complex assembly.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"Wnt-Frizzled-LRP5/6 complex assembly","termid":"GO:1904701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of Wnt-Frizzled-LRP5/6 complex assembly","synonyms":[{"name":"regulation of Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"regulation of Wnt receptor complex assembly","type":"broad"},{"name":"regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"}],"termid":"GO:1904711"}


id: PBO:0078902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 11-1","termid":"PBO:0078902"}


id: MONDO:0014937
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88982],"is_not":false,"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye carcinoma","termid":"MONDO:0002466"},{"relation_name":"is_a","term_name":"iris cancer","termid":"MONDO:0002658"},{"relation_name":"is_a","term_name":"hereditary renal cell carcinoma","termid":"MONDO:0003008"},{"relation_name":"is_a","term_name":"isolated aniridia","termid":"MONDO:0007119"},{"relation_name":"is_a","term_name":"SMARCB1-deficient kidney medullary carcinoma","termid":"MONDO:0100534"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"aniridia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536372","GARD:16200","SCTID:253232000","UMLS:C0344543","OMIM:617141","MEDGEN:138010"],"synonyms":[{"name":"AN2","type":"exact"},{"name":"aniridia 2","type":"exact"},{"name":"aniridia type 2","type":"exact"}],"termid":"MONDO:0014937","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0014937"}}}


id: PBO:0049812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC4 antisense RNA 1","termid":"PBO:0049812"}


id: MONDO:0004809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cannabis abuse (obsolete MONDO:0004809)","termid":"MONDO:0004809","xrefs":{"Monarch":{"xref_id":"0004809"}}}


id: PBO:0067941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 243","termid":"PBO:0067941"}


id: MONDO:0008205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated patella aplasia-hypoplasia is an extremely rare genetic condition characterized by congenital absence or marked reduction of the patellar bone described in only a few families to date.","definition_xrefs":["Orphanet:86789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"patella aplasia/hypoplasia","secondary_identifiers":["MEDGEN:358246","OMIM:168860","GARD:8709","icd11.foundation:88577362","MESH:C535568","UMLS:C1868577"],"synonyms":[{"name":"PTLAH","type":"exact"},{"name":"absent patella","type":"related"},{"name":"familial absence of the patella","type":"related"},{"name":"familial aplasia of the patella (subtype)","type":"related"},{"name":"patella aplasia or hypoplasia","type":"exact"},{"name":"patella aplasia-hypoplasia","type":"related"}],"termid":"MONDO:0008205","xrefs":{"Monarch":{"xref_id":"0008205"}}}


id: GO:0015061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete red-sensitive opsin (obsolete GO:0015061)","synonyms":[{"name":"red-sensitive opsin","type":"exact"}],"termid":"GO:0015061"}


id: PBO:0066430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RERG antisense RNA 1","termid":"PBO:0066430"}


id: GO:0007026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule polymerization or depolymerization","termid":"GO:0031111"},{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"is_a","term_name":"negative regulation of protein depolymerization","termid":"GO:1901880"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"negative regulation of microtubule depolymerization","synonyms":[{"name":"down regulation of microtubule depolymerization","type":"exact"},{"name":"down-regulation of microtubule depolymerization","type":"exact"},{"name":"downregulation of microtubule depolymerization","type":"exact"},{"name":"inhibition of microtubule depolymerization","type":"narrow"},{"name":"microtubule rescue","type":"narrow"},{"name":"microtubule stabilization","type":"exact"},{"name":"negative regulation of microtubule catastrophe","type":"narrow"},{"name":"negative regulation of microtubule disassembly","type":"exact"}],"termid":"GO:0007026"}


id: PBO:0029882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_silent_mating-type_cassette","termid":"PBO:0029882"}


id: PBO:0051767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IPO9 antisense RNA 1","termid":"PBO:0051767"}


id: GO:2000210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anoikis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of anoikis","termid":"GO:2000209"},{"relation_name":"positively_regulates","term_name":"anoikis","termid":"GO:0043276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anoikis","synonyms":[{"name":"positive regulation of detachment induced cell death","type":"exact"},{"name":"positive regulation of suspension induced apoptosis","type":"exact"}],"termid":"GO:2000210"}


id: GO:0035025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Rho protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rho protein signal transduction","termid":"GO:0035023"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Rho protein signal transduction","synonyms":[{"name":"activation of Rho protein signal transduction","type":"narrow"},{"name":"stimulation of Rho protein signal transduction","type":"narrow"},{"name":"up regulation of Rho protein signal transduction","type":"exact"},{"name":"up-regulation of Rho protein signal transduction","type":"exact"},{"name":"upregulation of Rho protein signal transduction","type":"exact"}],"termid":"GO:0035025"}


id: PBO:0084551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric region; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme","termid":"PBO:0084551"}


id: GO:0000906
data:
  {"annotated_genes":["SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80495],"is_not":false,"summary":null,"term":"GO:0000906"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-2-butanone-4-phosphate + 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione = 6,7-dimethyl-8-ribityllumazine + phosphate.","definition_xrefs":["PMID:7559556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"6,7-dimethyl-8-ribityllumazine synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:LUMAZINESYN-RXN","RHEA:26152","EC:2.5.1.78"],"synonyms":[{"name":"lumazine synthase activity","type":"broad"}],"termid":"GO:0000906","terms_by_termid":{"GO:0000906":null}}


id: PBO:0086353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pumilio-homology domain protein; binds the 3' UTR of ASH1 mRNA and represses its translation, resulting in proper asymmetric localization of ASH1 mRNA; required at post-transcriptional step for efficient retrotransposition; absence results in decreased Ty1 Gag:GFP protein levels; co-sediments with the 60S ribosomal subunit and is required for its biogenesis","termid":"PBO:0086353"}


id: PBO:0003692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf7","termid":"PBO:0003692"}


id: GO:0001821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a cell or tissue. It is formed by decarboxylation of histidine and it acts through receptors in smooth muscle and in secretory systems.","definition_xrefs":["ISBN:0198506732","GOC:mah","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"is_a","term_name":"histamine transport","termid":"GO:0051608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"histamine secretion","termid":"GO:0001821"}


id: GO:0098864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont organism that stabilizes the its host tight cell-cell junctions, making them less dynamic. The tight junction is a cell-cell junction that seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other, and plays a role in the inflammatory response of the host.","definition_xrefs":["PMID:25838979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host tight cell-cell junction","termid":"GO:0098865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated stabilization of host tight cell-cell junction","synonyms":[{"name":"modification by symbiont of host tight cell-cell junction","type":"broad"},{"name":"stabilization of host tight cell-cell junction","type":"broad"}],"termid":"GO:0098864"}


id: MONDO:0044956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma that arises from the paranasal sinus. It is characterized by the presence of epidermoid cells, mucus producing cells, and cells of intermediate type.","definition_xrefs":["NCIT:C6018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paranasal sinus mucoepidermoid carcinoma","secondary_identifiers":["MEDGEN:235461","UMLS:C1335340"],"synonyms":[{"name":"accessory sinus mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of accessory sinus","type":"exact"},{"name":"mucoepidermoid carcinoma of paranasal sinus","type":"exact"},{"name":"mucoepidermoid carcinoma of the accessory sinus","type":"exact"},{"name":"mucoepidermoid carcinoma of the paranasal sinus","type":"exact"},{"name":"paranasal sinus mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0044956","xrefs":{"Monarch":{"xref_id":"0044956"}}}


id: PBO:0017433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-symbiotically_interacts_with","termid":"PBO:0017433"}


id: MONDO:0014017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with autism and macrocephaly","secondary_identifiers":["MEDGEN:767287","UMLS:C3554373","Orphanet:642675","OMIM:615032"],"synonyms":[{"name":"AUTS18","type":"related"},{"name":"CHD8 overgrowth syndrome","type":"exact"},{"name":"autism, susceptibility to, 18","type":"exact"},{"name":"autism, susceptibility to, type 18","type":"exact"},{"name":"susceptibility to autism 18","type":"related"}],"termid":"MONDO:0014017","xrefs":{"Monarch":{"xref_id":"0014017"}}}


id: MONDO:0012103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 25 (SCA25) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by cerebellar ataxia and prominent sensory neuropathy.","definition_xrefs":["Orphanet:101111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 25","secondary_identifiers":["GARD:9996","icd11.foundation:8347192","UMLS:C1837518","SCTID:718770005","DOID:0050974","MEDGEN:373347","MESH:C537202","OMIM:608703"],"synonyms":[{"name":"SCA25","type":"exact"},{"name":"spinocerebellar ataxia 25","type":"related"}],"termid":"MONDO:0012103","xrefs":{"Monarch":{"xref_id":"0012103"}}}


id: PBO:0046323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1 pseudogene 4","termid":"PBO:0046323"}


id: MONDO:0017300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pericardium anomaly comprises a group of rare congenital cardiac malformations characterized by the complete (Congenital complete agenesis of pericardium) or partial absence of the pericardium (Congenital partial agenesis of pericardium), or by the presence of pericardial cysts (Pleuropericardial cyst).","definition_xrefs":["Orphanet:2846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pericardium anomaly","secondary_identifiers":["GARD:18779","MEDGEN:672640","SCTID:93018000","UMLS:C0685699","icd11.foundation:1188459532","ICD9:746.89"],"termid":"MONDO:0017300","xrefs":{"Monarch":{"xref_id":"0017300"}}}


id: PBO:0027502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_MTT","termid":"PBO:0027502"}


id: PBO:0077038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 6","termid":"PBO:0077038"}


id: PBO:0036151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_G4_motif_during_vegetative_growth","termid":"PBO:0036151"}


id: MONDO:0010681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelolymphatic insufficiency","secondary_identifiers":["MEDGEN:333371","OMIM:310350","UMLS:C1839650"],"synonyms":[{"name":"Myelolymphatic insufficiency","type":"exact"},{"name":"Pelger-like anomaly with leukopenia and susceptibility to infections","type":"related"}],"termid":"MONDO:0010681","xrefs":{"Monarch":{"xref_id":"0010681"}}}


id: PBO:0065723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWP2 small subunit processome component","termid":"PBO:0065723"}


id: GO:0052592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.17.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0052592"}


id: PBO:0061727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 1","termid":"PBO:0061727"}


id: GO:0043279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alkaloid","termid":"GO:0043279"}


id: PBO:0052521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 34","termid":"PBO:0052521"}


id: MONDO:0700265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraneoplastic syndrome that involves the joints, bones, muscles, and/or connective tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic rheumatic syndrome","termid":"MONDO:0700265","xrefs":{"Monarch":{"xref_id":"0700265"}}}


id: PBO:0078589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 2, Y-linked","termid":"PBO:0078589"}


id: MONDO:0014219
data:
  {"annotated_genes":["SJAG_00890"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87610],"is_not":false,"summary":null,"term":"MONDO:0014219"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"alacrima, achalasia, and intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112321","OMIM:615510","MEDGEN:1640947","GARD:12404","UMLS:C4706563"],"synonyms":[{"name":"AAMR","type":"related"},{"name":"GMPPA-CDG","type":"related"},{"name":"alacrima, achalasia, and intellectual disability syndrome","type":"exact"},{"name":"alacrima, achalasia, and mental retardation syndrome","type":"exact"}],"termid":"MONDO:0014219","terms_by_termid":{"MONDO:0014219":null},"xrefs":{"Monarch":{"xref_id":"0014219"}}}


id: MONDO:0013373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the PSEN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1V","secondary_identifiers":["DOID:0110427","GARD:15690","OMIM:613697","MESH:C566856","MEDGEN:462308","UMLS:C3150958"],"synonyms":[{"name":"CMD1V","type":"exact"},{"name":"PSEN2 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1V","type":"related"},{"name":"cardiomyopathy, dilated, type 1V","type":"exact"},{"name":"dilated cardiomyopathy type 1V","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in PSEN2","type":"exact"}],"termid":"MONDO:0013373","xrefs":{"Monarch":{"xref_id":"0013373"}}}


id: GO:1900753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a doxorubicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:19063901","PMID:19651502","PMID:15090538","PMID:9651400","GOC:TermGenie","PMID:12057006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"doxorubicin transport","synonyms":[{"name":"(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"exact"},{"name":"(1S,3S)-3-glycoloyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"related"},{"name":"(8S-cis)-10-((3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,8,11-trihydroxy-8-(hydroxyacetyl)-1-methoxy-5,12-naphthacenedione transport","type":"related"},{"name":"14-hydroxydaunomycin transport","type":"related"},{"name":"14-hydroxydaunorubicine transport","type":"related"},{"name":"Adriamycin transport","type":"related"},{"name":"doxorubicine transport","type":"related"},{"name":"doxorubicinum transport","type":"related"}],"termid":"GO:1900753"}


id: PBO:0061290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 2","termid":"PBO:0061290"}


id: PBO:0077160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 1 pseudogene 1","termid":"PBO:0077160"}


id: GO:0031848
data:
  {"annotated_genes":["SJAG_01777","SJAG_03092"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81649,91590],"is_not":false,"summary":null,"term":"GO:0031848"}]},"cv_name":"biological_process","definition":"A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"},{"relation_name":"part_of","term_name":"telomere capping","termid":"GO:0016233"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01777":null,"SJAG_03092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"protection from non-homologous end joining at telomere","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protection from NHEJ-mediated telomere fusion","type":"exact"}],"termid":"GO:0031848","terms_by_termid":{"GO:0031848":null}}


id: PBO:0027825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meroterically_attached_lagging_mitotic_chromosomes","termid":"PBO:0027825"}


id: PBO:0058272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-1","termid":"PBO:0058272"}


id: MONDO:0009203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Focal facial dermal dysplasia type III (FFDD3) is a rare focal facial facial dysplasia (FFDD), characterized primarily by congenital bitemporal scar-like depressions and a typical, but variable facial dysmorphism, which may include distichiasis (upper lids) or lacking eyelashes, slanted eyebrows and a flattened and/or bulbous nasal tip and other features such as a low frontal hairline, sparse hair, redundant skin, epicanthal folds, low-set dysplastic ears, blepharitis and conjunctivitis.","definition_xrefs":["Orphanet:1807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal facial dermal dysplasia","termid":"MONDO:0018363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal facial dermal dysplasia type III","secondary_identifiers":["OMIM:227260","GARD:121","UMLS:C1744559","MEDGEN:315643","SCTID:403771007"],"synonyms":[{"name":"FFDD type 2","type":"related"},{"name":"FFDD type III","type":"exact"},{"name":"FFDD3","type":"exact"},{"name":"Setleis syndrome","type":"exact"},{"name":"bitemporal forceps Marks syndrome","type":"related"},{"name":"bitemporal forceps marks syndrome","type":"related"},{"name":"facial ectodermal dysplasia","type":"related"},{"name":"focal Facial dermal dysplasia, type II","type":"related"},{"name":"focal Facial dermal dysplasia, type II, formerly","type":"related"},{"name":"focal facial dermal dysplasia 3, Setleis type","type":"exact"},{"name":"focal facial dermal dysplasia type 2","type":"related"},{"name":"focal facial dermal dysplasia type III","type":"exact"}],"termid":"MONDO:0009203","xrefs":{"Monarch":{"xref_id":"0009203"}}}


id: PBO:0054697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2106","termid":"PBO:0054697"}


id: PBO:0066635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIMS binding protein 3","termid":"PBO:0066635"}


id: MONDO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a cartilage tissue.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cartilage cancer","secondary_identifiers":["GARD:6004","MEDGEN:1843449","DOID:0060102","UMLS:C4290064"],"synonyms":[{"name":"cancer of cartilage tissue","type":"exact"},{"name":"cartilage tissue cancer","type":"exact"},{"name":"cartilaginous cancer","type":"exact"},{"name":"malignant cartilage tissue neoplasm","type":"exact"},{"name":"malignant neoplasm of cartilage tissue","type":"exact"}],"termid":"MONDO:0000639","xrefs":{"Monarch":{"xref_id":"0000639"}}}


id: PATO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having the shape of a scythe or sickle.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/falciform"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"falciform","synonyms":[{"name":"falcate","type":"exact"},{"name":"hooked","type":"exact"},{"name":"scythe-shaped","type":"exact"},{"name":"sickle-shaped","type":"exact"},{"name":"unciform","type":"exact"},{"name":"uncinate","type":"exact"}],"termid":"PATO:0002215"}


id: PBO:0075732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 divergent transcript","termid":"PBO:0075732"}


id: PBO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in ergosterol biosynthesis; conditional mutants produce less ergosterol, display impaired oxygen consumption, respiratory growth, mitochondrial iron utilization, and are more sensitive to oxidative stress; mutant bm-8 has a growth defect on iron-limited medium that is complemented by overexpression of Yfh1p; protein localizes to the cytoplasm, ER and nuclear envelope; highly conserved in ascomycetes","termid":"PBO:0086041"}


id: PR:P40381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin-associated protein swi6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.01c","synonyms":[{"name":"Spom972h-swi6","type":"exact"}],"termid":"PR:P40381"}


id: PATO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disfunctional quality held by the bearer when the latter is unable to perform a regular function(s).","definition_xrefs":["PATC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-functional","secondary_identifiers":["PATO:0001640"],"synonyms":[{"name":"defective","type":"related"},{"name":"disfunctional","type":"exact"},{"name":"failure","type":"related"},{"name":"functional failure","type":"exact"}],"termid":"PATO:0001511"}


id: GO:0052774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucosyl-N-acetylglucosamine + H2O = glucosamine + N-acetylglucosamine.","definition_xrefs":["PMID:16232910","PMID:15136574","PMID:16736587","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"glucosyl-N-acetylglucosamine glucosaminidase activity","termid":"GO:0052774"}


id: PBO:0117108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOBTB2 antisense RNA 1","termid":"PBO:0117108"}


id: SO:0002070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of an Alu mobile element with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alu_deletion","termid":"SO:0002070"}


