# terms

id: PBO:0058309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4682","termid":"PBO:0058309"}


id: PBO:0090891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex subunit Red1","termid":"PBO:0090891"}


id: GO:0090295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:mah","GOC:rb","PMID:19104072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"catabolite repression","termid":"GO:0061984"},{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription","termid":"GO:0090293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"nitrogen catabolite repression of transcription","synonyms":[{"name":"negative regulation of transcription by nitrogen catabolites","type":"exact"},{"name":"nitrogen catabolite repression","type":"exact"}],"termid":"GO:0090295"}


id: GO:0019152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoin + NAD+ = diacetyl + NADH + H+. This reaction is catalyzed in the reverse direction.","definition_xrefs":["MetaCyc:ACETOINDEHYDROG-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetoin dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R02343"],"synonyms":[{"name":"diacetyl reductase activity","type":"exact"}],"termid":"GO:0019152"}


id: SO:1000092
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Any sequence variant effect that is known at nucleotide level but cannot be explained by using other key terms.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000092 sequence_variant_causing_complex_change_of_translational_product (obsolete SO:1000092)","synonyms":[{"name":"mutation causing complex change of translational product","type":"related"},{"name":"sequence variant causing complex change of translational product","type":"exact"}],"termid":"SO:1000092"}


id: GO:0030922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-(E)-2,3-didehydrotyrosine coupled with cyclization of neighboring residues.","definition_xrefs":["PMID:12623015","RESID:AA0365"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tyrosine dehydrogenation to form (E)-2,3-didehydrotyrosine (obsolete GO:0030922)","termid":"GO:0030922"}


id: GO:0036259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of raffinose that occur in the presence of oxygen.","definition_xrefs":["GOC:al","PMID:10082789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose catabolic process","termid":"GO:0034484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"aerobic raffinose catabolic process","synonyms":[{"name":"aerobic raffinose breakdown","type":"exact"},{"name":"aerobic raffinose catabolism","type":"exact"},{"name":"aerobic raffinose degradation","type":"exact"}],"termid":"GO:0036259"}


id: PATO:0002483
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Positional quality in which an entity is located outside of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external to","termid":"PATO:0002483"}


id: PBO:0029366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nuclear_periphery","termid":"PBO:0029366"}


id: FYPO:0000432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of fermentation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal fermentation","termid":"FYPO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased fermentation","synonyms":[{"name":"decreased fermentation during mitotic cell cycle","type":"related"},{"name":"decreased fermentation during vegetative growth","type":"exact"},{"name":"decreased fermentative metabolism","type":"exact"},{"name":"fermentative metabolism: decreased","type":"related"},{"name":"reduced fermentation","type":"exact"}],"termid":"FYPO:0000432"}


id: MONDO:0002654
data:
  {"annotated_genes":["SJAG_02748","SJAG_01156","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89075,86861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[88936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the uterine corpus or the cervix. Representative examples of non-neoplastic disorders include endometritis and cervicitis. Representative examples of neoplastic disorders include endometrial carcinoma, carcinosarcoma, and cervical carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01156":null,"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"is_obsolete":false,"name":"uterine disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:621.9","UMLS:C0042131","SCTID:12337004","NCIT:C26907","MESH:D014591","ICD9:621.8","DOID:345","MEDGEN:22590"],"synonyms":[{"name":"disease of uterus","type":"exact"},{"name":"disease or disorder of uterus","type":"exact"},{"name":"disorder of uterus","type":"exact"},{"name":"uterine disease","type":"exact"},{"name":"uterine disorder","type":"exact"},{"name":"uterus disease","type":"exact"},{"name":"uterus disease or disorder","type":"exact"}],"termid":"MONDO:0002654","terms_by_termid":{"MONDO:0011962":null,"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0002654"}}}


id: GO:0099018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont evades the DNA restriction modification system of its host. This process occurs in phages to protein themselves from bacterial restriction enzyme systems. Some viruses encode their own methyltransferase in order to protect their genome from host restriction enzymes. Others directly inhibit restriction enzymes while some use unusual bases in their genome to avoid restriction.","definition_xrefs":["PMID:23979432","VZ:3966","PMID:24123737","PMID:20348932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of host restriction-modification system","synonyms":[{"name":"evasion by virus of host restriction-modification system","type":"related"},{"name":"evasion of host restriction-modification system","type":"exact"},{"name":"restriction-modification system evasion by virus","type":"exact"}],"termid":"GO:0099018"}


id: MONDO:0975761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 126, susceptibility to","secondary_identifiers":["OMIM:620931"],"termid":"MONDO:0975761","xrefs":{"Monarch":{"xref_id":"0975761"}}}


id: GO:0045887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic assembly at neuromuscular junction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic assembly at neuromuscular junction","termid":"GO:0008582"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of synapse assembly","termid":"GO:0051965"},{"relation_name":"is_a","term_name":"positive regulation of neuromuscular junction development","termid":"GO:1904398"},{"relation_name":"positively_regulates","term_name":"synaptic assembly at neuromuscular junction","termid":"GO:0051124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic assembly at neuromuscular junction","synonyms":[{"name":"activation of synaptic growth at neuromuscular junction","type":"narrow"},{"name":"positive regulation of synaptic growth at neuromuscular junction","type":"related"},{"name":"stimulation of synaptic growth at neuromuscular junction","type":"narrow"},{"name":"up regulation of synaptic growth at neuromuscular junction","type":"exact"},{"name":"up-regulation of synaptic growth at neuromuscular junction","type":"exact"},{"name":"upregulation of synaptic growth at neuromuscular junction","type":"exact"}],"termid":"GO:0045887"}


id: MONDO:1010286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumothorax that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumothorax, non-human animal","secondary_identifiers":["OMIA:000804"],"termid":"MONDO:1010286","xrefs":{"Monarch":{"xref_id":"1010286"}}}


id: GO:0047384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + [hydroxymethylglutaryl-CoA reductase (NADPH)] phosphate = phosphate + [hydroxymethylglutaryl-CoA reductase (NADPH)].","definition_xrefs":["EC:3.1.3.47","MetaCyc:3.1.3.47-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0004721","GO:0003824","GO:0140096","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"[hydroxymethylglutaryl-CoA reductase (NADPH)]-phosphatase activity","synonyms":[{"name":"hydroxymethylglutaryl-CoA reductase (NADPH)-phosphatase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH)-phosphate phosphohydrolase activity","type":"related"},{"name":"reductase phosphatase activity","type":"broad"}],"termid":"GO:0047384"}


id: PBO:0084180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone; involved in regulation of chromatin structure in both transcribed and silenced chromosomal regions; affects transcriptional elongation; has a role in regulation of Ty1 transposition; interacts physically and functionally with Chromatin Assembly Factor-1 (CAF-1)","termid":"PBO:0084180"}


id: PBO:0015692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-60S shuttling factor Alb1 (predicted)","termid":"PBO:0015692"}


id: PBO:0034375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-does_not_overlap_sequence_of","termid":"PBO:0034375"}


id: PBO:0086960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of ribosomal protein (RP) transcription; has forkhead associated domain that binds phosphorylated proteins; recruits coactivator Ifh1p or corepressor Crf1p to RP gene promoters; also has forkhead DNA-binding domain though in vitro DNA binding assays give inconsistent results; computational analyses suggest it binds DNA directly at highly active RP genes and indirectly through Rap1p motifs at others; suppresses RNA pol III and splicing factor prp4 mutants","termid":"PBO:0086960"}


id: PBO:0055680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase I","termid":"PBO:0055680"}


id: PBO:0000753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein Rad4","termid":"PBO:0000753"}


id: GO:0015680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that contributes to the delivery of copper ions to a target protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein maturation by copper ion transfer (obsolete GO:0015680)","synonyms":[{"name":"intracellular copper delivery","type":"exact"},{"name":"intracellular copper ion delivery","type":"related"},{"name":"intracellular copper ion transport","type":"broad"}],"termid":"GO:0015680"}


id: GO:0009092
data:
  {"annotated_genes":["SJAG_02290","SJAG_03152","SJAG_00881","SJAG_00234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117767,72885,75359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[102560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving homoserine, alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00881":null,"SJAG_02290":null,"SJAG_03152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"homoserine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"homoserine metabolism","type":"exact"}],"termid":"GO:0009092","terms_by_termid":{"GO:0009090":null,"GO:0019280":null}}


id: MONDO:0002953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of basal cell carcinoma presenting as a pale, indurated plaque, usually in the upper trunk or face. Morphologically, it is characterized by the presence of strands, cords, and columns of basaloid cells infiltrating the dermis. Perineural invasion may be present and the basaloid cell infiltrate may extend into deeper tissues.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin infiltrative basal cell carcinoma","secondary_identifiers":["UMLS:C0334257","DOID:4299","ICDO:8092/3","MEDGEN:87201","NCIT:C27539"],"synonyms":[{"name":"infiltrating basal cell carcinoma","type":"exact"},{"name":"infiltrative basal cell carcinoma","type":"related"},{"name":"skin infiltrating basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002953","xrefs":{"Monarch":{"xref_id":"0002953"}}}


id: MONDO:0022311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Crouzon syndrome","termid":"MONDO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"cote katsantoni syndrome","secondary_identifiers":["GARD:1554","UMLS:C2931195","MEDGEN:419356","MESH:C536449"],"synonyms":[{"name":"ectodermal dysplasia osteosclerosis","type":"related"}],"termid":"MONDO:0022311","xrefs":{"Monarch":{"xref_id":"0022311"}}}


id: MONDO:0003626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare serous adenocarcinoma that arises from the uterine ligament.","definition_xrefs":["NCIT:C40136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine ligament adenocarcinoma","termid":"MONDO:0002741"},{"relation_name":"is_a","term_name":"cervical serous adenocarcinoma","termid":"MONDO:0003631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament serous adenocarcinoma","secondary_identifiers":["DOID:5747","MEDGEN:275561","UMLS:C1519872"],"synonyms":[{"name":"uterine ligament serous adenocarcinoma","type":"exact"}],"termid":"MONDO:0003626","xrefs":{"Monarch":{"xref_id":"0003626"}}}


id: PBO:0071323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 7","termid":"PBO:0071323"}


id: MONDO:0018408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"echinococcus granulosus infectious disease","termid":"MONDO:0044346"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic echinococcosis","secondary_identifiers":["DOID:1495","ICD9:122.4","SCTID:721822004","MEDGEN:1639841","Orphanet:400","MedDRA:10014096","GARD:2764","UMLS:C4553297"],"synonyms":[{"name":"Echinococcus granulosus infection","type":"exact"},{"name":"Echinococcus granulosus infection of lung","type":"exact"},{"name":"Echinococcus granulosus infection of thyroid","type":"exact"},{"name":"Echinococcus granulosus infectious disease of liver","type":"exact"},{"name":"Hydatidosis","type":"exact"},{"name":"echinococcus granulosus","type":"exact"},{"name":"echinococcus granulosus infectious disease of liver","type":"exact"},{"name":"echinococcus granulosus infectious disease of thyroid","type":"exact"},{"name":"hydatid disease","type":"exact"},{"name":"liver echinococcus granulosus","type":"exact"},{"name":"lung echinococcus granulosus","type":"exact"},{"name":"thyroid echinococcus granulosus","type":"exact"},{"name":"unilocular echinococcosis","type":"exact"},{"name":"unilocular hydatid disease","type":"exact"}],"termid":"MONDO:0018408","xrefs":{"Monarch":{"xref_id":"0018408"}}}


id: PBO:0001225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein (predicted)","termid":"PBO:0001225"}


id: PBO:0043586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XVIII alpha 1 chain","termid":"PBO:0043586"}


id: PBO:0043013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline kinase beta","termid":"PBO:0043013"}


id: MONDO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the sclera.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"scleritis","secondary_identifiers":["MEDGEN:48585","ICD9:379.00","NCIT:C119046","icd11.foundation:2097802831","UMLS:C0036416","HP:0100532","SCTID:78370002","MESH:D015423","DOID:13452"],"synonyms":[{"name":"scleritis","type":"exact"},{"name":"scleritis (disease)","type":"exact"}],"termid":"MONDO:0001718","xrefs":{"Monarch":{"xref_id":"0001718"}}}


id: GO:1903196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-dopa biosynthetic process.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of L-dopa biosynthetic process","termid":"GO:1903195"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"L-dopa biosynthetic process","termid":"GO:1903185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"negative regulation of L-dopa biosynthetic process","synonyms":[{"name":"down regulation of L-dopa anabolism","type":"exact"},{"name":"down regulation of L-dopa biosynthesis","type":"exact"},{"name":"down regulation of L-dopa biosynthetic process","type":"exact"},{"name":"down regulation of L-dopa formation","type":"exact"},{"name":"down regulation of L-dopa synthesis","type":"exact"},{"name":"down-regulation of L-dopa anabolism","type":"exact"},{"name":"down-regulation of L-dopa biosynthesis","type":"exact"},{"name":"down-regulation of L-dopa biosynthetic process","type":"exact"},{"name":"down-regulation of L-dopa formation","type":"exact"},{"name":"down-regulation of L-dopa synthesis","type":"exact"},{"name":"downregulation of L-dopa anabolism","type":"exact"},{"name":"downregulation of L-dopa biosynthesis","type":"exact"},{"name":"downregulation of L-dopa biosynthetic process","type":"exact"},{"name":"downregulation of L-dopa formation","type":"exact"},{"name":"downregulation of L-dopa synthesis","type":"exact"},{"name":"inhibition of L-dopa anabolism","type":"narrow"},{"name":"inhibition of L-dopa biosynthesis","type":"narrow"},{"name":"inhibition of L-dopa biosynthetic process","type":"narrow"},{"name":"inhibition of L-dopa formation","type":"narrow"},{"name":"inhibition of L-dopa synthesis","type":"narrow"},{"name":"negative regulation of L-dopa anabolism","type":"exact"},{"name":"negative regulation of L-dopa biosynthesis","type":"exact"},{"name":"negative regulation of L-dopa formation","type":"exact"},{"name":"negative regulation of L-dopa synthesis","type":"exact"}],"termid":"GO:1903196"}


id: PBO:0055330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2758","termid":"PBO:0055330"}


id: PBO:0002790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipin Ned1","termid":"PBO:0002790"}


id: PBO:0038742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTN1 divergent transcript","termid":"PBO:0038742"}


id: GO:0032754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-5 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-5 production","termid":"GO:0032674"},{"relation_name":"positively_regulates","term_name":"interleukin-5 production","termid":"GO:0032634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-5 production","secondary_identifiers":["GO:2000664","GO:0045407"],"synonyms":[{"name":"activation of interleukin-5 production","type":"narrow"},{"name":"positive regulation of IL-5 production","type":"exact"},{"name":"positive regulation of interleukin-5 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-5 secretion","type":"narrow"},{"name":"stimulation of interleukin-5 production","type":"narrow"},{"name":"up regulation of interleukin-5 production","type":"exact"},{"name":"up-regulation of interleukin-5 production","type":"exact"},{"name":"upregulation of interleukin-5 production","type":"exact"}],"termid":"GO:0032754"}


id: MONDO:0032789
data:
  {"annotated_genes":["SJAG_02042"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88767],"is_not":false,"summary":null,"term":"MONDO:0032789"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02042":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 71","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618504","MEDGEN:1673448","UMLS:C5193133","DOID:0081232"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL RECESSIVE 71","type":"related"},{"name":"MRT71","type":"related"},{"name":"Mental Retardation, Autosomal Recessive 71","type":"related"}],"termid":"MONDO:0032789","terms_by_termid":{"MONDO:0032789":null},"xrefs":{"Monarch":{"xref_id":"0032789"}}}


id: GO:0051037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription as part of a meiotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in meiotic cell cycle (obsolete GO:0051037)","synonyms":[{"name":"meiotic regulation of transcription","type":"exact"},{"name":"regulation of transcription, meiotic","type":"exact"}],"termid":"GO:0051037"}


id: PBO:0064876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R35 antisense RNA 1","termid":"PBO:0064876"}


id: MONDO:0010500
data:
  {"annotated_genes":["SJAG_03900"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87129],"is_not":false,"summary":null,"term":"MONDO:0010500"}]},"cv_name":"mondo","definition":"Any X-linked syndromic intellectual disability in which the cause of the disease is a mutation in the TAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03900":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked, syndromic 33","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225418","OMIM:300966","MEDGEN:895979"],"synonyms":[{"name":"MRXS33","type":"exact"},{"name":"TAF1 X-linked syndromic intellectual disability","type":"exact"},{"name":"X-linked syndromic intellectual disability caused by mutation in TAF1","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic 33, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 33","type":"exact"},{"name":"intellectual disability, X-linked, syndromic type 33","type":"exact"},{"name":"mental retardation, X-linked, syndromic 33","type":"exact"},{"name":"mental retardation, X-linked, syndromic type 33","type":"exact"}],"termid":"MONDO:0010500","terms_by_termid":{"MONDO:0010500":null},"xrefs":{"Monarch":{"xref_id":"0010500"}}}


id: PR:Q10177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A divalent metal cation transporter MntH that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese transporter pdt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.08","secondary_identifiers":["UniProtKB:Q10177"],"synonyms":[{"name":"Spom972h-mntH","type":"exact"}],"termid":"PR:Q10177"}


id: GO:0010108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which a glutamine stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of glutamine (obsolete GO:0010108)","synonyms":[{"name":"glutamine detection","type":"exact"},{"name":"glutamine perception","type":"related"},{"name":"glutamine sensing","type":"related"}],"termid":"GO:0010108"}


id: MONDO:0010902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondyloepiphyseal dysplasia, Reardon type is an extremely rare type of spondyloepiphyseal dysplasia described in several members of a single family to date and characterized by short stature, vertebral and femoral abnormalities, cervical instability and neurologic manifestations secondary to anomalies of the odontoid process.","definition_xrefs":["Orphanet:163662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia, Reardon type","secondary_identifiers":["GARD:16994","OMIM:600561","MEDGEN:322238","SCTID:718764004","MESH:C563472","UMLS:C1833603","icd11.foundation:1019322569"],"synonyms":[{"name":"spondyloepiphyseal dysplasia with atlantoaxial instability","type":"related"}],"termid":"MONDO:0010902","xrefs":{"Monarch":{"xref_id":"0010902"}}}


id: PBO:0034223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-participates_in_a_abiotic-biotic_interaction_with","termid":"PBO:0034223"}


id: PBO:0034791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex subunit, RNA-binding protein Rns1","termid":"PBO:0034791"}


id: GO:0140443
data:
  {"annotated_genes":["SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108524],"is_not":false,"summary":null,"term":"GO:0140443"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a mitochondrion and a plasma membrane either via membrane lipid binding or by interacting with a mitochondrial outer membrane protein, to establish or maintain the localization of the mitochondrion.","definition_xrefs":["PMID:31582398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"mitochondrion-plasma membrane adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrion plasma membrane adaptor activity","type":"exact"},{"name":"mitochondrion plasma membrane tether activity","type":"exact"},{"name":"plasma membrane-mitochondrion adaptor activity","type":"exact"},{"name":"plasma membrane-mitochondrion tether activity","type":"exact"}],"termid":"GO:0140443","terms_by_termid":{"GO:0140443":null}}


id: MONDO:0016367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatomyositis (DM) is a type of idiopathic inflammatory myopathy characterized by evocative skin lesions and symmetrical proximal muscle weakness.","definition_xrefs":["Orphanet:221"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic disease with skin involvement (obsolete MONDO:0017368)","termid":"MONDO:0017368"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"polymyositis","termid":"MONDO:0019127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336"],"is_obsolete":false,"name":"dermatomyositis","secondary_identifiers":["ICD9:710.3","NCIT:C26744","MedDRA:10012503","NORD:1048","MESH:D003882","DOID:10223","GARD:6263","UMLS:C0011633","NANDO:1200274","MEDGEN:8331","icd11.foundation:739030149","SCTID:396230008","EFO:0000398"],"synonyms":[{"name":"Amyopathic dermatomyositis","type":"related"},{"name":"DM","type":"exact"},{"name":"adult dermatomyositis","type":"narrow"},{"name":"dermatomyositis","type":"exact"},{"name":"dermatopolymyositis","type":"exact"},{"name":"polymyositis with skin involvement","type":"exact"}],"termid":"MONDO:0016367","xrefs":{"Monarch":{"xref_id":"0016367"}}}


id: PBO:0045953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like, fibronectin type III and laminin G domains","termid":"PBO:0045953"}


id: PR:Q9P7Z6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC5E4.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Z6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C5E4.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.10c","synonyms":[{"name":"Spom972h-SPCC5E4.10c","type":"exact"}],"termid":"PR:Q9P7Z6"}


id: PBO:0068803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 40, pseudogene","termid":"PBO:0068803"}


id: PBO:0069208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 463, pseudogene","termid":"PBO:0069208"}


id: PBO:0039242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDH1A2 antisense RNA 1","termid":"PBO:0039242"}


id: GO:0072171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric tubule are generated and organized. A mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric tubule morphogenesis","termid":"GO:0072171"}


id: PBO:0080162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge X-linked 3B","termid":"PBO:0080162"}


id: GO:0062121
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104289],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle chromosome organization process in which LinE complexes closely associate with chromatin during meiotic prophase to form mature linear elements.","definition_xrefs":["PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"part_of","term_name":"linear element assembly","termid":"GO:0030999"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"linear element maturation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"LinE chromosome loading","type":"exact"},{"name":"LinE focus formation","type":"exact"}],"termid":"GO:0062121","terms_by_termid":{"GO:0062123":null}}


id: GO:0015872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dopamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Dopamine is a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine transport","termid":"GO:0051937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"dopamine transport","termid":"GO:0015872"}


id: PBO:0017038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small-subunit processome, UTP-C complex subunit Utp22 (predicted)","termid":"PBO:0017038"}


id: GO:0052829
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117528],"is_not":false,"summary":null,"term":"GO:0052829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-myo-inositol 1,3,4-trisphosphate + H2O = myo-inositol 3,4-bisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"inositol-1,3,4-trisphosphate 1-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855232"],"termid":"GO:0052829","terms_by_termid":{"GO:0052829":null}}


id: PBO:0029290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_DSR-containing_meiosis_gene_mRNA_during_vegetative_growth","termid":"PBO:0029290"}


id: MONDO:0006097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate, locally aggressive lipomatous neoplasm. Microscopically, the adipose tissue contains large and pleomorphic lipoblasts, and is dissected by fibrous septa containing spindle cells. It requires a wide local excision, may recur locally, but never metastasizes.","definition_xrefs":["NCIT:C6505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of adipose tissue","termid":"MONDO:0021354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical lipomatous tumor","secondary_identifiers":["NCIT:C4250","UMLS:C1266129","MEDGEN:266102","EFO:1000099","ICDO:8850/1","DOID:5690"],"synonyms":[{"name":"ALT","type":"exact"},{"name":"Atypical lipoma","type":"exact"},{"name":"lipoma-like liposarcoma","type":"exact"},{"name":"liposarcoma, well differentiated (morphologic abnormality)","type":"exact"},{"name":"superficial well differentiated liposarcoma","type":"exact"},{"name":"well differentiated liposarcoma","type":"broad"},{"name":"well differentiated liposarcoma of superficial soft tissue","type":"exact"}],"termid":"MONDO:0006097","xrefs":{"Monarch":{"xref_id":"0006097"}}}


id: PBO:0060044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 32","termid":"PBO:0060044"}


id: PBO:0090704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp6","termid":"PBO:0090704"}


id: PR:000027586
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Pat1 kinase. Example: UniProtKB:P08965-1, Ser-438, MOD:00046|Thr-527, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:9062192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei2/Phos(S438,T527)","pombase_gene_id":"SPAC27D7.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: meiosis protein mei2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-mei2/Phos:1","type":"exact"},{"name":"mei2/Phos(S438,T527)","type":"exact"}],"termid":"PR:000027586"}


id: MONDO:0002853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal tumor with skeletal muscle differentiation affecting the rectum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum sarcoma","termid":"MONDO:0002168"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"rectum rhabdomyosarcoma","secondary_identifiers":["DOID:4053","NCIT:C5627","UMLS:C1335687","MEDGEN:235532"],"synonyms":[{"name":"rectal rhabdomyosarcoma","type":"exact"},{"name":"rectum rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma (disease) of rectum","type":"exact"},{"name":"rhabdomyosarcoma of rectum","type":"exact"},{"name":"rhabdomyosarcoma of the rectum","type":"exact"}],"termid":"MONDO:0002853","xrefs":{"Monarch":{"xref_id":"0002853"}}}


