# terms

id: MONDO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myocarditis that is caused by an infection with a bacterial agent.","definition_xrefs":["NCIT:C128380"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute myocarditis","termid":"MONDO:0002815"},{"relation_name":"is_a","term_name":"myocarditis","termid":"MONDO:0004496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"bacterial myocarditis","secondary_identifiers":["SCTID:64043005","ICD9:422.92","DOID:10779","MEDGEN:730492","UMLS:C1384588","ICD10CM:I40.0","icd11.foundation:900037931"],"synonyms":[{"name":"septic myocarditis","type":"exact"}],"termid":"MONDO:0001114","xrefs":{"Monarch":{"xref_id":"0001114"}}}


id: PBO:0076794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane epididymal protein 1","termid":"PBO:0076794"}


id: PBO:0079496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 17","termid":"PBO:0079496"}


id: PR:O42909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized zinc-type alcohol dehydrogenase-like protein YdjL that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C16A3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.02c","secondary_identifiers":["UniProtKB:O42909"],"synonyms":[{"name":"Spom972h-ydjL","type":"exact"}],"termid":"PR:O42909"}


id: GO:0021599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the abducens nerve. This process pertains to the initial formation of a structure from unspecified parts. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GO_REF:0000021","ISBN:0838580343","GOC:cls","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"abducens nerve morphogenesis","termid":"GO:0021598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve formation","synonyms":[{"name":"CN VI biosynthesis","type":"related"},{"name":"CN VI formation","type":"related"}],"termid":"GO:0021599"}


id: PBO:0067751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 50","termid":"PBO:0067751"}


id: PBO:0005399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent FMN reductase (predicted)","termid":"PBO:0005399"}


id: MONDO:0024284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A demodicidosis that involves the sebaceous gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"},{"relation_name":"is_a","term_name":"demodicidosis","termid":"MONDO:0017280"},{"relation_name":"is_a","term_name":"parasitic skin disorder","termid":"MONDO:0024610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"demodicidosis of sebaceous gland","synonyms":[{"name":"sebaceous gland demodicidosis","type":"exact"}],"termid":"MONDO:0024284","xrefs":{"Monarch":{"xref_id":"0024284"}}}


id: MONDO:0020588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung tumor that arises from perivascular epithelioid cells (PECs).","definition_xrefs":["NCIT:C142783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"},{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung PEComa","secondary_identifiers":["UMLS:C4684821","MEDGEN:1639012"],"synonyms":[{"name":"lung PEComa","type":"exact"},{"name":"lung pecomatous tumor","type":"exact"},{"name":"lung pecomatous tumour","type":"exact"}],"termid":"MONDO:0020588","xrefs":{"Monarch":{"xref_id":"0020588"}}}


id: MONDO:0003237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually polypoid, benign neoplasm that arises from the uterine corpus. It is characterized by the presence of benign epithelial glands embedded in benign fibromyomatous tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"adenomyoma","termid":"MONDO:0005635"},{"relation_name":"is_a","term_name":"benign neoplasm of corpus uteri","termid":"MONDO:0021525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenomyoma of uterine corpus","secondary_identifiers":["MEDGEN:234465","NCIT:C6338","UMLS:C1336903","DOID:4994"],"synonyms":[{"name":"adenomyoma of body of uterus","type":"exact"},{"name":"adenomyoma of corpus uteri","type":"exact"},{"name":"adenomyoma of the body of uterus","type":"exact"},{"name":"adenomyoma of the corpus uteri","type":"exact"},{"name":"adenomyoma of the uterine body","type":"exact"},{"name":"adenomyoma of the uterine corpus","type":"exact"},{"name":"adenomyoma of uterine body","type":"exact"},{"name":"adenomyoma of uterine corpus","type":"exact"},{"name":"body of uterus adenomyoma","type":"exact"},{"name":"corpus uteri adenomyoma","type":"exact"},{"name":"uterine body adenomyoma","type":"exact"},{"name":"uterine corpus adenomyoma","type":"exact"}],"termid":"MONDO:0003237","xrefs":{"Monarch":{"xref_id":"0003237"}}}


id: GO:0009033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADH + H+ + trimethylamine-N-oxide = NAD+ + trimethylamine + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trimethylamine-N-oxide reductase activity (obsolete GO:0009033)","synonyms":[{"name":"NADH:trimethylamine-N-oxide oxidoreductase","type":"exact"},{"name":"trimethylamine N-oxide reductase","type":"exact"},{"name":"trimethylamine oxidase activity","type":"exact"},{"name":"trimethylamine oxide reductase","type":"exact"}],"termid":"GO:0009033"}