id: GO:0034399
data:
  {"annotated_genes":["SJAG_03413","SJAG_04017","SJAG_01185","SJAG_01358","SJAG_03449","SJAG_03959","SJAG_03847","SJAG_04010","SJAG_03182","SJAG_04411","SJAG_00939","SJAG_04366","SJAG_03321","SJAG_01909","SJAG_04306","SJAG_02341","SJAG_02248","SJAG_02164","SJAG_00840","SJAG_04379","SJAG_01203","SJAG_04539","SJAG_04140","SJAG_02495","SJAG_04477","SJAG_02210","SJAG_03689","SJAG_04284","SJAG_00968","SJAG_04148","SJAG_01083","SJAG_01662","SJAG_02214","SJAG_00054","SJAG_00962","SJAG_02424","SJAG_03103","SJAG_03593","SJAG_01374","SJAG_01777","SJAG_02186","SJAG_01745","SJAG_04400","SJAG_02900","SJAG_03662","SJAG_02274","SJAG_00471","SJAG_01330","SJAG_00886","SJAG_02299","SJAG_03638","SJAG_04645","SJAG_02998","SJAG_03299","SJAG_01013"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61925,62110,63986,71989,75729,77837,79638,90823,91237,91583,92246,92774,92910,93555,93764,95007,95239,95273,95827,96834,97618,98264,99665,101712,101713,102614,103781,105277,105502,105843,106255,107297,108056,108081,108242,109194,110054,110407,110635,111807,111912,112282,112377,113105,113152,115001,116436,116721,116870,117494,117809,117961,118020,118441,119410],"is_not":false,"summary":null,"term":"GO:0034399"}]},"cv_name":"cellular_component","definition":"The portion of the nuclear lumen proximal to the inner nuclear membrane.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear lumen","termid":"GO:0031981"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00471":null,"SJAG_00840":null,"SJAG_00886":null,"SJAG_00939":null,"SJAG_00962":null,"SJAG_00968":null,"SJAG_01013":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01203":null,"SJAG_01330":null,"SJAG_01358":null,"SJAG_01374":null,"SJAG_01662":null,"SJAG_01745":null,"SJAG_01777":null,"SJAG_01909":null,"SJAG_02164":null,"SJAG_02186":null,"SJAG_02210":null,"SJAG_02214":null,"SJAG_02248":null,"SJAG_02274":null,"SJAG_02299":null,"SJAG_02341":null,"SJAG_02424":null,"SJAG_02495":null,"SJAG_02900":null,"SJAG_02998":null,"SJAG_03103":null,"SJAG_03182":null,"SJAG_03299":null,"SJAG_03321":null,"SJAG_03413":null,"SJAG_03449":null,"SJAG_03593":null,"SJAG_03638":null,"SJAG_03662":null,"SJAG_03689":null,"SJAG_03847":null,"SJAG_03959":null,"SJAG_04010":null,"SJAG_04017":null,"SJAG_04140":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04306":null,"SJAG_04366":null,"SJAG_04379":null,"SJAG_04400":null,"SJAG_04411":null,"SJAG_04477":null,"SJAG_04539":null,"SJAG_04645":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0034399","terms_by_termid":{"GO:0034399":null}}


id: GO:0009444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the conversion of pyruvate to acetylphosphate.","definition_xrefs":["MetaCyc:PYRUVOX-PWY"],"gene_count":0,"genotype_count":0,"name":"obsolete pyruvate oxidation (obsolete GO:0009444)","secondary_identifiers":["Wikipedia:Pyruvate_decarboxylation"],"termid":"GO:0009444"}


id: GO:0035383
data:
  {"annotated_genes":["SJAG_03290","SJAG_03310","SJAG_04895","SJAG_01402","SJAG_01524","SJAG_00947","SJAG_02741","SJAG_02769","SJAG_03064","SJAG_00866","SJAG_03715","SJAG_03909","SJAG_01187","SJAG_01474","SJAG_04499","SJAG_01989","SJAG_01139","SJAG_04007","SJAG_03471","SJAG_03731","SJAG_03313","SJAG_02158","SJAG_04865","SJAG_03813","SJAG_00902","SJAG_02380","SJAG_03349","SJAG_02006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[93272,70336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[119040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[116326,117745,81914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006084"},{"annotations":[110657,98689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006637"},{"annotations":[81965,116887,76062,78935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[109408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[79047,80660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"},{"annotations":[67252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[113334,117464],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[80892,74465,76364,89229,89665,75100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[76916],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[73511,91738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a thioester, a compound of general formula RC(=O)SR' in which the linking oxygen in an ester is replaced by a sulfur atom. They are the product of esterification between a carboxylic acid and a thiol.","definition_xrefs":["Wikipedia:Thioester","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_01139":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01474":null,"SJAG_01524":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02380":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03313":null,"SJAG_03349":null,"SJAG_03471":null,"SJAG_03715":null,"SJAG_03731":null,"SJAG_03813":null,"SJAG_03909":null,"SJAG_04007":null,"SJAG_04499":null,"SJAG_04865":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"thioester metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"thioester metabolism","type":"exact"}],"termid":"GO:0035383","terms_by_termid":{"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0006104":null,"GO:0006637":null,"GO:0010510":null,"GO:0019287":null,"GO:0019427":null,"GO:0035336":null,"GO:0035338":null,"GO:1990181":null,"GO:2001211":null,"GO:2001295":null}}


id: PBO:0028060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_DNA_replication_during_vegetative_growth","termid":"PBO:0028060"}


id: GO:0030934
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any collagen complex which links one collagen assembly, such as a collagen fibril or sheet, to other structures.","definition_xrefs":["ISBN:0721639976"],"gene_count":0,"genotype_count":0,"name":"obsolete anchoring collagen complex (obsolete GO:0030934)","synonyms":[{"name":"connecting collagen","type":"exact"},{"name":"linking collagen","type":"exact"}],"termid":"GO:0030934"}


id: GO:0140590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of a defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:28082413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"effector-mediated perturbation of host defenses by symbiont","termid":"GO:0140415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated suppression of host defense response","synonyms":[{"name":"effector-mediated suppression of host defenses","type":"related"},{"name":"effector-mediated suppression of host defenses by symbiont","type":"exact"}],"termid":"GO:0140590"}


id: GO:0008678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxy-D-gluconate + NAD+ = 3-dehydro-2-deoxy-D-gluconate + NADH + H+.","definition_xrefs":["EC:1.1.1.125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-deoxy-D-gluconate 3-dehydrogenase activity","secondary_identifiers":["RHEA:12160","MetaCyc:KDUD-RXN"],"synonyms":[{"name":"2-deoxy-D-gluconate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"2-deoxygluconate dehydrogenase activity","type":"related"},{"name":"2-keto-3-deoxygluconate oxidoreductase activity","type":"related"}],"termid":"GO:0008678"}


id: PBO:0068376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 169","termid":"PBO:0068376"}


id: PBO:0050421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H1","termid":"PBO:0050421"}


id: PBO:0040620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRAF-activated non-protein coding RNA","termid":"PBO:0040620"}


id: GO:0032515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of a phosphoprotein phosphatase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphoprotein phosphatase activity (obsolete GO:0032515)","synonyms":[{"name":"down regulation of calcineurin activity","type":"narrow"},{"name":"down regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"down regulation of protein phosphatase 2 activity","type":"related"},{"name":"down regulation of protein phosphatase 3 activity","type":"related"},{"name":"down regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"down regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"down-regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"down-regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"down-regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"downregulation of calcineurin activity","type":"narrow"},{"name":"downregulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"downregulation of protein phosphatase 2 activity","type":"related"},{"name":"downregulation of protein phosphatase 3 activity","type":"related"},{"name":"downregulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"downregulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"inhibition of calcineurin activity","type":"narrow"},{"name":"inhibition of phosphoprotein phosphatase activity","type":"narrow"},{"name":"inhibition of protein phosphatase 2 activity","type":"related"},{"name":"inhibition of protein phosphatase 3 activity","type":"related"},{"name":"inhibition of protein phosphatase type 2A activity","type":"narrow"},{"name":"inhibition of protein phosphatase type 2B activity","type":"narrow"},{"name":"negative regulation of calcineurin activity","type":"narrow"},{"name":"negative regulation of protein phosphatase 2 activity","type":"related"},{"name":"negative regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"negative regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"regulation of protein phosphatase 3 activity","type":"related"}],"termid":"GO:0032515"}


id: PBO:0049934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHIP antisense RNA 1","termid":"PBO:0049934"}


id: PBO:0005316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp1","termid":"PBO:0005316"}


id: PR:O14162
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rog1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase C4A8.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.10","synonyms":[{"name":"Spom972h-rog1","type":"exact"}],"termid":"PR:O14162"}


id: MONDO:1011099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alkaptonuria that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaptonuria, non-human animal","termid":"MONDO:1010270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaptonuria, rabbit","secondary_identifiers":["OMIA:001243-9986"],"termid":"MONDO:1011099","xrefs":{"Monarch":{"xref_id":"1011099"}}}


id: SO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL5 RNA leader sequence to the 5' end of an mRNA. SL5 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL5_acceptor_site","synonyms":[{"name":"SL5 acceptor site","type":"exact"}],"termid":"SO:0001750"}


id: PBO:0051955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR2 and SSPN antisense RNA 1","termid":"PBO:0051955"}


id: PBO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of the Ras1-Byr2 signalling pathway, acting downstream of Ras1","termid":"PBO:0002027"}


id: GO:0010292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP(out) + GDP(in) = GTP(in) + GDP(out).","definition_xrefs":["PMID:10514379","PMID:16553903","PMID:12553910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"GTP:GDP antiporter activity","termid":"GO:0010292"}


id: PBO:0042769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 72","termid":"PBO:0042769"}


id: FYPO:0003352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which DNA double-strand break formation occurs to a lower extent than normal during gene conversion at the mating-type locus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased mating type switching","termid":"FYPO:0000470"},{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased DNA double-strand break formation at mating-type locus","synonyms":[{"name":"decreased DNA double-strand break formation at mating-type locus during gene conversion","type":"exact"},{"name":"decreased DNA double-strand break formation at mating-type locus during mitotic cell cycle","type":"related"},{"name":"decreased DNA double-strand break formation at mating-type locus during vegetative growth","type":"exact"},{"name":"decreased DNA double-strand break formation during gene conversion at mating-type locus","type":"exact"},{"name":"decreased DSB formation at mat1","type":"exact"},{"name":"decreased DSB formation at mating-type locus","type":"exact"},{"name":"decreased DSB formation proximal to mat1","type":"exact"},{"name":"decreased gene conversion at mating-type locus, DNA double-strand break formation","type":"exact"},{"name":"reduced DNA double-strand break formation at mating-type locus","type":"exact"}],"termid":"FYPO:0003352"}


id: GO:0006534
data:
  {"annotated_genes":["SJAG_04425","SJAG_00582","SJAG_01880","SJAG_03102","SJAG_03671","SJAG_03494","SJAG_02972","SJAG_00988","SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95150,100397,105498,120179],"is_not":false,"summary":null,"term":"GO:0006534"},{"annotations":[112461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[60950,67673,77918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[115911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cysteine, 2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00582":null,"SJAG_00988":null,"SJAG_01880":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03494":null,"SJAG_03671":null,"SJAG_04305":null,"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"cysteine metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cysteine_metabolism"],"synonyms":[{"name":"cysteine metabolism","type":"exact"}],"termid":"GO:0006534","terms_by_termid":{"GO:0006534":null,"GO:0006535":null,"GO:0019344":null,"GO:0019450":null}}


id: GO:0051247
data:
  {"annotated_genes":["SJAG_00766","SJAG_02043","SJAG_01047","SJAG_01517","SJAG_02723","SJAG_02189","SJAG_01249","SJAG_01436","SJAG_00642","SJAG_01131","SJAG_01210","SJAG_01544","SJAG_03048","SJAG_04990","SJAG_03550","SJAG_04477","SJAG_01489","SJAG_03699","SJAG_02812","SJAG_05265","SJAG_00712","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[119121,71514,108583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[100580,114643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[102349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[68833,66655,69817,70331,62179,68326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[110841,104280,108586,113675,119064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[101271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"},{"annotations":[67806,70285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[74486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[78305,70286,67807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"positively_regulates","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01047":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01249":null,"SJAG_01436":null,"SJAG_01489":null,"SJAG_01517":null,"SJAG_01544":null,"SJAG_02043":null,"SJAG_02189":null,"SJAG_02723":null,"SJAG_02812":null,"SJAG_03048":null,"SJAG_03550":null,"SJAG_03699":null,"SJAG_04477":null,"SJAG_04990":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0032270"],"synonyms":[{"name":"activation of cellular protein metabolic process","type":"narrow"},{"name":"activation of protein metabolic process","type":"narrow"},{"name":"positive regulation of cellular protein metabolic process","type":"exact"},{"name":"positive regulation of cellular protein metabolism","type":"exact"},{"name":"positive regulation of protein metabolism","type":"exact"},{"name":"stimulation of cellular protein metabolic process","type":"narrow"},{"name":"stimulation of protein metabolic process","type":"narrow"},{"name":"up regulation of cellular protein metabolic process","type":"exact"},{"name":"up regulation of protein metabolic process","type":"exact"},{"name":"up-regulation of cellular protein metabolic process","type":"exact"},{"name":"up-regulation of protein metabolic process","type":"exact"},{"name":"upregulation of cellular protein metabolic process","type":"exact"},{"name":"upregulation of protein metabolic process","type":"exact"}],"termid":"GO:0051247","terms_by_termid":{"GO:0032436":null,"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0070131":null,"GO:0070134":null,"GO:1901800":null,"GO:1904352":null,"GO:1905786":null,"GO:2000767":null}}


id: PBO:0090756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3074 family protein, implicated in vesicle trafficking or lipid metabolism","termid":"PBO:0090756"}


id: PBO:0087662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the import motor (PAM complex); the PAM complex is a  component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); essential J-protein cochaperone that stimulates Ssc1p ATPase activity to drive import; inhibited by Pam16p","termid":"PBO:0087662"}


id: GO:0015355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of a monocarboxylate, any compound containing a single carboxyl group (COOH or COO-), by uniport, symport or antiport across a membrane by a carrier-mediated mechanism.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"secondary active monocarboxylate transmembrane transporter activity","synonyms":[{"name":"monocarboxylate porter activity","type":"related"}],"termid":"GO:0015355"}


id: GO:0043980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by the addition of an acetyl group to a lysine residue at position 12 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B-K12 acetylation (obsolete GO:0043980)","synonyms":[{"name":"histone H2B acetylation at K12","type":"exact"}],"termid":"GO:0043980"}


id: PBO:0081944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNRD2 divergent transcript","termid":"PBO:0081944"}


id: MONDO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"senile entropion","secondary_identifiers":["SCTID:55408009","ICD9:374.01","DOID:12836","MEDGEN:509837","UMLS:C0155188"],"synonyms":[{"name":"involutional entropion","type":"exact"}],"termid":"MONDO:0001591","xrefs":{"Monarch":{"xref_id":"0001591"}}}


id: MONDO:0011474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive familial heart block in which the cause of the disease is a mutation in the TRPM4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial heart block","termid":"MONDO:0019490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"progressive familial heart block type IB","secondary_identifiers":["MESH:C567037","ICD9:426.6","OMIM:604559","GARD:2610","DOID:0111076","SCTID:698250005","MEDGEN:370220","UMLS:C1970298"],"synonyms":[{"name":"PFHB1B","type":"exact"},{"name":"Pfhbib","type":"related"},{"name":"TRPM4 progressive familial heart block","type":"exact"},{"name":"heart block progressive familial type 1B","type":"related"},{"name":"progressive familial heart block caused by mutation in TRPM4","type":"exact"},{"name":"progressive familial heart block type 1B","type":"related"},{"name":"progressive familial heart block, type 1B","type":"related"},{"name":"progressive familial heart block, type IB","type":"related"}],"termid":"MONDO:0011474","xrefs":{"Monarch":{"xref_id":"0011474"}}}


id: MONDO:0018266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ataxia-telangiectasia variant is a rare, genetic, persistent combined dystonia characterized by clinical signs similar to ataxia-telangiectasia but with a later (usually adulthood) onset and slower progression. Patients typically present extrapyramidal signs, such as resting tremor, choreathetosis, and dystonia, as the initial symptoms and later often develop mild cerebellar ataxia (with gait usually preserved). Telangiectasia and immunodeficiency may be absent but secondary features of ataxia-telangiectasia, such as risk of malignancy, dysarthria and peripheral neuropathy, are frequently present.","definition_xrefs":["Orphanet:370109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"ataxia - telangiectasia variant","secondary_identifiers":["MEDGEN:406286","GARD:21597","UMLS:C1876175"],"synonyms":[{"name":"v-AT","type":"exact"}],"termid":"MONDO:0018266","xrefs":{"Monarch":{"xref_id":"0018266"}}}


id: PBO:0042360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD109 molecule","termid":"PBO:0042360"}


id: PBO:0075556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spen family transcriptional repressor","termid":"PBO:0075556"}


id: PBO:0070233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 171 pseudogene","termid":"PBO:0070233"}


id: GO:1903210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a glomerular visceral epithelial cell.","definition_xrefs":["GO_REF:0000085","PMID:23515840","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte apoptotic process","synonyms":[{"name":"glomerular podocyte apoptosis","type":"narrow"},{"name":"glomerular podocyte apoptotic process","type":"exact"},{"name":"glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"podocyte apoptosis","type":"narrow"}],"termid":"GO:1903210"}


id: GO:0005452
data:
  {"annotated_genes":["SJAG_00612","SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57575],"is_not":false,"summary":null,"term":"GO:0005452"},{"annotations":[104758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: inorganic anion(out) + solute(in) = inorganic anion (in) + solute(out).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"solute:inorganic anion antiporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1247665","Reactome:R-HSA-425482","Reactome:R-HSA-427666","Reactome:R-HSA-5627737","Reactome:R-HSA-1237038","Reactome:R-HSA-425577","Reactome:R-HSA-5656248"],"synonyms":[{"name":"inorganic anion exchanger activity","type":"exact"}],"termid":"GO:0005452","terms_by_termid":{"GO:0005452":null,"GO:0140987":null}}


id: MONDO:0008914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardioauditory syndrome of Sanchez Cascos","secondary_identifiers":["OMIM:212100","MEDGEN:395233","UMLS:C1859329","MESH:C535577"],"synonyms":[{"name":"Sanchez Cascos cardioauditory syndrome","type":"related"},{"name":"cardioauditory syndrome of Sanchez Cascos","type":"exact"}],"termid":"MONDO:0008914","xrefs":{"Monarch":{"xref_id":"0008914"}}}


id: GO:0052014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of protein macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host protein (obsolete GO:0052014)","synonyms":[{"name":"catabolism by organism of host protein","type":"exact"}],"termid":"GO:0052014"}


id: PBO:0067387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 492, pseudogene","termid":"PBO:0067387"}


id: GO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid inner membrane (obsolete GO:0031353)","synonyms":[{"name":"integral to plastid inner membrane","type":"narrow"}],"termid":"GO:0031353"}


id: PBO:0064852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 3","termid":"PBO:0064852"}


id: PBO:0063562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline, glutamate and leucine rich protein 1","termid":"PBO:0063562"}