id: GO:0071575
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that penetrate only the external side of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of external side of plasma membrane (obsolete GO:0071575)","synonyms":[{"name":"integral to external leaflet of plasma membrane","type":"exact"},{"name":"integral to external side of plasma membrane","type":"narrow"}],"termid":"GO:0071575"}


id: PATO:0000046
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000046 relative frequency (obsolete PATO:0000046)","termid":"PATO:0000046"}


id: PBO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof11","termid":"PBO:0002502"}


id: GO:0052531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of fluxes of calcium ions that occur as part of the defense response of a host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont calcium ion flux (obsolete GO:0052531)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont Ca2+ flux","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont calcium ion flux","type":"exact"}],"termid":"GO:0052531"}


id: MONDO:0003941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromophobe renal cell carcinoma","termid":"MONDO:0017885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"classic variant of chromophobe renal cell carcinoma","secondary_identifiers":["UMLS:C1333062","NCIT:C27888","DOID:6605","MEDGEN:232080"],"synonyms":[{"name":"classic variant of chromophobe renal cell carcinoma","type":"exact"}],"termid":"MONDO:0003941","xrefs":{"Monarch":{"xref_id":"0003941"}}}


id: PBO:0072020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 7","termid":"PBO:0072020"}


id: MONDO:0014660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 15, primary, autosomal recessive","secondary_identifiers":["GARD:16123","DOID:0070277","OMIM:616486","MEDGEN:895496","UMLS:C4225310"],"synonyms":[{"name":"MCPH15","type":"related"},{"name":"microcephaly 15, primary, autosomal recessive","type":"exact"},{"name":"neurodevelopmental disorder with progressive microcephaly, spasticity, and brain abnormalities","type":"exact"}],"termid":"MONDO:0014660","xrefs":{"Monarch":{"xref_id":"0014660"}}}


id: FYPO:0006131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of gluconate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular gluconate level","synonyms":[{"name":"increased cellular gluconate level during mitotic cell cycle","type":"related"},{"name":"increased cellular gluconate level during vegetative growth","type":"exact"},{"name":"increased gluconate accumulation","type":"related"}],"termid":"FYPO:0006131"}


id: PBO:0076091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STUB1 divergent transcript","termid":"PBO:0076091"}


id: PBO:0070634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 5","termid":"PBO:0070634"}


id: PBO:0082538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; member of Srp1p/Tip1p family of serine-alanine-rich proteins; expressed under anaerobic conditions and required for anaerobic growth; TIR3 has a paralog, TIR2, that arose from the whole genome duplication","termid":"PBO:0082538"}


id: PBO:0114425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 7","termid":"PBO:0114425"}


id: MONDO:0023567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kozlowski Brown Hardwick syndrome","secondary_identifiers":["UMLS:C2931511","MEDGEN:419822","MESH:C537506"],"synonyms":[{"name":"unusual facies, hooked clavicles, 13 pairs of ribs, widened metaphyses, square shaped vertebral bodies and communicating hydrocephalus","type":"related"}],"termid":"MONDO:0023567","xrefs":{"Monarch":{"xref_id":"0023567"}}}


id: PBO:0089038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P1","termid":"PBO:0089038"}


id: MONDO:0012156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by defects in postsynaptic neuromuscular junctions with early-onset progressive muscle weakness that has material basis in mutation in the CHRNA1 gene on chromosome 2q.","definition_xrefs":["DOID:0110662","PMID:15079006","PMID:25792100","PMID:10195214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 1A","termid":"MONDO:0011088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenic syndrome, congenital, 1B, fast-channel","secondary_identifiers":["MEDGEN:909200","OMIM:608930","UMLS:C4225405","GARD:15445"],"synonyms":[{"name":"CMS1B","type":"exact"},{"name":"congenital myasthenic syndrome 1B","type":"related"},{"name":"congenital myasthenic syndrome 1B, fast-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 1B","type":"exact"},{"name":"myasthenic syndrome, congenital, 1B, FAST-channel","type":"related"},{"name":"myasthenic syndrome, congenital, 1B, fast-channel","type":"exact"}],"termid":"MONDO:0012156","xrefs":{"Monarch":{"xref_id":"0012156"}}}


id: PR:P55877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P55877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.07","synonyms":[{"name":"Spom972h-tif11","type":"exact"},{"name":"eIF-1A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 4C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P55877"}


id: GO:1905239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of canonical Wnt signaling pathway involved in osteoblast differentiation.","definition_xrefs":["GOC:BHF_miRNA","PMID:19342382","GOC:rph","GOC:BHF","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:1905239)","synonyms":[{"name":"regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:1905239"}


id: PR:Q9P6L4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC688.12c gene.","definition_xrefs":["UniProtKB:Q9P6L4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C688.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.12c","synonyms":[{"name":"Spom972h-SPAC688.12c","type":"exact"}],"termid":"PR:Q9P6L4"}


id: PBO:0051662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"InaF motif containing 2","termid":"PBO:0051662"}


id: PBO:0060504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4 pseudogene 3","termid":"PBO:0060504"}


id: PBO:0091262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER alcohol acetyltransferase involved in intermembrane phospholipid transfer","termid":"PBO:0091262"}


id: MONDO:0859313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with speech impairment and with or without seizures","secondary_identifiers":["OMIM:620114","UMLS:C5774252","MEDGEN:1824025"],"termid":"MONDO:0859313","xrefs":{"Monarch":{"xref_id":"0859313"}}}


id: GO:1900778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of fumiquinazoline A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline A biosynthetic process (obsolete GO:1900778)","synonyms":[{"name":"fumiquinazoline A anabolism","type":"exact"},{"name":"fumiquinazoline A biosynthesis","type":"exact"},{"name":"fumiquinazoline A formation","type":"exact"},{"name":"fumiquinazoline A synthesis","type":"exact"}],"termid":"GO:1900778"}


id: PBO:0056250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein","termid":"PBO:0056250"}


id: MONDO:0007175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR interval, variation in","secondary_identifiers":["MEDGEN:463601","OMIM:108980","UMLS:C3152251"],"synonyms":[{"name":"Atrioventricular conduction time, variation in","type":"related"},{"name":"PR interval, variation in","type":"exact"},{"name":"PR interval, variation type in","type":"exact"}],"termid":"MONDO:0007175","xrefs":{"Monarch":{"xref_id":"0007175"}}}


id: PBO:0067492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 627, pseudogene","termid":"PBO:0067492"}


id: PBO:0005143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L4 (predicted)","termid":"PBO:0005143"}


id: MONDO:0009838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder characterized by rigid, thick skin that covers the entire body and affects movements. The movement of the chest and abdomen is severely restricted. Affected individuals develop respiratory insufficiency which may lead to death.","definition_xrefs":["NCIT:C126559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Parana hard-skin syndrome","secondary_identifiers":["Orphanet:2812","MESH:C564905","GARD:2598","OMIM:260530","UMLS:C1850079","MEDGEN:337964"],"synonyms":[{"name":"Parana hard skin syndrome","type":"related"},{"name":"Parana hard-skin syndrome","type":"exact"},{"name":"hard skin syndrome Parana type","type":"exact"},{"name":"hard skin syndrome, Parana type","type":"exact"},{"name":"hard-skin syndrome, Parana type","type":"exact"}],"termid":"MONDO:0009838","xrefs":{"Monarch":{"xref_id":"0009838"}}}


id: MONDO:0016396
data:
  {"annotated_genes":["SJAG_04321","SJAG_04084"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[88714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"}]},"cv_name":"mondo","definition":"Pontocerebellar hypoplasia type 1 (PCH1), also known as Norman's disease, is a clinically and genetically heterogeneous group of autosomal recessive disorders with a prenatal onset characterized by diffuse muscular atrophy secondary to pontocerebellar hypoplasia and spinal cord anterior horn cell degeneration resulting in early death.","definition_xrefs":["Orphanet:2254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"bulbospinal muscular atrophy","termid":"MONDO:0016113"},{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"},{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04084":null,"SJAG_04321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025","MONDO:0005559","MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1780208","SCTID:718610008","GARD:10704","icd11.foundation:1227773923","MESH:C548069","UMLS:C5442006","DOID:0112322"],"synonyms":[{"name":"MRT32","type":"exact"},{"name":"Norman disease","type":"exact"},{"name":"PCH1","type":"exact"},{"name":"mental retardation, autosomal recessive 32","type":"related"}],"termid":"MONDO:0016396","terms_by_termid":{"MONDO:0013853":null,"MONDO:0014485":null},"xrefs":{"Monarch":{"xref_id":"0016396"}}}


id: MONDO:0021049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the vulva. Representative examples include Bartholin gland adenoma, vulvar nodular hidradenoma, vulvar carcinoma, and vulvar melanoma.","definition_xrefs":["NCIT:C3443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar disease","termid":"MONDO:0002187"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar neoplasm","secondary_identifiers":["UMLS:C0042995","ICD9:239.5","MEDGEN:22689","SCTID:126922007"],"synonyms":[{"name":"mammalian vulva neoplasm","type":"exact"},{"name":"mammalian vulva neoplasm (disease)","type":"exact"},{"name":"mammalian vulva tumor","type":"exact"},{"name":"mammalian vulva tumour","type":"exact"},{"name":"neoplasm of mammalian vulva","type":"exact"},{"name":"neoplasm of the vulva","type":"exact"},{"name":"neoplasm of vulva","type":"exact"},{"name":"tumor of mammalian vulva","type":"exact"},{"name":"tumor of the vulva","type":"exact"},{"name":"tumor of vulva","type":"exact"},{"name":"tumour of mammalian vulva","type":"exact"},{"name":"tumour of the vulva","type":"exact"},{"name":"tumour of vulva","type":"exact"},{"name":"vulva neoplasm","type":"exact"},{"name":"vulva tumor","type":"exact"},{"name":"vulva tumour","type":"exact"},{"name":"vulval neoplasm","type":"exact"},{"name":"vulvar neoplasm","type":"exact"},{"name":"vulvar tumor","type":"exact"},{"name":"vulvar tumour","type":"exact"}],"termid":"MONDO:0021049","xrefs":{"Monarch":{"xref_id":"0021049"}}}


id: GO:0048378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"regulation of lateral plate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048378"}


id: PBO:0085530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S29 and bacterial S14; RPS29A has a paralog, RPS29B, that arose from the whole genome duplication","termid":"PBO:0085530"}


id: GO:0046517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of octamethylcyclotetrasiloxane, a cyclic silicone-oxygen ring compound with two methyl groups attached to each silicone atom.","definition_xrefs":["GOC:ai","PMID:10224038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organosilicon catabolic process","termid":"GO:0046455"},{"relation_name":"is_a","term_name":"octamethylcyclotetrasiloxane metabolic process","termid":"GO:0046518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"octamethylcyclotetrasiloxane catabolic process","synonyms":[{"name":"octamethylcyclotetrasiloxane breakdown","type":"exact"},{"name":"octamethylcyclotetrasiloxane catabolism","type":"exact"},{"name":"octamethylcyclotetrasiloxane degradation","type":"exact"}],"termid":"GO:0046517"}


id: GO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell development","termid":"GO:0002064"}


id: GO:0046765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral budding that starts with formation of a membrane curvature in the host nuclear membrane.","definition_xrefs":["GOC:bf","ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"},{"relation_name":"part_of","term_name":"exit of virus from host cell nucleus by nuclear egress","termid":"GO:0046802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from nuclear membrane","secondary_identifiers":["GO:0046749"],"synonyms":[{"name":"nuclear membrane viral budding","type":"exact"},{"name":"nuclear membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from nuclear membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from nuclear membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from nuclear membrane","type":"exact"},{"name":"virus budding from nuclear membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from nuclear membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046765"}


id: PBO:0017018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small acidic protein (SMAP) domain containing protein","termid":"PBO:0017018"}


id: PBO:0062035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 4","termid":"PBO:0062035"}


id: PBO:0074928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 96A","termid":"PBO:0074928"}


id: PBO:0017500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1445 family mitochondrial protein (predicted)","termid":"PBO:0017500"}


id: GO:0009591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events by which a mechanical stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete perception of mechanical stimulus (obsolete GO:0009591)","synonyms":[{"name":"perception of mechanical stimulus","type":"exact"}],"termid":"GO:0009591"}


id: MONDO:0020784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short sleep, familial natural, 1 (obsolete MONDO:0020784)","secondary_identifiers":["OMIM:612975"],"synonyms":[{"name":"FNSS1","type":"related"},{"name":"SHORT SLEEP, FAMILIAL NATURAL, 1","type":"related"},{"name":"Short Sleep Phenotype","type":"related"},{"name":"short sleep, familial natural, 1","type":"exact"}],"termid":"MONDO:0020784","xrefs":{"Monarch":{"xref_id":"0020784"}}}


id: GO:0120171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that forms at the cell cortex in response to pheromone treatment and is required for the polarized growth of haploid yeast cells towards a mating partner during yeast mating. In the yeast Saccharomyces cerevisiae, this complex consists of Cdc24p, Far1p, Ste4p (G-protein beta subunit) and Ste18p (G-protein gamma subunit).","definition_xrefs":["PMID:10087263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cdc24p-Far1p-Gbetagamma complex","synonyms":[{"name":"CDC24-FAR1-BG complex","type":"exact"},{"name":"CDC24-FAR1-Gbetagamma complex","type":"exact"},{"name":"Cdc24p-Far1p-BG complex","type":"exact"}],"termid":"GO:0120171"}


id: PBO:0030537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_processing","termid":"PBO:0030537"}


id: GO:0071333
data:
  {"annotated_genes":["SJAG_01699","SJAG_02444","SJAG_00574","SJAG_01254","SJAG_04026","SJAG_01754","SJAG_03081","SJAG_00472","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108774,110959,118548,103744,96072,117515,111470,108424,107827],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular glucose homeostasis","termid":"GO:0001678"},{"relation_name":"is_a","term_name":"response to glucose","termid":"GO:0009749"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucose stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071333","terms_by_termid":{"GO:0010619":null}}


id: MONDO:0017116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital communicating hydrocephalus","secondary_identifiers":["Orphanet:269505","GARD:20998","UMLS:C5679774","MEDGEN:1842324"],"synonyms":[{"name":"congenital non-obstructive hydrocephalus","type":"exact"}],"termid":"MONDO:0017116","xrefs":{"Monarch":{"xref_id":"0017116"}}}


id: GO:1990320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXI) chains; type XXI collagen triple helices found in the extracellular matrix component of blood vessel walls and in the cytoplasm of cultured human aortic smooth muscle.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XXI trimer","termid":"GO:1990320"}


id: PBO:0003650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S28 (predicted)","termid":"PBO:0003650"}


id: PBO:0077767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 3","termid":"PBO:0077767"}


id: MONDO:0014719
data:
  {"annotated_genes":["SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87828],"is_not":false,"summary":null,"term":"MONDO:0014719"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0700092","MONDO:0005066","MONDO:0019254","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 35","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616647","DOID:0080458","UMLS:C4225256","MEDGEN:904159","GARD:17806","Orphanet:457375"],"synonyms":[{"name":"DEE35","type":"exact"},{"name":"EIEE35","type":"exact"},{"name":"ITPA-related encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 35","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 35","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 35","type":"exact"}],"termid":"MONDO:0014719","terms_by_termid":{"MONDO:0014719":null},"xrefs":{"Monarch":{"xref_id":"0014719"}}}


id: internal:pombase_gene_id
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombase_gene_id","termid":"internal:pombase_gene_id"}


id: GO:0039570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT2 (signal transducer and activator of transcription-2) activity by retaining STAT2 in the cytoplasm, so STAT2 is unable to translocate to the nucleus to activate transcription of its target genes.","definition_xrefs":["PMID:14557668"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT2 activity by negative regulation of STAT protein import into nucleus (obsolete GO:0039570)","synonyms":[{"name":"cytoplasmic sequestering of STAT2","type":"exact"},{"name":"cytoplasmic sequestration of STAT2","type":"exact"}],"termid":"GO:0039570"}


id: PBO:0067133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 181, pseudogene","termid":"PBO:0067133"}


id: GO:2000500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of induction of apoptosis in response to chemical stimulus.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of induction of apoptosis in response to chemical stimulus (obsolete GO:2000500)","synonyms":[{"name":"positive regulation of induction of apoptosis in response to chemical stimulus","type":"exact"},{"name":"positive regulation of induction of apoptosis in response to chemical substance","type":"exact"}],"termid":"GO:2000500"}


id: PBO:0028132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0028132"}


id: PBO:0001066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv25 (predicted)","termid":"PBO:0001066"}


id: GO:0015400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of ammonium from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete low-affinity secondary active ammonium transmembrane transporter activity (obsolete GO:0015400)","synonyms":[{"name":"low affinity ammonium transmembrane transporter activity","type":"related"},{"name":"low affinity secondary active ammonium transmembrane transporter activity","type":"exact"}],"termid":"GO:0015400"}


id: GO:0008227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular amine and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled amine receptor activity","synonyms":[{"name":"G-protein coupled amine receptor activity","type":"exact"},{"name":"amine receptor activity, G-protein coupled","type":"exact"},{"name":"biogenic amine receptor","type":"narrow"}],"termid":"GO:0008227"}


id: GO:0060124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the regulated release of growth hormone from a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth hormone secretion","termid":"GO:0060123"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"growth hormone secretion","termid":"GO:0030252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth hormone secretion","termid":"GO:0060124"}


id: GO:0047977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,9E,14Z)-(8x,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate + H2O = (5Z,9E,14Z)-(8x,11x,12S)-8,11,12-trihydroxyicosa-5,9,14-trienoate.","definition_xrefs":["MetaCyc:HEPOXILIN-EPOXIDE-HYDROLASE-RXN","EC:3.3.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hepoxilin-epoxide hydrolase activity","secondary_identifiers":["Reactome:R-HSA-2161949","RHEA:16665"],"synonyms":[{"name":"(5Z,9E,14Z)-(8xi,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate hydrolase activity","type":"related"},{"name":"hepoxilin A(3) hydrolase activity","type":"related"},{"name":"hepoxilin A3 hydrolase activity","type":"related"},{"name":"hepoxilin epoxide hydrolase activity","type":"related"},{"name":"hepoxylin hydrolase activity","type":"related"}],"termid":"GO:0047977"}


id: PBO:0052841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 3-1","termid":"PBO:0052841"}


id: GO:0044131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the symbiont stops, prevents or reduces its progression from an initial condition to a later condition, within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development of symbiont in host","termid":"GO:0044127"},{"relation_name":"is_a","term_name":"negative regulation of formation of structure involved in a symbiotic process","termid":"GO:0044147"},{"relation_name":"negatively_regulates","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of development of symbiont in host","termid":"GO:0044131"}


id: PBO:0054628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2033","termid":"PBO:0054628"}


id: PBO:0072967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1B member 2, pseudogene","termid":"PBO:0072967"}


id: MONDO:0020065
data:
  {"annotated_genes":["SJAG_03900","SJAG_04840"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030676"},{"annotations":[87662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010747"}]},"cv_name":"mondo","definition":"A dystonia that is combined with another movement disorder (e.g., myoclonus, parkinsonism).","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03900":null,"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"combined dystonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:98203","GARD:19432","MEDGEN:1842879","UMLS:C5680244"],"synonyms":[{"name":"dystonia-plus syndrome","type":"exact"}],"termid":"MONDO:0020065","terms_by_termid":{"MONDO:0010747":null,"MONDO:0030676":null},"xrefs":{"Monarch":{"xref_id":"0020065"}}}


id: PBO:0051604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 27","termid":"PBO:0051604"}


id: MONDO:0020570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Brill-Zinsser disease (obsolete MONDO:0020570)","termid":"MONDO:0020570","xrefs":{"Monarch":{"xref_id":"0020570"}}}


id: PBO:0034343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_with","termid":"PBO:0034343"}


id: RO:0008506
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship describing organisms that often occur together at the same time and space or in the same environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-occurs","termid":"RO:0008506"}


id: PBO:0040082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase D","termid":"PBO:0040082"}


id: PBO:0062949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasomal ATPase associated factor 1","termid":"PBO:0062949"}


id: PBO:0073894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A9 antisense RNA 1","termid":"PBO:0073894"}


id: PBO:0063111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARM1 antisense RNA 1","termid":"PBO:0063111"}


id: PBO:0015228
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CET1","termid":"PBO:0015228"}


id: PBO:0038896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor A2","termid":"PBO:0038896"}


id: PBO:0076992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP7 antisense RNA 1","termid":"PBO:0076992"}


id: GO:0097503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of sialic acid to a substrate molecule.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sialylation","termid":"GO:0097503"}


id: PBO:0110156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit, nuclear envelope specific subunit Cmp7","termid":"PBO:0110156"}


id: MONDO:0012686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 6","secondary_identifiers":["MESH:C567075","MEDGEN:372673","OMIM:611536","UMLS:C1970945"],"synonyms":[{"name":"MAFD6","type":"exact"},{"name":"MAJOR affective disorder 6","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 6","type":"exact"}],"termid":"MONDO:0012686","xrefs":{"Monarch":{"xref_id":"0012686"}}}


id: PBO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.6.1","termid":"PBO:0001622"}


id: FYPO:0004503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein having high molecular mass due to polyubiquitin conjugation is greater than normal.","definition_xrefs":["PMID:16149916","PMID:8247131","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular HMW ubiquitin conjugate level","synonyms":[{"name":"accumulation of HMW ubiquitin conjugates","type":"exact"},{"name":"accumulation of high molecular mass ubiquitin conjugates","type":"exact"},{"name":"accumulation of high molecular weight ubiquitin conjugates","type":"exact"},{"name":"increased HMW ubiquitin conjugate accumulation","type":"related"},{"name":"increased cellular HMW ubiquitin conjugate level during mitotic cell cycle","type":"related"},{"name":"increased cellular HMW ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular mass ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular weight ubiquitin conjugate level during vegetative growth","type":"exact"}],"termid":"FYPO:0004503"}


id: PBO:0059359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 5","termid":"PBO:0059359"}


id: GO:0140710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a Frizzled Nuclear Import pathway.","definition_xrefs":["PMID:22510459","PMID:22579286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"regulates","term_name":"Frizzled Nuclear Import pathway","termid":"GO:0140709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Frizzled Nuclear Import pathway","synonyms":[{"name":"regulation of FNI","type":"broad"},{"name":"regulation of Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140710"}


id: PBO:0060787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit C1","termid":"PBO:0060787"}


id: PBO:0069230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 485, pseudogene","termid":"PBO:0069230"}


id: MONDO:0013052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the KLHL7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 42","secondary_identifiers":["MESH:C567854","GARD:15593","MEDGEN:442864","OMIM:612943","DOID:0110386","ICD10CM:H35.5","UMLS:C2751986"],"synonyms":[{"name":"KLHL7 retinitis pigmentosa","type":"exact"},{"name":"RP42","type":"exact"},{"name":"retinitis pigmentosa 42","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in KLHL7","type":"exact"},{"name":"retinitis pigmentosa type 42","type":"exact"}],"termid":"MONDO:0013052","xrefs":{"Monarch":{"xref_id":"0013052"}}}


id: PBO:0056553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 3","termid":"PBO:0056553"}


id: MOD:01883
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by rearrangement and condensation of a cysteine with the carbonyl of the preceding residue to form a 5-imidazolinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues","termid":"MOD:00691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-imidazolinone ring crosslinked residues (Cys)","termid":"MOD:01883"}


id: GO:0048279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the endoplasmic reticulum.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"vesicle fusion with endoplasmic reticulum","synonyms":[{"name":"vesicle fusion with ER","type":"exact"}],"termid":"GO:0048279"}


id: GO:0009732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a hexose is received and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"},{"relation_name":"is_a","term_name":"detection of monosaccharide stimulus","termid":"GO:0034287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hexose stimulus","synonyms":[{"name":"perception of hexose stimulus","type":"related"}],"termid":"GO:0009732"}


id: GO:0047095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxycyclohexan-1-one + NADPH + O2 = 6-oxohexanoate + H2O + NADP+.","definition_xrefs":["EC:1.14.13.66","RHEA:33283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-hydroxycyclohexanone 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R03281","MetaCyc:1.14.13.66-RXN"],"synonyms":[{"name":"2-hydroxycyclohexan-1-one,NADPH:oxygen 2-oxidoreductase (1,2-lactonizing)","type":"related"}],"termid":"GO:0047095"}


id: PBO:0067646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 820, pseudogene","termid":"PBO:0067646"}


id: PBO:0034063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-kills","termid":"PBO:0034063"}