id: MONDO:0012603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dystonia characterized by autosomal dominant inheritance of recurrent brief involuntary hyperkinesias triggered by sudden movements that has material basis in variation in the chromosome region 16q13-q22.1.","definition_xrefs":["DOID:0090054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"episodic kinesigenic dyskinesia","termid":"MONDO:0044202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"episodic kinesigenic dyskinesia 2","secondary_identifiers":["MEDGEN:410022","UMLS:C1970238","GARD:15506","MESH:C567026","NANDO:1200532","OMIM:611031"],"synonyms":[{"name":"EKD2","type":"related"},{"name":"dystonia 19","type":"related"},{"name":"episodic kinesigenic dyskinesia 2","type":"exact"},{"name":"episodic kinesigenic dyskinesia type 2","type":"exact"}],"termid":"MONDO:0012603","xrefs":{"Monarch":{"xref_id":"0012603"}}}


id: PATO:0001140
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001140 immunoglobulin concentration value (obsolete PATO:0001140)","termid":"PATO:0001140"}


id: GO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral response seeking to protect an organism from an perceived external threat to that organism.","definition_xrefs":["GOC:add","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral defense response","synonyms":[{"name":"behavioural defense response","type":"exact"}],"termid":"GO:0002209"}


id: MONDO:0003593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant adipose tissue neoplasm of the breast.","definition_xrefs":["NCIT:C5187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast liposarcoma","secondary_identifiers":["DOID:5701","UMLS:C1332632","MEDGEN:231968"],"synonyms":[{"name":"breast liposarcoma","type":"exact"},{"name":"liposarcoma of breast","type":"exact"},{"name":"liposarcoma of the breast","type":"exact"}],"termid":"MONDO:0003593","xrefs":{"Monarch":{"xref_id":"0003593"}}}


id: GO:0034866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpentanoyl-CoA = 2,4,4-trimethylpent-2-enoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpentanoyl-CoA dehydrogenase activity (obsolete GO:0034866)","termid":"GO:0034866"}


id: PBO:0113390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; located in the upstream region of PMA1; conserved among S. cerevisiae strains; mediates the cycloheximide-induced degradation of ubiquitinated Agp2p, a regulator of high affinity polyamine and carnitine transport; null mutant is polyamine resistant due to downregulation of PMA1","termid":"PBO:0113390"}


id: PBO:0080986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 2","termid":"PBO:0080986"}


id: PBO:0077836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophoblast glycoprotein","termid":"PBO:0077836"}


id: GO:1990579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of a peptidyl-serine to form peptidyl-O-phospho-L-serine on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["GOC:bf","PMID:21317875","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine autophosphorylation","termid":"GO:0036289"},{"relation_name":"is_a","term_name":"protein trans-autophosphorylation","termid":"GO:0036290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine trans-autophosphorylation","synonyms":[{"name":"serine autophosphorylation in trans","type":"exact"},{"name":"serine transautophosphorylation","type":"exact"}],"termid":"GO:1990579"}


id: PBO:0057477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 596","termid":"PBO:0057477"}


id: MONDO:0019304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare photodermatosis (obsolete MONDO:0019304)","secondary_identifiers":["Orphanet:79390"],"synonyms":[{"name":"rare skin photosensitivity","type":"exact"}],"termid":"MONDO:0019304","xrefs":{"Monarch":{"xref_id":"0019304"}}}


id: PBO:0052716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 8","termid":"PBO:0052716"}


id: MONDO:0016200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase (obsolete MONDO:0016200)","secondary_identifiers":["Orphanet:209203"],"synonyms":[{"name":"qualitative or quantitative defects of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase type -","type":"exact"}],"termid":"MONDO:0016200","xrefs":{"Monarch":{"xref_id":"0016200"}}}


id: GO:0010321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vegetative phase change. Vegetative phase change is the set of post-embryonic processes involved in the transition of a plant from a juvenile phase of vegetative development to an adult phase of vegetative development.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"vegetative phase change","termid":"GO:0010050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vegetative phase change","termid":"GO:0010321"}


id: PBO:0056848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mahogunin ring finger 1","termid":"PBO:0056848"}


id: PBO:0086907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative vacuolar membrane transporter for cationic amino acids; involved in vacuolar export of arginine under nitrogen starvation conditions; appears to be inactive under nitrogen replete conditions; may contribute to amino acid homeostasis; vacuolar membrane protein; member of the PQ-loop family, containing seven transmembrane domains; homologous to the human lysosomal cationic amino acid exporter PQLC2; null mutant is functionally complemented by the rat PQLC2 vacuolar transporter","termid":"PBO:0086907"}