id: MONDO:0014748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"progressive spondyloepimetaphyseal dysplasia-short stature-short fourth metatarsals-intellectual disability syndrome","secondary_identifiers":["GARD:17808","MEDGEN:1800305","UMLS:C5568882","OMIM:616723","Orphanet:457395"],"synonyms":[{"name":"SEMDFA","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, faden-ALKURAYA type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, faden-Alkuraya type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, progressive, with short stature, Facial Dysmorphism, short fourth metatarsals, and intellectual disability, with or without craniosynostosis","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, progressive, with short stature, Facial Dysmorphism, short fourth metatarsals, and mental retardation, with or without craniosynostosis","type":"related"}],"termid":"MONDO:0014748","xrefs":{"Monarch":{"xref_id":"0014748"}}}


id: PBO:0069987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1282, pseudogene","termid":"PBO:0069987"}


id: MONDO:0011038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebellar ataxia - areflexia - pes cavus - optic atrophy - sensorineural hearing loss (CAPOS syndrome) is a rare autosomal dominant neurological disorder characterized by early onset cerebellar ataxia, associated with areflexia, progressive optic atrophy, sensorineural deafness, a pes cavus deformity, and abnormal eye movements.","definition_xrefs":["Orphanet:1171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy plus syndrome","termid":"MONDO:0014720"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"},{"relation_name":"is_a","term_name":"ATP1A3-associated neurological disorder","termid":"MONDO:0700002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"cerebellar ataxia-areflexia-pes cavus-optic atrophy-sensorineural hearing loss syndrome","secondary_identifiers":["SCTID:720634003","GARD:1188","UMLS:C1832466","MEDGEN:318633","MESH:C535351","NANDO:1200526","OMIM:601338"],"synonyms":[{"name":"CAPOS","type":"related"},{"name":"CAPOS syndrome","type":"exact"},{"name":"cerebellar ataxia - areflexia - pes cavus - optic atrophy - sensorineural hearing loss","type":"related"},{"name":"cerebellar ataxia, areflexia, pes cavus, optic atrophy and sensorinural hearing loss","type":"related"},{"name":"cerebellar ataxia, areflexia, pes cavus, optic atrophy, and sensorineural hearing loss","type":"related"}],"termid":"MONDO:0011038","xrefs":{"Monarch":{"xref_id":"0011038"}}}


id: PBO:0061194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide N-methyltransferase","termid":"PBO:0061194"}


id: GO:0102872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-palmitoyl-2-linoleoyl-phosphatidylcholine + O2 + a reduced electron acceptor = 1-16:0-2-18:3-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:8102138","GOC:pz","PMID:15538555"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-16:0-2-18:2-phosphatidylcholine desaturase activity (obsolete GO:0102872)","termid":"GO:0102872"}


id: MONDO:0003081
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A disorder of the thalamus. Causes include brain neoplasms, cerebrovascular disorders, brain trauma, brain hypoxia, infections, and brain hemorrhage. Signs and symptoms include movement and sensory abnormalities, visual abnormalities, ataxia, and coma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"thalamic disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D013786","UMLS:C0039726","NCIT:C85186","MEDGEN:52693","DOID:4662"],"synonyms":[{"name":"disease of dorsal plus ventral thalamus","type":"exact"},{"name":"disease or disorder of dorsal plus ventral thalamus","type":"exact"},{"name":"disorder of dorsal plus ventral thalamus","type":"exact"},{"name":"dorsal plus ventral thalamus disease","type":"exact"},{"name":"dorsal plus ventral thalamus disease or disorder","type":"exact"}],"termid":"MONDO:0003081","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0003081"}}}


id: PBO:0061733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoredoxin","termid":"PBO:0061733"}


id: PBO:0050664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 2","termid":"PBO:0050664"}


id: PBO:0046963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83A antisense RNA 2","termid":"PBO:0046963"}


id: PBO:0085937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA transcribed as part of a bicistronic transcript with a predicted transcriptional repressor RGM1/YMR182C; mRNA is destroyed by nonsense-mediated decay (NMD); not an essential gene; YMR181C has a paralog, YPL229W, that arose from the whole genome duplication","termid":"PBO:0085937"}


id: PBO:0075656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin alpha, erythrocytic 1","termid":"PBO:0075656"}


id: PBO:0090286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein, lipocalin superfamily Svf1","termid":"PBO:0090286"}


id: PBO:0058013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3939","termid":"PBO:0058013"}


id: PBO:0027634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomeric_transcript_level","termid":"PBO:0027634"}


id: PBO:0054896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2310","termid":"PBO:0054896"}


id: MONDO:0007286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in heterozygous mutation in the VIM gene on chromosome 10p13.","definition_xrefs":["DOID:0110248","PMID:19126778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset partial cataract","termid":"MONDO:0020377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 30","secondary_identifiers":["MEDGEN:811741","UMLS:C3805411","OMIM:116300","MESH:C566157"],"synonyms":[{"name":"CTRCT30","type":"exact"},{"name":"cataract 30","type":"exact"},{"name":"cataract 30 pulverulent","type":"exact"},{"name":"cataract 30, multiple types","type":"related"},{"name":"cataract 30, pulverulent","type":"related"},{"name":"cataract Coppock-like","type":"exact"},{"name":"cataract type 30","type":"exact"}],"termid":"MONDO:0007286","xrefs":{"Monarch":{"xref_id":"0007286"}}}


id: MONDO:0016311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Bockenheimer syndrome","secondary_identifiers":["MEDGEN:1843091","Orphanet:217008","UMLS:C5679814","GARD:13063","icd11.foundation:1659229633"],"synonyms":[{"name":"genuine diffuse phlebectasia","type":"exact"}],"termid":"MONDO:0016311","xrefs":{"Monarch":{"xref_id":"0016311"}}}


id: PBO:0076236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 6","termid":"PBO:0076236"}


id: GO:0090396
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant cell papilla that is part of a leaf papilla cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant cell papilla","termid":"GO:0090395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"leaf papilla","termid":"GO:0090396"}


id: PBO:0065107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCA antisense RNA 1","termid":"PBO:0065107"}


id: PBO:0065436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 9","termid":"PBO:0065436"}


id: PBO:0049412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2C","termid":"PBO:0049412"}


id: MONDO:1010967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dandy-Walker syndrome that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dandy-Walker syndrome, non-human animal","termid":"MONDO:1010228"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dandy-Walker syndrome, sheep","secondary_identifiers":["OMIA:000258-9940"],"termid":"MONDO:1010967","xrefs":{"Monarch":{"xref_id":"1010967"}}}


id: PBO:0061878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 1 pseudogene 2","termid":"PBO:0061878"}


id: FYPO:0007076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the substrate specificity of a gene product that executes histone H3-K9 specific methyltransferase activity is altered. For example, preference for modified (e.g. ubiquitinated) H3 molecules may be enhanced or diminished.","definition_xrefs":["PMID:31468675","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered substrate specificity","termid":"FYPO:0003347"},{"relation_name":"is_a","term_name":"abnormal histone acetyltransferase activity","termid":"FYPO:0006453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000707","FYPO:0000654","FYPO:0000002","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0005447"],"is_obsolete":false,"name":"altered histone H3-K9 methyltransferase substrate specificity","synonyms":[{"name":"altered histone methyltransferase activity (H3-K9 specific) substrate specificity","type":"exact"}],"termid":"FYPO:0007076"}


id: PBO:0002793
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.4","termid":"PBO:0002793"}


id: PBO:0039697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aph-1 homolog A, gamma-secretase subunit","termid":"PBO:0039697"}


id: PBO:0030539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level","termid":"PBO:0030539"}


id: PBO:0061524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethylmaleimide-sensitive factor pseudogene 1","termid":"PBO:0061524"}


id: PBO:0091095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine hydroxylase/sphingolipid delta-4 desaturase Sur2","termid":"PBO:0091095"}


id: PBO:0076696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation regulator 1","termid":"PBO:0076696"}


id: PR:O42943
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family F member 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03209","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C16H5.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.08c","secondary_identifiers":["UniProtKB:O42943"],"synonyms":[{"name":"Spom972h-ABCF2","type":"exact"}],"termid":"PR:O42943"}


id: GO:0004201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of interleukin 1-beta by specific cleavage of Asp116-Ala117 and Asp27-Gly28 bonds in precursor. Enzymes with this function can also hydrolyze the terminal bond in the small-molecule substrate, Ac-Tyr-Val-Ala-Asp-NHMec.","definition_xrefs":["EC:3.4.22.36"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-1 activity (obsolete GO:0004201)","synonyms":[{"name":"ICE","type":"broad"},{"name":"caspase-1 activity","type":"exact"}],"termid":"GO:0004201"}


id: PBO:0012294
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation impaired","termid":"PBO:0012294"}


id: GO:0051994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the phosphorus atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"P-methyltransferase activity","termid":"GO:0051994"}


id: PBO:0071383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 6","termid":"PBO:0071383"}


id: SO:0000118
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript with a translational frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"translationally_frameshifted","termid":"SO:0000887"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_with_translational_frameshift","synonyms":[{"name":"transcript with translational frameshift","type":"exact"}],"termid":"SO:0000118"}


id: PBO:0077102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 9","termid":"PBO:0077102"}


id: GO:0008295
data:
  {"annotated_genes":["SJAG_04481","SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76756,79625],"is_not":false,"summary":null,"term":"GO:0008295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03632":null,"SJAG_04481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"spermidine anabolism","type":"exact"},{"name":"spermidine biosynthesis","type":"exact"},{"name":"spermidine formation","type":"exact"},{"name":"spermidine synthesis","type":"exact"}],"termid":"GO:0008295","terms_by_termid":{"GO:0008295":null}}


id: FYPO:0003414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell septum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to septum","synonyms":[{"name":"normal protein localisation to septum","type":"exact"},{"name":"normal protein localization to cell septum","type":"exact"},{"name":"normal protein localization to division septum","type":"exact"},{"name":"normal protein localization to septum during mitotic cell cycle","type":"related"},{"name":"normal protein localization to septum during vegetative growth","type":"exact"}],"termid":"FYPO:0003414"}


id: GO:0051380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to norepinephrine, (3,4-dihydroxyphenyl-2-aminoethanol), a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"catecholamine binding","termid":"GO:1901338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"norepinephrine binding","synonyms":[{"name":"noradrenaline binding","type":"exact"}],"termid":"GO:0051380"}


id: MONDO:0000304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Talaromyces marneffei.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic systemic mycosis","termid":"MONDO:0045033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penicilliosis","secondary_identifiers":["DOID:0050288","MEDGEN:697372","SCTID:372936000","UMLS:C1274008","SCTID:713315007"],"synonyms":[{"name":"Penicillium marneffei infectious disease","type":"exact"},{"name":"Talaromyces marneffei caused disease or disorder","type":"exact"},{"name":"Talaromyces marneffei disease or disorder","type":"exact"},{"name":"Talaromyces marneffei infectious disease","type":"exact"},{"name":"infection caused by Penicillium marneffei","type":"exact"},{"name":"infection caused by Talaromyces marneffei","type":"exact"},{"name":"infection due to Penicillium marneffei","type":"exact"}],"termid":"MONDO:0000304","xrefs":{"Monarch":{"xref_id":"0000304"}}}


id: GO:1900161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phospholipid scramblase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phospholipid scramblase activity (obsolete GO:1900161)","termid":"GO:1900161"}


id: PBO:0082636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of GID Complex that confers ubiquitin ligase (U3) activity; necessary for polyubiquitination and degradation of the gluconeogenic enzyme fructose-1,6-bisphosphatase; forms dimer with Fyv10p that is then recruited to GID Complex by Gid8p; also required for sporulation; conserved protein that has a degenerate RING finger domain","termid":"PBO:0082636"}


id: GO:1902239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator.","definition_xrefs":["GOC:krc","GOC:TermGenie","GOC:mtg_apoptosis","PMID:16571598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902219"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1902238"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902254"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1990127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"narrow"}],"termid":"GO:1902239"}


id: MONDO:0008734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of adrenal cortex carcinoma that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal cell carcinoma","termid":"MONDO:0003008"},{"relation_name":"is_a","term_name":"adrenal cortex carcinoma","termid":"MONDO:0006639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"adrenocortical carcinoma, hereditary","secondary_identifiers":["UMLS:C1859972","MESH:C565972","GARD:15132","MEDGEN:348508","OMIM:202300"],"synonyms":[{"name":"ADCC","type":"related"},{"name":"adrenocortical carcinoma, hereditary","type":"exact"},{"name":"adrenocortical carcinoma, paediatric","type":"related"},{"name":"adrenocortical carcinoma, pediatric","type":"related"},{"name":"hereditary adrenal cortex carcinoma","type":"exact"}],"termid":"MONDO:0008734","xrefs":{"Monarch":{"xref_id":"0008734"}}}


id: PBO:0013446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase complex subunit Erf4","termid":"PBO:0013446"}


id: GO:0052579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1R,4S)-menthone + NADP+ = (R)-pulegone + H+ + NADPH. Also converts (2R,5R)-isomenthone into (R)-pulegone.","definition_xrefs":["EC:1.3.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(+)-pulegone reductase (NADP+) activity","synonyms":[{"name":"(+)-isomenthone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052579"}


id: GO:0090559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by a membrane.","definition_xrefs":["GOC:kmv","PMID:22677064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane permeability","termid":"GO:0090559"}


id: MOD:01385
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to 3-hydroxy-L-phenylalanine.","definition_xrefs":["PubMed:15651011","PubMed:16734421","PubMed:7398618","OMSSA:63","ChEBI:16795","PubMed:1880060","PubMed:7844053","PubMed:10625477","RESID:AA0462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-phenylalanine","synonyms":[{"name":"(2S,3S)-2-amino-3-hydroxy-3-phenylpropanoic acid","type":"exact"},{"name":"3-hydoxyphenylalanine","type":"exact"},{"name":"3-hydroxy-L-phenylalanine","type":"exact"},{"name":"3-phenyl-L-serine","type":"exact"},{"name":"3HyPhe","type":"exact"},{"name":"L-threo-3-phenylserine","type":"exact"},{"name":"MOD_RES 3-hydroxyphenylalanine","type":"exact"},{"name":"beta-hydroxyphenylalanine","type":"exact"},{"name":"beta-phenylserine","type":"exact"},{"name":"hydroxylationf","type":"exact"}],"termid":"MOD:01385"}


id: PBO:0049659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 13","termid":"PBO:0049659"}


id: MONDO:0007966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to uveal melanoma","termid":"MONDO:0007966","xrefs":{"Monarch":{"xref_id":"0007966"}}}


id: MONDO:0005196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Presence of structurally anomalous spermatozoa in the semen; malformations include the physical bending of the sperm to produce kinks or bends","definition_xrefs":["EFO:0002625"],"gene_count":0,"genotype_count":0,"name":"obsolete teratozoospermia (obsolete MONDO:0005196)","secondary_identifiers":["SCTID:236817003"],"termid":"MONDO:0005196","xrefs":{"Monarch":{"xref_id":"0005196"}}}


id: GO:2000867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of estrone secretion","synonyms":[{"name":"regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000867"}


id: MONDO:0002674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"stricture or kinking of ureter","secondary_identifiers":["UMLS:C0341728","ICD9:593.3","MEDGEN:574605","DOID:3508"],"termid":"MONDO:0002674","xrefs":{"Monarch":{"xref_id":"0002674"}}}


id: GO:0046166
data:
  {"annotated_genes":["SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73785],"is_not":false,"summary":null,"term":"GO:0046166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glyceraldehyde-3-phosphate, an important intermediate in glycolysis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"glyceraldehyde 3-phosphate biosynthesis","type":"exact"},{"name":"glyceraldehyde 3-phosphate biosynthetic process","type":"exact"},{"name":"glyceraldehyde-3-phosphate anabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate biosynthesis","type":"exact"},{"name":"glyceraldehyde-3-phosphate formation","type":"exact"},{"name":"glyceraldehyde-3-phosphate synthesis","type":"exact"}],"termid":"GO:0046166","terms_by_termid":{"GO:0046166":null}}


id: PBO:0070244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 185 pseudogene","termid":"PBO:0070244"}


id: GO:0030926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of calcium into a 4Mn-Ca-4O complex by bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide as in the photosystem II catalytic site.","definition_xrefs":["RESID:AA0366","PMID:14764885"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium incorporation into metallo-oxygen cluster via bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide (obsolete GO:0030926)","termid":"GO:0030926"}


id: SO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a transcription factor binding site.","definition_xrefs":["EBI:fc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_variant","termid":"SO:0001566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TF_binding_site_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:tf_binding_site_variant","type":"exact"},{"name":"TF binding site variant","type":"exact"},{"name":"VEP:TF_binding_site_variant","type":"exact"}],"termid":"SO:0001782"}


id: MONDO:0044796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nevus characterized by the presence of spindle-shaped melanocytes.","definition_xrefs":["NCIT:C66758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell neoplasm","termid":"MONDO:0020664"},{"relation_name":"is_a","term_name":"spitz nevus","termid":"MONDO:0044793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"spindle cell nevus","secondary_identifiers":["MEDGEN:60220","SCTID:253038006","UMLS:C0206738"],"synonyms":[{"name":"spindle cell nevus","type":"exact"}],"termid":"MONDO:0044796","xrefs":{"Monarch":{"xref_id":"0044796"}}}


id: PBO:0077299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 39B","termid":"PBO:0077299"}


id: PBO:0075183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPF divergent transcript","termid":"PBO:0075183"}


id: PBO:0034676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_frequency_of_meiotic_crossover_associated_with_gene_conversion","termid":"PBO:0034676"}


id: PBO:0052813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 79","termid":"PBO:0052813"}


id: PBO:0018102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NiCoT heavy metal ion transmembrane transporter Nic1","termid":"PBO:0018102"}


id: PBO:0046289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 6","termid":"PBO:0046289"}


id: PBO:0045753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin converting enzyme 1","termid":"PBO:0045753"}


id: PBO:0080835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ybeY metalloendoribonuclease","termid":"PBO:0080835"}


id: GO:0018410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The alteration of the C-terminal amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein amino acid modification","synonyms":[{"name":"peptide or protein carboxyl-terminal blocking","type":"related"},{"name":"peptide/protein carboxyl-terminal blocking","type":"related"}],"termid":"GO:0018410"}


id: GO:0070657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a neuromast following its loss or destruction.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast regeneration","termid":"GO:0070657"}


id: PBO:0066755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 53","termid":"PBO:0066755"}


id: PBO:0040033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 7, pseudogene","termid":"PBO:0040033"}


id: PBO:0028568
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_chromosome_segregation","termid":"PBO:0028568"}


id: PBO:0078488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 7-2","termid":"PBO:0078488"}