id: GO:1902312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:21489137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of copper ion transmembrane transport","termid":"GO:1902311"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of copper ion transmembrane transport","synonyms":[{"name":"down regulation of copper cation transmembrane transport","type":"exact"},{"name":"down regulation of copper ion membrane transport","type":"exact"},{"name":"down regulation of copper ion transmembrane transport","type":"exact"},{"name":"down-regulation of copper cation transmembrane transport","type":"exact"},{"name":"down-regulation of copper ion membrane transport","type":"exact"},{"name":"down-regulation of copper ion transmembrane transport","type":"exact"},{"name":"downregulation of copper cation transmembrane transport","type":"exact"},{"name":"downregulation of copper ion membrane transport","type":"exact"},{"name":"downregulation of copper ion transmembrane transport","type":"exact"},{"name":"inhibition of copper cation transmembrane transport","type":"narrow"},{"name":"inhibition of copper ion membrane transport","type":"narrow"},{"name":"inhibition of copper ion transmembrane transport","type":"narrow"},{"name":"negative regulation of copper cation transmembrane transport","type":"exact"},{"name":"negative regulation of copper ion membrane transport","type":"exact"}],"termid":"GO:1902312"}


id: MONDO:0000892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, invasive colon adenocarcinoma characterized by the presence of sheets of malignant epithelial cells with vesicular nuclei, prominent nucleoli, and abundant eosinophilic cytoplasm. It usually has a favorable prognosis.","definition_xrefs":["NCIT:C60641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenocarcinoma","termid":"MONDO:0002271"},{"relation_name":"is_a","term_name":"colorectal medullary carcinoma","termid":"MONDO:0020794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colon medullary carcinoma","secondary_identifiers":["UMLS:C1880119","MEDGEN:363630","ONCOTREE:CMC","DOID:0080183"],"synonyms":[{"name":"colon medullary carcinoma","type":"exact"},{"name":"medullary carcinoma of the colon","type":"related"},{"name":"medullary colon carcinoma","type":"related"}],"termid":"MONDO:0000892","xrefs":{"Monarch":{"xref_id":"0000892"}}}


id: GO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of B cells in the bone marrow.","definition_xrefs":["GOC:jal","PMID:16460922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central tolerance induction","termid":"GO:0002508"},{"relation_name":"is_a","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell tolerance induction","synonyms":[{"name":"central B lymphocyte tolerance induction","type":"exact"},{"name":"central B-cell tolerance induction","type":"exact"},{"name":"central B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002510"}


id: GO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of dopamine. from a presynapse, across a chemical synapse, the subsequent activation of dopamine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dph","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"synaptic transmission, dopaminergic","synonyms":[{"name":"dopaminergic synaptic transmission","type":"exact"}],"termid":"GO:0001963"}


id: PBO:0039770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AQP4 antisense RNA 1","termid":"PBO:0039770"}


id: PR:O14352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsm4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.06","synonyms":[{"name":"Spom972h-lsm4","type":"exact"}],"termid":"PR:O14352"}


id: PBO:0048239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 8","termid":"PBO:0048239"}


id: MONDO:0006357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from a pleomorphic adenoma in the parotid gland. Patients usually present with a history of a long-standing tumor mass which grew rapidly in the past few months. Patients with non-invasive or minimally invasive carcinoma have an excellent prognosis. In cases where there is invasion of the surrounding tissues, the clinical course is aggressive.","definition_xrefs":["NCIT:C5974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"major salivary gland carcinoma ex pleomorphic adenoma","termid":"MONDO:0006285"},{"relation_name":"is_a","term_name":"carcinoma of parotid gland","termid":"MONDO:0021331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"parotid gland carcinoma ex pleomorphic adenoma","secondary_identifiers":["SCTID:425127006","UMLS:C1335356","EFO:1000461","MEDGEN:233311"],"synonyms":[{"name":"carcinoma ex pleomorphic adenoma of parotid","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma of parotid gland","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma of the parotid","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma of the parotid gland","type":"exact"},{"name":"parotid carcinoma ex pleomorphic adenoma","type":"exact"},{"name":"parotid gland carcinoma ex pleomorphic adenoma","type":"exact"}],"termid":"MONDO:0006357","xrefs":{"Monarch":{"xref_id":"0006357"}}}


id: PBO:0088008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I HSP40 co-chaperone; involved in regulation of HSP90 and HSP70 functions; acts as an adaptor that helps Rsp5p recognize cytosolic misfolded proteins for ubiquitination after heat shock; critical for determining cell size at Start as a function of growth rate; involved in protein translocation across membranes; member of the DnaJ family; chimeric protein in which human p58IPK J domain replaces yeast Ydj1p J domain can complement yeast ydj1 mutant","termid":"PBO:0088008"}


id: FYPO:0006154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more pheromone response mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Pheromone response genes are normally transcribed in response to a pheromone stimulus.","definition_xrefs":["PomBase:mah","PMID:22900017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased level of pheromone response gene mRNA during vegetative growth","synonyms":[{"name":"increased level of pheromone response gene RNA during vegetative growth","type":"exact"},{"name":"increased level of pheromone response gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of pheromone response gene transcripts during vegetative growth","type":"exact"},{"name":"increased pheromone response gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006154"}


id: GO:1990468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A NuA3 complex that catalyzes the acetylation of Histone H3. In S. cerevisiae, this complex consists of Eaf6p, Nto1p, Sas3p, Taf14p, Pdp3 and associates with H3K4me3 via Pdp3p.","definition_xrefs":["GOC:rb","PMID:25104842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NuA3 histone acetyltransferase complex","termid":"GO:0033100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"NuA3b histone acetyltransferase complex","termid":"GO:1990468"}


id: PBO:0083456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene HAC1/YFL031W; YFL032W is not an essential gene","termid":"PBO:0083456"}


id: PBO:0009498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA hydrolase (predicted)","termid":"PBO:0009498"}


id: PBO:0028763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoplasmic_translation","termid":"PBO:0028763"}


id: PBO:0070144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 58 pseudogene","termid":"PBO:0070144"}


id: PBO:0029446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate-ammonia_ligase_activity","termid":"PBO:0029446"}


id: GO:0098804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a non-motile cilium.","definition_xrefs":["GOC:cilia","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary membrane","termid":"GO:0060170"},{"relation_name":"part_of","term_name":"non-motile cilium","termid":"GO:0097730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"non-motile cilium membrane","synonyms":[{"name":"nonmotile primary cilium membrane","type":"related"}],"termid":"GO:0098804"}


id: PBO:0002744
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMSH","termid":"PBO:0002744"}


id: GO:0044545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residues at several positions. In human, it contains the catalytic subunit MOF, NSL1/KIAA1267, NSL2/KANSL2, NSL3/KANSL3, MCRS1, PHF20, OGT1, WDR5 and HCF1.","definition_xrefs":["PMID:20018852","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"NSL complex","synonyms":[{"name":"non-specific lethal complex","type":"exact"}],"termid":"GO:0044545"}


id: GO:0033963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 5,6alpha-epoxy-5alpha-cholestan-3beta-ol + H2O = cholestane-3beta-5alpha,6beta-triol, and 5,6beta-epoxy-5beta-cholestan-3beta-ol + H2O = cholestane-3beta-5alpha,6beta-triol.","definition_xrefs":["EC:3.3.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"cholesterol-5,6-oxide hydrolase activity","synonyms":[{"name":"5,6alpha-epoxy-5alpha-cholestan-3beta-ol hydrolase activity","type":"related"},{"name":"ChEH","type":"related"},{"name":"cholesterol-epoxide hydrolase activity","type":"related"}],"termid":"GO:0033963"}


id: PBO:0087386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol transporter that transfers sterols between membranes; may regulate and coordinate formation of contact sites between organelles; localizes to ER-mitochondrial contact sites in a Tom70p- and Tom71p-dependent manner; mitochondrial localization requires GRAM domain; also localizes to ER-vacuole contact sites, in a Vac8p-dependent manner; has GRAM and StART-like (VASt) domains; one of six StART-like domain-containing proteins in yeast; conserved across eukaryotes","termid":"PBO:0087386"}


id: MONDO:0010679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Duchenne muscular dystrophy (DMD) is a neuromuscular disease characterized by rapidly progressive muscle weakness and wasting due to degeneration of skeletal, smooth and cardiac muscle.","definition_xrefs":["Orphanet:98896"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Duchenne muscular dystrophy","secondary_identifiers":["OMIM:310200","NANDO:1200488","NANDO:2200856","NCIT:C75482","MedDRA:10013801","MEDGEN:3925","MESH:D020388","SCTID:76670001","icd11.foundation:1479561744","DOID:11723","UMLS:C0013264","GARD:6291"],"synonyms":[{"name":"DMD","type":"exact"},{"name":"Duchenne muscular dystrophy","type":"exact"},{"name":"Duchenne muscular dystrophy, X-linked recessive","type":"exact"},{"name":"muscular dystrophy, Duchenne","type":"exact"},{"name":"muscular dystrophy, Duchenne type","type":"related"},{"name":"muscular dystrophy, pseudohypertrophic progressive, Duchenne type","type":"related"},{"name":"severe dystrophinopathy, Duchenne type","type":"exact"}],"termid":"MONDO:0010679","xrefs":{"Monarch":{"xref_id":"0010679"}}}


id: GO:2000962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellooligosaccharide metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide metabolic process","termid":"GO:2000960"},{"relation_name":"positively_regulates","term_name":"cellooligosaccharide metabolic process","termid":"GO:2000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellooligosaccharide metabolic process","synonyms":[{"name":"positive regulation of cellooligosaccharide metabolism","type":"exact"}],"termid":"GO:2000962"}


id: PBO:0069044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 289, pseudogene","termid":"PBO:0069044"}


id: PBO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid permease Per1","termid":"PBO:0002213"}


id: PBO:0034474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_protein_localization_to_double-strand_break_site","termid":"PBO:0034474"}


id: MONDO:0003637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign lung tumor with perivascular epithelioid cell differentiation. It is composed of round or oval cells with abundant clear or eosinophilic cytoplasm and distinct cell borders. The vast majority of patients are asymptomatic and the tumors are discovered incidentally. Excision is curative.","definition_xrefs":["NCIT:C38152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung benign neoplasm","termid":"MONDO:0002732"},{"relation_name":"is_a","term_name":"benign PEComa","termid":"MONDO:0020581"},{"relation_name":"is_a","term_name":"lung PEComa","termid":"MONDO:0020588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell-sugar-tumor of the lung","secondary_identifiers":["MEDGEN:232370","DOID:5763","UMLS:C1333065"],"synonyms":[{"name":"CCSTL","type":"exact"},{"name":"Sugar tumor","type":"exact"},{"name":"Sugar tumour","type":"exact"},{"name":"clear cell-Sugar-tumor of lung","type":"exact"},{"name":"clear cell-Sugar-tumor of the lung","type":"exact"},{"name":"lung clear cell tumor","type":"exact"},{"name":"lung clear cell tumour","type":"exact"},{"name":"lung clear cell-sugar-tumor","type":"related"}],"termid":"MONDO:0003637","xrefs":{"Monarch":{"xref_id":"0003637"}}}


id: GO:0003058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the hormones modulates the force of heart muscle contraction. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction by chemical signal","termid":"GO:0003057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hormonal regulation of the force of heart contraction","synonyms":[{"name":"hormonal cardiac inotropy","type":"exact"},{"name":"hormonal regulation of the force of heart muscle contraction","type":"related"}],"termid":"GO:0003058"}


id: FYPO:0004520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed processivity of a DNA-directed DNA polymerase activity is lower than normal. Processivity refers to the number of nucleotides incorporated into a nascent DNA strand per polymerase-DNA binding event.","definition_xrefs":["DOI:10.1038/npg.els.0001052","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA-directed DNA polymerase activity","termid":"FYPO:0004519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000002","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA-directed DNA polymerase processivity","synonyms":[{"name":"decreased DNA polymerase processivity","type":"broad"},{"name":"reduced DNA-directed DNA polymerase processivity","type":"exact"}],"termid":"FYPO:0004520"}


id: PBO:0069013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 257, pseudogene","termid":"PBO:0069013"}


id: GO:0002415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting polymeric IgA and polymeric IgM immunoglobulin, via transcytosis mediated by the polymeric immunoglobulin receptor (pIgR), from the basolateral surface to apical surface of an epithelial cell. At the apical surface the immunoglobulin binding portion of the pIgRis cleaved and remains bound to the transported immunoglobulin as secretory component (SC). The same process is used for the transport and excretion of IgA immune complexes to the luminal surface of the mucosa.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:16048543","ISBN:081533642X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin transcytosis in epithelial cells","termid":"GO:0002414"},{"relation_name":"part_of","term_name":"mucosal immune response","termid":"GO:0002385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor","synonyms":[{"name":"antibody transcytosis mediated by pIgR","type":"exact"},{"name":"immunoglobulin transcytosis mediated by pIgR","type":"exact"}],"termid":"GO:0002415"}


id: MONDO:0009911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin deficiency, isolated","secondary_identifiers":["OMIM:264110","ICD9:253.4","MEDGEN:75758","MESH:C562708","UMLS:C0271586","SCTID:67873006"],"synonyms":[{"name":"prolactin deficiency, isolated","type":"exact"}],"termid":"MONDO:0009911","xrefs":{"Monarch":{"xref_id":"0009911"}}}


id: PBO:0055276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2703","termid":"PBO:0055276"}


id: GO:0080064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A lipid oxidation process proceeding through a series of three successive monooxygenations of the alpha methyl group on the C4 carbon (CH3 to CH2OH to CHO to COOH) and resulting in this overall reaction: 4,4-dimethyl-9beta,19-cyclopropylsterol + 3 NADPH + 3 H+ + 3 O2 = 4-alpha-carboxy, 4-beta-methyl-9beta,19-cyclopropylsterol + 3 NADP+ + 3 H2O.","definition_xrefs":["GOC:pr","PMID:14653780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"4,4-dimethyl-9beta,19-cyclopropylsterol oxidation","synonyms":[{"name":"4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase activity","type":"related"}],"termid":"GO:0080064"}


id: PBO:0054048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1389","termid":"PBO:0054048"}


id: PATO:0001103
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001103 relative stiffness value (obsolete PATO:0001103)","termid":"PATO:0001103"}


id: PBO:0077292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 35A","termid":"PBO:0077292"}


id: MOD:01222
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-formyl-L-serine.","definition_xrefs":["PubMed:15627961","PubMed:15799070","Unimod:122#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-formylated residue","termid":"MOD:01483"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-formyl-L-serine","synonyms":[{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"}],"termid":"MOD:01222"}


id: GO:0002178
data:
  {"annotated_genes":["SJAG_00880","SJAG_01857","SJAG_01349","SJAG_04178","SJAG_02706","SJAG_02305","SJAG_04550","SJAG_04451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112098,76629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031211"},{"annotations":[80702,107456,98773,107914,95393,74848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017059"}]},"cv_name":"cellular_component","definition":"A protein complex with palmitoyltransferase activity.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01349":null,"SJAG_01857":null,"SJAG_02305":null,"SJAG_02706":null,"SJAG_04178":null,"SJAG_04451":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"palmitoyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0002178","terms_by_termid":{"GO:0017059":null,"GO:0031211":null}}


id: GO:0016345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chromosomes in the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during female meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"female meiosis chromosome segregation","termid":"GO:0016321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013","GO:0051179"],"is_obsolete":false,"name":"female meiotic chromosome movement towards spindle pole","synonyms":[{"name":"chromosome movement towards spindle pole during female meiosis","type":"exact"},{"name":"female meiotic chromosome movement","type":"broad"},{"name":"female meiotic chromosome movement to spindle pole","type":"exact"}],"termid":"GO:0016345"}


id: GO:0002318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a myeloid progenitor cell. Myeloid progenitor cells include progenitor cells for any of the myeloid lineages.","definition_xrefs":["GOC:add","PMID:16551264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid progenitor cell differentiation","termid":"GO:0002318"}


id: PBO:0081879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 826, pseudogene","termid":"PBO:0081879"}


id: MONDO:1010131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A debilitating condition characterized by a fibrocollagenous membrane encasing the small intestine, resulting in recurrent small bowel obstructions.","definition_xrefs":["PMID:24133081","PMID:30065556","PMID:39631118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal obstruction","termid":"MONDO:0004565"},{"relation_name":"is_a","term_name":"peritonitis","termid":"MONDO:1010128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"encapsulating peritoneal sclerosis","synonyms":[{"name":"EPS","type":"exact"},{"name":"abdominal cocoon syndrome","type":"exact"},{"name":"peritonitis chronica fibrosa incapsulata","type":"exact"},{"name":"sclerosing encapsulating peritonitis","type":"exact"}],"termid":"MONDO:1010131","xrefs":{"Monarch":{"xref_id":"1010131"}}}


id: PATO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the bearer's having a phosphate (PO4) group.","definition_xrefs":["wikipedia:en.wikipedia.org/wiki/Phosphorylated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"PATO:0002262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylated","termid":"PATO:0002220"}


id: PBO:0056993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 34a","termid":"PBO:0056993"}


id: PBO:0069443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 708, pseudogene","termid":"PBO:0069443"}


id: PBO:0085574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved DNA double-strand break repair; repairs breaks in DNA during vegetative growth via recombination and single-strand annealing; anneals complementary single-stranded DNA; forms nuclear foci upon DNA replication stress; required for loading of Rad52p to DSBs; regulates replication fork progression in DNA ligase I-deficient cells; paralog of Rad52p","termid":"PBO:0085574"}


id: MONDO:0006752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Erysipelothrix rhusiopathiae.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Erysipelothrix infectious disease","termid":"MONDO:0006751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Erysipelothrix rhusiopathiae infectious disease","secondary_identifiers":["DOID:0050061","ICD10CM:A26","UMLS:C1276801","MEDGEN:266170","EFO:1000928","MESH:D004887","SCTID:400105005"],"synonyms":[{"name":"Erysipelothrix rhusiopathiae caused disease or disorder","type":"exact"},{"name":"Erysipelothrix rhusiopathiae disease or disorder","type":"exact"},{"name":"erysipeloid","type":"exact"}],"termid":"MONDO:0006752","xrefs":{"Monarch":{"xref_id":"0006752"}}}


id: MONDO:0002814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma involving a adrenal gland.","definition_xrefs":["MONDO:patterns/carcinoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retroperitoneum carcinoma","termid":"MONDO:0001502"},{"relation_name":"is_a","term_name":"adrenal gland cancer","termid":"MONDO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adrenal carcinoma","secondary_identifiers":["DOID:3950","SCTID:255035007"],"synonyms":[{"name":"adrenal gland carcinoma","type":"exact"},{"name":"carcinoma of adrenal gland","type":"exact"},{"name":"carcinoma of the adrenal gland","type":"exact"}],"termid":"MONDO:0002814","xrefs":{"Monarch":{"xref_id":"0002814"}}}


id: MONDO:0007602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete favism, susceptibility to (obsolete MONDO:0007602)","secondary_identifiers":["OMIM:134700"],"synonyms":[{"name":"favism, susceptibility to","type":"exact"},{"name":"moved to {300908}","type":"related"}],"termid":"MONDO:0007602","xrefs":{"Monarch":{"xref_id":"0007602"}}}


id: GO:1902270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which (R)-carnitine is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(R)-carnitine transport","termid":"GO:1900749"},{"relation_name":"is_a","term_name":"carnitine transmembrane transport","termid":"GO:1902603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}


id: MONDO:0035763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic non-lupus full-house nephropathy","secondary_identifiers":["UMLS:C5680132","GARD:22285","Orphanet:567544","MEDGEN:1830099"],"synonyms":[{"name":"Idiopathic non-lupus FHN","type":"exact"}],"termid":"MONDO:0035763","xrefs":{"Monarch":{"xref_id":"0035763"}}}


id: PBO:0085081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear decapping endonuclease; targets mRNAs with unmethylated 7-methylguanosine cap structures and 5'-triphosphates; binds to and stabilizes the exoribonuclease Rat1p; required for pre-rRNA processing; involved in an early step of decapping nicotinamide adenine dinucleotide (NAD) capped nuclear NAD-RNAs; relocalizes to the cytosol in response to hypoxia; homologous to human DOM3Z","termid":"PBO:0085081"}


id: GO:0110157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular complex that binds lipoprotein receptors VLDLR and APOER2, cadherin-related neuronal receptors (CNRs) or alpha3beta1 integrin and induces various downstream, reelin-dependent, phosphorylation cascades. It ultimately affects polarization, differentiation, neuronal migration and layer formation in the embryonic brain and neuron growth, maturation, and synaptic activity in the postnatal and adult brain.","definition_xrefs":["PMID:21844191","PMID:28887403","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"reelin complex","termid":"GO:0110157"}


id: PBO:0052688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 12","termid":"PBO:0052688"}


id: GO:1904588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycoprotein stimulus.","definition_xrefs":["PMID:14597422","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to glycoprotein","termid":"GO:1904587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glycoprotein","synonyms":[{"name":"cellular response to glycoproteins","type":"exact"}],"termid":"GO:1904588"}


id: GO:0008772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-seryl-[isocitrate dehydrogenase] = ADP + H+ + O-phospho-L-seryl-[isocitrate dehydrogenase].","definition_xrefs":["RHEA:43540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine kinase activity","termid":"GO:0106310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0004672","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"[isocitrate dehydrogenase (NADP+)] kinase activity","secondary_identifiers":["EC:2.7.11.5","MetaCyc:PHOSICITDEHASE-RXN"],"synonyms":[{"name":"ATP:isocitrate dehydrogenase (NADP+) phosphotransferase activity","type":"related"},{"name":"ICDH kinase/phosphatase activity","type":"broad"},{"name":"IDH kinase activity","type":"related"},{"name":"IDH kinase/phosphatase activity","type":"broad"},{"name":"IDH-K/P","type":"related"},{"name":"IDHK/P","type":"broad"},{"name":"isocitrate dehydrogenase (NADP) kinase activity","type":"related"},{"name":"isocitrate dehydrogenase (NADP+) kinase activity","type":"related"},{"name":"isocitrate dehydrogenase kinase (phosphorylating) activity","type":"related"},{"name":"isocitrate dehydrogenase kinase activity","type":"related"},{"name":"isocitrate dehydrogenase kinase/phosphatase activity","type":"broad"}],"termid":"GO:0008772"}


id: GO:0051803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of cytolysis by that organism of cells in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytolysis in other organism involved in symbiotic interaction (obsolete GO:0051803)","synonyms":[{"name":"down regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"down-regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"downregulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"inhibition of cytolysis of cells in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"negative regulation of cytolysis of cells in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0051803"}


id: GO:0031247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of actin rods, a cellular structure consisting of parallel, hexagonally arranged actin tubules.","definition_xrefs":["GOC:pg","PMID:14706699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"actin rod assembly","synonyms":[{"name":"actin rod formation","type":"related"}],"termid":"GO:0031247"}


id: PBO:0059920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 6","termid":"PBO:0059920"}


id: GO:0010360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the anion channel activity.","definition_xrefs":["PMID:17319842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anion channel activity","termid":"GO:0010359"},{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of anion transmembrane transport","termid":"GO:1903960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anion channel activity","termid":"GO:0010360"}


id: PBO:0061679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP93 divergent transcript","termid":"PBO:0061679"}


id: SO:0001243
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A part of an miRNA primary_transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_primary_transcript_region","synonyms":[{"name":"miRNA primary transcript region","type":"exact"}],"termid":"SO:0001243"}


id: PBO:0050254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 32","termid":"PBO:0050254"}


id: PATO:0002154
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards the abdomen of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splayed","termid":"PATO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed ventral","synonyms":[{"name":"splayed anterior (human torso)","type":"exact"},{"name":"splayed inferior (human head)","type":"exact"}],"termid":"PATO:0002154"}


id: MONDO:0007622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete flood factor deficiency (obsolete MONDO:0007622)","secondary_identifiers":["MESH:C565009","OMIM:136150"],"synonyms":[{"name":"flood factor deficiency","type":"exact"}],"termid":"MONDO:0007622","xrefs":{"Monarch":{"xref_id":"0007622"}}}


id: PBO:0004214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase (predicted)","termid":"PBO:0004214"}