id: MONDO:0003437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small cell lung carcinoma detectable by sputum cytology only. The primary tumor is undetectable radiographically or during bronchoscopy; therefore, it can not be assessed.","definition_xrefs":["NCIT:C6683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell lung carcinoma","termid":"MONDO:0008433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"occult small cell lung carcinoma","secondary_identifiers":["DOID:5414","MEDGEN:233791","UMLS:C1335099"],"synonyms":[{"name":"lung occult small cell carcinoma","type":"related"},{"name":"occult small cell carcinoma of lung","type":"exact"},{"name":"occult small cell carcinoma of the lung","type":"exact"},{"name":"occult small cell lung carcinoma","type":"exact"}],"termid":"MONDO:0003437","xrefs":{"Monarch":{"xref_id":"0003437"}}}


id: GO:1905020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of methionine-tRNA ligase activity.","definition_xrefs":["PMID:1665486","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of methionine-tRNA ligase activity (obsolete GO:1905020)","synonyms":[{"name":"activation of L-methionine:tRNAMet ligase (AMP-forming)","type":"narrow"},{"name":"activation of MetRS activity","type":"narrow"},{"name":"activation of methionine translase activity","type":"narrow"},{"name":"activation of methionine-tRNA ligase activity","type":"narrow"},{"name":"activation of methionyl-tRNA synthetase activity","type":"narrow"},{"name":"activation of methionyl-transfer RNA synthetase activity","type":"narrow"},{"name":"activation of methionyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of methionyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"positive regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of MetRS activity","type":"exact"},{"name":"positive regulation of methionine translase activity","type":"exact"},{"name":"positive regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"positive regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"up regulation of MetRS activity","type":"exact"},{"name":"up regulation of methionine translase activity","type":"exact"},{"name":"up regulation of methionine-tRNA ligase activity","type":"exact"},{"name":"up regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"up regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"up regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up-regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of MetRS activity","type":"exact"},{"name":"up-regulation of methionine translase activity","type":"exact"},{"name":"up-regulation of methionine-tRNA ligase activity","type":"exact"},{"name":"up-regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"up-regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"upregulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"upregulation of MetRS activity","type":"exact"},{"name":"upregulation of methionine translase activity","type":"exact"},{"name":"upregulation of methionine-tRNA ligase activity","type":"exact"},{"name":"upregulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"upregulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"upregulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905020"}


id: SO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_part","synonyms":[{"name":"chromosomal region","type":"exact"},{"name":"chromosomal_region","type":"exact"},{"name":"chromosome part","type":"exact"}],"termid":"SO:0000830"}


id: PBO:0070046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 3, pseudogene","termid":"PBO:0070046"}


id: PBO:0079715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 2","termid":"PBO:0079715"}


id: FYPO:0006208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell differs from normal during a cellular response to copper ion starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level","termid":"FYPO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"altered RNA level during cellular response to copper ion starvation","synonyms":[{"name":"abnormal RNA level during cellular response to copper ion starvation","type":"exact"},{"name":"altered RNA level during cellular response to copper starvation","type":"exact"},{"name":"altered RNA level during copper starvation","type":"exact"},{"name":"altered cellular RNA level during cellular response to copper ion starvation","type":"exact"},{"name":"altered transcript level during cellular response to copper ion starvation","type":"exact"}],"termid":"FYPO:0006208"}


id: MONDO:0958226
data:
  {"annotated_genes":["SJAG_02896"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88915],"is_not":false,"summary":null,"term":"MONDO:0958226"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy, porphyria-related","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5935575","OMIM:620711","MEDGEN:1862491"],"termid":"MONDO:0958226","terms_by_termid":{"MONDO:0958226":null},"xrefs":{"Monarch":{"xref_id":"0958226"}}}


id: PBO:0086604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression regulated by copper levels","termid":"PBO:0086604"}


id: MONDO:0014964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum (obsolete MONDO:0014964)","termid":"MONDO:0014964","xrefs":{"Monarch":{"xref_id":"0014964"}}}


id: PBO:0071678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 10","termid":"PBO:0071678"}


id: GO:0010879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol into cells that is part of their accumulation and maintenance.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport involved in lipid storage","termid":"GO:0010877"},{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"},{"relation_name":"part_of","term_name":"cholesterol storage","termid":"GO:0010878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cholesterol transport involved in cholesterol storage","termid":"GO:0010879"}


id: PBO:0090131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c' (proteolipid subunit)","termid":"PBO:0090131"}