id: GO:0010494
data:
  {"annotated_genes":["SJAG_02263","SJAG_00474","SJAG_04672","SJAG_02419","SJAG_01317","SJAG_03424","SJAG_04480","SJAG_04744","SJAG_03283","SJAG_02239","SJAG_16457","SJAG_03762","SJAG_03696","SJAG_00544","SJAG_03157","SJAG_04772","SJAG_01512","SJAG_01954","SJAG_00391","SJAG_01479","SJAG_00507","SJAG_01159","SJAG_01222","SJAG_03277","SJAG_02573","SJAG_02663","SJAG_04427","SJAG_01026","SJAG_02164","SJAG_05010","SJAG_00686","SJAG_03214","SJAG_02628","SJAG_05694","SJAG_04640","SJAG_04342","SJAG_02592","SJAG_03023","SJAG_02995","SJAG_01548","SJAG_03276","SJAG_16454","SJAG_03498","SJAG_01650"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57647,60504,68381,72346,74339,74774,75891,76389,78534,80569,81147,89323,90168,90975,91306,91518,91722,92013,92089,92131,93383,94391,94851,94852,96207,96407,96408,96641,97946,98979,99658,100801,101811,107234,107494,107587,107588,108867,111831,111933,113031,115292,115590,119274],"is_not":false,"summary":null,"term":"GO:0010494"}]},"cv_name":"cellular_component","definition":"A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.","definition_xrefs":["PMID:17601829","PMID:20368989","PMID:17967451","GOC:ans","PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00391":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_01026":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01650":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02663":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03498":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_04342":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic stress granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Stress_granule"],"synonyms":[{"name":"cytoplasmic mRNP granule","type":"exact"},{"name":"stress granule","type":"exact"}],"termid":"GO:0010494","terms_by_termid":{"GO:0010494":null}}


id: MONDO:0032867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic cancer, susceptibility to, 5","secondary_identifiers":["MEDGEN:1684838","OMIM:618680","UMLS:C5231459"],"synonyms":[{"name":"PANCREATIC CANCER, SUSCEPTIBILITY TO, 5","type":"related"},{"name":"PNCA5","type":"related"}],"termid":"MONDO:0032867","xrefs":{"Monarch":{"xref_id":"0032867"}}}


id: PBO:0069063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 310, pseudogene","termid":"PBO:0069063"}


id: GO:0061675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the rhamnose-binding lectin (RBL) family, a family of animal lectins that show specific binding activities to L-rhamnose or D-galactose.","definition_xrefs":["PMID:22312473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RBL family protein binding","synonyms":[{"name":"rhamnose-binding lectin family protein binding","type":"exact"}],"termid":"GO:0061675"}


id: GO:0046551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell. A retinal cone cell is one of the two photoreceptor subtypes in a camera-type eye.","definition_xrefs":["PMID:3937883","GOC:mtg_sensu","PMID:3076112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"},{"relation_name":"part_of","term_name":"retinal cone cell differentiation","termid":"GO:0042670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell fate commitment","termid":"GO:0046551"}


id: GO:0061351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neural precursor cells, resulting in the expansion of a cell population. A neural precursor cell is either a nervous system stem cell or a nervous system progenitor cell.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural precursor cell proliferation","termid":"GO:0061351"}


id: PBO:0040726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated transcription factor 1 pseudogene 1","termid":"PBO:0040726"}


id: PBO:0086616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the nucleus and the cytoplasm","termid":"PBO:0086616"}


id: PBO:0081524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 433","termid":"PBO:0081524"}


id: MONDO:0035683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenal hypoplasia congenita (obsolete MONDO:0035683)","secondary_identifiers":["Orphanet:595337"],"termid":"MONDO:0035683","xrefs":{"Monarch":{"xref_id":"0035683"}}}


id: MONDO:0024330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the anatomical structures of the middle ear secondary to an infectious process. Bacterial etiology is most common, but both viral and fungal pathogens are also possible. Symptoms include erythema and edema of the tympanic membrane, pain, and possibly fever. In severe infections, inflammation and edema of the structures of the middle ear can lead to perforation of the tympanic membrane secondary to the buildup of pressure in the narrow space.","definition_xrefs":["NCIT:C84354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otitis media","termid":"MONDO:0005441"},{"relation_name":"is_a","term_name":"ear infection","termid":"MONDO:0021666"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious otitis media","secondary_identifiers":["MEDGEN:443472","UMLS:C2827407"],"synonyms":[{"name":"AOM","type":"exact"},{"name":"acute otitis Media","type":"exact"},{"name":"infectious otitis Media","type":"exact"},{"name":"middle Ear infection","type":"exact"},{"name":"otitis media","type":"broad"}],"termid":"MONDO:0024330","xrefs":{"Monarch":{"xref_id":"0024330"}}}


id: PBO:0058243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4530","termid":"PBO:0058243"}


id: MONDO:0018713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate, locally aggressive and rarely metastasizing blood vessel neoplasm. It is characterized by the presence of hobnail endothelial cells and formation of arborizing vascular channels.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioendothelioma","termid":"MONDO:0021121"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retiform hemangioendothelioma","secondary_identifiers":["SCTID:403982005","Orphanet:458763","UMLS:C1304512","GARD:21908","MEDGEN:266274","NCIT:C27511"],"synonyms":[{"name":"hobnail hemangioendothelioma","type":"exact"},{"name":"retiform hemangioendothelioma","type":"exact"}],"termid":"MONDO:0018713","xrefs":{"Monarch":{"xref_id":"0018713"}}}


id: PBO:0030347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_unequal_mitotic_sister_chromatid_segregation,_with_smeared_DNA","termid":"PBO:0030347"}


id: GO:0097238
data:
  {"annotated_genes":["SJAG_02960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106968],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylglyoxal stimulus. Methylglyoxal is a 2-oxoaldehyde derived from propanal.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methylglyoxal","termid":"GO:0051595"},{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methylglyoxal","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097238","terms_by_termid":{"GO:0140041":null}}


id: MONDO:0010084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrosuria, hiatus hernia and intellectual disability","secondary_identifiers":["MEDGEN:338583","UMLS:C1848963","MESH:C564792","OMIM:272000"],"synonyms":[{"name":"sucrosuria, hiatus hernia and intellectual disability","type":"exact"},{"name":"sucrosuria, hiatus hernia and mental retardation","type":"exact"}],"termid":"MONDO:0010084","xrefs":{"Monarch":{"xref_id":"0010084"}}}


id: MONDO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of angle-closure glaucoma.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary angle-closure glaucoma","termid":"MONDO:0001868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic closed-angle glaucoma","secondary_identifiers":["UMLS:C0154947","SCTID:33647009","ICD9:365.23","DOID:14445","MEDGEN:509736"],"synonyms":[{"name":"anatomical narrow angle glaucoma","type":"exact"},{"name":"angle-closure glaucoma, chronic","type":"exact"},{"name":"chronic angle-closure glaucoma","type":"exact"},{"name":"chronic narrow angle glaucoma","type":"exact"}],"termid":"MONDO:0001966","xrefs":{"Monarch":{"xref_id":"0001966"}}}


id: GO:0044732
data:
  {"annotated_genes":["SJAG_04884","SJAG_05290","SJAG_00646","SJAG_01805","SJAG_05266","SJAG_00229","SJAG_03200","SJAG_04931","SJAG_03810","SJAG_03615","SJAG_03376","SJAG_02336","SJAG_03592","SJAG_02104","SJAG_02186","SJAG_04609","SJAG_00800","SJAG_00333","SJAG_06270","SJAG_01563","SJAG_02550","SJAG_03264","SJAG_02921","SJAG_00773","SJAG_02624","SJAG_02332","SJAG_02246","SJAG_03062","SJAG_01224","SJAG_02556","SJAG_05207","SJAG_04468","SJAG_05264","SJAG_03048","SJAG_04239","SJAG_01188","SJAG_03708","SJAG_01386","SJAG_03287","SJAG_04841","SJAG_01799","SJAG_00356","SJAG_00910","SJAG_04901","SJAG_02795","SJAG_04280","SJAG_03259","SJAG_01546","SJAG_03843","SJAG_03116","SJAG_04455","SJAG_01330","SJAG_01464","SJAG_01775","SJAG_01620","SJAG_02444","SJAG_05185","SJAG_05309","SJAG_02609","SJAG_02169","SJAG_00918","SJAG_01785","SJAG_03501","SJAG_00526","SJAG_02058","SJAG_03891","SJAG_01760","SJAG_00104","SJAG_01422","SJAG_04558","SJAG_01215","SJAG_02045","SJAG_04745","SJAG_04498","SJAG_03491","SJAG_02542","SJAG_00856","SJAG_04457","SJAG_03026","SJAG_01756","SJAG_01401","SJAG_04943","SJAG_00666","SJAG_04140","SJAG_05205","SJAG_03342","SJAG_01371","SJAG_01790","SJAG_03602","SJAG_01232","SJAG_00082","SJAG_04595","SJAG_00724","SJAG_03936","SJAG_00907","SJAG_01370","SJAG_03508","SJAG_00807","SJAG_03052","SJAG_04551","SJAG_04597","SJAG_02761","SJAG_00719","SJAG_00317","SJAG_03612","SJAG_02886","SJAG_01745","SJAG_02266","SJAG_05978","SJAG_04980","SJAG_01297","SJAG_03835","SJAG_03544","SJAG_02232","SJAG_03216","SJAG_01082","SJAG_03351","SJAG_02299","SJAG_05315","SJAG_07018","SJAG_05196","SJAG_04461","SJAG_00982","SJAG_01146","SJAG_04653","SJAG_03540","SJAG_02616","SJAG_02098","SJAG_02514","SJAG_00142","SJAG_02737","SJAG_01242","SJAG_01538","SJAG_02724","SJAG_00472","SJAG_03681","SJAG_03695","SJAG_02923"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66684,70157,72280,72482,76436,89202,90774,91063,91434,91468,91566,91812,91949,92546,92807,92817,93012,93167,93213,93590,94130,94365,94766,95099,95298,95577,95635,95719,95780,96070,96097,96245,96253,96626,98135,98187,98246,98256,98343,98585,98638,99146,99323,99676,99901,100299,100490,101480,101968,102022,102087,102260,102408,102424,102487,103161,103514,104036,104217,104948,105616,105720,105792,106487,107097,107400,108241,108282,108373,108557,108772,109435,110189,110276,110684,110699,110970,111503,111853,111911,112120,112128,112881,113011,113459,113641,114439,114734,114971,115635,116665,116779,116895,116932,117272,117881,117984,118496,118693,119006,119179,119191,119265,119285,120224,120768,121628,121630,121640],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[96838,99814,104898,107302,116972,118397],"is_not":true,"summary":null,"term":"GO:0044732"},{"annotations":[98732,100144,101732],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061493"},{"annotations":[110789,111549,112532,114605,114807,117101,118924],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061496"},{"annotations":[102873,110790,112533,104707,111550,113390],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061497"},{"annotations":[104713,101736,102832,112475,104249,109071,107273,108312,113151,92968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071958"},{"annotations":[112477,114811,94681,110796,97498,104252,104716,101546,108313,113157,111555,109472,112536,116473,106959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071957"},{"annotations":[110797,118929,109026],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061499"},{"annotations":[94682,117454],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160065"}]},"cv_name":"cellular_component","definition":"The microtubule organizing center that forms as part of the mitotic cell cycle; functionally homologous to the animal cell centrosome.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":138,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00093":null,"SJAG_00104":null,"SJAG_00142":null,"SJAG_00229":null,"SJAG_00317":null,"SJAG_00333":null,"SJAG_00356":null,"SJAG_00471":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00719":null,"SJAG_00724":null,"SJAG_00773":null,"SJAG_00800":null,"SJAG_00807":null,"SJAG_00856":null,"SJAG_00907":null,"SJAG_00910":null,"SJAG_00918":null,"SJAG_00982":null,"SJAG_01065":null,"SJAG_01082":null,"SJAG_01146":null,"SJAG_01188":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01232":null,"SJAG_01242":null,"SJAG_01293":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01386":null,"SJAG_01401":null,"SJAG_01422":null,"SJAG_01464":null,"SJAG_01538":null,"SJAG_01546":null,"SJAG_01563":null,"SJAG_01584":null,"SJAG_01620":null,"SJAG_01745":null,"SJAG_01756":null,"SJAG_01760":null,"SJAG_01775":null,"SJAG_01785":null,"SJAG_01790":null,"SJAG_01799":null,"SJAG_01805":null,"SJAG_02045":null,"SJAG_02058":null,"SJAG_02098":null,"SJAG_02104":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02232":null,"SJAG_02246":null,"SJAG_02266":null,"SJAG_02274":null,"SJAG_02299":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02444":null,"SJAG_02514":null,"SJAG_02542":null,"SJAG_02550":null,"SJAG_02556":null,"SJAG_02609":null,"SJAG_02616":null,"SJAG_02624":null,"SJAG_02724":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02795":null,"SJAG_02886":null,"SJAG_02921":null,"SJAG_02923":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03052":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03200":null,"SJAG_03216":null,"SJAG_03259":null,"SJAG_03264":null,"SJAG_03287":null,"SJAG_03342":null,"SJAG_03351":null,"SJAG_03376":null,"SJAG_03491":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03540":null,"SJAG_03544":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03612":null,"SJAG_03615":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03708":null,"SJAG_03810":null,"SJAG_03835":null,"SJAG_03843":null,"SJAG_03891":null,"SJAG_03936":null,"SJAG_04140":null,"SJAG_04239":null,"SJAG_04280":null,"SJAG_04455":null,"SJAG_04457":null,"SJAG_04461":null,"SJAG_04468":null,"SJAG_04498":null,"SJAG_04551":null,"SJAG_04558":null,"SJAG_04595":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04653":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_04901":null,"SJAG_04931":null,"SJAG_04943":null,"SJAG_04980":null,"SJAG_05185":null,"SJAG_05196":null,"SJAG_05205":null,"SJAG_05207":null,"SJAG_05264":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05309":null,"SJAG_05315":null,"SJAG_05978":null,"SJAG_06270":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:32243490":null},"termid":"GO:0044732","terms_by_termid":{"GO:0044732":null,"GO:0061493":null,"GO:0061496":null,"GO:0061497":null,"GO:0061499":null,"GO:0071957":null,"GO:0071958":null,"GO:0160065":null}}


id: PBO:0086439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative kinase; suppressor of GTPase mutant; similar to bovine rhodopsin kinase; may have a role in intracellular sterol transport","termid":"PBO:0086439"}


id: PBO:0029493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_meiosis_II_spindle","termid":"PBO:0029493"}


id: PBO:0012245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor protein BolA domain (predicted)","termid":"PBO:0012245"}


id: PBO:0080998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 34","termid":"PBO:0080998"}


id: PBO:0041027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'), 5'-bisphosphate nucleotidase 2","termid":"PBO:0041027"}


id: PBO:0029208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_ubiquitination","termid":"PBO:0029208"}


id: MONDO:0012767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the CST3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 11","secondary_identifiers":["MEDGEN:393833","OMIM:611953","UMLS:C2677774","DOID:0110023","MESH:C567450"],"synonyms":[{"name":"ARMD11","type":"exact"},{"name":"CST3 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 11","type":"exact"},{"name":"age-related macular degeneration caused by mutation in CST3","type":"exact"},{"name":"macular Degeneration, age-related, type 11","type":"exact"},{"name":"macular degeneration, age-related, 11","type":"related"}],"termid":"MONDO:0012767","xrefs":{"Monarch":{"xref_id":"0012767"}}}


id: PBO:0084189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H2A; core histone protein required for chromatin assembly and chromosome function; one of two nearly identical (see also HTA1) subtypes; DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p","termid":"PBO:0084189"}


id: PBO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf3 (predicted)","termid":"PBO:0001628"}


id: PBO:0060307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL12B pseudogene 2","termid":"PBO:0060307"}


id: FYPO:0003323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which succinate dehydrogenase (ubiquinone) activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal succinate dehydrogenase (ubiquinone) activity","termid":"FYPO:0003322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished succinate dehydrogenase (ubiquinone) activity","synonyms":[{"name":"succinate dehydrogenase (ubiquinone) activity abolished","type":"exact"}],"termid":"FYPO:0003323"}


id: GO:0046811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of histone deacetylase, which catalyzes of the removal of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes.","definition_xrefs":["GOC:ai","PMID:10482575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"histone deacetylase regulator activity","termid":"GO:0035033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140678","GO:0004857","GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"histone deacetylase inhibitor activity","termid":"GO:0046811"}


id: GO:0009886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after animal embryonic development, by which anatomical structures are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic animal morphogenesis","synonyms":[{"name":"post-embryonic morphogenesis of an anatomical structure","type":"exact"}],"termid":"GO:0009886"}


id: MONDO:0015304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arachnoiditis (ARC) is a chronic inflammation of the arachnoid layer of the meninges, of which adhesive arachnoiditis is the most severe form, characterized by debilitating, intractable neurogenic back and limb pain and a range of other neurological problems.","definition_xrefs":["Orphanet:137817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious meningitis","termid":"MONDO:0004796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachnoiditis","secondary_identifiers":["MEDGEN:8175","MESH:D001100","UMLS:C0003708","DOID:12156","icd11.foundation:414817254","NORD:800","GARD:5839","MedDRA:10003074","SCTID:13980006","NCIT:C37913"],"synonyms":[{"name":"adhesive arachnoiditis","type":"exact"},{"name":"arachnoid mater inflammation","type":"exact"},{"name":"chronic arachnoiditis","type":"exact"},{"name":"inflammation of arachnoid mater","type":"exact"}],"termid":"MONDO:0015304","xrefs":{"Monarch":{"xref_id":"0015304"}}}


id: MONDO:1012713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epilepsy that occurs in dogs due to a mutation in the LGI2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, dog","termid":"MONDO:1010411"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign familial juvenile epilepsy, LGI2-related, dog","secondary_identifiers":["OMIA:001596-9615"],"synonyms":[{"name":"BFJE","type":"exact"},{"name":"epilepsy, benign familial juvenile, LGI2-related, dog","type":"exact"}],"termid":"MONDO:1012713","xrefs":{"Monarch":{"xref_id":"1012713"}}}


id: GO:0004777
data:
  {"annotated_genes":["SJAG_00674","SJAG_03293"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77798,79322],"is_not":false,"summary":null,"term":"GO:0004777"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+.","definition_xrefs":["RHEA:13217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-semialdehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0009013"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.2.1.24","GO:0008952","MetaCyc:SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN","Reactome:R-HSA-888548"],"synonyms":[{"name":"succinate semialdehyde dehydrogenase activity","type":"broad"},{"name":"succinate semialdehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"succinate-semialdehyde dehydrogenase activity","type":"broad"},{"name":"succinate-semialdehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"succinic semialdehyde dehydrogenase activity","type":"broad"},{"name":"succinyl semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004777","terms_by_termid":{"GO:0004777":null}}