id: MONDO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ganglioneuroblastoma arising from the mediastinum.","definition_xrefs":["NCIT:C6627"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mediastinal cancer","termid":"MONDO:0005843"},{"relation_name":"is_a","term_name":"mediastinum neuroblastoma","termid":"MONDO:0001095"},{"relation_name":"is_a","term_name":"peripheral ganglioneuroblastoma","termid":"MONDO:0003327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinum ganglioneuroblastoma","secondary_identifiers":["DOID:10661","UMLS:C1334653","MEDGEN:235308"],"synonyms":[{"name":"ganglioneuroblastoma (disease) of mediastinum","type":"exact"},{"name":"ganglioneuroblastoma of mediastinum","type":"exact"},{"name":"ganglioneuroblastoma of the mediastinum","type":"exact"},{"name":"mediastinal ganglioneuroblastoma","type":"exact"},{"name":"mediastinum ganglioneuroblastoma (disease)","type":"exact"}],"termid":"MONDO:0001096","xrefs":{"Monarch":{"xref_id":"0001096"}}}


id: PBO:0051429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-9","termid":"PBO:0051429"}


id: PATO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000859 pinna reflex value (obsolete PATO:0000859)","termid":"PATO:0000859"}


id: GO:0034788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxy-2'-carboxybiphenyl + O2 = 2-hydroxy-6-oxo-6-(2-carboxyphenyl)-hexa-2,4-dienoate + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-dihydroxy-2'-carboxybiphenyl 1,2-dioxygenase activity (obsolete GO:0034788)","termid":"GO:0034788"}


id: MONDO:0004713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a gingiva of lower jaw.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival cancer","termid":"MONDO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"lower gum cancer","secondary_identifiers":["ICD9:143.1","MEDGEN:609602","SCTID:363384006","DOID:9125","UMLS:C0432581"],"synonyms":[{"name":"cancer of gingiva of lower jaw","type":"exact"},{"name":"gingiva of lower jaw cancer","type":"exact"},{"name":"malignant gingiva of lower jaw neoplasm","type":"exact"},{"name":"malignant neoplasm of gingiva of lower jaw","type":"exact"},{"name":"malignant tumor of lower gingiva","type":"exact"},{"name":"malignant tumor of lower gum","type":"exact"},{"name":"malignant tumour of lower gingiva","type":"exact"},{"name":"malignant tumour of lower gum","type":"exact"}],"termid":"MONDO:0004713","xrefs":{"Monarch":{"xref_id":"0004713"}}}


id: MONDO:0007228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachymesomelia-renal syndrome","secondary_identifiers":["MEDGEN:350586","OMIM:113470","UMLS:C1862084","MESH:C537096"],"synonyms":[{"name":"brachymesomelia renal syndrome","type":"related"},{"name":"brachymesomelia-renal syndrome","type":"exact"},{"name":"severe upper limb brachymesomelia, glomerulocystic renal dysplasia, cranial and facial abnormalities, corneal opacities","type":"related"}],"termid":"MONDO:0007228","xrefs":{"Monarch":{"xref_id":"0007228"}}}


id: GO:0032413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of an ion transporter.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transporter activity","termid":"GO:0032410"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transmembrane transport","termid":"GO:0034766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of ion transmembrane transporter activity","synonyms":[{"name":"down regulation of ion transporter activity","type":"exact"},{"name":"down-regulation of ion transporter activity","type":"exact"},{"name":"downregulation of ion transporter activity","type":"exact"},{"name":"inhibition of ion transporter activity","type":"narrow"},{"name":"negative regulation of ion transporter activity","type":"exact"}],"termid":"GO:0032413"}


id: GO:0003039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of oxygen are received and are converted to a molecular signal by chemoreceptors in a carotid body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of reduced oxygen by chemoreceptor signaling","termid":"GO:0003020"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by carotid body chemoreceptor signaling","termid":"GO:0003029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of reduced oxygen by carotid body chemoreceptor signaling","synonyms":[{"name":"detection of reduced oxygen by carotid body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003039"}


id: GO:0075280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uredinium development, a process that leads to the formation of a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"uredinium development","termid":"GO:0075279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uredinium development","termid":"GO:0075280"}


id: PBO:0047149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 181 member B","termid":"PBO:0047149"}


id: PBO:0005739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN component scaffold protein, centriolin ortholog Cdc11","termid":"PBO:0005739"}


id: GO:0102280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choline + NADP+ = betaine aldehyde + NADPH + H+.","definition_xrefs":["GOC:pz","PMID:21769646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline dehydrogenase activity","termid":"GO:0008812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"choline monooxygenase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN-12582"],"synonyms":[{"name":"choline monooxygenase activity (NADP-dependent)","type":"exact"}],"termid":"GO:0102280"}


id: GO:0030888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of B cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"is_a","term_name":"regulation of B cell activation","termid":"GO:0050864"},{"relation_name":"regulates","term_name":"B cell proliferation","termid":"GO:0042100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell proliferation","synonyms":[{"name":"regulation of B lymphocyte proliferation","type":"exact"},{"name":"regulation of B-cell proliferation","type":"exact"},{"name":"regulation of B-lymphocyte proliferation","type":"exact"}],"termid":"GO:0030888"}


id: GO:0006561
data:
  {"annotated_genes":["SJAG_00120","SJAG_03457","SJAG_00495","SJAG_00660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92711,79646,68767,65667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline metabolic process","termid":"GO:0006560"},{"relation_name":"is_a","term_name":"glutamine family amino acid biosynthetic process","termid":"GO:0009084"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00495":null,"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"proline biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"proline anabolism","type":"exact"},{"name":"proline biosynthesis","type":"exact"},{"name":"proline formation","type":"exact"},{"name":"proline synthesis","type":"exact"}],"termid":"GO:0006561","terms_by_termid":{"GO:0055129":null}}


id: GO:0047747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) ATP + cholate + CoA = AMP + diphosphate + choloyl-CoA and (2) ATP + (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate + CoA = AMP + diphosphate + (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA. This reaction is the first step in the conjugation of bile acids with amino acids, converting bile acids into their acyl-CoA thioesters. Chenodeoxycholate, deoxycholate, lithocholate and trihydroxycoprostanoate can also act as substrates.","definition_xrefs":["EC:6.2.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"cholate-CoA ligase activity","secondary_identifiers":["GO:0047477","MetaCyc:CHOLATE--COA-LIGASE-RXN"],"synonyms":[{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate--CoA ligase activity","type":"related"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate-CoA ligase activity","type":"exact"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate:CoA ligase (AMP-forming) activity","type":"related"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoate-CoA ligase activity","type":"related"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoate-CoA synthetase activity","type":"related"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoyl coenzyme A synthetase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanate-CoA ligase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanate:CoA ligase (AMP-forming)","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoate-CoA ligase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoate-CoA synthetase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl coenzyme A synthetase activity","type":"related"},{"name":"BAL activity","type":"related"},{"name":"THCA-CoA ligase activity","type":"related"},{"name":"bile acid CoA ligase activity","type":"related"},{"name":"bile acid coenzyme A ligase activity","type":"related"},{"name":"cholate thiokinase activity","type":"related"},{"name":"cholate:CoA ligase (AMP-forming)","type":"related"},{"name":"cholic acid:CoA ligase activity","type":"related"},{"name":"cholic thiokinase activity","type":"related"},{"name":"choloyl coenzyme A synthetase activity","type":"related"},{"name":"choloyl-CoA synthetase activity","type":"related"},{"name":"cholyl-CoA synthetase activity","type":"related"},{"name":"trihydroxycoprostanoyl-CoA synthetase activity","type":"related"}],"termid":"GO:0047747"}


id: GO:0035994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a myofibril being extended beyond its slack length.","definition_xrefs":["PMID:14583192","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to muscle stretch","termid":"GO:0035994"}


id: PBO:0055499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2933","termid":"PBO:0055499"}


id: PBO:0051345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-28","termid":"PBO:0051345"}


id: GO:0052614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + NADH + O2 + uracil = (Z)-3-ureidoacrylate + FMN + H+ + H2O + NAD+. Can also use thymine as a substrate.","definition_xrefs":["RHEA:31587","PMID:20400551","PMID:20369853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"uracil oxygenase activity","secondary_identifiers":["MetaCyc:RXN0-6444","EC:1.14.99.46"],"synonyms":[{"name":"pyrimidine oxygenase activity","type":"broad"}],"termid":"GO:0052614"}


id: MONDO:0045059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"},{"relation_name":"is_a","term_name":"cribriform carcinoma","termid":"MONDO:0006176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cribriform carcinoma of breast","secondary_identifiers":["icd11.foundation:1025219649","DOID:5675","MEDGEN:1843502","UMLS:C2138440"],"synonyms":[{"name":"cribriform carcinoma","type":"broad"},{"name":"ductal carcinoma, cribriform type","type":"exact"}],"termid":"MONDO:0045059","xrefs":{"Monarch":{"xref_id":"0045059"}}}


id: PBO:0043109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin target of PRMT1","termid":"PBO:0043109"}


id: PATO:0002379
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female fertility quality inhering in a female by virtue of the bearer's not being capable of reproducing because of surgical removal of ovaries and uterus.","definition_xrefs":["PATOC:MF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female sterile","termid":"PATO:0000892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovariohysterectomized female","termid":"PATO:0002379"}


id: GO:0032705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-21 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-21 production","termid":"GO:0032665"},{"relation_name":"negatively_regulates","term_name":"interleukin-21 production","termid":"GO:0032625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-21 production","secondary_identifiers":["GO:0045391"],"synonyms":[{"name":"down regulation of interleukin-21 production","type":"exact"},{"name":"down-regulation of interleukin-21 production","type":"exact"},{"name":"downregulation of interleukin-21 production","type":"exact"},{"name":"negative regulation of interleukin-21 biosynthetic process","type":"narrow"}],"termid":"GO:0032705"}


id: PBO:0060133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 34","termid":"PBO:0060133"}


id: PBO:0113011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atypical protein kinase; along with its paralog, ALK1, required for proper spindle positioning and nuclear segregation following mitotic arrest, proper organization of formins and polarisome components in mitosis, and survival after spindle assembly checkpoint delay; negatively regulates the morphogenesis checkpoint in response to polarity insults in opposition to ALK1; phosphorylated in response to DNA damage; similar to mammalian haspins","termid":"PBO:0113011"}


id: MONDO:1011745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"comedo syndrome, non-human animal","secondary_identifiers":["OMIA:001272"],"termid":"MONDO:1011745","xrefs":{"Monarch":{"xref_id":"1011745"}}}


id: PBO:0049619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 22","termid":"PBO:0049619"}


id: PBO:0002875
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.4.1","termid":"PBO:0002875"}


id: GO:0052212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by one of the organisms, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via secreted substance involved in symbiotic interaction (obsolete GO:0052212)","synonyms":[{"name":"modification of host morphology or physiology via effector molecule","type":"narrow"},{"name":"modification of host morphology or physiology via ellicitor","type":"narrow"},{"name":"modification of morphology or physiology of other organism via secreted substance during symbiotic interaction","type":"related"}],"termid":"GO:0052212"}


id: GO:0005613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete laminin receptor protein (obsolete GO:0005613)","synonyms":[{"name":"laminin receptor protein","type":"exact"}],"termid":"GO:0005613"}


id: PBO:0028488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_index","termid":"PBO:0028488"}


id: PBO:0053883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1163","termid":"PBO:0053883"}


id: GO:0043882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: malate(out) + Na+(out) = malate(in) + Na+(in).","definition_xrefs":["GOC:jl","PMID:10903309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transmembrane transporter activity","termid":"GO:0015140"},{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"malate:sodium symporter activity","secondary_identifiers":["RHEA:72295"],"synonyms":[{"name":"Na(+)-malate symporter activity","type":"exact"},{"name":"Na+:malate symporter activity","type":"exact"},{"name":"malate Na(+) symporter activity","type":"exact"},{"name":"malate-sodium symporter activity","type":"exact"},{"name":"malate/sodium cotransporter activity","type":"broad"},{"name":"malate/sodium symporter activity","type":"exact"},{"name":"malate:Na+ symporter activity","type":"exact"},{"name":"malate:sodium cotransporter activity","type":"broad"},{"name":"sodium-dependent malate transporter","type":"broad"},{"name":"sodium/malate symporter activity","type":"exact"},{"name":"sodium:malate symporter activity","type":"exact"}],"termid":"GO:0043882"}


id: GO:0043493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of a large and small subunit which catalyze the packaging of DNA into viral heads. Note that not all viral terminases have this structure, some exist as single polypeptides.","definition_xrefs":["GOC:mlg","PMID:18687036","GOC:jl","GOC:bm","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"viral terminase complex","synonyms":[{"name":"phage terminase complex","type":"narrow"},{"name":"virus terminase complex","type":"exact"}],"termid":"GO:0043493"}


id: PBO:0117013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNJ8 antisense RNA 1","termid":"PBO:0117013"}


id: PBO:0038325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immersed_in","termid":"PBO:0038325"}


id: PBO:0067048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 68, pseudogene","termid":"PBO:0067048"}


id: GO:0034528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-carboxy-2-hydroxy-8-carboxychromene = 2-hydroxy-3-carboxybenzalpyruvate.","definition_xrefs":["UM-BBD_reactionID:r0791"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-carboxy-2-hydroxy-8-carboxychromene isomerase activity (obsolete GO:0034528)","termid":"GO:0034528"}


id: PBO:0042401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 7","termid":"PBO:0042401"}


id: PBO:0018053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bystin family U3 and U14 snoRNA associated protein Enp1 (predicted)","termid":"PBO:0018053"}


id: GO:0032792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor CREB.","definition_xrefs":["GOC:dph","GOC:ecd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-binding transcription factor activity","termid":"GO:0043433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CREB transcription factor activity","synonyms":[{"name":"CREB inhibitor","type":"related"},{"name":"inhibition of CREB transcription factor","type":"exact"}],"termid":"GO:0032792"}


id: PBO:0054956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2370","termid":"PBO:0054956"}


id: MONDO:0005492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vascular reaction of the skin characterized by erythema and wheal formation due to localized increase of vascular permeability. The causative mechanism may be allergy, infection, or stress.","definition_xrefs":["MESH:D014581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"urticaria","secondary_identifiers":["ICD9:708.8","EFO:0005531","ICD10CM:L50","SCTID:126485001","NCIT:C3432","HP:0001025","UMLS:C0042109","ICD9:708","MEDGEN:22587","ICD9:708.9","DOID:1555"],"synonyms":[{"name":"Urticarias","type":"related"},{"name":"hives","type":"exact"},{"name":"urticaria","type":"exact"},{"name":"urticaria (disease)","type":"exact"}],"termid":"MONDO:0005492","xrefs":{"Monarch":{"xref_id":"0005492"}}}


id: PBO:0045133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 3","termid":"PBO:0045133"}


id: GO:0052681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (E,R)-alpha-bisabolene + diphosphate.","definition_xrefs":["RHEA:25436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-bisabolene synthase activity","secondary_identifiers":["EC:4.2.3.38","KEGG_REACTION:R08370","MetaCyc:RXN-8550"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(E)-alpha-bisabolene-forming] activity","type":"exact"},{"name":"bisabolene synthase activity","type":"broad"}],"termid":"GO:0052681"}


id: PBO:0045714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 2","termid":"PBO:0045714"}


id: GO:2000795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000794"},{"relation_name":"negatively_regulates","term_name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000795"}


id: PBO:0078851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC5 opposite strand","termid":"PBO:0078851"}


id: SO:0001897
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene contained within a transposable element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene","termid":"SO:0000336"},{"relation_name":"part_of","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_pseudogene","synonyms":[{"name":"transposable element pseudogene","type":"exact"}],"termid":"SO:0001897"}


id: GO:0048310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The partitioning of nuclei between daughter cells at cell division.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleus inheritance (obsolete GO:0048310)","synonyms":[{"name":"cell nucleus inheritance","type":"exact"}],"termid":"GO:0048310"}


id: GO:0030660
data:
  {"annotated_genes":["SJAG_04474","SJAG_02160","SJAG_04565","SJAG_04391","SJAG_02234","SJAG_04517","SJAG_01508","SJAG_02282","SJAG_04070","SJAG_02482","SJAG_01809","SJAG_00192","SJAG_04609","SJAG_01025","SJAG_00379","SJAG_04569","SJAG_04002"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114964,114752,79399,62727],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58962,66569],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[81686,72605,65254,75392,95069,100324,80112,109052,79796],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[58131,64240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030663"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle associated with the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"Golgi-associated vesicle","termid":"GO:0005798"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00379":null,"SJAG_01025":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02482":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"Golgi-associated vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi vesicle membrane","type":"related"}],"termid":"GO:0030660","terms_by_termid":{"GO:0030121":null,"GO:0030126":null,"GO:0030130":null,"GO:0030663":null}}


id: PBO:0091005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1708 family conserved fungal protein, cell division site","termid":"PBO:0091005"}


id: PBO:0028938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_cell_growth_during_recovery_from_nitrogen_starvation","termid":"PBO:0028938"}


id: GO:1904100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein O-linked glycosylation.","definition_xrefs":["GOC:TermGenie","PMID:24509081","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein glycosylation","termid":"GO:0060050"},{"relation_name":"is_a","term_name":"regulation of protein O-linked glycosylation","termid":"GO:1904098"},{"relation_name":"positively_regulates","term_name":"protein O-linked glycosylation","termid":"GO:0006493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006486"},{"rel_name":"positively_regulates","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"positive regulation of protein O-linked glycosylation","synonyms":[{"name":"activation of protein O-linked glycosylation","type":"narrow"},{"name":"activation of protein amino acid O-linked glycosylation","type":"narrow"},{"name":"positive regulation of protein amino acid O-linked glycosylation","type":"exact"},{"name":"up regulation of protein O-linked glycosylation","type":"exact"},{"name":"up regulation of protein amino acid O-linked glycosylation","type":"exact"},{"name":"up-regulation of protein O-linked glycosylation","type":"exact"},{"name":"up-regulation of protein amino acid O-linked glycosylation","type":"exact"},{"name":"upregulation of protein O-linked glycosylation","type":"exact"},{"name":"upregulation of protein amino acid O-linked glycosylation","type":"exact"}],"termid":"GO:1904100"}


id: GO:0097194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A stage of the apoptotic process that starts with the controlled breakdown of the cell through the action of effector caspases or other effector molecules (e.g. cathepsins, calpains etc.). Key steps of the execution phase are rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.","definition_xrefs":["PMID:21760595","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"execution phase of apoptosis","secondary_identifiers":["Reactome:R-HSA-75153"],"synonyms":[{"name":"apoptosis","type":"narrow"},{"name":"execution phase of apoptotic process","type":"exact"}],"termid":"GO:0097194"}


id: PBO:0066551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 14","termid":"PBO:0066551"}


id: FYPO:0006081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is increased.","definition_xrefs":["PMID:20705466","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cortical patch","termid":"FYPO:0000742"},{"relation_name":"is_a","term_name":"increased protein localization to cell cortex during vegetative growth","termid":"FYPO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to actin cortical patch","synonyms":[{"name":"increased protein localisation to actin cortical patch during vegetative growth","type":"exact"},{"name":"increased protein localization to F-actin patch","type":"exact"},{"name":"increased protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"increased protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"increased protein localization to actin patch","type":"exact"}],"termid":"FYPO:0006081"}


id: GO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetyl-beta-neuraminate + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = CMP-N-glycoloyl-beta-neuraminate + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.18.2-RXN","RHEA:16145"],"synonyms":[{"name":"CMP-N-acetylneuraminate hydroxylase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid hydroxylase activity","type":"exact"},{"name":"CMP-Neu5Ac hydroxylase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate monooxygenase activity","type":"related"}],"termid":"GO:0030338"}


id: MOD:00599
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom with one methyl group.","definition_xrefs":["Unimod:34","PubMed:11875433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated residue","synonyms":[{"name":"Me1Res","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"}],"termid":"MOD:00599"}


id: PBO:0082390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-isopropylmalate dehydrogenase (IMDH); catalyzes the third step in the leucine biosynthesis pathway; can additionally catalyze the conversion of beta-ethylmalate into alpha-ketovalerate","termid":"PBO:0082390"}


id: MONDO:0018412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare female infertility due to adrenal disorder of genetic origin (obsolete MONDO:0018412)","secondary_identifiers":["Orphanet:400018"],"termid":"MONDO:0018412","xrefs":{"Monarch":{"xref_id":"0018412"}}}


id: MONDO:0015035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type B (LCHb) is a form of lissencephaly with cerebellar hypoplasia characterized by subtle microcephaly, hypotonia and neurological and cognitive development delay. Hippocampal malformation is a characteristic imaging feature of LCHb.","definition_xrefs":["Orphanet:100012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type B","secondary_identifiers":["GARD:19732","MEDGEN:906879","icd11.foundation:1056934902","SCTID:715819005","UMLS:C4274993"],"termid":"MONDO:0015035","xrefs":{"Monarch":{"xref_id":"0015035"}}}


id: GO:0022005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process occurring before the brain has been specified along the neural axis that is required for the midbrain-hindbrain boundary to attain its fully functional state. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","PMID:15541513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary maturation","termid":"GO:0021732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary maturation during neural plate development","synonyms":[{"name":"midbrain-hindbrain boundary maturation involved in neural plate development","type":"related"}],"termid":"GO:0022005"}


id: GO:0039715
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A viral factory located in the nucleus of a host cell.","definition_xrefs":["VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral factory","termid":"GO:0039713"},{"relation_name":"part_of","term_name":"host cell nucleus","termid":"GO:0042025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nuclear viral factory","termid":"GO:0039715"}


id: GO:0010170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that catalyzes the synthesis of ADP-glucose and pyrophosphate from glucose-1-phosphate and ATP. In plants, the complex is a heterotetramer composed of two types of subunits (small and large). In bacteria, the enzyme complex is composed of four identical subunits.","definition_xrefs":["GOC:tb","PMID:12748181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"adenylyltransferase complex","termid":"GO:1902503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glucose-1-phosphate adenylyltransferase complex","termid":"GO:0010170"}


id: PBO:0064766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase H","termid":"PBO:0064766"}


id: PBO:0042557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 20","termid":"PBO:0042557"}


id: GO:0048018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a receptor to effect a change in the activity of the receptor. Ligands may be produced by the same cell that expresses the receptor. Ligands may also be expressed at the plasma membrane of an adjacent cell (e.g. Notch ligands) or be secreted and diffuse extracellularly from their point of origin to the receiving cell (e.g. interleukins).","definition_xrefs":["GOC:kv","GOC:molecular_function_refactoring","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0005488","GO:0098772","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"receptor ligand activity","secondary_identifiers":["Reactome:R-HSA-163625","GO:0071884","Reactome:R-HSA-381612"],"synonyms":[{"name":"receptor agonist activity","type":"broad"},{"name":"signaling molecule","type":"exact"},{"name":"signaling receptor ligand activity","type":"exact"}],"termid":"GO:0048018"}


id: GO:0047589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 5-aminopentanoate = 5-oxopentanoate + L-glutamate.","definition_xrefs":["RHEA:10212","EC:2.6.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"5-aminovalerate transaminase activity","secondary_identifiers":["KEGG_REACTION:R02274","MetaCyc:VAGL-RXN"],"synonyms":[{"name":"5-aminopentanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"5-aminovalerate aminotransferase activity","type":"exact"},{"name":"delta-aminovalerate aminotransferase activity","type":"related"},{"name":"delta-aminovalerate transaminase activity","type":"related"}],"termid":"GO:0047589"}


id: FYPO:0000662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified catalytic activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased catalytic activity","termid":"FYPO:0000662"}


id: GO:0060004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An automatic response to a stimulus beginning with a nerve impulse from a receptor and ending with the action of an effector such as a gland or a muscle. Signaling never reaches a level of consciousness.","definition_xrefs":["GOC:dph","ISBN:0877797099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reflex","secondary_identifiers":["Wikipedia:Reflex"],"termid":"GO:0060004"}


id: PBO:0002195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36/L42","termid":"PBO:0002195"}


id: MOD:01096
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-benzyl-L-threonine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-benzyl-L-threonine","termid":"MOD:01096"}


id: PBO:0088772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Iss1","termid":"PBO:0088772"}


id: PBO:0088873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg24c","termid":"PBO:0088873"}


id: MONDO:0008852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital central hypoventilation syndrome (obsolete MONDO:0008852)","secondary_identifiers":["NANDO:2100032","NANDO:2200198","NANDO:1200753"],"termid":"MONDO:0008852","xrefs":{"Monarch":{"xref_id":"0008852"}}}


id: PBO:0062890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovo like zinc finger 2","termid":"PBO:0062890"}


id: FYPO:0004273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ascospore release from an ascus is decreased.","definition_xrefs":["PomBase:mah","GO:0071998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased ascospore release from ascus","synonyms":[{"name":"reduced ascospore release from ascus","type":"exact"}],"termid":"FYPO:0004273"}