id: MONDO:0009766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocerebral hypopigmentation syndrome of Preus","secondary_identifiers":["UMLS:C2931646","MEDGEN:419131","MESH:C537866","Orphanet:2720","OMIM:257790","GARD:4034","SCTID:716174001"],"synonyms":[{"name":"oculocerebral hypopigmentation syndrome of Preus","type":"exact"},{"name":"oculocerebral hypopigmentation syndrome type Preus","type":"related"}],"termid":"MONDO:0009766","xrefs":{"Monarch":{"xref_id":"0009766"}}}


id: GO:1901520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aspyridone B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"},{"relation_name":"is_a","term_name":"aspyridone B metabolic process","termid":"GO:1901519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"aspyridone B catabolic process","synonyms":[{"name":"aspyridone B breakdown","type":"exact"},{"name":"aspyridone B catabolism","type":"exact"},{"name":"aspyridone B degradation","type":"exact"}],"termid":"GO:1901520"}


id: GO:0085044
data:
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id: PR:Q9USJ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.06c gene.","definition_xrefs":["UniProtKB:Q9USJ6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H-dependent FMN reductase C4B3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.06c","synonyms":[{"name":"FMN reductase C4B3.06c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FMN reductase [NAD(P)H] (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC4B3.06c","type":"exact"},{"name":"azoreductase C4B3.06c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USJ6"}


id: PBO:0074427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 27","termid":"PBO:0074427"}


id: PBO:0028979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_methionine_sulfur_source","termid":"PBO:0028979"}


id: GO:1904490
data:
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id: GO:1905190
data:
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id: GO:0048291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to biosynthesis of an IgG isotype, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and one of the IgG constant region gene segments in the immunoglobulin heavy chain locus.","definition_xrefs":["PMID:12370374","PMID:2113175","PMID:9186655","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006310","GO:0010467","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"isotype switching to IgG isotypes","synonyms":[{"name":"class switching to IgG isotypes","type":"exact"},{"name":"isotype switch recombination to IgG isotypes","type":"exact"}],"termid":"GO:0048291"}


id: PBO:0087259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase involved in activation of meiosis; associates with Ime1p and mediates its stability, activates Ndt80p; IME2 expression is positively regulated by Ime1p; human CDK2 can complement ime2 null mutant","termid":"PBO:0087259"}


id: GO:0015291
data:
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id: GO:0033043
data:
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id: GO:0046806
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins that form a scaffold around which the viral capsid is constructed.","definition_xrefs":["ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"viral scaffold","termid":"GO:0046806"}


id: MONDO:0005031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poorly circumscribed neoplasm arising from the soft tissues. It is characterized by the presence of spindle-shaped fibroblasts and an infiltrative growth pattern.","definition_xrefs":["NCIT:C3042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis","secondary_identifiers":["EFO:0000497","UMLS:C0016048","MEDGEN:8836","SCTID:723976005"],"synonyms":[{"name":"fibromatosis","type":"exact"}],"termid":"MONDO:0005031","xrefs":{"Monarch":{"xref_id":"0005031"}}}


id: GO:0046722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of lactic acid, 2-hydroxypropanoic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane lactate transport","termid":"GO:0035879"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"lactic acid secretion","synonyms":[{"name":"lactate secretion","type":"exact"}],"termid":"GO:0046722"}


id: MONDO:0007432
data:
  {"annotated_genes":["SJAG_03258","SJAG_00737"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87878,87877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010829"},{"annotations":[87744,87745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014768"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"excluded_subClassOf","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"is_obsolete":false,"name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0751587","DOID:13945","NANDO:1200545","OMIMPS:125310","ICD9:447.8","MEDGEN:199687","ICD9:323.9"],"synonyms":[{"name":"CADASIL","type":"exact"},{"name":"Casil","type":"related"},{"name":"cerebral arteriopathy with subcortical infaracts and leukoencephalopathy","type":"exact"},{"name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy","type":"exact"},{"name":"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy","type":"related"},{"name":"dementia, hereditary multi-infarct type","type":"related"}],"termid":"MONDO:0007432","terms_by_termid":{"MONDO:0010829":null,"MONDO:0014768":null},"xrefs":{"Monarch":{"xref_id":"0007432"}}}