id: PBO:0074776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3I","termid":"PBO:0074776"}


id: GO:0035408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a threonine residue at position 6 of the histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-T6 phosphorylation (obsolete GO:0035408)","termid":"GO:0035408"}


id: PBO:0033796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_fidelity_of_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0033796"}


id: GO:0033863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 1,5-diphosphate + ATP = 5-phospho-alpha-D-ribose 1-diphosphate + ADP + H+.","definition_xrefs":["RHEA:20109","EC:2.7.4.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ribose 1,5-bisphosphate phosphokinase activity","secondary_identifiers":["KEGG_REACTION:R06836","MetaCyc:RXN0-1401"],"synonyms":[{"name":"ATP:ribose-1,5-bisphosphate phosphotransferase activity","type":"related"},{"name":"PhnN","type":"related"},{"name":"ribose 1,5-bisphosphokinase activity","type":"related"}],"termid":"GO:0033863"}


id: GO:0070561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by vitamin D binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","PMID:12637589","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"},{"relation_name":"part_of","term_name":"cellular response to vitamin D","termid":"GO:0071305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"vitamin D receptor signaling pathway","synonyms":[{"name":"VDR signaling pathway","type":"exact"},{"name":"calcitriol signaling pathway","type":"narrow"},{"name":"intracellular vitamin D receptor signaling pathway","type":"exact"},{"name":"nuclear receptor-mediated vitamin D signaling pathway","type":"exact"},{"name":"vitamin D receptor signalling pathway","type":"exact"}],"termid":"GO:0070561"}


id: PBO:0076059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STON1-GTF2A1L readthrough","termid":"PBO:0076059"}


id: PBO:0017915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacyl-CoA lyase Hac1 (predicted)","termid":"PBO:0017915"}


id: PBO:0085981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; protein-protein interactions suggest a possible role in actin patch formation; YNR065C is not an essential gene","termid":"PBO:0085981"}


id: GO:0045136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the secondary sexual characteristics over time, from their formation to the mature structures. In humans, these include growth of axillary, chest, and pubic hair, voice changes, testicular/penile enlargement, breast development and menstrual periods. Development occurs in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of secondary sexual characteristics","termid":"GO:0045136"}


id: PBO:0052382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF23 and PAQR5 antisense RNA 1","termid":"PBO:0052382"}


id: PBO:0004506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transporter Liz1","termid":"PBO:0004506"}


id: GO:1904095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endosperm development.","definition_xrefs":["PMID:25194028","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of endosperm development","termid":"GO:2000014"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"endosperm development","termid":"GO:0009960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endosperm development","synonyms":[{"name":"down regulation of endosperm development","type":"exact"},{"name":"down-regulation of endosperm development","type":"exact"},{"name":"downregulation of endosperm development","type":"exact"},{"name":"inhibition of endosperm development","type":"narrow"}],"termid":"GO:1904095"}


id: GO:1900164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a nodal protein binding to an activin receptor on the surface of a target cell, which contributes to the establishment of lateral mesoderm with respect to the left and right halves.","definition_xrefs":["GOC:TermGenie","GOC:vk","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900164)","synonyms":[{"name":"nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1900164"}


id: PBO:0084392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; forms heteroheptameric complex (with Lsm2p, Lsm3p, Lsm4p, Lsm5p, Lsm6p, and Lsm7p) involved in degradation of cytoplasmic mRNAs; also enters the nucleus and positively regulates transcription initiation; unlike most Sm-like proteins, Lsm1p requires both its SM-domain and C-terminal domain for RNA-binding; binds to mRNAs under glucose starvation, most often in the 3' UTR; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0084392"}


id: FYPO:0005831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip is abnormal. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule during vegetative growth","termid":"FYPO:0005830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"abnormal protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"abnormal protein transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005831"}


id: PBO:0056704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meis homeobox 3 pseudogene 2","termid":"PBO:0056704"}


id: MONDO:0859007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"mosaic Legius syndrome","secondary_identifiers":["UMLS:C5816780","Orphanet:634511","MEDGEN:1843406"],"termid":"MONDO:0859007","xrefs":{"Monarch":{"xref_id":"0859007"}}}


id: MONDO:0011178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological condition characterized by the occurrence of seizures during the first year of life (Benign familial infantile epilepsy) and choreoathetotic dyskinetic attacks during childhood or adolescence.","definition_xrefs":["Orphanet:31709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"paroxysmal dyskinesia","termid":"MONDO:0015427"},{"relation_name":"is_a","term_name":"benign partial infantile seizures","termid":"MONDO:0015642"},{"relation_name":"is_a","term_name":"PRRT2-associated paroxysmal movement disorder","termid":"MONDO:0100556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0003441"],"is_obsolete":false,"name":"infantile convulsions and choreoathetosis","secondary_identifiers":["MESH:C535522","GARD:8553","MEDGEN:356123","NCIT:C126650","OMIM:602066","SCTID:715534008","UMLS:C1865926"],"synonyms":[{"name":"ICCA","type":"related"},{"name":"ICCA syndrome","type":"exact"},{"name":"Icca syndrome","type":"related"},{"name":"PKD/IC","type":"exact"},{"name":"convulsions, familial infantile, with paroxysmal choreoathetosis","type":"related"},{"name":"convulsions, infantile, with paroxysmal choreoathetosis, familial","type":"related"},{"name":"infantile convulsions and choreoathetosis","type":"exact"},{"name":"infantile convulsions and paroxysmal choreoathetosis, familial","type":"related"},{"name":"paroxysmal kinesigenic dyskinesia and infantile convulsions","type":"exact"},{"name":"paroxysmal kinesigenic dyskinesia with infantile convulsions","type":"related"}],"termid":"MONDO:0011178","xrefs":{"Monarch":{"xref_id":"0011178"}}}


id: PBO:0038895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRA1 antisense RNA 1","termid":"PBO:0038895"}


id: SOFP:internal_synonym
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_synonym","termid":"SOFP:internal_synonym"}


id: MONDO:0035787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation without fistula (obsolete MONDO:0035787)","secondary_identifiers":["Orphanet:601002"],"termid":"MONDO:0035787","xrefs":{"Monarch":{"xref_id":"0035787"}}}


id: GO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of S-methylmethionine from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"S-methylmethionine transmembrane transporter activity","secondary_identifiers":["GO:0015178"],"synonyms":[{"name":"S-methylmethionine permease activity","type":"exact"},{"name":"S-methylmethionine transporter activity","type":"broad"}],"termid":"GO:0000100"}


id: MOD:00931
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other - BHTOH is formed upon metabolism of BHT with P450 enzymes. The BHTOH is further metabolized to its quinone methide (electrophile) which reacts with -SH and -NH2 groups","definition_xrefs":["PubMed:11085420","Unimod:498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of t-butyl hydroxylated BHT (BHTOH) to C, H or K","synonyms":[{"name":"BHTOH","type":"related"},{"name":"Michael addition of t-butyl hydroxylated BHT (BHTOH) to C, H or K","type":"related"}],"termid":"MOD:00931"}


id: PBO:0047791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box E3","termid":"PBO:0047791"}


id: PBO:0088696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein","termid":"PBO:0088696"}


id: PBO:0077870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 1","termid":"PBO:0077870"}


id: PBO:0030023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_asymmetric_protein_localization_to_old_or_new_mitotic_spindle_pole_body","termid":"PBO:0030023"}


id: PBO:0089032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine salvage haloacid dehalogenase-like hydrolase Utr4","termid":"PBO:0089032"}


id: PBO:0042702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF2 antisense RNA 2","termid":"PBO:0042702"}


id: MONDO:0004365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A uveal melanoma characterized by the presence of tumor cell necrosis.","definition_xrefs":["NCIT:C7990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveal melanoma","termid":"MONDO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"necrotic uveal melanoma","secondary_identifiers":["UMLS:C0279695","MEDGEN:1669717","DOID:7808"],"termid":"MONDO:0004365","xrefs":{"Monarch":{"xref_id":"0004365"}}}


id: PBO:0046864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 2B","termid":"PBO:0046864"}


id: PBO:0070762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 18","termid":"PBO:0070762"}


id: PBO:0116805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPDC1 antisense RNA 2","termid":"PBO:0116805"}


id: GO:1902693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of superoxide dismutase activity.","definition_xrefs":["PMID:10026301","GOC:TermGenie","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"superoxide dismutase complex","termid":"GO:1902693"}


id: PBO:0009386
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Perrault syndrome","termid":"PBO:0009386"}


id: MONDO:0100478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain disorder caused by pathogenic variants in NFIA that is characterized by developmental delay, corpus callosum agenesis/hypoplasia and craniofacial dysmorphism, such as macrocephaly (caused by hydrocephalus or ventriculomegaly), low-set ears, anteverted nostrils and micrognathia. Urinary tract defects (e.g. vesicoureteral reflux, urinary incontinence) are also frequently associated. Other reported variable manifestations include hypotonia, tethered spinal cord, Chiari type I malformation and seizures.","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain malformations with or without urinary tract defects","secondary_identifiers":["MEDGEN:1392440","UMLS:C4478940","OMIM:613735"],"termid":"MONDO:0100478","xrefs":{"Monarch":{"xref_id":"0100478"}}}


id: MONDO:0004092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary thymic carcinoma, characterized by the presence of tumor cell lobules with peripheral palisading, and a basophilic staining pattern. More than half of reported cases were associated with the presence of a multilocular thymic cyst. Metastases to lung and liver have been reported in approximately 30% of cases.","definition_xrefs":["NCIT:C6456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basaloid squamous cell carcinoma","termid":"MONDO:0003486"},{"relation_name":"is_a","term_name":"thymus squamous cell carcinoma","termid":"MONDO:0003493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"thymic basaloid carcinoma","secondary_identifiers":["DOID:7050","MEDGEN:231420","UMLS:C1332464"],"synonyms":[{"name":"Thymus basaloid carcinoma","type":"exact"},{"name":"basaloid carcinoma of Thymus","type":"exact"},{"name":"basaloid carcinoma of the Thymus","type":"exact"},{"name":"thymic basaloid carcinoma","type":"exact"},{"name":"thymus basaloid squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004092","xrefs":{"Monarch":{"xref_id":"0004092"}}}


id: FYPO:0006399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, and structure of the septin ring is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology during vegetative growth","termid":"FYPO:0000352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal septin ring morphology","synonyms":[{"name":"abnormal medial cortex septin ring morphology","type":"exact"},{"name":"abnormal septin ring morphology during mitotic cell cycle","type":"related"},{"name":"abnormal septin ring morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0006399"}


id: GO:0090046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.","definition_xrefs":["GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription regulator activity (obsolete GO:0090046)","synonyms":[{"name":"regulation of transcription regulator activity","type":"exact"}],"termid":"GO:0090046"}


id: PBO:0072461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 25","termid":"PBO:0072461"}


id: PBO:0040916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 20","termid":"PBO:0040916"}


id: GO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the adherens junction.","definition_xrefs":["GOC:mah","PMID:26412237","GOC:aruk","GOC:bc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to adherens junction","secondary_identifiers":["GO:1904696"],"synonyms":[{"name":"protein localisation in adherens junction","type":"exact"},{"name":"protein localisation in cell-cell adherens junction","type":"exact"},{"name":"protein localisation to adherens junction","type":"exact"},{"name":"protein localisation to cell-cell adherens junction","type":"exact"},{"name":"protein localization in adherens junction","type":"exact"},{"name":"protein localization in cell-cell adherens junction","type":"exact"},{"name":"protein localization to cell-cell adherens junction","type":"exact"}],"termid":"GO:0071896"}


id: MONDO:0013983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive hypohidrotic ectodermal dysplasia","termid":"MONDO:0016619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"ectodermal dysplasia 11B, hypohidrotic/hair/tooth type, autosomal recessive","secondary_identifiers":["GARD:15885","UMLS:C3539920","DOID:0111654","OMIM:614941","MEDGEN:761671"],"synonyms":[{"name":"ECTD11B","type":"related"},{"name":"ectodermal dysplasia 11B, hypohidrotic/hair/tooth type, autosomal recessive","type":"exact"},{"name":"ectodermal dysplasia, anhidrotic","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic","type":"related"}],"termid":"MONDO:0013983","xrefs":{"Monarch":{"xref_id":"0013983"}}}


id: MONDO:0009720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare multiple congenital anomalies syndrome characterized by facial dysmorphism (hypertelorism, broad and high nasal bridge, depressed nasal ridge, short columella, underdeveloped maxilla, and prominent cupid-bow upper lip vermillion), mild to severe congenital sensorineural hearing loss, and skeletal abnormalities consisting of brachytelephalangy and broad thumbs and halluces with large, rounded epiphyses. Additional manifestations that have been reported include pulmonary valve stenosis, voice hoarseness and renal agenesis.","definition_xrefs":["Orphanet:2662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Keipert syndrome","secondary_identifiers":["OMIM:255980","MEDGEN:338088","GARD:267","SCTID:763774001","UMLS:C1850627","MESH:C538337","NCIT:C186306","OMIM:301026","DOID:0111842"],"synonyms":[{"name":"KPTS","type":"exact"},{"name":"Keipert syndrome","type":"exact"},{"name":"Keipert syndrome, X-linked recessive","type":"exact"},{"name":"nasodigitoacoustic syndrome","type":"exact"},{"name":"nasodigitoacoustic syndrome, formerly","type":"exact"}],"termid":"MONDO:0009720","xrefs":{"Monarch":{"xref_id":"0009720"}}}


id: FYPO:0002237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cerulenin. Cells stop growing (and may die) at a concentration of cerulenin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to cerulenin","synonyms":[{"name":"hypersensitive to cerulenin","type":"exact"},{"name":"sensitive to cerulenin during mitotic cell cycle","type":"related"},{"name":"sensitive to cerulenin during vegetative growth","type":"exact"}],"termid":"FYPO:0002237"}


id: PBO:0067503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 643, pseudogene","termid":"PBO:0067503"}


id: SOFP:finished
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"If the annotation of the feature is complete","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finished","termid":"SOFP:finished"}


id: PBO:0108960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source_file","termid":"PBO:0108960"}


id: PBO:0081035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 12C","termid":"PBO:0081035"}


id: PBO:0027798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tetraplatin","termid":"PBO:0027798"}


id: PBO:0085905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0085905"}


id: PBO:0111314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein, TspO","termid":"PBO:0111314"}


id: GO:1904200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which iodide is transported across a membrane.","definition_xrefs":["PMID:20392814","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodide transport","termid":"GO:0015705"},{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"iodide transmembrane transport","termid":"GO:1904200"}


id: GO:1990158
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of the helicase loading complex DnaB-DnaC, replication restart proteins DnaT, PriA and PriB, and associated DNA. Involved in the restart of DNA replication after a stalled replication fork has been repaired.","definition_xrefs":["GOC:bhm","PMID:8663105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-primosome complex","termid":"GO:1990099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"DnaB-DnaC-DnaT-PriA-PriB complex","synonyms":[{"name":"DnaB-DnaC-DnaT-PriA-PriB preprimosome","type":"exact"},{"name":"phi-X174-type preprimosome","type":"related"}],"termid":"GO:1990158"}


id: MONDO:0020043
data:
  {"annotated_genes":["SJAG_01945","SJAG_04641","SJAG_05212"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[86982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[86837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01945":null,"SJAG_04641":null,"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive congenital cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19412","MEDGEN:1843070","Orphanet:98095","UMLS:C5681519"],"termid":"MONDO:0020043","terms_by_termid":{"MONDO:0008943":null,"MONDO:0014104":null,"MONDO:0014503":null},"xrefs":{"Monarch":{"xref_id":"0020043"}}}


id: PBO:0088161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"v-SNARE component of the vacuolar SNARE complex; involved in vesicle fusion; inhibits ATP-dependent Ca(2+) transport activity of Pmc1p in the vacuolar membrane","termid":"PBO:0088161"}


id: PBO:0036509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent reductase for Dph3, Cbr1 (predicted)","termid":"PBO:0036509"}


id: PATO:0000389
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's having a sudden onset, sharp rise, and short course.","definition_xrefs":["dictionary:reference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute","termid":"PATO:0000389"}


id: MONDO:1010961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prostate cancer that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, non-human animal","termid":"MONDO:1010223"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer, dog","secondary_identifiers":["OMIA:002335-9615"],"termid":"MONDO:1010961","xrefs":{"Monarch":{"xref_id":"1010961"}}}


id: GO:1903976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glial cell migration.","definition_xrefs":["GO_REF:0000058","GOC:nc","GOC:BHF","PMID:19100238","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"negatively_regulates","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell migration","synonyms":[{"name":"down regulation of glia cell migration","type":"exact"},{"name":"down regulation of glial cell migration","type":"exact"},{"name":"down-regulation of glia cell migration","type":"exact"},{"name":"down-regulation of glial cell migration","type":"exact"},{"name":"downregulation of glia cell migration","type":"exact"},{"name":"downregulation of glial cell migration","type":"exact"},{"name":"inhibition of glia cell migration","type":"narrow"},{"name":"inhibition of glial cell migration","type":"narrow"},{"name":"negative regulation of glia cell migration","type":"exact"}],"termid":"GO:1903976"}


id: MONDO:0005161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process caused by a human papillomavirus. This infection can cause abnormal tissue growth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human papilloma virus infection","secondary_identifiers":["EFO:0001668","ICD9:079.4","NCIT:C27851","MEDGEN:87475","SCTID:240532009","UMLS:C0343641","DOID:11166"],"synonyms":[{"name":"Human Papillomavirus infection","type":"exact"},{"name":"Human papilloma Virus infection","type":"exact"},{"name":"Human papillomavirus caused disease or disorder","type":"exact"},{"name":"Human papillomavirus disease or disorder","type":"exact"},{"name":"Human papillomavirus infectious disease","type":"exact"}],"termid":"MONDO:0005161","xrefs":{"Monarch":{"xref_id":"0005161"}}}


id: PATO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of whether the bearer's being covered by a liquid.","definition_xrefs":["wordreference.com:wordreference.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wetness","termid":"PATO:0001822"}


id: PR:Q9USX8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lea1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USX8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 small nuclear ribonucleoprotein A' (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.08c","synonyms":[{"name":"Spom972h-lea1","type":"exact"},{"name":"U2 snRNP A' (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USX8"}


id: GO:0003090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine released from the nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by epinephrine-norepinephrine","termid":"GO:0001997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by neuronal epinephrine-norepinephrine","synonyms":[{"name":"increased force of heart contraction by epinephrine-norepinephrine released from the nerve endings","type":"exact"},{"name":"increased force of heart contraction by neuronal adrenaline-noradrenaline","type":"exact"},{"name":"increased force of heart contraction by neuronal epinephrine-norepinephrine","type":"exact"},{"name":"positive regulation of heart contraction by adrenaline-noradrenaline","type":"related"},{"name":"positive regulation of heart contraction by epinephrine-norepinephrine","type":"related"}],"termid":"GO:0003090"}