id: SO:0000429
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U3 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"U3_LTR_region","termid":"SO:0000424"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_five_prime_LTR_region","synonyms":[{"name":"U3 5' long term repeat region","type":"exact"},{"name":"U3 five prime LTR region","type":"exact"}],"termid":"SO:0000429"}


id: SO:0000444
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding exon in the 3' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_exon","termid":"SO:0000198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_noncoding_exon","synonyms":[{"name":"three prime noncoding exon","type":"exact"}],"termid":"SO:0000444"}


id: PBO:0039936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 40","termid":"PBO:0039936"}


id: PBO:0027011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027011"}


id: GO:0005129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a granulocyte macrophage colony-stimulating factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor receptor binding","synonyms":[{"name":"GM-CSF receptor binding","type":"exact"},{"name":"GM-CSF receptor ligand","type":"narrow"},{"name":"GMC-SF receptor ligand","type":"narrow"},{"name":"granulocyte macrophage colony stimulating factor receptor binding","type":"exact"},{"name":"granulocyte macrophage colony-stimulating factor","type":"narrow"},{"name":"granulocyte macrophage colony-stimulating factor receptor ligand","type":"narrow"}],"termid":"GO:0005129"}


id: GO:0043373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature T cell becomes committed to becoming a CD4-positive, alpha-beta T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell lineage commitment","termid":"GO:0002363"},{"relation_name":"is_a","term_name":"CD4-positive or CD8-positive, alpha-beta T cell lineage commitment","termid":"GO:0043369"},{"relation_name":"part_of","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell lineage commitment","synonyms":[{"name":"CD4-positive, alpha-beta T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive, alpha-beta T-cell lineage commitment","type":"exact"},{"name":"CD4-positive, alpha-beta T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0043373"}


id: GO:0006386
data:
  {"annotated_genes":["SJAG_03761","SJAG_00637","SJAG_02242","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57092,61794,101770,117972],"is_not":false,"summary":null,"term":"GO:0006386"}]},"cv_name":"biological_process","definition":"A transcription termination process that completes the production of a primary RNA polymerase II transcript. RNA polymerase III has an intrinsic ability to terminate transcription upon incorporation of at least 4 contiguous U residues.","definition_xrefs":["PMID:27371117","GOC:mah","PMID:12944462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription termination","termid":"GO:0006353"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_02242":null,"SJAG_03689":null,"SJAG_03761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"termination of RNA polymerase III transcription","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-73980","GO:0019225"],"synonyms":[{"name":"RNA polymerase III transcription termination","type":"exact"},{"name":"RNA polymerase III transcription termination factor activity","type":"related"},{"name":"transcription termination from Pol III promoter","type":"exact"},{"name":"transcription termination from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006386","terms_by_termid":{"GO:0006386":null}}


id: PBO:0061858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 2B","termid":"PBO:0061858"}


id: PBO:0030614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cell_wall-degrading_enzymes","termid":"PBO:0030614"}


id: GO:0033274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B2","synonyms":[{"name":"response to riboflavin","type":"exact"}],"termid":"GO:0033274"}


id: GO:0043326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of folate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to folate","termid":"GO:0043326"}


id: GO:0007003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere binding (obsolete GO:0007003)","synonyms":[{"name":"telomere binding","type":"exact"}],"termid":"GO:0007003"}


id: PBO:0074747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 105C","termid":"PBO:0074747"}


id: PBO:0091594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent aldo-keto reductase","termid":"PBO:0091594"}


id: FYPO:0001203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of coflocculation. In coflocculation, yeast cells coaggregate with cells of another species, usually bacteria.","definition_xrefs":["PMID:11472912","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"coflocculating cells","synonyms":[{"name":"co-flocculating cells","type":"exact"},{"name":"increased coflocculation","type":"exact"}],"termid":"FYPO:0001203"}


id: MONDO:0015626
data:
  {"annotated_genes":["SJAG_00243","SJAG_03345","SJAG_03811","SJAG_03137","SJAG_02680","SJAG_00858","SJAG_04334","SJAG_03072","SJAG_03081","SJAG_04495","SJAG_02289","SJAG_00103","SJAG_01190","SJAG_01797","SJAG_01352","SJAG_03046","SJAG_01402","SJAG_04882","SJAG_01159","SJAG_00488","SJAG_04409","SJAG_03248","SJAG_01649","SJAG_00637","SJAG_03815","SJAG_02016","SJAG_02919","SJAG_02286","SJAG_00031","SJAG_03495","SJAG_04567"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014711"},{"annotations":[88879,88878,88880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011687"},{"annotations":[88419,88420,88421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012096"},{"annotations":[88291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013212"},{"annotations":[87636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[88531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014511"},{"annotations":[87254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014566"},{"annotations":[87702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012012"},{"annotations":[86966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014074"},{"annotations":[88853,88852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013338"},{"annotations":[88690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014467"},{"annotations":[86986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012231"},{"annotations":[87145,87146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010949"},{"annotations":[87317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011570"},{"annotations":[87886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011091"},{"annotations":[87763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014735"},{"annotations":[88034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011066"},{"annotations":[88875,88876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011534"},{"annotations":[88581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012640"},{"annotations":[87755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014733"},{"annotations":[87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010479"},{"annotations":[87294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010689"},{"annotations":[88000,87999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010699"},{"annotations":[87954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014906"},{"annotations":[88916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032728"},{"annotations":[89058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011675"},{"annotations":[88920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030677"},{"annotations":[88311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011002"}]},"cv_name":"mondo","definition":"An inherited degenerative disorder involving the peripheral nerves. It is caused by mutations in the genes that are responsible for the production of proteins necessary for the function and structure of the peripheral nerves. It is characterized by muscle atrophy and weakness in the feet, legs, hands, and arms and loss of sensation in the limbs.","definition_xrefs":["NCIT:C75467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00103":null,"SJAG_00243":null,"SJAG_00488":null,"SJAG_00637":null,"SJAG_00858":null,"SJAG_01159":null,"SJAG_01190":null,"SJAG_01352":null,"SJAG_01402":null,"SJAG_01649":null,"SJAG_01797":null,"SJAG_02016":null,"SJAG_02286":null,"SJAG_02289":null,"SJAG_02680":null,"SJAG_02919":null,"SJAG_03046":null,"SJAG_03072":null,"SJAG_03081":null,"SJAG_03137":null,"SJAG_03248":null,"SJAG_03345":null,"SJAG_03495":null,"SJAG_03811":null,"SJAG_03815":null,"SJAG_04334":null,"SJAG_04409":null,"SJAG_04495":null,"SJAG_04567":null,"SJAG_04882":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200016","DOID:10595","MedDRA:10034699","MEDGEN:2980","NORD:919","NANDO:2200855","GARD:6034","Orphanet:166","ICD9:356.1","MESH:D002607","OMIMPS:118220","UMLS:C0007959"],"synonyms":[{"name":"CMT","type":"exact"},{"name":"CMT - Charcot-Marie-Tooth disease","type":"exact"},{"name":"CMT/HMSN","type":"exact"},{"name":"Charcot Marie Tooth disease","type":"related"},{"name":"Charcot Marie Tooth muscular atrophy","type":"exact"},{"name":"Charcot-Marie-Tooth disease","type":"exact"},{"name":"Charcot-Marie-Tooth disease/hereditary motor and sensory neuropathy","type":"related"},{"name":"Charcot-Marie-Tooth hereditary neuropathy","type":"exact"},{"name":"hereditary motor and sensory neuropathy","type":"broad"},{"name":"hereditary sensorimotor neuropathy","type":"broad"},{"name":"peroneal muscular atrophy","type":"exact"}],"termid":"MONDO:0015626","terms_by_termid":{"MONDO:0010479":null,"MONDO:0010689":null,"MONDO:0010699":null,"MONDO:0010949":null,"MONDO:0011002":null,"MONDO:0011066":null,"MONDO:0011091":null,"MONDO:0011534":null,"MONDO:0011570":null,"MONDO:0011675":null,"MONDO:0011687":null,"MONDO:0012012":null,"MONDO:0012096":null,"MONDO:0012231":null,"MONDO:0012640":null,"MONDO:0013212":null,"MONDO:0013338":null,"MONDO:0013644":null,"MONDO:0014074":null,"MONDO:0014467":null,"MONDO:0014511":null,"MONDO:0014566":null,"MONDO:0014711":null,"MONDO:0014733":null,"MONDO:0014735":null,"MONDO:0014906":null,"MONDO:0030677":null,"MONDO:0032728":null},"xrefs":{"Monarch":{"xref_id":"0015626"}}}


id: MONDO:0009910
data:
  {"annotated_genes":["SJAG_04934"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87978],"is_not":false,"summary":null,"term":"MONDO:0009910"}]},"cv_name":"mondo","definition":"Wiedemann-Rautenstrauch syndrome is a very rare disorder with features of premature aging recognizable at birth, decreased subcutaneous fat, hypotrichosis, relative macrocephaly and dysmorphism.","definition_xrefs":["Orphanet:3455"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"},{"relation_name":"is_a","term_name":"progeria","termid":"MONDO:0020732"},{"relation_name":"is_a","term_name":"POLR3A-related disorder","termid":"MONDO:0700276"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0019303","MONDO:0005497"],"is_obsolete":false,"name":"Wiedemann-Rautenstrauch syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0406586","DOID:0081333","NCIT:C121565","OMIM:264090","SCTID:238874008","MESH:C536423","ICD9:259.8","GARD:330","MEDGEN:140806"],"synonyms":[{"name":"Wiedemann Rautenstrauch Syndrome","type":"exact"},{"name":"Wiedemann Rautenstrauch syndrome","type":"related"},{"name":"Wiedemann-Rautenstrauch syndrome","type":"exact"},{"name":"neonatal progeroid syndrome","type":"exact"},{"name":"progeroid syndrome neonatal","type":"related"},{"name":"progeroid syndrome, neonatal","type":"related"}],"termid":"MONDO:0009910","terms_by_termid":{"MONDO:0009910":null},"xrefs":{"Monarch":{"xref_id":"0009910"}}}


id: GO:0032988
data:
  {"annotated_genes":["SJAG_03301","SJAG_05025","SJAG_00206","SJAG_02560","SJAG_00597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57277,76657,80449,89587,64563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000390"}]},"cv_name":"biological_process","definition":"The disaggregation of a protein-RNA complex into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"is_a","term_name":"protein-RNA complex organization","termid":"GO:0071826"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00206":null,"SJAG_00597":null,"SJAG_02560":null,"SJAG_03301":null,"SJAG_05025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-RNA complex disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"RNA-protein complex disassembly","type":"exact"},{"name":"RNP complex disassembly","type":"exact"},{"name":"ribonucleoprotein complex disassembly","type":"exact"}],"termid":"GO:0032988","terms_by_termid":{"GO:0000390":null}}


id: PBO:0038446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAR2 splicing factor","termid":"PBO:0038446"}


id: PBO:0086154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pre-mRNA splicing; associates with the spliceosome and interacts with splicing factors Prp22p and Prp46p; orthologous to human transcriptional coactivator SKIP and can activate transcription of a reporter gene","termid":"PBO:0086154"}


id: GO:0019940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete SUMO-dependent protein catabolic process (obsolete GO:0019940)","synonyms":[{"name":"SUMO-dependent protein breakdown","type":"exact"},{"name":"SUMO-dependent protein catabolic process","type":"exact"},{"name":"SUMO-dependent protein catabolism","type":"exact"},{"name":"SUMO-dependent protein degradation","type":"exact"}],"termid":"GO:0019940"}


id: GO:0048135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a group of interconnected cells derived from a single female gonial founder cell.","definition_xrefs":["PMID:10370240","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line cyst formation","termid":"GO:0048134"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line cyst formation","synonyms":[{"name":"female germline cyst formation","type":"exact"}],"termid":"GO:0048135"}


id: FYPO:0004168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after entering stationary phase, under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal viability in stationary phase","termid":"FYPO:0001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal viability in stationary phase during glucose starvation","synonyms":[{"name":"normal cell population viability in stationary phase during glucose starvation","type":"exact"},{"name":"normal viability in stationary phase during glucose depletion","type":"exact"},{"name":"normal viability in stationary phase during glucose deprivation","type":"exact"},{"name":"normal viability in stationary phase during glucose limitation","type":"related"}],"termid":"FYPO:0004168"}


id: PR:O59721
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pus4 gene.","definition_xrefs":["UniProtKB:O59721","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.10","synonyms":[{"name":"Spom972h-pus4","type":"exact"},{"name":"psi55 synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA pseudouridine(55) synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA pseudouridylate synthase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-uridine isomerase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59721"}


id: PBO:0084723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; required for assembly of cytochrome c oxidase","termid":"PBO:0084723"}


id: PBO:0113296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteasome-binding protein; interacts physically with multiple subunits of the 20S proteasome and genetically with genes encoding 20S core particle and 19S regulatory particle subunits; specifically blocks all three proteasome active sites; exhibits boundary activity which inhibits the propagation of heterochromatic silencing; contains a PI31 proteasome regulator domain and sequence similarity with human PSMF1, a proteasome inhibitor; not an essential gene","termid":"PBO:0113296"}


id: GO:0090139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which mitochondrial chromosomal DNA and associated proteins organize into a compact, orderly structure.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial chromosome packaging","synonyms":[{"name":"mitochondrial DNA packaging","type":"exact"}],"termid":"GO:0090139"}


id: GO:0102669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: daidzein 7-O-beta-D-glucoside + H2O = daidzein + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isoflavone-7-O-glucoside beta-glucosidase activity (obsolete GO:0102669)","termid":"GO:0102669"}


id: PBO:0048356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 67","termid":"PBO:0048356"}


id: PBO:0064264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and coiled-coil domain containing D1","termid":"PBO:0064264"}


id: PBO:0083174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF TRM5/YHR070W","termid":"PBO:0083174"}


id: PBO:0001006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor (predicted)","termid":"PBO:0001006"}


id: PBO:0089856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent chromatin remodeller Ino80","termid":"PBO:0089856"}


id: MONDO:1011310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Developmental defect during embryogenesis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310","xrefs":{"Monarch":{"xref_id":"1011310"}}}


id: PATO:0001483
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Absence of an organ, tissue or cell due to failure to develop from a primordium or precursor cell.","definition_xrefs":["PATOC:GVG","PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aplastic/hypoplastic","termid":"PATO:0002290"},{"relation_name":"is_a","term_name":"agenesis","termid":"PATO:0002291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aplastic","synonyms":[{"name":"aplasia","type":"exact"},{"name":"undeveloped","type":"exact"}],"termid":"PATO:0001483"}


id: MONDO:0700203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pestivirus infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pestivirus infectious disease, non-human animal","termid":"MONDO:0700203","xrefs":{"Monarch":{"xref_id":"0700203"}}}


id: PBO:0072888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding kinase family member 3","termid":"PBO:0072888"}


id: PBO:0090309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic solute transmembrane transporter","termid":"PBO:0090309"}


id: PBO:0077994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing 2B","termid":"PBO:0077994"}


id: PBO:0083835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; involved in the assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); involved in DNA mismatch repair during slow growth; weak similarity to Msh1p; structural study suggests Hsm3p is a scaffold protein for Rpt1p-Rpt2p complex formation; ortholog of human 19S subunit S5b","termid":"PBO:0083835"}


id: GO:0140832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + L-histidine(out) + Na+(out) = H+(out) + L-histidine(in) + Na+(in).","definition_xrefs":["PMID:10619430","PMID:11742981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine transmembrane transporter activity","termid":"GO:0005290"},{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"},{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-histidine, sodium:proton antiporter activity","secondary_identifiers":["RHEA:71135"],"termid":"GO:0140832"}


id: PBO:0068642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 23, pseudogene","termid":"PBO:0068642"}


id: PBO:0034634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_segregation_during_meiosis_I_with_split_kinetochore_and_normal_chromosome_separation","termid":"PBO:0034634"}


id: GO:0052794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of alpha-(2->3)-glycosidic linkages of terminal sialic residues in substrates.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete exo-alpha-(2->3)-sialidase activity (obsolete GO:0052794)","synonyms":[{"name":"exo-alpha-(2,3)-sialidase activity","type":"exact"},{"name":"exo-alpha-2,3-sialidase activity","type":"exact"}],"termid":"GO:0052794"}


id: PBO:0056349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP6 domain containing 1","termid":"PBO:0056349"}


id: PBO:0051253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-16-1 (pseudogene)","termid":"PBO:0051253"}


id: PBO:0055582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3018","termid":"PBO:0055582"}


id: PBO:0049575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.W histone 3, pseudogene","termid":"PBO:0049575"}


id: PBO:0044961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 7","termid":"PBO:0044961"}


id: PBO:0053090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 2B","termid":"PBO:0053090"}


id: PBO:0084258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositolphosphotransferase; involved in synthesis of mannose-(inositol-P)2-ceramide (M(IP)2C), the most abundant sphingolipid; can mutate to resistance to the antifungals syringomycin E and DmAMP1 and to K. lactis zymocin","termid":"PBO:0084258"}


id: PBO:0070382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chondrogenesis RNA","termid":"PBO:0070382"}


id: MONDO:0020275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Albinism that affects the eyes, including ocular albinism and oculocutaneous albinism.","definition_xrefs":["Wikipedia:Albinism"],"gene_count":0,"genotype_count":0,"name":"obsolete oculocutaneous or ocular albinism (obsolete MONDO:0020275)","secondary_identifiers":["Orphanet:98706"],"termid":"MONDO:0020275","xrefs":{"Monarch":{"xref_id":"0020275"}}}


id: MONDO:0017051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classic maple syrup urine disease (classic MSUD) is the most severe and probably common form of MSUD characterized by a maple syrup odor in the cerumen at birth, poor feeding, lethargy and focal dystonia, followed by progressive encephalopathy and central respiratory failure if untreated.","definition_xrefs":["Orphanet:268145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maple syrup urine disease","termid":"MONDO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"classic maple syrup urine disease","secondary_identifiers":["MEDGEN:78689","GARD:17263","NANDO:2201078","UMLS:C0268568"],"synonyms":[{"name":"classic BCKD deficiency","type":"exact"},{"name":"classic MSUD","type":"exact"},{"name":"classic branched-chain 2-ketoacid dehydrogenase deficiency","type":"exact"},{"name":"classic branched-chain alpha-ketoacid dehydrogenase deficiency","type":"exact"},{"name":"classic branched-chain ketoaciduria","type":"exact"},{"name":"classic maple syrup urine disease","type":"exact"}],"termid":"MONDO:0017051","xrefs":{"Monarch":{"xref_id":"0017051"}}}


id: PATO:0002203
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Handedness where the organism preferentially uses the right hand or foot for tasks requiring the use of a single hand or foot or a dominant hand or foot.","definition_xrefs":["birnlex:2184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"handedness","termid":"PATO:0002201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right handedness","termid":"PATO:0002203"}


id: PBO:0067336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 429, pseudogene","termid":"PBO:0067336"}


id: PBO:0078474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotropin releasing hormone degrading enzyme","termid":"PBO:0078474"}


id: MONDO:1012792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypotrichosis that occurs in cattle due to a mutation in the KRT71 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypotrichosis, non-human animal","termid":"MONDO:1012977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis, KRT71-related, cattle","secondary_identifiers":["OMIA:002114-9913"],"termid":"MONDO:1012792","xrefs":{"Monarch":{"xref_id":"1012792"}}}


id: GO:0019761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside biosynthetic process","termid":"GO:0016144"},{"relation_name":"is_a","term_name":"glucosinolate metabolic process","termid":"GO:0019760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"glucosinolate biosynthetic process","synonyms":[{"name":"glucosinolate anabolism","type":"exact"},{"name":"glucosinolate biosynthesis","type":"exact"},{"name":"glucosinolate formation","type":"exact"},{"name":"glucosinolate synthesis","type":"exact"}],"termid":"GO:0019761"}


id: PBO:0060185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 5AC, oligomeric mucus/gel-forming","termid":"PBO:0060185"}


id: MONDO:0000516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondroma that involves the phalanx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"chondroma","termid":"MONDO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phalanx chondroma","secondary_identifiers":["DOID:0050898"],"synonyms":[{"name":"phalanx chondroma","type":"exact"}],"termid":"MONDO:0000516","xrefs":{"Monarch":{"xref_id":"0000516"}}}


id: GO:0036403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8S,9E,11Z,14Z)-8-hydroperoxyicosa-5,9,11,14-tetraenoate.","definition_xrefs":["PMID:10625675","GOC:lb","RHEA:38675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"arachidonate 8(S)-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R07053"],"synonyms":[{"name":"8(S)-lipoxygenase activity","type":"broad"},{"name":"8-lipoxygenase (S-type)","type":"broad"}],"termid":"GO:0036403"}


id: PBO:0085366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosylpyrophosphate amidotransferase (PRPPAT); catalyzes first step of the 'de novo' purine nucleotide biosynthetic pathway; also known as amidophosphoribosyltransferase","termid":"PBO:0085366"}


id: PBO:0084535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); this complex contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; homolog of Drosophila crooked neck protein; interacts with U1 snRNP proteins","termid":"PBO:0084535"}


id: FYPO:0005923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of the histone variant H2A.Z found associated with chromatin in subtelomeric regions is higher than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:21437270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level in chromatin","termid":"FYPO:0005893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased H2A.Z level at subtelomere","synonyms":[{"name":"H2A.Z accumulation at subtelomere","type":"exact"},{"name":"increased H2A.Z level at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased H2A.Z level at subtelomere during vegetative growth","type":"exact"},{"name":"increased H2A.Z level in chromatin at subtelomere","type":"exact"}],"termid":"FYPO:0005923"}


id: PATO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001147 absolute resistance value (obsolete PATO:0001147)","termid":"PATO:0001147"}


id: PBO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2009 protein","termid":"PBO:0001525"}


id: PBO:0089391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation regulator, HEAT repeat protein Gcn1","termid":"PBO:0089391"}


id: SO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal deletion whereby a chromosome generated by recombination between two inversions; has a deficiency at each end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_bipartite_deficiency","synonyms":[{"name":"inversion derived bipartite deficiency","type":"exact"}],"termid":"SO:0000461"}


id: GO:1900142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte apoptotic process.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell apoptotic process","termid":"GO:0034351"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte apoptotic process","termid":"GO:1900141"},{"relation_name":"negatively_regulates","term_name":"oligodendrocyte apoptotic process","termid":"GO:0097252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligodendrocyte apoptotic process","synonyms":[{"name":"down regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"down regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"down-regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"down-regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"downregulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"downregulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"inhibition of oligodendrocyte apoptosis","type":"narrow"},{"name":"inhibition of oligodendrocyte apoptotic process","type":"narrow"},{"name":"negative regulation of oligodendrocyte apoptosis","type":"narrow"}],"termid":"GO:1900142"}


id: MONDO:0040679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm derived from the transitional epithelium of the urinary tract (urinary bladder, ureter, urethra, or renal pelvis). It is frequently papillary.","definition_xrefs":["NCIT:C4030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant urinary system neoplasm","termid":"MONDO:0006295"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"},{"relation_name":"is_a","term_name":"urothelial neoplasm","termid":"MONDO:0024337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urothelial carcinoma","secondary_identifiers":["MEDGEN:760495","UMLS:C2145472","EFO:0008528"],"synonyms":[{"name":"Uroepithelial carcinoma","type":"exact"},{"name":"transitional cell car. -uroth.","type":"exact"},{"name":"transitional cell carcinoma of the urinary tract","type":"exact"},{"name":"transitional cell carcinoma of the urothelial tract","type":"exact"},{"name":"urothelial carcinoma","type":"exact"}],"termid":"MONDO:0040679","xrefs":{"Monarch":{"xref_id":"0040679"}}}


id: GO:0019381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide.","definition_xrefs":["GOC:jl","MetaCyc:PWY-5724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"atrazine metabolic process","termid":"GO:0018873"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrazine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:atr"],"synonyms":[{"name":"atrazine breakdown","type":"exact"},{"name":"atrazine catabolism","type":"exact"},{"name":"atrazine degradation","type":"exact"}],"termid":"GO:0019381"}


id: PBO:0069579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 853, pseudogene","termid":"PBO:0069579"}


id: PBO:0030716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glucosyltransferase_activity","termid":"PBO:0030716"}


id: FYPO:0001959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell during nitrogen starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cAMP level","termid":"FYPO:0001666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cAMP level during nitrogen starvation","synonyms":[{"name":"normal cAMP accumulation during nitrogen starvation","type":"related"},{"name":"normal cAMP level during nitrogen depletion","type":"exact"},{"name":"normal cAMP level during nitrogen deprivation","type":"exact"},{"name":"normal cellular cAMP level during nitrogen starvation","type":"exact"},{"name":"normal cyclic AMP level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001959"}


id: GO:0050453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 cob(I)alamin + H+ + NAD+ = 2 cob(II)alamin + NADH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cob(II)alamin reductase activity (obsolete GO:0050453)","synonyms":[{"name":"vitamin B12 reductase activity","type":"exact"},{"name":"vitamin B12 reduction","type":"related"}],"termid":"GO:0050453"}


id: PBO:0046332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOX1 antisense RNA 2","termid":"PBO:0046332"}


id: GO:0003776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete muscle motor activity (obsolete GO:0003776)","synonyms":[{"name":"muscle motor activity","type":"exact"}],"termid":"GO:0003776"}


id: MONDO:0015075
data:
  {"annotated_genes":["SJAG_03453","SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89112,89113,87670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A carcinoma arising from the thyroid gland. It is usually an adenocarcinoma and includes the following main subtypes: follicular, papillary, medullary, poorly differentiated, and anaplastic.","definition_xrefs":["NCIT:C4815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid cancer","termid":"MONDO:0002108"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19763","Orphanet:100088","UMLS:C0549473","DOID:3963","NANDO:2200074","HP:0002890","SCTID:448216007","MedDRA:10007476","MEDGEN:107811","EFO:0002892"],"synonyms":[{"name":"cancer of the thyroid","type":"broad"},{"name":"cancer of thyroid","type":"broad"},{"name":"carcinoma of the thyroid","type":"exact"},{"name":"carcinoma of the thyroid gland","type":"exact"},{"name":"carcinoma of thyroid","type":"exact"},{"name":"carcinoma of thyroid gland","type":"exact"},{"name":"head and neck cancer, thyroid","type":"broad"},{"name":"thyroid cancer","type":"broad"},{"name":"thyroid carcinoma","type":"exact"},{"name":"thyroid gland cancer","type":"broad"},{"name":"thyroid gland carcinoma","type":"exact"}],"termid":"MONDO:0015075","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0015075"}}}


id: GO:0016011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that includes alpha- and beta-dystroglycan, which are alternative products of the same gene; the laminin-binding component of the dystrophin-associated glycoprotein complex, providing a link between the subsarcolemmal cytoskeleton (in muscle cells) and the extracellular matrix. Alpha-dystroglycan is an extracellular protein binding to alpha-laminin and to beta-dystroglycan; beta-dystroglycan is a transmembrane protein which binds alpha-dystroglycan and dystrophin.","definition_xrefs":["PMID:15117830","PMID:16710609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"dystrophin-associated glycoprotein complex","termid":"GO:0016010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"dystroglycan complex","termid":"GO:0016011"}


id: PATO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is less than 180 degrees to another entity.","definition_xrefs":["maths.org:maths.org"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convex angle to","termid":"PATO:0001053"}


id: GO:0045088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of innate immune response","termid":"GO:0045088"}


id: PR:O13909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.01","synonyms":[{"name":"Spom972h-SPAC23C11.01","type":"exact"}],"termid":"PR:O13909"}


id: GO:0034064
data:
  {"annotated_genes":["SJAG_04009","SJAG_02723","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97018,108574,110750],"is_not":false,"summary":null,"term":"GO:0034064"}]},"cv_name":"cellular_component","definition":"A protein complex that contains the transcription factor Ste11 and the RNA binding protein Mei2; involved in regulation of conjugation in fission yeast.","definition_xrefs":["GOC:vw","PMID:17046992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_02723":null,"SJAG_04009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Tor2-Mei2-Ste11 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034064","terms_by_termid":{"GO:0034064":null}}


id: PBO:0046028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B subunit epsilon","termid":"PBO:0046028"}


id: PBO:0054063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1410","termid":"PBO:0054063"}


id: PBO:0058484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5591","termid":"PBO:0058484"}


id: FYPO:0001705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type). A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint","synonyms":[{"name":"normal DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation under non-stressed conditions","type":"narrow"},{"name":"normal mitotic DNA damage checkpoint during cellular response to DNA damage","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0001705"}


id: GO:0140827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and delivering zinc ions to a target protein.","definition_xrefs":["PMID:35584675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"zinc chaperone activity","synonyms":[{"name":"zinc carrier activity","type":"exact"}],"termid":"GO:0140827"}


id: GO:1904868
data:
  {"annotated_genes":["SJAG_04586","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66045,109870],"is_not":false,"summary":null,"term":"GO:1904868"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a telomerase catalytic core complex.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:BHF_telomere","GOC:rph","PMID:26586433","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomerase holoenzyme complex assembly","termid":"GO:1905323"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"telomerase catalytic core complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"TERT-TERC complex assembly","type":"related"},{"name":"TERT-TERC complex formation","type":"related"},{"name":"telomerase catalytic core complex formation","type":"exact"}],"termid":"GO:1904868","terms_by_termid":{"GO:1904868":null}}


id: PBO:0029971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0029971"}


id: MONDO:0010666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Miles-Carpenter syndrome (obsolete MONDO:0010666)","secondary_identifiers":["OMIM:309605"],"termid":"MONDO:0010666","xrefs":{"Monarch":{"xref_id":"0010666"}}}


id: FYPO:0001535
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular zinc level","synonyms":[{"name":"normal cellular zinc accumulation","type":"related"},{"name":"normal cellular zinc ion level","type":"exact"},{"name":"normal cellular zinc level during mitotic cell cycle","type":"related"},{"name":"normal cellular zinc level during vegetative growth","type":"exact"}],"termid":"FYPO:0001535"}


id: GO:0008867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactarate = 5-dehydro-4-deoxy-D-glucarate + H2O.","definition_xrefs":["RHEA:16005","EC:4.2.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"galactarate dehydratase activity","secondary_identifiers":["MetaCyc:GALACTARDEHYDRA-RXN","KEGG_REACTION:R05608"],"synonyms":[{"name":"D-galactarate hydro-lyase (5-dehydro-4-deoxy-D-glucarate-forming)","type":"related"},{"name":"D-galactarate hydro-lyase activity","type":"related"}],"termid":"GO:0008867"}


id: GO:1902422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of H2 (dihydrogen).","definition_xrefs":["PMID:20395274","GOC:TermGenie","PMID:20692761","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"hydrogen metabolic process","termid":"GO:1902421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen biosynthetic process","synonyms":[{"name":"H2 biosynthesis","type":"exact"},{"name":"dihydrogen synthesis","type":"exact"},{"name":"hydrogen anabolism","type":"exact"},{"name":"hydrogen biosynthesis","type":"exact"},{"name":"hydrogen formation","type":"exact"},{"name":"hydrogen generation","type":"exact"},{"name":"hydrogen production","type":"exact"},{"name":"hydrogen synthesis","type":"exact"},{"name":"molecular hydrogen biosynthesis","type":"exact"}],"termid":"GO:1902422"}


id: PBO:0079085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 2-1","termid":"PBO:0079085"}


id: MONDO:0022907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous sclerosis","termid":"MONDO:0022907","xrefs":{"Monarch":{"xref_id":"0022907"}}}


id: PBO:0011060
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator","termid":"PBO:0011060"}


id: PBO:0062044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 29","termid":"PBO:0062044"}


id: PBO:0091237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase-like and DUF1989 family protein, implicated in urea metabolism","termid":"PBO:0091237"}


id: PBO:0042053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 113","termid":"PBO:0042053"}


id: MONDO:0021197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease by cellular component affected (obsolete MONDO:0021197)","termid":"MONDO:0021197","xrefs":{"Monarch":{"xref_id":"0021197"}}}


id: PBO:0067119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 164, pseudogene","termid":"PBO:0067119"}


id: PBO:0082931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic and mitochondrial histidine tRNA synthetase; efficient mitochondrial localization requires both a presequence and an amino-terminal sequence; mutations in human ortholog HARS2 are associated with Perrault syndrome","termid":"PBO:0082931"}


id: PBO:0088099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uracil-DNA glycosylase; required for repair of uracil in DNA formed by spontaneous cytosine deamination; efficiently excises uracil from single-stranded DNA in vivo; not required for strand-specific mismatch repair; cell-cycle regulated, expressed in late G1; localizes to mitochondria and nucleus","termid":"PBO:0088099"}


id: MONDO:0009090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial non-syndromic sensorineural hearing loss","termid":"MONDO:0010779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"hearing loss, sensorineural, autosomal-mitochondrial type","secondary_identifiers":["MEDGEN:346566","UMLS:C1857332","MESH:C565637","DOID:0111752","GARD:18159","OMIM:221745"],"synonyms":[{"name":"deafness, sensorineural, autosomal-mitochondrial type","type":"narrow"}],"termid":"MONDO:0009090","xrefs":{"Monarch":{"xref_id":"0009090"}}}


id: PATO:0000070
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The number of entities of this type that are part of the whole organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"},{"relation_name":"reciprocal_of","term_name":"has number of","termid":"PATO:0001555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amount","secondary_identifiers":["PATO:0001169","PATO:0000053","PATO:0000071","PATO:0001226"],"synonyms":[{"name":"count","type":"exact"},{"name":"count in organism","type":"related"},{"name":"number","type":"related"},{"name":"presence","type":"related"},{"name":"presence or absence in organism","type":"exact"},{"name":"quantitative","type":"exact"}],"termid":"PATO:0000070"}


id: PBO:0044197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin F","termid":"PBO:0044197"}


id: PBO:0062443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 108 pseudogene","termid":"PBO:0062443"}


id: PBO:0077770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 6","termid":"PBO:0077770"}


id: PATO:0002628
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is borderline in it its effect or force as compared to baseline or normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borderline intensity","termid":"PATO:0002628"}


id: MONDO:0018012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tetanus (obsolete MONDO:0018012)","termid":"MONDO:0018012","xrefs":{"Monarch":{"xref_id":"0018012"}}}


id: GO:2000860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aldosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mineralocorticoid secretion","termid":"GO:2000857"},{"relation_name":"is_a","term_name":"regulation of aldosterone secretion","termid":"GO:2000858"},{"relation_name":"positively_regulates","term_name":"aldosterone secretion","termid":"GO:0035932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of aldosterone secretion","termid":"GO:2000860"}


id: GO:0070565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of DNA and protein located at the end of a linear chromosome that enables replication of the telomeric repeat sequences at the end of a linear chromosome.","definition_xrefs":["GOC:pde","PMID:19179534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"part_of","term_name":"chromosome, telomeric region","termid":"GO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"telomere-telomerase complex","termid":"GO:0070565"}


id: PBO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTC tricarboxylate transporter (predicted)","termid":"PBO:0002141"}


id: GO:0062172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lutein.","definition_xrefs":["PMID:24397433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"lutein metabolic process","termid":"GO:0062170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lutein catabolic process","synonyms":[{"name":"lutein breakdown","type":"exact"},{"name":"lutein catabolism","type":"exact"},{"name":"lutein degradation","type":"exact"}],"termid":"GO:0062172"}


id: PBO:0064353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase M20 domain containing 1","termid":"PBO:0064353"}


id: PBO:0036334
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human DLP1","termid":"PBO:0036334"}


id: PBO:0085134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for 60S ribosomal subunit biogenesis","termid":"PBO:0085134"}


id: PBO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D, Pld1","termid":"PBO:0000461"}


id: PBO:0076591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 12","termid":"PBO:0076591"}


id: PBO:0081877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 821","termid":"PBO:0081877"}


id: PBO:0070680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 51","termid":"PBO:0070680"}


id: MONDO:0019669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"achondrogenesis","termid":"MONDO:0019648"},{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hypochondrogenesis","secondary_identifiers":["MEDGEN:107448","GARD:16815","NANDO:2201346","MESH:C563007","UMLS:C0542428","Orphanet:93297","icd11.foundation:1494246635","DOID:0080044"],"termid":"MONDO:0019669","xrefs":{"Monarch":{"xref_id":"0019669"}}}


id: MONDO:0018703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated splenogonadal fusion","secondary_identifiers":["GARD:21903","Orphanet:457083"],"synonyms":[{"name":"SGF","type":"exact"}],"termid":"MONDO:0018703","xrefs":{"Monarch":{"xref_id":"0018703"}}}


id: GO:0048082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of the adult pattern of pigmentation in the cuticle of an organism.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cuticle pigmentation","termid":"GO:0048079"},{"relation_name":"regulates","term_name":"adult chitin-containing cuticle pigmentation","termid":"GO:0048085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adult chitin-containing cuticle pigmentation","termid":"GO:0048082"}


id: PBO:0067177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 234, pseudogene","termid":"PBO:0067177"}


id: MONDO:0022171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition characterized by the secretion of colored sweat, caused by the deposition of lipofuscin in the sweat glands. Usually chromhidrosis affects the apocrine glands, mainly on the face and underarms.","definition_xrefs":["Wikipedia:Chromhidrosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apocrine sweat gland disorder","termid":"MONDO:0024467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chromhidrosis","secondary_identifiers":["ICD9:705.89","MEDGEN:82667","UMLS:C0263473","icd11.foundation:864449620","SCTID:26147006","ICD10CM:L75.1"],"synonyms":[{"name":"chromhidrosis","type":"exact"},{"name":"secretion of colored sweat","type":"related"},{"name":"secretion of coloured sweat","type":"related"}],"termid":"MONDO:0022171","xrefs":{"Monarch":{"xref_id":"0022171"}}}


id: FYPO:0007755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle is shorter than normal during metaphase of meiosis I.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short meiotic spindle","termid":"FYPO:0000735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000120","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"short meiotic spindle during metaphase I","synonyms":[{"name":"short meiosis I spindle during metaphase","type":"exact"},{"name":"short spindle during meiotic metaphase I","type":"exact"},{"name":"short spindle during metaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007755"}


id: PBO:0027668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_cytoplasmic_microtubules_present_in_increased_numbers","termid":"PBO:0027668"}


id: PBO:0040016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 5","termid":"PBO:0040016"}


id: FYPO:0003106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that are shorter than normal, and that remain at a consistent length over successive generations.","definition_xrefs":["PMID:24013504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shortened telomeres during vegetative growth","termid":"FYPO:0002239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"stable shortened telomeres during vegetative growth","synonyms":[{"name":"stable decreased telomere length during vegetative growth","type":"exact"},{"name":"stable shortened telomeres during mitotic cell cycle","type":"related"},{"name":"stably shortened telomeres during vegetative growth","type":"exact"}],"termid":"FYPO:0003106"}


id: PBO:0026874
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_DNA_double-strand_break_resectioning","termid":"PBO:0026874"}


id: PBO:0053958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1265","termid":"PBO:0053958"}


id: GO:0019183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which chloride ions may pass in response to histamine binding to the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel complex","termid":"GO:0034707"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"histamine-gated chloride channel complex","termid":"GO:0019183"}


id: PBO:0040252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 9A","termid":"PBO:0040252"}


id: MONDO:0011297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nocturnal frontal lobe epilepsy that has material basis in variation in the chromosome region 15q24.","definition_xrefs":["DOID:0060683","PMID:9758605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-related hypermotor epilepsy","termid":"MONDO:0000030"},{"relation_name":"is_a","term_name":"autosomal dominant nocturnal frontal lobe epilepsy","termid":"MONDO:0020300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy 2","secondary_identifiers":["MESH:C566400","UMLS:C1864125","GARD:15352","OMIM:603204","MEDGEN:351053"],"synonyms":[{"name":"ENFL2","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy type 2","type":"exact"},{"name":"epilepsy, nocturnal frontal lobe, 2","type":"related"},{"name":"epilepsy, nocturnal frontal lobe, type 2","type":"exact"},{"name":"nocturnal frontal lobe epilepsy 2","type":"exact"}],"termid":"MONDO:0011297","xrefs":{"Monarch":{"xref_id":"0011297"}}}


id: PBO:0049109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 166 pseudogene","termid":"PBO:0049109"}


id: PBO:0029694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lobate_nuclear_envelope","termid":"PBO:0029694"}


id: MONDO:0010532
data:
  {"annotated_genes":["SJAG_00853"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88831],"is_not":false,"summary":null,"term":"MONDO:0010532"}]},"cv_name":"mondo","definition":"A rare form of spinal muscular atrophy characterized by the neonatal onset of severe hypotonia, areflexia, profound weakness, multiple congenital contractures, facial dysmorphic features (myopathic face with open, tent-shaped mouth), cryptorchidism, and mild skeletal abnormalities (i.e. kyphosis, scoliosis), that is often preceded by polyhydramnios and reduced fetal movements in utero and followed by bone fractures shortly after birth. SMAX2 patients often have a limited life span, often succumbing to the disease within 2 years, as muscle weakness is progressive and chest muscle involvement eventually leads to ventilatory insufficiency and respiratory failure.","definition_xrefs":["Orphanet:1145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"infantile-onset X-linked spinal muscular atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111827","OMIM:301830","GARD:8521","UMLS:C1844934","SCTID:719836007","MEDGEN:337123","MESH:C535380"],"synonyms":[{"name":"AMC, distal, X-linked","type":"related"},{"name":"SMAX2","type":"exact"},{"name":"X-linked distal arthrogryposis multiplex congenita","type":"exact"},{"name":"X-linked spinal muscular atrophy type 2","type":"exact"},{"name":"arthrogryposis multiplex congenita, distal, X-linked","type":"related"},{"name":"arthrogryposis, X-linked, type 1","type":"related"},{"name":"spinal muscular atrophy with arthrogryposis","type":"exact"},{"name":"spinal muscular atrophy, X-linked 2","type":"related"},{"name":"spinal muscular atrophy, X-linked 2, infantile, X-linked recessive","type":"exact"},{"name":"spinal muscular atrophy, X-linked lethal infantile","type":"related"},{"name":"spinal muscular atrophy, X-linked type 2","type":"exact"},{"name":"spinal muscular atrophy, infantile X-linked","type":"related"}],"termid":"MONDO:0010532","terms_by_termid":{"MONDO:0010532":null},"xrefs":{"Monarch":{"xref_id":"0010532"}}}


id: FYPO:0001871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype in which cells adhere to other cells of compatible mating type more strongly or to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion","termid":"FYPO:0001872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased agglutination","synonyms":[{"name":"increased agglutination involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0001871"}


id: PR:O74503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spp27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream activation factor subunit spp27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.17","synonyms":[{"name":"Spom972h-spp27","type":"exact"},{"name":"p27 (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"p30 (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"upstream activation factor 27 KDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"upstream activation factor 30 KDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"upstream activation factor subunit uaf30 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74503"}


id: GO:0038201
data:
  {"annotated_genes":["SJAG_01509","SJAG_04460","SJAG_03067","SJAG_02723","SJAG_01020","SJAG_04987","SJAG_00167","SJAG_00117","SJAG_01320","SJAG_01703"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108575,70116,80119,114992,80609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031931"},{"annotations":[57398,101256,60645,78873,79328,80610,74350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031932"}]},"cv_name":"cellular_component","definition":"A protein complex that contains at least TOR (target of rapamycin) in complex with other signaling components. Mediates the phosphorylation and activation of downstream signaling components including PKB (AKT) or S6K.","definition_xrefs":["Wikipedia:MTORC2","Wikipedia:MTORC1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00167":null,"SJAG_01020":null,"SJAG_01320":null,"SJAG_01509":null,"SJAG_01703":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_04460":null,"SJAG_04987":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TOR complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"TOR signaling complex","type":"exact"},{"name":"mTOR complex","type":"narrow"},{"name":"target of rapamycin complex","type":"exact"}],"termid":"GO:0038201","terms_by_termid":{"GO:0031931":null,"GO:0031932":null}}


id: PBO:0029854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_and_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0029854"}


id: PBO:0088823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp3","termid":"PBO:0088823"}


id: PBO:0066452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 4, pseudogene","termid":"PBO:0066452"}


id: MONDO:0022653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy due to anthracyclines","secondary_identifiers":["UMLS:C5437452","MEDGEN:1755373","GARD:1107"],"termid":"MONDO:0022653","xrefs":{"Monarch":{"xref_id":"0022653"}}}


id: FYPO:0004566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to caffeine during the second meiotic nuclear division. Cells stop growing (and may die) at a concentration of caffeine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to caffeine during meiosis II","synonyms":[{"name":"hypersensitive to caffeine during meiosis II","type":"exact"},{"name":"sensitive to caffeine during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004566"}


id: FYPO:0002231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are curved along the long axis. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, curved cells (obsolete FYPO:0002231)","synonyms":[{"name":"inviable microcolony, curved vegetative cells","type":"exact"}],"termid":"FYPO:0002231"}


id: PBO:0064741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 77","termid":"PBO:0064741"}


id: MONDO:0006462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma primarily involving the thyroid gland.","definition_xrefs":["NCIT:C6046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"},{"relation_name":"is_a","term_name":"thyroid lymphoma","termid":"MONDO:0019962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thyroid gland diffuse large B-cell lymphoma","secondary_identifiers":["UMLS:C1336749","MEDGEN:234429","EFO:1000587"],"synonyms":[{"name":"diffuse large B-cell lymphoma of the thyroid","type":"exact"},{"name":"diffuse large B-cell lymphoma of the thyroid gland","type":"exact"},{"name":"diffuse large B-cell lymphoma of thyroid","type":"exact"},{"name":"diffuse large B-cell lymphoma of thyroid gland","type":"exact"},{"name":"primary thyroid gland diffuse large B-cell lymphoma","type":"exact"},{"name":"thyroid diffuse large B-cell lymphoma","type":"exact"},{"name":"thyroid gland diffuse large B-cell lymphoma","type":"exact"}],"termid":"MONDO:0006462","xrefs":{"Monarch":{"xref_id":"0006462"}}}


id: PR:O60093
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ber1 gene.","definition_xrefs":["UniProtKB:O60093","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.13","synonyms":[{"name":"Spom972h-ber1","type":"exact"}],"termid":"PR:O60093"}


id: SO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase III binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter","synonyms":[{"name":"RNA polymerase C promoter","type":"exact"},{"name":"RNApol III promoter","type":"exact"},{"name":"pol III promoter","type":"exact"},{"name":"polymerase III promoter","type":"exact"}],"termid":"SO:0000171"}


id: PBO:0083302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 5' end of essential NBP1/YLR457C gene required for mitosis","termid":"PBO:0083302"}


id: PBO:0069366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 626, pseudogene","termid":"PBO:0069366"}


id: MONDO:0007603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Felty syndrome (FS), also known as ''super rheumatoid'' disease, is a severe form of rheumatoid arthritis (RA), characterized by a triad of RA, splenomegaly and neutropenia, resulting in susceptibility to bacterial infections.","definition_xrefs":["Orphanet:47612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatoid arthritis","termid":"MONDO:0008383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Felty syndrome","secondary_identifiers":["MedDRA:10016386","MESH:D005258","SCTID:57160007","GARD:8234","NCIT:C84712","DOID:11042","ICD9:714.1","MEDGEN:4674","EFO:0007269","OMIM:134750","UMLS:C0015773"],"synonyms":[{"name":"Felty syndrome","type":"exact"},{"name":"Felty's syndrome","type":"exact"},{"name":"familial Felty's syndrome","type":"related"},{"name":"rheumatoid arthritis with splenoadenomegaly and leukopenia","type":"exact"},{"name":"rheumatoid arthritis, splenomegaly and neutropenia","type":"related"},{"name":"splenomegaly-neutropenia-rheumatoid arthritis syndrome","type":"exact"}],"termid":"MONDO:0007603","xrefs":{"Monarch":{"xref_id":"0007603"}}}


id: MONDO:0004130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anal squamous cell carcinoma characterized by the presence of malignant cells with hyperchromatic nuclei and peripheral nuclear palisading.","definition_xrefs":["NCIT:C8256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basaloid squamous cell carcinoma","termid":"MONDO:0003486"},{"relation_name":"is_a","term_name":"anal squamous cell carcinoma","termid":"MONDO:0006082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anus basaloid carcinoma","secondary_identifiers":["UMLS:C0280470","DOID:7174","MEDGEN:79125"],"synonyms":[{"name":"anal basaloid carcinoma","type":"exact"},{"name":"anus basaloid squamous cell carcinoma","type":"exact"},{"name":"basaloid carcinoma of anus","type":"exact"},{"name":"basaloid carcinoma of the anus","type":"exact"}],"termid":"MONDO:0004130","xrefs":{"Monarch":{"xref_id":"0004130"}}}


id: PBO:0044679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage induced apoptosis suppressor","termid":"PBO:0044679"}


id: PR:O94397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgf73 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA-associated factor 73 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.04c","synonyms":[{"name":"Spom972h-sgf73","type":"exact"}],"termid":"PR:O94397"}