id: FYPO:0001712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular coenzyme Q10 level","termid":"FYPO:0006978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"coenzyme Q10 absent from cell","synonyms":[{"name":"UQ-10 absent from cell","type":"exact"},{"name":"coenzyme Q10 absent from cell during mitotic cell cycle","type":"related"},{"name":"coenzyme Q10 absent from cell during vegetative growth","type":"exact"},{"name":"ubiquinone 10 absent from cell","type":"exact"}],"termid":"FYPO:0001712"}


id: PBO:0063739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 4","termid":"PBO:0063739"}


id: PBO:0064758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase C","termid":"PBO:0064758"}


id: PBO:0082221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha aminoadipate reductase; catalyzes the reduction of alpha-aminoadipate to alpha-aminoadipate 6-semialdehyde, which is the fifth step in biosynthesis of lysine; activation requires posttranslational phosphopantetheinylation by Lys5p","termid":"PBO:0082221"}


id: GO:0034114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of heterotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of heterotypic cell-cell adhesion","termid":"GO:0034114"}


id: GO:0043891
data:
  {"annotated_genes":["SJAG_06622","SJAG_06621","SJAG_03903","SJAG_02945","SJAG_00027","SJAG_03828","SJAG_02135"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74289,111347,82205,111351,111349,111352,76449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004365"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD(P)+ = 3-phospho-D-glyceroyl phosphate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_02135":null,"SJAG_02945":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (phosphorylating) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GAPDHSYNEC-RXN"],"synonyms":[{"name":"D-glyceraldehyde 3-phosphate:NAD(P)+ oxidoreductase (phosphorylating)","type":"exact"},{"name":"NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase activity","type":"related"},{"name":"glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) (phosphorylating)","type":"exact"},{"name":"triosephosphate dehydrogenase (NAD(P))","type":"exact"},{"name":"triosephosphate dehydrogenase (NAD(P)+)","type":"related"}],"termid":"GO:0043891","terms_by_termid":{"GO:0004365":null}}


id: MOD:00019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-isoleucine.","definition_xrefs":["PubMed:6692818","ChEBI:30009","RESID:AA0010","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine residue","synonyms":[{"name":"(2S,3S)-2-amino-3-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-3-methylpentanoic acid","type":"exact"},{"name":"3-methyl-norvaline","type":"exact"},{"name":"Ile","type":"exact"},{"name":"Isoleucyl","type":"exact"},{"name":"L-erythro-isoleucine","type":"exact"},{"name":"L-isoleucine","type":"exact"},{"name":"alpha-amino-beta-methylvaleric acid","type":"exact"}],"termid":"MOD:00019"}


id: FYPO:0007729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle is decreased during anaphase.","definition_xrefs":["PomBase:mah","PMID:16920624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle","termid":"FYPO:0002825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle during anaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle during anaphase","type":"exact"},{"name":"decreased protein localization to elongating mitotic spindle","type":"related"},{"name":"decreased protein localization to mitotic spindle during anaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle during anaphase of mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle during mitotic anaphase","type":"exact"},{"name":"reduced protein localization to mitotic spindle during anaphase","type":"exact"}],"termid":"FYPO:0007729"}


id: PBO:0053520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 513","termid":"PBO:0053520"}


id: MONDO:0858944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system benign neoplasm that is characterized by a dinucleotide mutation at codon 385 of the PDGFR gene. It usually occurs in the septum pellucidum but has also been described in the corpus callosum and periventricular white matter of the lateral ventricle. It is composed of oligodendrocyte-like cells in a prominent myxoid stroma.","definition_xrefs":["DOID:0081285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myxoid glioneuronal tumor","secondary_identifiers":["NCIT:C179229","UMLS:C5555545","MEDGEN:1791986"],"termid":"MONDO:0858944","xrefs":{"Monarch":{"xref_id":"0858944"}}}


id: PBO:0036158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_invertase_activity_during_glucose_starvation","termid":"PBO:0036158"}


id: PBO:0046804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VIII associated 2","termid":"PBO:0046804"}


id: PBO:0002183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Muskelin homolog (predicted)","termid":"PBO:0002183"}


id: PBO:0086872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative sterol transfer protein; localizes to puncta in the cortical ER; probable role in retrograde transport of sterols from the plasma membrane to the ER; one of six StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes; contains GRAM, StART-like (VASt) and two PH-like domains","termid":"PBO:0086872"}


id: GO:0019098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that is associated with reproduction.","definition_xrefs":["GOC:pr","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive behavior","secondary_identifiers":["GO:0044705","GO:0033057","GO:0044704"],"synonyms":[{"name":"multi-organism reproductive behavior","type":"narrow"},{"name":"multicellular organism reproductive behavior","type":"narrow"},{"name":"reproductive behavior in a multicellular organism","type":"exact"},{"name":"reproductive behaviour","type":"exact"},{"name":"single-organism reproductive behavior","type":"related"}],"termid":"GO:0019098"}


id: PBO:0056242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog 3, pseudogene","termid":"PBO:0056242"}


id: GO:0009911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of flower development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of flower development","termid":"GO:0009909"},{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flower development","synonyms":[{"name":"activation of flower development","type":"narrow"},{"name":"stimulation of flower development","type":"narrow"},{"name":"up regulation of flower development","type":"exact"},{"name":"up-regulation of flower development","type":"exact"},{"name":"upregulation of flower development","type":"exact"}],"termid":"GO:0009911"}


id: GO:0006200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP catabolic process (obsolete GO:0006200)","secondary_identifiers":["Wikipedia:ATP_hydrolysis"],"synonyms":[{"name":"ATP breakdown","type":"exact"},{"name":"ATP catabolism","type":"exact"},{"name":"ATP degradation","type":"exact"},{"name":"ATP hydrolysis","type":"narrow"}],"termid":"GO:0006200"}


id: MONDO:0004374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma arising from the soft tissue, and occurring in adults.","definition_xrefs":["NCIT:C7925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"extraosseous osteosarcoma","termid":"MONDO:0002621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult extraskeletal osteosarcoma","secondary_identifiers":["DOID:7827","MEDGEN:83016","UMLS:C0278985"],"synonyms":[{"name":"adult extraosseous osteosarcoma","type":"exact"},{"name":"adult extraskeletal osteosarcoma","type":"exact"},{"name":"extraosseous osteosarcoma of adults","type":"exact"},{"name":"extraskeletal osteosarcoma","type":"broad"}],"termid":"MONDO:0004374","xrefs":{"Monarch":{"xref_id":"0004374"}}}


id: GO:0141101
data:
  {"annotated_genes":["SJAG_03367"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64509],"is_not":false,"summary":null,"term":"GO:0141101"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: Catalysis of the reaction: S-adenosyl-L-methionine + uridine44 in tRNASer = 2'-O-methyluridine44 in tRNASer + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:18025252","RHEA:43100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03367":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0140101","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"tRNA(Ser) (uridine(44)-2'-O-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-12368","EC:2.1.1.211","Reactome:R-HSA-6788707"],"synonyms":[{"name":"tRNA(Ser) (uracil(44)-2'-O-)-methyltransferase activity","type":"exact"}],"termid":"GO:0141101","terms_by_termid":{"GO:0141101":null}}


id: PBO:0029344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_tRNA_absent_from_cell","termid":"PBO:0029344"}


id: MONDO:0008832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A visceral heterotaxy characterized by complete atrioventricular septal defect with a common atrium and univentricular AV connection, total anomalous pulmonary drainage, and transposition or malposition of the great arteries and may be associated with bilateral trilobed lungs, midline liver, asplenia and situs inversus affecting other organs that has material basis in homozygous mutation in the GDF1 gene on chromosome 19p12.","definition_xrefs":["DOID:0060856","PMID:14648004","PMID:20413652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right atrial isomerism","secondary_identifiers":["UMLS:C3178806","MedDRA:10068335","GARD:6795","MEDGEN:465274","OMIM:208530","HP:0011536","Orphanet:97548"],"synonyms":[{"name":"Ivemark Syndrome","type":"exact"},{"name":"Ivemark syndrome","type":"exact"},{"name":"Polyasplenia","type":"related"},{"name":"RAI","type":"related"},{"name":"Vah, autosomal recessive","type":"related"},{"name":"asplenia syndrome","type":"related"},{"name":"asplenia with cardiovascular anomalies","type":"exact"},{"name":"bilateral right-sidedness sequence","type":"related"},{"name":"heterotaxy, Visceroatrial, autosomal recessive","type":"related"},{"name":"polysplenia syndrome","type":"related"},{"name":"right atrial isomerism","type":"exact"},{"name":"right atrial isomerism (disease)","type":"exact"},{"name":"right atrial isomerism (ivemark)","type":"exact"},{"name":"right isomerism","type":"related"},{"name":"splenic agenesis syndrome","type":"related"}],"termid":"MONDO:0008832","xrefs":{"Monarch":{"xref_id":"0008832"}}}


id: PBO:0085948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant displays elevated frequency of mitochondrial genome loss","termid":"PBO:0085948"}


id: PBO:0083694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme that mediates the conjugation of Rub1p; a ubiquitin-like protein, to other proteins; related to E2 ubiquitin-conjugating enzymes","termid":"PBO:0083694"}


id: GO:0006964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-negative bacteria.","definition_xrefs":["PMID:10973475","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002813"},{"relation_name":"is_a","term_name":"positive regulation of antibacterial peptide biosynthetic process","termid":"GO:0006963"},{"relation_name":"positively_regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","synonyms":[{"name":"activation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"narrow"},{"name":"anti-Gram-negative bacterial peptide induction","type":"exact"},{"name":"anti-Gram-negative bacterial polypeptide induction","type":"exact"},{"name":"stimulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"narrow"},{"name":"up regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"up-regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"upregulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"}],"termid":"GO:0006964"}


id: GO:0034807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5-dihydroxybenzo(a)pyrene + C1 unit = hydroxymethoxybenzo(a)pyrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,5-dihydroxybenzo(a)pyrene methyltransferase activity (obsolete GO:0034807)","termid":"GO:0034807"}


id: PBO:0086809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YHR022C is not an essential gene","termid":"PBO:0086809"}


id: PBO:0070254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 197 pseudogene","termid":"PBO:0070254"}


id: GO:0004364
data:
  {"annotated_genes":["SJAG_00238","SJAG_05181","SJAG_00179","SJAG_03863"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76447,78860,80407,115844],"is_not":false,"summary":null,"term":"GO:0004364"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.","definition_xrefs":["EC:2.5.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00179":null,"SJAG_00238":null,"SJAG_03863":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"glutathione transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9026901","Reactome:R-HSA-3301943","Reactome:R-HSA-9026911","Reactome:R-HSA-9026777","MetaCyc:GSHTRAN-RXN","Reactome:R-HSA-176059","Reactome:R-HSA-5423653","Reactome:R-HSA-9011595","Reactome:R-HSA-9748996","Reactome:R-HSA-9753280","Reactome:R-HSA-9026780","Reactome:R-HSA-176054"],"synonyms":[{"name":"RX:glutathione R-transferase activity","type":"related"},{"name":"S-(hydroxyalkyl)glutathione lyase activity","type":"related"},{"name":"glutathione S-alkyl transferase activity","type":"related"},{"name":"glutathione S-alkyltransferase activity","type":"related"},{"name":"glutathione S-aralkyltransferase activity","type":"related"},{"name":"glutathione S-aryltransferase activity","type":"related"},{"name":"glutathione S-transferase activity","type":"related"},{"name":"glutathione conjugation reaction","type":"exact"}],"termid":"GO:0004364","terms_by_termid":{"GO:0004364":null}}


id: PBO:0062528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily U member 8","termid":"PBO:0062528"}


id: GO:0090228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of red or far-red light signaling pathway","termid":"GO:0090227"},{"relation_name":"positively_regulates","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of red or far-red light signaling pathway","synonyms":[{"name":"positive regulation of phytochrome signaling pathway","type":"exact"},{"name":"positive regulation of red or far-red light signalling pathway","type":"exact"}],"termid":"GO:0090228"}


id: FYPO:0008042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment or maintenance of actin cytoskeleton polarity is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal establishment or maintenance of actin cytoskeleton polarity during vegetative growth","termid":"FYPO:0000198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0005568","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished establishment or maintenance of actin cytoskeleton polarity during vegetative growth","synonyms":[{"name":"abolished actin cytoskeleton polarisation during vegetative growth","type":"related"},{"name":"abolished actin cytoskeleton polarization during vegetative growth","type":"related"}],"termid":"FYPO:0008042"}


id: FYPO:0001429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a larger volume, greater length, greater diameter, and greater length:diameter ratio than normal.","definition_xrefs":["PMID:10388806","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen cell","termid":"FYPO:0000025"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"swollen elongated cell","synonyms":[{"name":"elongated cell with increased cell volume","type":"exact"},{"name":"enlarged elongated cell","type":"related"},{"name":"large elongated cell","type":"related"}],"termid":"FYPO:0001429"}


id: PR:Q10659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo14 gene.","definition_xrefs":["UniProtKB:Q10659","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane glycoprotein spo14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.01","synonyms":[{"name":"SEC12-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spo14","type":"exact"},{"name":"sporulation-specific protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10659"}


id: MONDO:0100408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(16;21)(q24;q22). (A cytogenetic abnormality that refers to the translocation of the long arm (q24) of chromosome 16 and the long arm (q22) of chromosome 22. It is associated with RUNX1/CBFA2T3 fusions, myelodysplastic syndromes and acute myeloid leukemia.)","definition_xrefs":["NCIT:C168773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(16;21)(q24;q22)","synonyms":[{"name":"AML, t(16;21)(q24;q22)","type":"exact"}],"termid":"MONDO:0100408","xrefs":{"Monarch":{"xref_id":"0100408"}}}


id: GO:0034515
data:
  {"annotated_genes":["SJAG_02900","SJAG_04088","SJAG_03638"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62868,74880,81641],"is_not":false,"summary":null,"term":"GO:0034515"}]},"cv_name":"cellular_component","definition":"An aggregation of proteasome core protease (CP) and regulatory particle (RP) complexes that localizes in the cytoplasm as dot-like structures when cells are in a quiescent state.","definition_xrefs":["PMID:18504300","GOC:rb","PMID:30204036","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02900":null,"SJAG_03638":null,"SJAG_04088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"proteasome storage granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000117":null},"synonyms":[{"name":"PSG","type":"related"}],"termid":"GO:0034515","terms_by_termid":{"GO:0034515":null}}


id: PBO:0054477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1877","termid":"PBO:0054477"}


id: MONDO:0025489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoid neoplastic disease in cattle caused by the bovine leukemia virus. Enzootic bovine leukosis may take the form of lymphosarcoma, malignant lymphoma, or leukemia but the presence of malignant cells in the blood is not a consistent finding.","definition_xrefs":["MESH:D016583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine leukemia","termid":"MONDO:0700135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enzootic bovine leukosis","synonyms":[{"name":"bovine Leukoses","type":"related"},{"name":"bovine Leukoses, enzootic","type":"related"},{"name":"bovine Lymphomas","type":"related"},{"name":"bovine Lymphosarcomas","type":"related"},{"name":"bovine leukaemia","type":"related"},{"name":"bovine leukemia","type":"related"},{"name":"bovine leukemias","type":"related"},{"name":"bovine leukosis","type":"related"},{"name":"bovine leukosis, enzootic","type":"related"},{"name":"bovine lymphoma","type":"related"},{"name":"bovine lymphosarcoma","type":"related"},{"name":"enzootic bovine Leukoses","type":"related"},{"name":"leukemia, bovine","type":"related"},{"name":"leukemias, bovine","type":"related"},{"name":"leukoses, bovine","type":"related"},{"name":"leukoses, enzootic bovine","type":"related"},{"name":"leukosis, bovine","type":"related"},{"name":"leukosis, enzootic bovine","type":"related"},{"name":"lymphoma, bovine","type":"related"},{"name":"lymphomas, bovine","type":"related"},{"name":"lymphosarcoma, bovine","type":"related"},{"name":"lymphosarcomas, bovine","type":"related"}],"termid":"MONDO:0025489","xrefs":{"Monarch":{"xref_id":"0025489"}}}


id: FYPO:0003303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the post-anaphase array of microtubules is present in an abnormal location.","definition_xrefs":["PomBase:mah","PMID:9348288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal post-anaphase array","termid":"FYPO:0004316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002399","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized post-anaphase array","synonyms":[{"name":"mislocalised post-anaphase array","type":"exact"},{"name":"mislocalized PAA","type":"exact"},{"name":"mislocalized post-anaphase array during mitotic cell cycle","type":"related"},{"name":"mislocalized post-anaphase array during vegetative growth","type":"exact"},{"name":"mislocalized post-anaphase microtubule array","type":"exact"}],"termid":"FYPO:0003303"}


id: PBO:0073627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 11","termid":"PBO:0073627"}


id: PBO:0084520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of Hsp110 subclass of the heat shock protein 70 (HSP70) family; serves as nucleotide exchange factor to load ATP onto the SSA class of cytosolic Hsp70s; may be involved in protein folding; localized to the cytoplasm; SSE2 has a paralog, SSE1, that arose from the whole genome duplication","termid":"PBO:0084520"}


id: FYPO:0007862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromeres and kinetochores remain associated with the spindle pole body during nuclear division in a that does not form a mitotic spindle or undergo cytokinesis.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:20967237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"part_of","term_name":"nuclear division in absence of mitotic spindle","termid":"FYPO:0007859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000337","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"centromere clustering at nuclear periphery during nuclear division in absence of mitotic spindle","synonyms":[{"name":"abnormal centromere-SPB association at mitosis","type":"related"},{"name":"centromere clustering at nuclear periphery during nuclear division in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"centromere clustering at nuclear periphery during nuclear division in absence of mitotic spindle during vegetative growth","type":"exact"},{"name":"centromere clustering at nuclear periphery during nuclear fission","type":"exact"},{"name":"chromosome SPB attachment during nuclear fission","type":"exact"}],"termid":"FYPO:0007862"}


id: MONDO:0005801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infectious disease that results in increased proliferation of affected CD4 lymphocytes, has material basis in Human T-lymphotropic virus 1, which is transmitted by sexual contact, transmitted by contaminated needles used by intravenous-drug users, and transmitted by breast feeding. The person infected with HTLV-1 eventually develop an often rapidly fatal leukemia, while others will develop a debilitative myelopathy, uveitis, infectious dermatitis, or another inflammatory disorder.","definition_xrefs":["EFO:0007316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human T-lymphotropic virus 1 infectious disease","secondary_identifiers":["UMLS:C0020097","MEDGEN:6919","MESH:D015490"],"synonyms":[{"name":"HTLV-1","type":"related"},{"name":"Human T lymphotropic virus type 1","type":"related"},{"name":"Human T-lymphotropic virus 1 caused disease or disorder","type":"exact"},{"name":"Human T-lymphotropic virus 1 disease or disorder","type":"exact"},{"name":"Human T-lymphotropic virus 1 infectious disease","type":"exact"},{"name":"human T-lymphotropic virus 1 infectious disease","type":"exact"}],"termid":"MONDO:0005801","xrefs":{"Monarch":{"xref_id":"0005801"}}}


id: GO:0043772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl phosphate + sn-glycerol 3-phosphate = 1-acyl-sn-glycerol 3-phosphate + orthophosphate.","definition_xrefs":["PMID:17308305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"acyl-phosphate glycerol-3-phosphate acyltransferase activity","synonyms":[{"name":"acyl-phosphate:glycerol-3-phosphate acyltransferase activity","type":"exact"},{"name":"acylphosphate glycerol-3-phosphate acyltransferase activity","type":"exact"},{"name":"acylphosphate:glycerol-3-phosphate acyltransferase activity","type":"exact"}],"termid":"GO:0043772"}


id: GO:0140964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of auxin within a cell.","definition_xrefs":["PMID:19506555","PMID:22314799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular auxin homeostasis","synonyms":[{"name":"auxin homeostasis","type":"broad"},{"name":"cellular auxin homeostasis","type":"exact"}],"termid":"GO:0140964"}


id: MONDO:1011252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratitis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis, non-human animal","termid":"MONDO:1010330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratitis, dog","secondary_identifiers":["OMIA:001287-9615"],"termid":"MONDO:1011252","xrefs":{"Monarch":{"xref_id":"1011252"}}}


id: PR:Q96WU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCPB16A4.06c gene.","definition_xrefs":["UniProtKB:Q96WU9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB16A4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB16A4.06c","synonyms":[{"name":"Spom972h-SPCPB16A4.06c","type":"exact"}],"termid":"PR:Q96WU9"}


id: PBO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Rieske ISP assembly ATPase (predicted)","termid":"PBO:0001673"}


id: MONDO:0004947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of lymphoblasts committed to the B-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called B acute lymphoblastic leukemia. When it involves nodal or extranodal sites, it is called B lymphoblastic lymphoma. (WHO, 2001)","definition_xrefs":["NCIT:C8936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-cell acute lymphoblastic leukemia","secondary_identifiers":["MEDGEN:226949","DOID:7061","DOID:0080630","SCTID:277571004","EFO:0000094","UMLS:C1292769"],"synonyms":[{"name":"B lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor B lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor B lymphoblastic lymphoma/leukemia","type":"related"},{"name":"precursor B-lymphoblastic lymphoma/leukemia","type":"exact"}],"termid":"MONDO:0004947","xrefs":{"Monarch":{"xref_id":"0004947"}}}


id: PBO:0082817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved mitochondrial protein of unknown function; processed by both mitochondrial processing peptidase and mitochondrial octapeptidyl aminopeptidase; gene contains the nested antisense gene NAG1","termid":"PBO:0082817"}


id: PBO:0043358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claspin","termid":"PBO:0043358"}


id: GO:0004456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-D-gluconate = 2-dehydro-3-deoxy-6-phospho-D-gluconate + H2O.","definition_xrefs":["RHEA:17277","EC:4.2.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphogluconate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02036","MetaCyc:PGLUCONDEHYDRAT-RXN"],"synonyms":[{"name":"6-phospho-D-gluconate hydro-lyase (2-dehydro-3-deoxy-6-phospho-D-gluconate-forming)","type":"related"},{"name":"6-phospho-D-gluconate hydro-lyase activity","type":"related"},{"name":"6-phosphogluconate dehydrase activity","type":"related"},{"name":"6-phosphogluconate dehydratase activity","type":"related"},{"name":"6-phosphogluconic dehydrase activity","type":"related"},{"name":"gluconate 6-phosphate dehydratase activity","type":"related"},{"name":"gluconate-6-phosphate dehydratase activity","type":"related"}],"termid":"GO:0004456"}


id: PBO:0032735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu43","termid":"PBO:0032735"}


id: PBO:0054314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1706","termid":"PBO:0054314"}


id: PBO:0073469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFXN4 pseudogene 1","termid":"PBO:0073469"}


id: PBO:0084996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Na+/H+ and K+/H+ exchanger; required for intracellular sequestration of Na+ and K+; located in the vacuole and late endosome compartments; required for osmotolerance to acute hypertonic shock and for vacuolar fusion; ortholog of human NHE9, which is linked to autism","termid":"PBO:0084996"}


id: MONDO:0020679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hearing loss caused by impaired transmission of signals from the external auditory canal or middle ear to the cochlea.","definition_xrefs":["NCIT:C27645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conductive hearing loss disorder","secondary_identifiers":["MEDGEN:9163","SCTID:44057004","UMLS:C0018777"],"synonyms":[{"name":"conductive deafness","type":"exact"},{"name":"conductive hearing loss","type":"exact"}],"termid":"MONDO:0020679","xrefs":{"Monarch":{"xref_id":"0020679"}}}


id: PBO:0057439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 556","termid":"PBO:0057439"}


id: PR:O14193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug69 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 69 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.05","synonyms":[{"name":"Spom972h-mug69","type":"exact"}],"termid":"PR:O14193"}


id: MONDO:0003181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare usually indolent lung carcinoma characterized by a cribiform and tubular pattern and the presence of glandular epithelial cells. Clinical symptoms include shortness of breath, cough, wheeze, hemopytsis and chest pain.","definition_xrefs":["NCIT:C5666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung adenoid cystic carcinoma","secondary_identifiers":["UMLS:C1334439","DOID:4872","ONCOTREE:LUACC","SCTID:707466008","ICD9:162.9","MEDGEN:232709"],"synonyms":[{"name":"LUACC","type":"related"},{"name":"adenocystic carcinoma of lung","type":"exact"},{"name":"adenocystic carcinoma of the lung","type":"exact"},{"name":"adenoid cystic carcinoma of lung","type":"exact"},{"name":"adenoid cystic carcinoma of the lung","type":"exact"},{"name":"lung adenocystic carcinoma","type":"exact"},{"name":"lung adenoid cystic cancer","type":"exact"},{"name":"lung adenoid cystic carcinoma","type":"exact"},{"name":"pulmonary adenocystic carcinoma","type":"exact"},{"name":"pulmonary adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0003181","xrefs":{"Monarch":{"xref_id":"0003181"}}}


id: PBO:0029643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_low_osmolarity","termid":"PBO:0029643"}


id: PBO:0060492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nanos C2HC-type zinc finger 3","termid":"PBO:0060492"}


id: MONDO:0006129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central nervous system lymphoma (obsolete MONDO:0006129)","termid":"MONDO:0006129","xrefs":{"Monarch":{"xref_id":"0006129"}}}


id: PBO:0076352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 16","termid":"PBO:0076352"}


id: GO:0061162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of monopolar intracellular organization or cell growth patterns. Monopolar cell organization is directional organization along an axis.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"is_a","term_name":"establishment or maintenance of monopolar cell polarity","termid":"GO:0061339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of monopolar cell polarity","termid":"GO:0061162"}


id: PBO:0027890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_attachment_of_mitotic_spindle_microtubules_to_kinetochore","termid":"PBO:0027890"}


id: PR:O94650
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-like protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13042:SF0","OMA:SCHPO02376","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like modifier hub1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.03","secondary_identifiers":["UniProtKB:O94650"],"synonyms":[{"name":"Spom972h-UBL5","type":"exact"}],"termid":"PR:O94650"}


id: MONDO:0015084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"FRAXF syndrome was originally identified in a family with developmental delay and an expanded CCG repeat at the folate-sensitive FRAXF fragile site. Since this initial description, FRAXF has been associated with a range of manifestations but no clear phenotype has been established.","definition_xrefs":["Orphanet:100974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAXF syndrome","secondary_identifiers":["SCTID:716708005","UMLS:C4274329","GARD:19769","MEDGEN:897295"],"termid":"MONDO:0015084","xrefs":{"Monarch":{"xref_id":"0015084"}}}


id: GO:0042080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI/GSI anchor biosynthetic process (obsolete GO:0042080)","synonyms":[{"name":"GPI/GSI anchor anabolism","type":"exact"},{"name":"GPI/GSI anchor biosynthesis","type":"exact"},{"name":"GPI/GSI anchor biosynthetic process","type":"exact"},{"name":"GPI/GSI anchor formation","type":"exact"},{"name":"GPI/GSI anchor synthesis","type":"exact"}],"termid":"GO:0042080"}


id: PBO:0078591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 4, Y-linked","termid":"PBO:0078591"}


id: GO:0050171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a phenol = UDP + an aryl beta-D-glucoside.","definition_xrefs":["MetaCyc:PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN","EC:2.4.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"phenol beta-glucosyltransferase activity","synonyms":[{"name":"UDP glucosyltransferase activity","type":"related"},{"name":"UDP-glucose glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:phenol beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:phenol beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucosyltransferase activity","type":"related"},{"name":"phenol b-glucosyltransferase activity","type":"exact"},{"name":"phenol-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucosyltransferase activity","type":"related"}],"termid":"GO:0050171"}


id: MONDO:0019262
data:
  {"annotated_genes":["SJAG_02716"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"}]},"cv_name":"mondo","definition":"A genetically heterogeneous group of neuronal ceroid lipofuscinoses (NCLs) typically characterized by onset at early school age with vision loss due to retinopathy, seizures and the decline of mental and motor capacities.","definition_xrefs":["Orphanet:79264"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis","termid":"MONDO:0016295"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02716":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002525","MONDO:0002561","MONDO:0005066","MONDO:0002039"],"is_obsolete":false,"name":"juvenile neuronal ceroid lipofuscinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2201243","GARD:4938","DOID:0050756","icd11.foundation:1716107919","NANDO:1200154","MedDRA:10052073","SCTID:61663001"],"synonyms":[{"name":"JNCL","type":"exact"},{"name":"Spielmeyer-Vogt disease","type":"exact"},{"name":"batten disease","type":"exact"},{"name":"juvenile NCL","type":"exact"},{"name":"juvenile neuronal ceroid lipofuscinosis","type":"exact"}],"termid":"MONDO:0019262","terms_by_termid":{"MONDO:0008767":null},"xrefs":{"Monarch":{"xref_id":"0019262"}}}


id: GO:0099171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, acting in the presynapse that results in modulation of chemical synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"}


id: MONDO:0005705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the biliary passages with clonorchis sinensis, also called Opisthorchis sinensis. It may lead to inflammation of the biliary tract, proliferation of biliary epithelium, progressive portal fibrosis, and sometimes bile duct carcinoma. Extension to the liver may lead to fatty changes and cirrhosis. (From Dorland, 27th ed)","definition_xrefs":["MESH:D003003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clonorchiasis","secondary_identifiers":["icd11.foundation:918986134","DOID:13767","ICD10CM:B66.1","Orphanet:658917","UMLS:C0009021","ICD9:121.1","MEDGEN:3119","EFO:0007210","SCTID:11938002"],"synonyms":[{"name":"Oriental liver fluke disease","type":"exact"}],"termid":"MONDO:0005705","xrefs":{"Monarch":{"xref_id":"0005705"}}}


id: PBO:0062873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 7B","termid":"PBO:0062873"}


id: PBO:0072133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 10","termid":"PBO:0072133"}


id: PBO:0002394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Sds3","termid":"PBO:0002394"}


id: GO:1902561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an origin recognition complex.","definition_xrefs":["PMID:11717425","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"origin recognition complex assembly","synonyms":[{"name":"ORC assembly","type":"exact"},{"name":"ORC formation","type":"exact"},{"name":"origin of replication recognition complex assembly","type":"exact"},{"name":"origin of replication recognition complex formation","type":"exact"},{"name":"origin recognition complex formation","type":"exact"}],"termid":"GO:1902561"}


id: PBO:0056118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 4","termid":"PBO:0056118"}


id: GO:0046937
data:
  {"annotated_genes":["SJAG_02599","SJAG_04516","SJAG_01351","SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110373,95152,72591,98888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046938"},{"annotations":[98889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090423"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytochelatins, any of a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes. The structure is of the type (gamma-glutamyl-cysteinyl)n-glycine, where n is 2 to 11.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"primary metabolic process","termid":"GO:0044238"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phytochelatin metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cadystin metabolic process","type":"related"},{"name":"cadystin metabolism","type":"related"},{"name":"phytochelatin metabolism","type":"exact"}],"termid":"GO:0046937","terms_by_termid":{"GO:0046938":null,"GO:0090423":null}}


id: MONDO:0017467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tibio-fibular synostosis is a rare, non-syndromic limb malformation characterized by fusion of the proximal or distal tibial and fibular metaphysis and/or diaphysis, frequently associated with distal positioning of the proximal tibiofibular joint, leg length discrepancy, bowing of the fibula, and valgus deformity of the knee.","definition_xrefs":["Orphanet:295028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibio-fibular synostosis","secondary_identifiers":["SCTID:737581000","UMLS:C4545230","GARD:21208","icd11.foundation:1756900121","MEDGEN:1616659"],"synonyms":[{"name":"Tibio-fibular fusion","type":"exact"}],"termid":"MONDO:0017467","xrefs":{"Monarch":{"xref_id":"0017467"}}}


id: PBO:0003865
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eleven-nineteen Lysine rich in Leukemia","termid":"PBO:0003865"}


id: GO:0046631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an alpha-beta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell activation","synonyms":[{"name":"alpha-beta T lymphocyte activation","type":"exact"},{"name":"alpha-beta T-cell activation","type":"exact"},{"name":"alpha-beta T-lymphocyte activation","type":"exact"}],"termid":"GO:0046631"}


id: MONDO:0009125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dopamine beta-hydroxylase, plasma, thermolability of (obsolete MONDO:0009125)","secondary_identifiers":["OMIM:223380"],"synonyms":[{"name":"dopamine beta-hydroxylase, plasma, thermolability of","type":"exact"}],"termid":"MONDO:0009125","xrefs":{"Monarch":{"xref_id":"0009125"}}}


id: GO:0016482
data:
  {"annotated_genes":["SJAG_04112","SJAG_04275","SJAG_02177","SJAG_02193","SJAG_00143","SJAG_04023","SJAG_04219","SJAG_02282","SJAG_00971","SJAG_04609","SJAG_04902","SJAG_04629","SJAG_00379","SJAG_02277","SJAG_04822","SJAG_04359","SJAG_00632","SJAG_04552","SJAG_04565","SJAG_06588","SJAG_00287","SJAG_05030","SJAG_04966","SJAG_01039","SJAG_03963","SJAG_02823","SJAG_01645","SJAG_01598","SJAG_02912","SJAG_02852","SJAG_03005","SJAG_03504","SJAG_01809","SJAG_02750","SJAG_01027","SJAG_00314","SJAG_00380","SJAG_02811","SJAG_01448","SJAG_03756","SJAG_02240","SJAG_01488","SJAG_04338"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117203,73251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034498"},{"annotations":[79514,90973,103011,114974,118958,120440,78631,81570,75278,101796,102140,62201,79488,102198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006895"},{"annotations":[82104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034499"},{"annotations":[73291,63412,77878,114976,79290,72757,77744,114757,94127,64986,99622,79108,120511,81423,72234,99017,104564,103023,107450,104029,71691,73334,80483,73702,96807,81807,77558,79037,100561,120899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042147"}]},"cv_name":"biological_process","definition":"The directed movement of substances or organelles within the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00287":null,"SJAG_00314":null,"SJAG_00379":null,"SJAG_00380":null,"SJAG_00632":null,"SJAG_00971":null,"SJAG_01027":null,"SJAG_01039":null,"SJAG_01448":null,"SJAG_01488":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02193":null,"SJAG_02240":null,"SJAG_02277":null,"SJAG_02282":null,"SJAG_02750":null,"SJAG_02811":null,"SJAG_02823":null,"SJAG_02852":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03504":null,"SJAG_03756":null,"SJAG_03963":null,"SJAG_04023":null,"SJAG_04112":null,"SJAG_04219":null,"SJAG_04275":null,"SJAG_04338":null,"SJAG_04359":null,"SJAG_04552":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04629":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_04966":null,"SJAG_05030":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cytosolic transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016482","terms_by_termid":{"GO:0006895":null,"GO:0034498":null,"GO:0034499":null,"GO:0042147":null}}


id: PBO:0030203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_multinucleate_vegetative_cell","termid":"PBO:0030203"}


id: PR:O59831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cationic amino acid transporter 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05021","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C965.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.11c","secondary_identifiers":["UniProtKB:O59831"],"synonyms":[{"name":"Spom972h-SLC7A2","type":"exact"}],"termid":"PR:O59831"}


id: PBO:0084419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major exo-1,3-beta-glucanase of the cell wall; involved in cell wall beta-glucan assembly; exists as three differentially glycosylated isoenzymes; EXG1 has a paralog, SPR1, that arose from the whole genome duplication","termid":"PBO:0084419"}


id: PBO:0064441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich nuclear receptor coactivator 2 pseudogene 1","termid":"PBO:0064441"}


id: PBO:0065840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 5","termid":"PBO:0065840"}


id: PATO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to varying or changing.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability","synonyms":[{"name":"variability of a physical quality","type":"related"}],"termid":"PATO:0001303"}


id: MONDO:0700007
data:
  {"annotated_genes":["SJAG_03361","SJAG_00933","SJAG_03182","SJAG_04148","SJAG_00487","SJAG_04491","SJAG_04000","SJAG_04621","SJAG_05979","SJAG_01185","SJAG_00640","SJAG_00233","SJAG_00093"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014628"},{"annotations":[88110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[86913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[87136,89095,87135,89096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012197"},{"annotations":[86882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[87717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[87642,87641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[87640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[86830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[87646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"A disease or disorder for which the cause is of uncertain or unknown.","definition_xrefs":["MONDO:patterns/idiopathic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00233":null,"SJAG_00487":null,"SJAG_00640":null,"SJAG_00933":null,"SJAG_01185":null,"SJAG_03182":null,"SJAG_03361":null,"SJAG_04000":null,"SJAG_04148":null,"SJAG_04491":null,"SJAG_04621":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"idiopathic disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:548250","UMLS:C0277553"],"synonyms":[{"name":"idiopathic disorder","type":"exact"}],"termid":"MONDO:0700007","terms_by_termid":{"MONDO:0011303":null,"MONDO:0012197":null,"MONDO:0013836":null,"MONDO:0014099":null,"MONDO:0014257":null,"MONDO:0014628":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null,"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0700007"}}}