id: GO:0060536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cartilage are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage morphogenesis","termid":"GO:0060536"}


id: PATO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A turgor which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"turgor","termid":"PATO:0001620"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased turgor","synonyms":[{"name":"high turgor","type":"exact"}],"termid":"PATO:0001622"}


id: PBO:0113541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein sorting (VPS) protein; required for cytoplasm to vacuole targeting of proteins; targeted to vacuole via AP-3 pathway; VPS62 has a paralog, TDA6, that arose from the whole genome duplication","termid":"PBO:0113541"}


id: GO:0072195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"kidney smooth muscle tissue development","termid":"GO:0072194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}


id: GO:0072524
data:
  {"annotated_genes":["SJAG_00605","SJAG_02462","SJAG_04048","SJAG_00501","SJAG_03660","SJAG_06621","SJAG_02785","SJAG_03096","SJAG_02618","SJAG_02696","SJAG_00027","SJAG_00633","SJAG_03903","SJAG_00957","SJAG_01566","SJAG_01753","SJAG_00461","SJAG_05314","SJAG_00685","SJAG_00070","SJAG_04263","SJAG_04362","SJAG_01383","SJAG_01500","SJAG_00714","SJAG_02009","SJAG_02853","SJAG_02191","SJAG_04192","SJAG_02135","SJAG_01582","SJAG_01543","SJAG_01881","SJAG_03669","SJAG_02107","SJAG_02297","SJAG_04334","SJAG_03298","SJAG_03946","SJAG_02945","SJAG_01310","SJAG_03373","SJAG_02148","SJAG_02889","SJAG_06622","SJAG_03306","SJAG_02154","SJAG_01824","SJAG_03828","SJAG_00707","SJAG_02796","SJAG_00522","SJAG_00283","SJAG_02369","SJAG_00691","SJAG_03174","SJAG_03934","SJAG_00252","SJAG_05230","SJAG_04467","SJAG_04495","SJAG_00839","SJAG_03091","SJAG_04693","SJAG_03852"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[107374,111343,118333,74188,79614,107375,111340,111342,107746,96380,111341,105284,107376,99868,100139,107745,111344,105543,111345,111346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[90422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[118542,98434,89653,113775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043490"},{"annotations":[76515,79425,115057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[81869,72547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[74146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[58735,68110,70726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019674"},{"annotations":[74147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[96969,96970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006735"},{"annotations":[79735,72857,81651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[74148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[75612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006739"},{"annotations":[74840,77909],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[105336,91130,67471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046496"},{"annotations":[71648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[115058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[111567,90840,92477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[71649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[69659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006098"},{"annotations":[75530,76291,74879,110367,106262],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[98854,100060,98764,82161,74814],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0009051"},{"annotations":[91516],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[76994,80008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[116373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[65162,77358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[113787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[89534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[65160,77360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[80157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[71751],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[77908],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"},{"annotations":[102760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"},{"annotations":[74212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042816"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyridine-containing compound, i.e. any compound that contains pyridine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":65,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00070":null,"SJAG_00252":null,"SJAG_00283":null,"SJAG_00461":null,"SJAG_00501":null,"SJAG_00522":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_00714":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01310":null,"SJAG_01383":null,"SJAG_01500":null,"SJAG_01543":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_01753":null,"SJAG_01824":null,"SJAG_01881":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02297":null,"SJAG_02369":null,"SJAG_02462":null,"SJAG_02618":null,"SJAG_02696":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02853":null,"SJAG_02889":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03096":null,"SJAG_03174":null,"SJAG_03298":null,"SJAG_03306":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03669":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03934":null,"SJAG_03946":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04263":null,"SJAG_04334":null,"SJAG_04362":null,"SJAG_04467":null,"SJAG_04495":null,"SJAG_04693":null,"SJAG_05230":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyridine-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyridine and derivative metabolic process","type":"exact"},{"name":"pyridine-containing compound metabolism","type":"exact"}],"termid":"GO:0072524","terms_by_termid":{"GO:0006098":null,"GO:0006110":null,"GO:0006734":null,"GO:0006735":null,"GO:0006739":null,"GO:0006741":null,"GO:0006742":null,"GO:0008614":null,"GO:0008615":null,"GO:0009051":null,"GO:0009052":null,"GO:0009435":null,"GO:0009443":null,"GO:0010144":null,"GO:0019358":null,"GO:0019674":null,"GO:0019677":null,"GO:0034355":null,"GO:0036001":null,"GO:0042816":null,"GO:0042818":null,"GO:0042820":null,"GO:0042821":null,"GO:0042823":null,"GO:0043456":null,"GO:0043490":null,"GO:0045820":null,"GO:0046495":null,"GO:0046496":null,"GO:0061613":null,"GO:0061621":null,"GO:0071590":null,"GO:0071592":null,"GO:1905857":null}}


id: PBO:0109402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 29, pseudogene","termid":"PBO:0109402"}


id: MONDO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma confined to the mucosa or mucosa and submucosa of the gastric wall. The regional lymph nodes may or may not be involved. It usually occurs in the lesser curvature. The 5-year survival rate following resection is between 80 percent and 95 percent, and remains high even when lymph node metastases are present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric adenocarcinoma","termid":"MONDO:0005036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"microinvasive gastric cancer","secondary_identifiers":["DOID:10541","MEDGEN:138098","UMLS:C0349530","SCTID:276809004","NCIT:C27131"],"synonyms":[{"name":"EGC","type":"exact"},{"name":"early gastric cancer","type":"exact"},{"name":"superficial gastric cancer","type":"exact"},{"name":"superficial spreading gastric cancer","type":"exact"},{"name":"surface gastric cancer","type":"exact"}],"termid":"MONDO:0001060","xrefs":{"Monarch":{"xref_id":"0001060"}}}


id: GO:0031091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle found in blood platelets, which is unique in that it exhibits further compartmentalization and acquires its protein content via two distinct mechanisms: (1) biosynthesis predominantly at the megakaryocyte (MK) level (with some vestigial platelet synthesis) (e.g. platelet factor 4) and (2) endocytosis and pinocytosis at both the MK and circulating platelet levels (e.g. fibrinogen (Fg) and IgG).","definition_xrefs":["PMID:8467233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"platelet alpha granule","secondary_identifiers":["Wikipedia:Platelet_alpha-granule"],"synonyms":[{"name":"platelet alpha-granule","type":"exact"}],"termid":"GO:0031091"}


id: PBO:0029468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glucose_binding","termid":"PBO:0029468"}


id: PBO:0076736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 10 like 2, pseudogene","termid":"PBO:0076736"}


id: GO:0062116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chloroplast-derived plastid in which the solid form of phenol is stored.","definition_xrefs":["PMID:24683183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"phenyloplast","termid":"GO:0062116"}


id: PBO:0045501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoglein 4","termid":"PBO:0045501"}


id: FYPO:0006239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to centromere","synonyms":[{"name":"increased protein localisation to centromere","type":"exact"},{"name":"increased protein localisation to chromosome, centromeric region","type":"exact"},{"name":"increased protein localization to chromosome, centric region","type":"exact"},{"name":"increased protein localization to chromosome, centromeric region","type":"exact"}],"termid":"FYPO:0006239"}


id: PBO:0034190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-provides_nutrients_for","termid":"PBO:0034190"}


id: MONDO:0004141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanomatosis","secondary_identifiers":["MEDGEN:235317","DOID:7206","UMLS:C1334691","NCIT:C9499"],"synonyms":[{"name":"melanomatosis","type":"exact"}],"termid":"MONDO:0004141","xrefs":{"Monarch":{"xref_id":"0004141"}}}


id: MONDO:1012695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in cattle due to a mutation in the PRKG2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, PRKG2-related, cattle","secondary_identifiers":["OMIA:001485-9913"],"termid":"MONDO:1012695","xrefs":{"Monarch":{"xref_id":"1012695"}}}


id: GO:0141066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host extracellular matrix.","definition_xrefs":["PMID:11982763","PMID:25865874","PMID:2404867","PMID:21115719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host extracellular matrix","synonyms":[{"name":"disruption of host extracellular matrix","type":"broad"}],"termid":"GO:0141066"}


id: GO:0052159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the induced systemic resistance in the host organism; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host induced systemic resistance","secondary_identifiers":["GO:0052298"],"synonyms":[{"name":"modulation by organism of induced systemic resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of induced systemic resistance in host","type":"exact"},{"name":"perturbation of host induced systemic resistance","type":"exact"}],"termid":"GO:0052159"}


id: PBO:0003973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/transcription factor TFIID complex subunit Taf10","termid":"PBO:0003973"}


id: GO:0046977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TAP protein, transporter associated with antigen processing protein. TAP protein is a heterodimeric peptide transporter consisting of the subunits TAP1 and TAP2.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"TAP binding","termid":"GO:0046977"}


id: PBO:0056957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 19b-2","termid":"PBO:0056957"}


id: PBO:0055637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3076","termid":"PBO:0055637"}


id: PR:O94680
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- plh1 gene.","definition_xrefs":["UniProtKB:O94680","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid:diacylglycerol acyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.14","synonyms":[{"name":"PDAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-plh1","type":"exact"},{"name":"pombe LRO1 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94680"}


id: GO:0009833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of cellulose and pectin-containing cell walls that form adjacent to the middle lamella following cell division and during cell expansion. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:lr","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0007049","GO:0000281","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"plant-type primary cell wall biogenesis","synonyms":[{"name":"cellulose and pectin-containing primary cell wall biogenesis","type":"exact"},{"name":"primary cell wall anabolism","type":"broad"},{"name":"primary cell wall biogenesis","type":"exact"},{"name":"primary cell wall biosynthetic process","type":"broad"},{"name":"primary cell wall formation","type":"broad"},{"name":"primary cell wall synthesis","type":"broad"}],"termid":"GO:0009833"}


id: PBO:0064708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 44","termid":"PBO:0064708"}


id: PBO:0040484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7","termid":"PBO:0040484"}


id: PBO:0074014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 5","termid":"PBO:0074014"}


id: PBO:0077893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK binding protein pseudogene 2","termid":"PBO:0077893"}


id: GO:1902726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of satellite cell differentiation.","definition_xrefs":["GO_REF:0000058","PMID:23212449","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle cell differentiation","termid":"GO:2001016"},{"relation_name":"positively_regulates","term_name":"skeletal muscle satellite cell differentiation","termid":"GO:0014816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle satellite cell differentiation","synonyms":[{"name":"activation of satellite cell differentiation","type":"narrow"},{"name":"up regulation of satellite cell differentiation","type":"exact"},{"name":"up-regulation of satellite cell differentiation","type":"exact"},{"name":"upregulation of satellite cell differentiation","type":"exact"}],"termid":"GO:1902726"}


id: GO:0043407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of MAP kinase activity.","definition_xrefs":["GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAP kinase activity","termid":"GO:0043405"},{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of MAP kinase activity","synonyms":[{"name":"down regulation of MAPK activity","type":"exact"},{"name":"down-regulation of MAPK activity","type":"exact"},{"name":"downregulation of MAPK activity","type":"exact"},{"name":"inhibition of MAPK activity","type":"narrow"},{"name":"negative regulation of mitogen activated protein kinase activity","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase activity","type":"exact"}],"termid":"GO:0043407"}


id: PBO:0034332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-2D_boundary_of","termid":"PBO:0034332"}


id: PBO:0060842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament light pseudogene 1","termid":"PBO:0060842"}


id: GO:1905179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle tissue regeneration.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:23222520","GOC:rph","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue regeneration","termid":"GO:1905178"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle tissue regeneration","termid":"GO:0061026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle tissue regeneration","synonyms":[{"name":"down regulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"down-regulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"downregulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"inhibition of cardiac muscle tissue regeneration","type":"narrow"}],"termid":"GO:1905179"}


id: PBO:0073594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature homeobox","termid":"PBO:0073594"}


id: GO:0061297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the mesonephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesonephros development","termid":"GO:0061213"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:0061295"},{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072041"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis","termid":"GO:0061235"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","synonyms":[{"name":"positive regulation of mesenchymal stem cell apoptosis involved in mesonephric nephron morphogenesis","type":"narrow"},{"name":"positive regulation of mesenchymal stem cell apoptotic process involved in mesonephric nephron morphogenesis","type":"exact"}],"termid":"GO:0061297"}


id: PBO:0017794
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDC14A","termid":"PBO:0017794"}


id: GO:2001036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tongue muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle fiber differentiation","termid":"GO:1902810"},{"relation_name":"is_a","term_name":"regulation of tongue muscle cell differentiation","termid":"GO:2001035"},{"relation_name":"negatively_regulates","term_name":"tongue muscle cell differentiation","termid":"GO:0035981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tongue muscle cell differentiation","termid":"GO:2001036"}


id: PBO:0041250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 162","termid":"PBO:0041250"}


id: PATO:0001955
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being narrowly triangular, wider at the apex and tapering toward the base.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cuneate","synonyms":[{"name":"wedge-shaped","type":"exact"}],"termid":"PATO:0001955"}


id: MONDO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Saldino-Noonan syndrome (obsolete MONDO:0000353)","termid":"MONDO:0000353","xrefs":{"Monarch":{"xref_id":"0000353"}}}


id: MONDO:0009549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe early childhood onset retinal dystrophy (SECORD) is an inherited retinal dystrophy, characterized by a severe congenital night blindness, progressive retinal dystrophy and nystagmus. Best corrected visual acuity can reach 0.3 in the first decade of life and can pertain well into the second decade of life. Blindness is often complete by the age of 30 years. An overlap with Leber congenital amaurosis (LCA) occurs when patients are characterized by their visual acuity and panretinal dystrophy.","definition_xrefs":["Orphanet:364055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Stargardt disease","termid":"MONDO:0019353"},{"relation_name":"is_a","term_name":"ABCA4-related retinopathy","termid":"MONDO:0800406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"severe early-childhood-onset retinal dystrophy","secondary_identifiers":["SCTID:716663009","OMIM:248200","MEDGEN:383691","GARD:21565","ICD10CM:H35.5","UMLS:C1855465"],"synonyms":[{"name":"EOSRD","type":"exact"},{"name":"SECORD","type":"exact"},{"name":"STGD1","type":"related"},{"name":"Stargardt disease 1","type":"related"},{"name":"Stargardt disease type 1","type":"exact"},{"name":"Stgd","type":"related"},{"name":"early-onset severe retinal dystrophy","type":"exact"},{"name":"fundus flavimaculatus","type":"related"},{"name":"macular Degeneration, juvenile","type":"related"},{"name":"macular dystrophy with flecks, type 1","type":"related"},{"name":"retinal dystrophy, early-onset severe","type":"related"}],"termid":"MONDO:0009549","xrefs":{"Monarch":{"xref_id":"0009549"}}}


id: GO:0033315
data:
  {"annotated_genes":["SJAG_04287","SJAG_02771","SJAG_00364"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93263,108543,118040],"is_not":false,"summary":null,"term":"GO:0033315"}]},"cv_name":"biological_process","definition":"A signal transduction process that controls the G2/M1 transition of the meiotic cell cycle and prevents the initiation of nuclear division until DNA replication is complete.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication checkpoint signaling","termid":"GO:0000076"},{"relation_name":"is_a","term_name":"meiotic DNA integrity checkpoint signaling","termid":"GO:0044778"},{"relation_name":"is_a","term_name":"negative regulation of G2/MI transition of meiotic cell cycle","termid":"GO:0110031"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02771":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"meiotic G2/MI DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072440"],"synonyms":[{"name":"meiotic G2/MI DNA replication checkpoint","type":"exact"},{"name":"meiotic cell cycle DNA replication checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic DNA replication checkpoint","type":"exact"}],"termid":"GO:0033315","terms_by_termid":{"GO:0033315":null}}


id: PATO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Handedness where the organism exhibits no overall dominance in the use of right or left hand or foot in the performance of tasks that require one hand or foot or a dominant hand or foot.","definition_xrefs":["birnlex:2042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"handedness","termid":"PATO:0002201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ambidextrous handedness","termid":"PATO:0002204"}


id: MONDO:0044690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare ophthalmic disorder characterized by idiopathic orbital inflammation in which the specific target tissue is the optic nerve sheath. Patients typically present with ocular pain, pain on eye movement, visual symptoms with loss of vision progressing over several weeks, dyschromatopsia, and variable visual field defects. Orbital signs and symptoms may be present and include ptosis, ophthalmoplegia, and exophthalmos. Optic disk edema is observed in most cases. The condition is usually unilateral.","definition_xrefs":["Orphanet:499107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune/inflammatory optic neuropathy","termid":"MONDO:0044685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"optic perineuritis","secondary_identifiers":["UMLS:C4076165","MEDGEN:881493","SCTID:713417000","GARD:22041","icd11.foundation:349248275"],"synonyms":[{"name":"OPN","type":"exact"}],"termid":"MONDO:0044690","xrefs":{"Monarch":{"xref_id":"0044690"}}}


id: MONDO:0006898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the tissues around a joint. (Dorland, 27th ed)","definition_xrefs":["MESH:D010489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bursitis","termid":"MONDO:0002471"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periarthritis","secondary_identifiers":["SCTID:50921008","DOID:2964","MEDGEN:45397","UMLS:C0031037","MedDRA:10034464","EFO:1001097"],"termid":"MONDO:0006898","xrefs":{"Monarch":{"xref_id":"0006898"}}}


id: MONDO:0016089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease","termid":"MONDO:0009499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002561","MONDO:0002525","MONDO:0005066","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"infantile Krabbe disease","secondary_identifiers":["MEDGEN:148270","Orphanet:206436","NANDO:1200075","GARD:20343","NANDO:2201216","SCTID:238030005","icd11.foundation:999546344","UMLS:C0751273"],"synonyms":[{"name":"Krabbe disease, classic form","type":"exact"},{"name":"Krabbe disease, early-onset","type":"exact"},{"name":"early onset Krabbe disease","type":"exact"},{"name":"early symptomatic Krabbe disease","type":"exact"},{"name":"early-onset Krabbe disease","type":"exact"},{"name":"infantile onset Krabbe disease","type":"exact"},{"name":"infantile-onset Krabbe disease","type":"exact"}],"termid":"MONDO:0016089","xrefs":{"Monarch":{"xref_id":"0016089"}}}


id: MONDO:1012398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"segmental axonopathy, non-human animal","termid":"MONDO:1011882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"segmental axonopathy, sheep","secondary_identifiers":["OMIA:001492-9940"],"termid":"MONDO:1012398","xrefs":{"Monarch":{"xref_id":"1012398"}}}


id: MONDO:0012413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndromic microphthalmia, type 5 is characterized by the association of a range of ocular anomalies (anophthalmia, microphthalmia and retinal abnormalities) with variable developmental delay and central nervous system malformations.","definition_xrefs":["Orphanet:178364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"syndromic microphthalmia type 5","secondary_identifiers":["OMIM:610125","DOID:0111806","UMLS:C1864690","GARD:3692","MESH:C566441","SCTID:718761007","MEDGEN:350491"],"synonyms":[{"name":"MCOPS5","type":"exact"},{"name":"OTX2 syndromic microphthalmia","type":"exact"},{"name":"OTX2-related eye disorders","type":"related"},{"name":"microphthalmia syndromic 5","type":"related"},{"name":"microphthalmia, syndromic 5","type":"related"},{"name":"microphthalmia, syndromic type 5","type":"exact"},{"name":"retinal dystrophy, early-onset, with or without pituitary dysfunction","type":"related"},{"name":"syndromic microphthalmia caused by mutation in OTX2","type":"exact"},{"name":"syndromic microphthalmia type 5","type":"exact"},{"name":"syndromic microphthalmia/anophthalmia due to OTX2 mutation","type":"exact"}],"termid":"MONDO:0012413","xrefs":{"Monarch":{"xref_id":"0012413"}}}


id: PBO:0080003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 12","termid":"PBO:0080003"}


id: MONDO:0012081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The 15q11-q13 microduplication (dup15q11-q13) syndrome is characterized by neurobehavioral disorders, hypotonia, cognitive deficit, language delay and seizures. Prevalence is unknown.","definition_xrefs":["Orphanet:238446"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 15","termid":"MONDO:0016965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15q11q13 microduplication syndrome","secondary_identifiers":["SCTID:719427001","UMLS:C2675336","GARD:17172","MEDGEN:390767","NCIT:C126692","OMIM:608636"],"synonyms":[{"name":"15q11-q13 duplication syndrome","type":"exact"},{"name":"15q11-q13 microduplication syndrome","type":"exact"},{"name":"15q11q13 duplication syndrome","type":"exact"},{"name":"Duplication 15Q11-q13 syndrome","type":"related"},{"name":"autism susceptibility 4","type":"exact"},{"name":"autism, susceptibility to, 4","type":"related"},{"name":"chromosome 15Q11.2 Duplication syndrome","type":"related"},{"name":"chromosome 15q11-q13 DUPLICATION syndrome","type":"related"},{"name":"dup(15)(q11q13)","type":"exact"},{"name":"trisomy 15q11-q13","type":"exact"},{"name":"trisomy 15q11q13","type":"exact"}],"termid":"MONDO:0012081","xrefs":{"Monarch":{"xref_id":"0012081"}}}


id: FYPO:0001932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to hydroxyurea is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular response to hydroxyurea","synonyms":[{"name":"abnormal cellular response to HU","type":"exact"},{"name":"abnormal cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0001932"}


id: PBO:0060026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 14","termid":"PBO:0060026"}


id: PBO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-end-recognizing protein (predicted)","termid":"PBO:0002186"}


id: PBO:0059558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1B","termid":"PBO:0059558"}


id: FYPO:0004839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the localization of a protein to the plasma membrane is abolished when the cell is subject to glucose starvation, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose starvation","synonyms":[{"name":"abolished protein localisation to plasma membrane, with protein mislocalised to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization in plasma membrane, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization to cell membrane, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose depletion","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose deprivation","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose limitation","type":"related"},{"name":"protein localization to plasma membrane abolished, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"}],"termid":"FYPO:0004839"}


id: _global:increased_in_magnitude_relative_to
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"different_in_magnitude_relative_to","termid":"_global:different_in_magnitude_relative_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_in_magnitude_relative_to","termid":"_global:increased_in_magnitude_relative_to"}


id: PBO:0040700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 1","termid":"PBO:0040700"}


id: GO:0050948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of early stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of melanocyte differentiation","termid":"GO:0045636"},{"relation_name":"is_a","term_name":"regulation of early stripe melanocyte differentiation","termid":"GO:0050939"},{"relation_name":"positively_regulates","term_name":"early stripe melanocyte differentiation","termid":"GO:0050933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of early stripe melanocyte differentiation","synonyms":[{"name":"activation of early stripe melanocyte differentiation","type":"narrow"},{"name":"positive regulation of early stripe melanophore differentiation","type":"exact"},{"name":"stimulation of early stripe melanocyte differentiation","type":"narrow"},{"name":"up regulation of early stripe melanocyte differentiation","type":"exact"},{"name":"up-regulation of early stripe melanocyte differentiation","type":"exact"},{"name":"upregulation of early stripe melanocyte differentiation","type":"exact"}],"termid":"GO:0050948"}


id: PBO:0028114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snoRNA_guided_rRNA_2'-O-methylation_abolished_at_specific_site","termid":"PBO:0028114"}


id: PBO:0060290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 6B","termid":"PBO:0060290"}


id: MONDO:0013235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial pancreatic carcinoma in which the cause of the disease is a mutation in the BRCA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial pancreatic carcinoma","termid":"MONDO:0015278"},{"relation_name":"is_a","term_name":"BRCA2-related cancer predisposition","termid":"MONDO:0700269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic cancer, susceptibility to, 2","secondary_identifiers":["OMIM:613347","UMLS:C3150546","MEDGEN:461896"],"synonyms":[{"name":"BRCA2 familial pancreatic carcinoma","type":"exact"},{"name":"Pnca2","type":"related"},{"name":"familial pancreatic carcinoma caused by mutation in BRCA2","type":"exact"},{"name":"pancreatic cancer 2","type":"exact"},{"name":"pancreatic cancer, susceptibility to, 2","type":"exact"},{"name":"pancreatic cancer, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to pancreatic cancer 2","type":"related"}],"termid":"MONDO:0013235","xrefs":{"Monarch":{"xref_id":"0013235"}}}


id: PBO:0086125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for function of the Sit4p protein phosphatase; forms a complex with Sit4p; member of a family of similar proteins including Sap4p, Sap185p, and Sap190p; protein abundance increases in response to DNA replication stress; SAP155 has a paralog, SAP4, that arose from the whole genome duplication","termid":"PBO:0086125"}