id: PBO:0051975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IZUMO family member 2","termid":"PBO:0051975"}


id: PBO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine-phosphate cytidylyltransferase (predicted)","termid":"PBO:0002198"}


id: PBO:0064202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta associated 9","termid":"PBO:0064202"}


id: GO:0003801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete blood coagulation factor activity (obsolete GO:0003801)","synonyms":[{"name":"blood coagulation factor activity","type":"exact"}],"termid":"GO:0003801"}


id: GO:0008085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete phototransduction, visible light, light adaptation (obsolete GO:0008085)","synonyms":[{"name":"phototransduction, visible light, light adaptation","type":"exact"}],"termid":"GO:0008085"}


id: PBO:0116990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALM antisense RNA 1","termid":"PBO:0116990"}


id: PBO:0077348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 88","termid":"PBO:0077348"}


id: MOD:00866
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to one of several dihydroxylated proline residues, such as (2S,3R,4R)-3,4-dihydroxyproline or (2S,3R,4S)-3,4-dihydroxyproline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated proline","termid":"MOD:00678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxylated proline","synonyms":[{"name":"Hy2Pro","type":"exact"}],"termid":"MOD:00866"}


id: PBO:0084026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase; highly conserved enzyme that catalyzes the second step in the biosynthesis of GMP from inosine 5'-phosphate (IMP); transcription is not subject to regulation by guanine but is negatively regulated by nutrient starvation; reduction-of-function mutation gua1-G388D causes changes in cellular guanine nucleotide pools, defects in general protein synthesis, and impaired translation of GCN4 mRNA","termid":"PBO:0084026"}


id: MONDO:0012678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 5","secondary_identifiers":["OMIM:611494","UMLS:C1969099","GARD:15517","MEDGEN:369411","MESH:C566932"],"synonyms":[{"name":"ATFB5","type":"exact"},{"name":"atrial fibrillation, familial, 5","type":"exact"}],"termid":"MONDO:0012678","xrefs":{"Monarch":{"xref_id":"0012678"}}}


id: GO:0072157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to distal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in nephron tubule morphogenesis","termid":"GO:0072155"},{"relation_name":"part_of","term_name":"distal tubule morphogenesis","termid":"GO:0072156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in distal tubule morphogenesis","termid":"GO:0072157"}


id: MONDO:0025113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of birds which are raised as a source of meat or eggs for human consumption and are usually found in barnyards, hatcheries, etc. The concept is differentiated from bird diseases which is for diseases of birds not considered poultry and usually found in zoos, parks, and the wild.","definition_xrefs":["MESH:D011201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poultry disease","synonyms":[{"name":"disease, poultry","type":"related"},{"name":"diseases, poultry","type":"related"},{"name":"poultry disease","type":"exact"}],"termid":"MONDO:0025113","xrefs":{"Monarch":{"xref_id":"0025113"}}}


id: GO:0010130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ethylbenzene, a benzene derivative with an ethyl group attached to the ring, which occurs in the absence of oxygen.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylbenzene catabolic process","termid":"GO:0018915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic ethylbenzene catabolic process","secondary_identifiers":["MetaCyc:PWY-481","UM-BBD_pathwayID:ethb"],"synonyms":[{"name":"anaerobic ethylbenzene breakdown","type":"exact"},{"name":"anaerobic ethylbenzene catabolism","type":"exact"},{"name":"anaerobic ethylbenzene degradation","type":"exact"}],"termid":"GO:0010130"}


id: MONDO:0013336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"19p13.13 microdeletion syndrome is a rare partial autosomal monosomy characterized by global developmental delay, moderate intellectual disability, macrocephaly, overgrowth, hypotonia, and facial dysmorphism (frontal bossing, down-slanting palpebral fissures). Other associated features variably include ataxia, seizures, ventriculomegaly, ocular abnormalities (strabismus, optic nerve hypoplasia) and gastrointestinal problems (abdominal pain, vomiting, constipation).","definition_xrefs":["Orphanet:357001"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 19","termid":"MONDO:0016897"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19p13.13 deletion syndrome","secondary_identifiers":["OMIM:613638","GARD:17542","DOID:0060426","MEDGEN:462244","SCTID:764440006","UMLS:C3150894"],"synonyms":[{"name":"19p13.13 microdeletion syndrome","type":"related"},{"name":"Del(19)(p13.13)","type":"exact"},{"name":"chromosome 19P13.13 Duplication syndrome","type":"related"},{"name":"chromosome 19p13.13 deletion syndrome","type":"exact"},{"name":"monosomy 19p13.13","type":"exact"}],"termid":"MONDO:0013336","xrefs":{"Monarch":{"xref_id":"0013336"}}}


id: PBO:0081872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 814","termid":"PBO:0081872"}


id: GO:0035627
data:
  {"annotated_genes":["SJAG_04413","SJAG_03690","SJAG_01116","SJAG_01437","SJAG_00176","SJAG_00355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75058,119504,75959,111571,75494,74517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"}]},"cv_name":"biological_process","definition":"The directed movement of ceramides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ceramides are a class of lipid composed of sphingosine linked to a fatty acid.","definition_xrefs":["GOC:bf","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00355":null,"SJAG_01116":null,"SJAG_01437":null,"SJAG_03690":null,"SJAG_04413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"ceramide transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9845576"],"termid":"GO:0035627","terms_by_termid":{"GO:0035621":null}}


id: MONDO:0010060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infantile-onset spinocerebellar ataxia (IOSCA) is a hereditary neurological disorder with early and severe involvement of both the peripheral and central nervous systems. It has only been described in Finnish families.","definition_xrefs":["Orphanet:1186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive degenerative and progressive cerebellar ataxia","termid":"MONDO:0020046"},{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome, hepatocerebral form","termid":"MONDO:0100512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005559","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 7 (hepatocerebral type)","secondary_identifiers":["UMLS:C1849096","DOID:0050556","DOID:0080126","GARD:4062","MEDGEN:338613","MESH:C535523","OMIM:271245","SCTID:724227000"],"synonyms":[{"name":"IOSCA","type":"exact"},{"name":"MTDPS7","type":"related"},{"name":"OHAHA syndrome","type":"exact"},{"name":"Ohaha syndrome","type":"exact"},{"name":"SCA8 (formerly)","type":"related"},{"name":"TWNK autosomal recessive degenerative and progressive cerebellar ataxia","type":"exact"},{"name":"autosomal recessive degenerative and progressive cerebellar ataxia caused by mutation in TWNK","type":"exact"},{"name":"infantile onset spinocerebellar ataxia","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 7","type":"related"},{"name":"mitochondrial DNA depletion syndrome 7 (hepatocerebral type)","type":"exact"},{"name":"mitochondrial DNA depletion syndrome type 7","type":"exact"},{"name":"ophthalmoplegia - hypotonia - ataxia - hypoacusis - athetosis","type":"related"},{"name":"ophthalmoplegia, hypotonia, ataxia, hypacusis, and athetosis","type":"related"},{"name":"ophthalmoplegia, hypotonia, ataxia, hypoacusis, and athetosis","type":"related"},{"name":"ophthalmoplegia-hypotonia-ataxia-hypoacusis-athetosis syndrome","type":"exact"},{"name":"spinocerebellar ataxia 8","type":"related"},{"name":"spinocerebellar ataxia 8 (formerly)","type":"related"},{"name":"spinocerebellar ataxia 8, formerly","type":"related"},{"name":"spinocerebellar ataxia infantile with sensory neuropathy","type":"related"},{"name":"spinocerebellar ataxia, infantile, with sensory neuropathy","type":"related"},{"name":"spinocerebellar ataxia, infantile-onset","type":"related"}],"termid":"MONDO:0010060","xrefs":{"Monarch":{"xref_id":"0010060"}}}


id: PBO:0003859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk32 (predicted)","termid":"PBO:0003859"}


id: FYPO:0000772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which perforations or gaps (other than nuclear pores) are present in the nuclear envelope.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002403"],"is_obsolete":false,"name":"perforated nuclear envelope","synonyms":[{"name":"disrupted nuclear envelope","type":"related"},{"name":"disrupted nuclear membrane","type":"related"},{"name":"gapped nuclear envelope","type":"exact"},{"name":"perforated nuclear envelope during mitotic cell cycle","type":"related"},{"name":"perforated nuclear envelope during vegetative growth","type":"exact"},{"name":"perforated nuclear membrane","type":"related"},{"name":"permeabilized nucleus during mitosis","type":"exact"}],"termid":"FYPO:0000772"}


id: PBO:0062087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 18 pseudogene","termid":"PBO:0062087"}


id: GO:0000104
data:
  {"annotated_genes":["SJAG_00260","SJAG_00203","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016156"},{"annotations":[67734,77774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor.","definition_xrefs":["RHEA:16357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00203":null,"SJAG_00260":null,"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"succinate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0019739","KEGG_REACTION:R00412"],"synonyms":[{"name":"fumarate dehydrogenase activity","type":"exact"},{"name":"fumarate reductase activity","type":"exact"},{"name":"fumaric hydrogenase activity","type":"related"},{"name":"succinate oxidoreductase activity","type":"exact"},{"name":"succinic acid dehydrogenase activity","type":"exact"},{"name":"succinic dehydrogenase activity","type":"broad"},{"name":"succinodehydrogenase activity","type":"exact"},{"name":"succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:0000104","terms_by_termid":{"GO:0008177":null,"GO:0016156":null}}


id: GO:0120281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid bilayer that surrounds an autolysosome, a single-membrane-bounded vesicle in which endogenous cellular material is degraded.","definition_xrefs":["PMID:32047650","GOC:nhn","PMID:24657946","GOC:krc","PMID:17182262","PMID:26382870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"part_of","term_name":"autolysosome","termid":"GO:0044754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"autolysosome membrane","termid":"GO:0120281"}


id: PBO:0013048
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA Break Localizing","termid":"PBO:0013048"}


id: GO:0071336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hair follicle cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"hair follicle cell proliferation","termid":"GO:0071335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hair follicle cell proliferation","termid":"GO:0071336"}


id: PR:Q9UT75
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA dimethylallyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00683","PANTHER:PTHR11088:SF21","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dimethylallyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.15","secondary_identifiers":["UniProtKB:Q9UT75"],"synonyms":[{"name":"IPP transferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IPPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IPTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TRIT1","type":"exact"},{"name":"isopentenyl-diphosphate: tRNA isopentenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA isopentenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT75"}


id: GO:0106118
data:
  {"annotated_genes":["SJAG_01307","SJAG_02044","SJAG_04018","SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[111803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[77258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[90379,107761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a sterol biosynthetic process.","definition_xrefs":["PMID:16459310","GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"regulates","term_name":"sterol biosynthetic process","termid":"GO:0016126"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of sterol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0106118","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PBO:0069288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 544, pseudogene","termid":"PBO:0069288"}


id: SO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with tungsten ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_tungsten_ion_contact_site","secondary_identifiers":["BS:00143"],"synonyms":[{"name":"W_contact_site","type":"exact"},{"name":"polypeptide tungsten ion contact site","type":"exact"}],"termid":"SO:0001102"}


id: PR:C6Y4A2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4A2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4G9.22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.22","synonyms":[{"name":"Spom972h-SPAC4G9.22","type":"exact"}],"termid":"PR:C6Y4A2"}


id: PBO:0078147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 26-1","termid":"PBO:0078147"}


id: PBO:0005504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine beta-lyase (predicted)","termid":"PBO:0005504"}


id: GO:0106084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of interacting with the spindle pole body and the nuclear envelope, in order to embed the spindle pole body in the nuclear envelope at fusion sites of the inner and outer nuclear membrane.","definition_xrefs":["GOC:lnp","PMID:28356353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane microtubule tethering complex","termid":"GO:0106094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mitotic nuclear membrane microtubule tethering complex","synonyms":[{"name":"Mps2-Bbp1-Spc29 complex","type":"related"},{"name":"nuclear membrane mitotic spindle pole body tethering complex","type":"exact"}],"termid":"GO:0106084"}


id: GO:0051698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-saccharopine + O2 = (S)-2-amino-6-oxohexanoate + H2O2 + L-glutamate.","definition_xrefs":["PMID:16233628","RHEA:28210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"saccharopine oxidase activity","secondary_identifiers":["EC:1.5.3.18"],"synonyms":[{"name":"SAX activity","type":"broad"}],"termid":"GO:0051698"}


id: PBO:0053031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal protein transmembrane 4 beta pseudogene 2","termid":"PBO:0053031"}


id: PBO:0017610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, human PPP1R16A ortholog","termid":"PBO:0017610"}


id: PATO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of not being clearly visible.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conspicuousness","termid":"PATO:0001998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inconspicuous","synonyms":[{"name":"faint","type":"related"}],"termid":"PATO:0000464"}


id: MONDO:0700011
data:
  {"annotated_genes":["SJAG_01806"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 4 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01806":null},"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700011","terms_by_termid":{"MONDO:0008684":null},"xrefs":{"Monarch":{"xref_id":"0700011"}}}


id: PBO:0108895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 8","termid":"PBO:0108895"}


id: PBO:0017707
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CDC43","termid":"PBO:0017707"}


id: PBO:0071734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 32","termid":"PBO:0071734"}


id: PBO:0028579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut","termid":"PBO:0028579"}


id: GO:0043962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont adenylate cyclase-mediated signal transduction (obsolete GO:0043962)","termid":"GO:0043962"}


id: PBO:0038697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 9","termid":"PBO:0038697"}


id: GO:0033415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UGA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0060090","GO:0003723"],"is_obsolete":false,"name":"UGA codon-amino acid adaptor activity","synonyms":[{"name":"TGA codon-amino acid adaptor activity","type":"exact"}],"termid":"GO:0033415"}


id: GO:1904700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a granulosa cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000085","PMID:19208546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell apoptotic process","synonyms":[{"name":"granulosa cell apoptosis","type":"narrow"},{"name":"granulosa cell of ovary apoptosis","type":"narrow"},{"name":"granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904700"}


id: PBO:0059931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 17","termid":"PBO:0059931"}


id: MONDO:0006206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the fallopian tube.","direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube cancer","termid":"MONDO:0002158"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube carcinoma","secondary_identifiers":["DOID:1963","NCIT:C3867","EFO:1000251","SCTID:276870001","MEDGEN:66762","UMLS:C0238122"],"synonyms":[{"name":"cancer of fallopian tube","type":"broad"},{"name":"cancer of the fallopian tube","type":"broad"},{"name":"carcinoma of fallopian tube","type":"exact"},{"name":"carcinoma of the fallopian tube","type":"exact"},{"name":"fallopian tube Ca","type":"exact"},{"name":"fallopian tube cancer","type":"broad"},{"name":"fallopian tube carcinoma","type":"exact"}],"termid":"MONDO:0006206","xrefs":{"Monarch":{"xref_id":"0006206"}}}


id: PBO:0024807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to","termid":"PBO:0024807"}


id: GO:0018724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-phenanthrol + X-SO3(-) = HX + 4-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-phenanthrol sulfotransferase activity (obsolete GO:0018724)","synonyms":[{"name":"4-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018724"}


id: PBO:0044738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 6","termid":"PBO:0044738"}


id: PBO:0047188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 204 member D, pseudogene","termid":"PBO:0047188"}


id: PBO:0085370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphotyrosine-specific protein phosphatase; dephosphorylates a broad range of substrates in vivo, including Fpr3p; localized to the cytoplasm and the mitochondria; proposed to be a negative regulator of filamentation","termid":"PBO:0085370"}


id: GO:0045758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin polymerization and/or depolymerization (obsolete GO:0045758)","synonyms":[{"name":"positive regulation of actin polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045758"}


id: SO:0000584
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tmRNA liberates a mRNA from a stalled ribosome. To accomplish this part of the tmRNA is used as a reading frame that ends in a translation stop signal. The broken mRNA is replaced in the ribosome by the tmRNA and translation of the tmRNA leads to addition of a proteolysis tag to the incomplete protein enabling recognition by a protease. Recently a number of permuted tmRNAs genes have been found encoded in two parts. TmRNAs have been identified in eubacteria and some chloroplasts but are absent from archeal and Eukaryote nuclear genomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/TmRNA"],"synonyms":[{"name":"10Sa RNA","type":"related"},{"name":"INSDC_feature:tmRNA","type":"exact"},{"name":"ssrA","type":"related"}],"termid":"SO:0000584"}


id: GO:0102835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-16:0-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:0-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-16:0-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102835)","termid":"GO:0102835"}


id: PATO:0001942
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown and green hues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brown green","synonyms":[{"name":"olive green","type":"exact"}],"termid":"PATO:0001942"}


id: PBO:0070415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 1","termid":"PBO:0070415"}


id: PBO:0054102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1461","termid":"PBO:0054102"}


id: PATO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000785 muscle function value (obsolete PATO:0000785)","termid":"PATO:0000785"}


id: PBO:0051166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-49","termid":"PBO:0051166"}


id: PBO:0069445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 710, pseudogene","termid":"PBO:0069445"}


id: PBO:0076550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 2 pseudogene 2","termid":"PBO:0076550"}


id: GO:0008662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose 1-phosphate = ADP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1-phosphofructokinase activity","secondary_identifiers":["MetaCyc:1PFRUCTPHOSN-RXN","RHEA:14213"],"synonyms":[{"name":"1-phosphofructokinase (phosphorylating)","type":"related"},{"name":"ATP:D-fructose-phosphate 6-phosphotransferase activity","type":"related"},{"name":"D-fructose-1-phosphate kinase activity","type":"related"},{"name":"fructose 1-phosphate kinase activity","type":"related"},{"name":"fructose-1-phosphate kinase activity","type":"related"},{"name":"phosphofructokinase 1","type":"related"}],"termid":"GO:0008662"}


id: FYPO:0005882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of gamma-glutamyl-2-aminobutyrate (also called gamma-Glu-Abu) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular gamma-glutamyl-2-aminobutyrate level","synonyms":[{"name":"increased cellular gamma-Glu-Abu level","type":"related"},{"name":"increased cellular gamma-Glu-Abu(1-) level","type":"exact"},{"name":"increased cellular gamma-glutamyl-2-aminobutyrate level during mitotic cell cycle","type":"related"},{"name":"increased cellular gamma-glutamyl-2-aminobutyrate level during vegetative growth","type":"exact"},{"name":"increased gamma-glutamyl-2-aminobutyrate accumulation","type":"related"}],"termid":"FYPO:0005882"}


id: PR:Q9US57
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1002.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1002.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","synonyms":[{"name":"Spom972h-SPAC1002.01","type":"exact"}],"termid":"PR:Q9US57"}