id: MONDO:0012770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 15","secondary_identifiers":["GARD:15538","MESH:C567447","UMLS:C2677771","MEDGEN:437036","OMIM:611959"],"synonyms":[{"name":"HPC15","type":"exact"},{"name":"prostate cancer, hereditary, 15","type":"exact"}],"termid":"MONDO:0012770","xrefs":{"Monarch":{"xref_id":"0012770"}}}


id: PBO:0082232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; specificity for isomaltose, maltose, and palatinose, but not alpha-methylglucoside; most distant member of the IMA isomaltase family, but with similar catalytic properties as Ima1p and Ima2p; not required for isomaltose utilization, but Ima5p overexpression allows the ima1 null mutant to grow on isomaltose; can cleave alpha-1,3 linkage of nigerose and turanose and alpha-1,5 linkage of leucrose and is very sensitive to temperature in vitro","termid":"PBO:0082232"}


id: PBO:0047631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fission, mitochondrial 1","termid":"PBO:0047631"}


id: PBO:0062963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 6","termid":"PBO:0062963"}


id: MONDO:0002094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete conjunctival squamous cell carcinoma (obsolete MONDO:0002094)","termid":"MONDO:0002094","xrefs":{"Monarch":{"xref_id":"0002094"}}}


id: GO:0033918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,4-beta-D-linkages between D-galactose 4-sulfate and 3,6-anhydro-D-galactose in kappa-carrageenans.","definition_xrefs":["EC:3.2.1.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"kappa-carrageenase activity","secondary_identifiers":["MetaCyc:3.2.1.83-RXN"],"synonyms":[{"name":"kappa-carrageenan 4-beta-D-glycanohydrolase (configuration-retaining) activity","type":"related"},{"name":"kappa-carrageenan 4-beta-D-glycanohydrolase activity","type":"related"}],"termid":"GO:0033918"}


id: PBO:0044659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 2","termid":"PBO:0044659"}


id: GO:0106019
data:
  {"annotated_genes":["SJAG_00063","SJAG_03375","SJAG_04545"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77192,75614,76750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004439"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol phosphate + phosphate.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol bisphosphate phosphatase activity","termid":"GO:0034593"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_03375":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0106019","terms_by_termid":{"GO:0004439":null}}


id: GO:0052359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of glucan in other organism involved in symbiotic interaction (obsolete GO:0052359)","synonyms":[{"name":"catabolism by organism of glucan in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052359"}


id: PBO:0044544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein","termid":"PBO:0044544"}


id: PBO:0084307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron transporter of the mitochondrial carrier family; mediates Fe2+ transport across the inner mitochondrial membrane; active under low-iron conditions; may transport other cations; protein abundance increases in response to DNA replication stress; MRS4 has a paralog, MRS3, that arose from the whole genome duplication","termid":"PBO:0084307"}


id: GO:0005795
data:
  {"annotated_genes":["SJAG_03278","SJAG_01025","SJAG_00330","SJAG_03555","SJAG_02902","SJAG_04112","SJAG_00567","SJAG_03634","SJAG_02666","SJAG_00816","SJAG_01633","SJAG_03347","SJAG_04548","SJAG_04770","SJAG_01276","SJAG_04095","SJAG_01516","SJAG_04739"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58078,62676,69856,71922,72184],"is_not":false,"summary":null,"term":"GO:0005795"},{"annotations":[77481,97914],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000137"},{"annotations":[79361],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031985"},{"annotations":[99965,73145,78315,80441],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005797"},{"annotations":[101386,73144,80440,97915,78314],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000138"},{"annotations":[71792],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[89305,71483,59912,120048],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00330":null,"SJAG_00567":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01516":null,"SJAG_01633":null,"SJAG_02666":null,"SJAG_02902":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04548":null,"SJAG_04739":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"Golgi stack","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0016940"],"synonyms":[{"name":"Golgi cisternae","type":"exact"},{"name":"dictyosome","type":"narrow"}],"termid":"GO:0005795","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005795":null,"GO:0005797":null,"GO:0031985":null,"GO:0140497":null}}


id: PR:O14100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zds1 gene.","definition_xrefs":["UniProtKB:O14100","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein zds1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31F12.01","synonyms":[{"name":"Spom972h-zds1","type":"exact"},{"name":"meiotically up-regulated gene 88 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14100"}


id: PATO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000202 long term memory (obsolete PATO:0000202)","termid":"PATO:0000202"}


id: PBO:0001807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease, unknown 3 (predicted)","termid":"PBO:0001807"}


id: MONDO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete exposure-related interstitial lung disease (obsolete MONDO:0017040)","secondary_identifiers":["Orphanet:264984"],"termid":"MONDO:0017040","xrefs":{"Monarch":{"xref_id":"0017040"}}}


id: MONDO:0020979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hamartoma characterized by localized pilosebaceous apparatus malformation.","definition_xrefs":["NCIT:C5565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma of skin appendage","termid":"MONDO:0021539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pilosebaceous hamartoma","secondary_identifiers":["UMLS:C1335410","icd11.foundation:59912591","MEDGEN:277515"],"synonyms":[{"name":"pilosebaceous hamartoma","type":"exact"}],"termid":"MONDO:0020979","xrefs":{"Monarch":{"xref_id":"0020979"}}}


id: PBO:0091724
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by D. melanogaster CDC2","termid":"PBO:0091724"}


id: PBO:0057846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3158-2","termid":"PBO:0057846"}


id: GO:0004895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding by a cell-adhesion protein on the cell surface to an extracellular matrix component, to mediate adhesion of the cell to the external substrate or to another cell and to initiate intracellular signaling. Cell adhesion receptors include integrins and cadherins.","definition_xrefs":["GOC:BHF-UCL","Wikipedia:Cell_adhesion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"},{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0098631","GO:0005515","GO:0005488","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"cell adhesion receptor activity","termid":"GO:0004895"}


id: SO:0001543
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that affects the post transcriptional processing of a transcript with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_function_variant","termid":"SO:0001538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_processing_variant","synonyms":[{"name":"transcript processing variant","type":"exact"}],"termid":"SO:0001543"}


id: PBO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteome hyperlink","termid":"PBO:0001051"}


id: PBO:0087954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination factor eRF3; has a role in mRNA deadenylation and decay; altered protein conformation creates the [PSI(+)] prion that modifies cellular fitness, alters translational fidelity by affecting reading frame selection, and results in a nonsense suppressor phenotype; many stress-response genes are repressed in the presence of [PSI(+)]","termid":"PBO:0087954"}


id: MONDO:0975847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disease with susceptibility to mycobacterium tuberculosis","secondary_identifiers":["OMIM:621004"],"termid":"MONDO:0975847","xrefs":{"Monarch":{"xref_id":"0975847"}}}


id: FYPO:0008176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere inner repeat region are present at greater levels than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased centromeric inner repeat transcript level","termid":"FYPO:0008176"}


id: PBO:0038879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 6","termid":"PBO:0038879"}


id: PBO:0002566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein","termid":"PBO:0002566"}


id: GO:0071933
data:
  {"annotated_genes":["SJAG_02228","SJAG_04001","SJAG_03455","SJAG_01732"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64349,76268,77021,105161],"is_not":false,"summary":null,"term":"GO:0071933"}]},"cv_name":"molecular_function","definition":"Binding to an Arp2/3 complex, a protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_02228":null,"SJAG_03455":null,"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Arp2/3 complex binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0071933","terms_by_termid":{"GO:0071933":null}}


id: PBO:0047937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(13)(q13.2)","termid":"PBO:0047937"}


id: PBO:0086799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR220C is not an essential gene","termid":"PBO:0086799"}


id: GO:1902463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cell leading edge.","definition_xrefs":["GOC:lb","PMID:21543326","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell leading edge","synonyms":[{"name":"protein localisation in cell leading edge","type":"exact"},{"name":"protein localisation to cell leading edge","type":"exact"},{"name":"protein localization in cell leading edge","type":"exact"}],"termid":"GO:1902463"}


id: GO:0030237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of female sex of an individual organism.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female sex determination","termid":"GO:0030237"}


id: PBO:0088768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh2","termid":"PBO:0088768"}


id: GO:0003009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control.","definition_xrefs":["GOC:mtg_muscle","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"musculoskeletal movement","termid":"GO:0050881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle contraction","termid":"GO:0003009"}


id: PBO:0067911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 213","termid":"PBO:0067911"}


id: GO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of megakaryocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"regulation of megakaryocyte differentiation","termid":"GO:0045652"},{"relation_name":"positively_regulates","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of megakaryocyte differentiation","synonyms":[{"name":"activation of megakaryocyte differentiation","type":"narrow"},{"name":"stimulation of megakaryocyte differentiation","type":"narrow"},{"name":"up regulation of megakaryocyte differentiation","type":"exact"},{"name":"up-regulation of megakaryocyte differentiation","type":"exact"},{"name":"upregulation of megakaryocyte differentiation","type":"exact"}],"termid":"GO:0045654"}


id: PBO:0004561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf29","termid":"PBO:0004561"}


id: RO:0002505
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has intermediate c if and only if p has parts p1, p2 and p1 has output c, and p2 has input c","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intermediate","termid":"RO:0002505"}


id: PATO:0000322
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with high wavelength of the long-wave end of the visible spectrum, evoked in the human observer by radiant energy with wavelengths of approximately 630 to 750 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"red","termid":"PATO:0000322"}


id: PBO:0062273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 4 pseudogene","termid":"PBO:0062273"}


id: PBO:0087953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination and ribosome biogenesis factor; ATP binding cassette protein that cosediments with polysomes and is required for biogenesis of the small ribosomal subunit; Asn/Gln-rich rich region supports [NU+] prion formation and susceptibility to [PSI+] prion induction","termid":"PBO:0087953"}


id: PBO:0029100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sulfate_import","termid":"PBO:0029100"}


id: PBO:0040171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNS pseudogene 2","termid":"PBO:0040171"}


id: GO:0021557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the oculomotor nerve over time, from its formation to the mature structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GO_REF:0000021","GOC:dgh","ISBN:0838580343","GOC:cls","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve development","synonyms":[{"name":"CN III development","type":"related"},{"name":"cranial nerve 3 development","type":"exact"},{"name":"cranial nerve III development","type":"exact"}],"termid":"GO:0021557"}


id: MOD:01798
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal 3'-phosphohistidine residue to 3'-phosphohistidine immonium ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"3'-phospho-L-histidine","termid":"MOD:00045"},{"relation_name":"is_a","term_name":"phosphohistidine immonium ion","termid":"MOD:01791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphohistidine immonium ion","synonyms":[{"name":"2-(1-phosphono-1H-imidazol-5-yl)ethaniminium","type":"exact"},{"name":"Npi-phosphorylated L-histidine","type":"exact"}],"termid":"MOD:01798"}


id: MONDO:0010103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teeth, fused","secondary_identifiers":["UMLS:C0016873","OMIM:273000","MESH:D005671","MEDGEN:4808","SCTID:1744008"],"synonyms":[{"name":"teeth, fused","type":"exact"}],"termid":"MONDO:0010103","xrefs":{"Monarch":{"xref_id":"0010103"}}}


id: MONDO:0012641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"restless legs syndrome, susceptibility to","termid":"MONDO:0100170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome, susceptibility to, 5","secondary_identifiers":["MEDGEN:370807","UMLS:C1970010","OMIM:611242"],"synonyms":[{"name":"RLS 5","type":"related"},{"name":"RLS5","type":"exact"},{"name":"restless legs syndrome 5","type":"exact"},{"name":"restless legs syndrome, susceptibility to, 5","type":"exact"}],"termid":"MONDO:0012641","xrefs":{"Monarch":{"xref_id":"0012641"}}}


id: PBO:0057091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 187","termid":"PBO:0057091"}


id: GO:1903904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of T cell polarity.","definition_xrefs":["PMID:23575248","GO_REF:0000058","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"is_a","term_name":"regulation of establishment of T cell polarity","termid":"GO:1903903"},{"relation_name":"negatively_regulates","term_name":"establishment of T cell polarity","termid":"GO:0001768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007163"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007155","GO:0007163"],"is_obsolete":false,"name":"negative regulation of establishment of T cell polarity","synonyms":[{"name":"down regulation of T cell polarization","type":"exact"},{"name":"down regulation of T lymphocyte polarization","type":"exact"},{"name":"down regulation of T-cell polarization","type":"exact"},{"name":"down regulation of establishment of T cell polarity","type":"exact"},{"name":"down regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"down regulation of establishment of T-cell polarity","type":"exact"},{"name":"down regulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"down-regulation of T cell polarization","type":"exact"},{"name":"down-regulation of T lymphocyte polarization","type":"exact"},{"name":"down-regulation of T-cell polarization","type":"exact"},{"name":"down-regulation of establishment of T cell polarity","type":"exact"},{"name":"down-regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"down-regulation of establishment of T-cell polarity","type":"exact"},{"name":"down-regulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"downregulation of T cell polarization","type":"exact"},{"name":"downregulation of T lymphocyte polarization","type":"exact"},{"name":"downregulation of T-cell polarization","type":"exact"},{"name":"downregulation of establishment of T cell polarity","type":"exact"},{"name":"downregulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"downregulation of establishment of T-cell polarity","type":"exact"},{"name":"downregulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"inhibition of T cell polarization","type":"narrow"},{"name":"inhibition of T lymphocyte polarization","type":"narrow"},{"name":"inhibition of T-cell polarization","type":"narrow"},{"name":"inhibition of establishment of T cell polarity","type":"narrow"},{"name":"inhibition of establishment of T lymphocyte polarity","type":"narrow"},{"name":"inhibition of establishment of T-cell polarity","type":"narrow"},{"name":"inhibition of establishment of T-lymphocyte polarity","type":"narrow"},{"name":"negative regulation of T cell polarization","type":"exact"},{"name":"negative regulation of T lymphocyte polarization","type":"exact"},{"name":"negative regulation of T-cell polarization","type":"exact"},{"name":"negative regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"negative regulation of establishment of T-cell polarity","type":"exact"},{"name":"negative regulation of establishment of T-lymphocyte polarity","type":"exact"}],"termid":"GO:1903904"}


id: PBO:0048463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucokinase","termid":"PBO:0048463"}


id: PBO:0005643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MVB sorting pathway protein (predicted)","termid":"PBO:0005643"}


id: GO:0098872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled neurotransmitter receptor activity occurring in the postsynaptic membrane, that is involved in regulating the cytosolic concentration of calcium ions in the postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","termid":"GO:0099583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0098872"}


id: PBO:0041327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 80","termid":"PBO:0041327"}


id: PBO:0081073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 5","termid":"PBO:0081073"}


id: GO:1904132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in neural plate elongation.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:24892953","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in neural plate elongation","termid":"GO:1904130"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in neural plate elongation","termid":"GO:0022007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in neural plate elongation","synonyms":[{"name":"activation of convergent extension involved in neural plate elongation","type":"narrow"},{"name":"up regulation of convergent extension involved in neural plate elongation","type":"exact"},{"name":"up-regulation of convergent extension involved in neural plate elongation","type":"exact"},{"name":"upregulation of convergent extension involved in neural plate elongation","type":"exact"}],"termid":"GO:1904132"}


id: MONDO:1010572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in long-tailed chinchilla.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, long-tailed chinchilla","secondary_identifiers":["OMIA:000279-34839"],"termid":"MONDO:1010572","xrefs":{"Monarch":{"xref_id":"1010572"}}}


id: GO:0018773
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74375],"is_not":false,"summary":null,"term":"GO:0018773"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetylpyruvate + H2O = acetate + H+ + pyruvate.","definition_xrefs":["RHEA:16097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"acetylpyruvate hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.7.1.6","MetaCyc:ACETYLPYRUVATE-HYDROLASE-RXN","KEGG_REACTION:R00324","UM-BBD_reactionID:r0095"],"synonyms":[{"name":"2,4-dioxopentanoate acetylhydrolase activity","type":"related"}],"termid":"GO:0018773","terms_by_termid":{"GO:0018773":null}}


id: MONDO:0004621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the upper lip.","direct_ancestors":[{"relation_name":"is_a","term_name":"lip cancer","termid":"MONDO:0006834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"upper lip cancer","secondary_identifiers":["ICD9:140.3","DOID:8630","ICD9:140.0"],"synonyms":[{"name":"cancer of upper lip","type":"exact"},{"name":"malignant neoplasm of upper lip","type":"exact"},{"name":"malignant upper lip neoplasm","type":"exact"},{"name":"upper lip cancer","type":"exact"}],"termid":"MONDO:0004621","xrefs":{"Monarch":{"xref_id":"0004621"}}}


id: PBO:0026796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proteasome_localization_to_nuclear_periphery","termid":"PBO:0026796"}


id: PBO:0087912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in iron utilization and homeostasis; binds consensus site PyPuCACCCPu and activates transcription in response to changes in iron availability; in iron-replete conditions localization is regulated by Grx3p, Grx4p, and Fra2p, and promoter binding is negatively regulated via Grx3p-Grx4p binding; AFT1 has a paralog, AFT2, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087912"}


id: MONDO:0100429
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"}]},"cv_name":"mondo","definition":"A cholestatic disorder characterized by (i) pruritus with onset in the second or third trimester of pregnancy, (ii) elevated serum aminotransferases and bile acid levels, and (iii) spontaneous relief of signs and symptoms within two to three weeks after delivery.","definition_xrefs":["Orphanet:69665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrahepatic cholestasis","termid":"MONDO:0019072"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"intrahepatic cholestasis of pregnancy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1576251337","MEDGEN:82788","DOID:0070227","UMLS:C0268318","MESH:C535932","GARD:9804"],"synonyms":[{"name":"ICP","type":"exact"},{"name":"RICP","type":"related"},{"name":"cholestasis, intrahepatic of pregnancy","type":"related"},{"name":"familial intrahepatic cholestasis of pregnancy","type":"related"},{"name":"familial recurrent intrahepatic cholestasis of pregnancy","type":"related"},{"name":"gravidic intrahepatic cholestasis","type":"exact"},{"name":"intrahepatic cholestasis of pregnancy","type":"exact"},{"name":"pregnancy related cholestasis","type":"exact"},{"name":"pregnancy-related cholestasis","type":"exact"},{"name":"recurrent intrahepatic cholestasis of pregnancy","type":"exact"}],"termid":"MONDO:0100429","terms_by_termid":{"MONDO:0013995":null},"xrefs":{"Monarch":{"xref_id":"0100429"}}}


id: MONDO:0005309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the spine in which the continuity of a vertebral bone is broken. Symptoms include back pain and difficulty bending and twisting.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"},{"relation_name":"is_a","term_name":"spinal injury","termid":"MONDO:0037747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal fracture","secondary_identifiers":["SCTID:50448004","EFO:0003902","MESH:D016103"],"synonyms":[{"name":"bone fracture of vertebral column","type":"exact"},{"name":"vertebral column bone fracture","type":"exact"}],"termid":"MONDO:0005309","xrefs":{"Monarch":{"xref_id":"0005309"}}}


id: MONDO:0015909
data:
  {"annotated_genes":["SJAG_05180","SJAG_00611","SJAG_02585","SJAG_03254","SJAG_01296","SJAG_05979","SJAG_04491","SJAG_02597","SJAG_00921","SJAG_04066","SJAG_00465","SJAG_00487","SJAG_00166","SJAG_02904","SJAG_01840","SJAG_02340","SJAG_02749","SJAG_00749","SJAG_04478","SJAG_00468","SJAG_04695","SJAG_02335","SJAG_02358","SJAG_01621","SJAG_02046","SJAG_02339","SJAG_04881","SJAG_03919","SJAG_01366","SJAG_01410","SJAG_04204","SJAG_04746","SJAG_01588","SJAG_03335","SJAG_04168","SJAG_04414","SJAG_00846","SJAG_02802","SJAG_02556","SJAG_02894","SJAG_02280","SJAG_01568","SJAG_00640","SJAG_01512","SJAG_02708","SJAG_03762"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013851"},{"annotations":[87335,87336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007110"},{"annotations":[88107,88106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013217"},{"annotations":[88996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013964"},{"annotations":[87630,87631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014245"},{"annotations":[88206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014394"},{"annotations":[87144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010493"},{"annotations":[88236,88235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011639"},{"annotations":[88630,88631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044309"},{"annotations":[88634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044310"},{"annotations":[87865,87864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032668"},{"annotations":[87866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032669"},{"annotations":[87868,87869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032670"},{"annotations":[87586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031071"},{"annotations":[87664,87665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012529"},{"annotations":[88568,88569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012924"},{"annotations":[88567,88566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012925"},{"annotations":[88585,88584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012937"},{"annotations":[88582,88583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012938"},{"annotations":[88586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012939"},{"annotations":[88108,88109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013216"},{"annotations":[88132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013248"},{"annotations":[88556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013499"},{"annotations":[86840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014108"},{"annotations":[88811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014986"},{"annotations":[88815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014987"},{"annotations":[88812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014985"},{"annotations":[87135,89096,87136,89095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012197"},{"annotations":[88722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[87776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"}]},"cv_name":"mondo","definition":"Anemia resulting from bone marrow failure (aplastic or hypoplastic bone marrow). The production of erythroblasts and red cells is markedly decreased, and it may be associated with decreased production of granulocytes (granulocytopenia) and platelets (thrombocytopenia) as well. Aplastic anemia may be idiopathic or secondary due to bone marrow damage by toxins, radiation, or immunologic factors.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"telomere syndrome","termid":"MONDO:0100137"},{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00487":null,"SJAG_00611":null,"SJAG_00640":null,"SJAG_00749":null,"SJAG_00846":null,"SJAG_00921":null,"SJAG_01296":null,"SJAG_01366":null,"SJAG_01410":null,"SJAG_01512":null,"SJAG_01568":null,"SJAG_01588":null,"SJAG_01621":null,"SJAG_01840":null,"SJAG_02046":null,"SJAG_02280":null,"SJAG_02335":null,"SJAG_02339":null,"SJAG_02340":null,"SJAG_02358":null,"SJAG_02556":null,"SJAG_02585":null,"SJAG_02597":null,"SJAG_02708":null,"SJAG_02749":null,"SJAG_02802":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03254":null,"SJAG_03335":null,"SJAG_03762":null,"SJAG_03919":null,"SJAG_04066":null,"SJAG_04168":null,"SJAG_04204":null,"SJAG_04414":null,"SJAG_04478":null,"SJAG_04491":null,"SJAG_04695":null,"SJAG_04746":null,"SJAG_04881":null,"SJAG_05180":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"aplastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:284.9","UMLS:C0002874","NANDO:1200295","GARD:20234","NANDO:1200301","DOID:12449","MEDGEN:8063","NANDO:2100201","NANDO:2200693","SCTID:306058006","Orphanet:182040","NCIT:C2870","ICD9:284.8","MESH:D000741"],"termid":"MONDO:0015909","terms_by_termid":{"MONDO:0007110":null,"MONDO:0010438":null,"MONDO:0010493":null,"MONDO:0011639":null,"MONDO:0012197":null,"MONDO:0012529":null,"MONDO:0012924":null,"MONDO:0012925":null,"MONDO:0012937":null,"MONDO:0012938":null,"MONDO:0012939":null,"MONDO:0013216":null,"MONDO:0013217":null,"MONDO:0013248":null,"MONDO:0013499":null,"MONDO:0013851":null,"MONDO:0013964":null,"MONDO:0014108":null,"MONDO:0014166":null,"MONDO:0014245":null,"MONDO:0014394":null,"MONDO:0014985":null,"MONDO:0014986":null,"MONDO:0014987":null,"MONDO:0031071":null,"MONDO:0032668":null,"MONDO:0032669":null,"MONDO:0032670":null,"MONDO:0044309":null,"MONDO:0044310":null},"xrefs":{"Monarch":{"xref_id":"0015909"}}}


id: GO:0110092
data:
  {"annotated_genes":["SJAG_03287","SJAG_01777","SJAG_00140","SJAG_03092","SJAG_01370","SJAG_02246","SJAG_00113","SJAG_05260"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89203,91585,92820,97069,99451,101737,101806,107022],"is_not":false,"summary":null,"term":"GO:0110092"}]},"cv_name":"cellular_component","definition":"The area of a motile nucleus closest to the direction of movement.","definition_xrefs":["GOC:al","PMID:24335254","PMID:15030757","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_01370":null,"SJAG_01777":null,"SJAG_02246":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleus leading edge","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"horsetail nucleus leading edge","type":"narrow"}],"termid":"GO:0110092","terms_by_termid":{"GO:0110092":null}}