id: MONDO:0007510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clouston syndrome (or hidrotic ectodermal dysplasia) is characterized by the clinical triad of nail dystrophy, alopecia, and palmoplantar hyperkeratosis.","definition_xrefs":["Orphanet:189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Clouston syndrome","secondary_identifiers":["SCTID:54209007","OMIM:129500","GARD:2056","DOID:14693","MEDGEN:56416","UMLS:C0162361"],"synonyms":[{"name":"Clouston hidrotic ectodermal dysplasia","type":"related"},{"name":"Clouston syndrome","type":"exact"},{"name":"Clouston's hidrotic ectodermal dysplasia","type":"exact"},{"name":"Clouston's syndrome","type":"exact"},{"name":"ED2","type":"related"},{"name":"Patel Bixler syndrome","type":"related"},{"name":"alopecia, dysplastic nails, palmar and plantar hyperkeratosis","type":"related"},{"name":"autosomal dominant hidrotic ectodermal dysplasia","type":"related"},{"name":"ectodermal dysplasia 2, Clouston type","type":"related"},{"name":"ectodermal dysplasia, hidrotic","type":"related"},{"name":"ectodermal dysplasia, hidrotic, 2","type":"related"},{"name":"ectodermal dysplasia, hidrotic, 2, formerly","type":"related"},{"name":"ectodermal dysplasia, hidrotic, autosomal dominant","type":"related"},{"name":"hidrotic ectodermal dysplasia","type":"exact"},{"name":"hidrotic ectodermal dysplasia syndrome","type":"exact"},{"name":"hidrotic ectodermal dysplasia, autosomal dominant","type":"related"},{"name":"palmoplantar hyperkeratosis and alopecia","type":"related"}],"termid":"MONDO:0007510","xrefs":{"Monarch":{"xref_id":"0007510"}}}


id: GO:0048038
data:
  {"annotated_genes":["SJAG_03198","SJAG_04223","SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72542],"is_not":false,"summary":null,"term":"GO:0048038"},{"annotations":[117198,78584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048039"}]},"cv_name":"molecular_function","definition":"Binding to a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_03198":null,"SJAG_04223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"quinone binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048038","terms_by_termid":{"GO:0048038":null,"GO:0048039":null}}


id: PBO:0044820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109C","termid":"PBO:0044820"}


id: MONDO:0018451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. X-linked form of distal hereditary motor neuropathy.","definition_xrefs":["MONDO:patterns/x_linked"],"gene_count":0,"genotype_count":0,"name":"obsolete X-linked distal hereditary motor neuropathy (obsolete MONDO:0018451)","secondary_identifiers":["Orphanet:404538"],"synonyms":[{"name":"X-linked dHMN","type":"exact"},{"name":"X-linked distal spinal muscular atrophy","type":"exact"},{"name":"distal hereditary motor neuropathy, X-linked","type":"exact"}],"termid":"MONDO:0018451","xrefs":{"Monarch":{"xref_id":"0018451"}}}


id: GO:0015885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of 5-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate, into, out of, within, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"5-formyltetrahydrofolate transport","termid":"GO:0015885"}


id: GO:0019517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L- threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) to form the compound methylglyoxal, which is subsequently converted to D-lactate.","definition_xrefs":["MetaCyc:THRDLCTCAT-PWY","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"threonine catabolic process","termid":"GO:0006567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-threonine catabolic process to D-lactate","synonyms":[{"name":"L-threonine breakdown to D-lactate","type":"exact"},{"name":"L-threonine catabolic process to (R)-lactate","type":"broad"},{"name":"L-threonine catabolic process to methylglyoxal","type":"exact"},{"name":"L-threonine catabolic process to pyruvate","type":"related"},{"name":"L-threonine catabolism to D-lactate","type":"exact"},{"name":"L-threonine degradation to D-lactate","type":"exact"},{"name":"threonine catabolic process to D-lactate","type":"broad"}],"termid":"GO:0019517"}


id: PBO:0048278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT13 antisense RNA 1","termid":"PBO:0048278"}


id: PBO:0119667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 4","termid":"PBO:0119667"}


id: PBO:0017584
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RTS1","termid":"PBO:0017584"}


id: GO:0061924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of radial glial scaffolds. The scaffolds are used as a substrate for the radial migration of cells.","definition_xrefs":["PMID:22076441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"regulates","term_name":"formation of radial glial scaffolds","termid":"GO:0021943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation of radial glial scaffolds","synonyms":[{"name":"regulation of Bergmann fiber biosynthesis","type":"related"},{"name":"regulation of Bergmann fiber formation","type":"related"},{"name":"regulation of radial glial scaffold formation","type":"exact"}],"termid":"GO:0061924"}


id: PBO:0075188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G","termid":"PBO:0075188"}


id: GO:0009931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Calcium-dependent catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; and ATP + a protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0004672","GO:0003824","GO:0140096","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"calcium-dependent protein serine/threonine kinase activity","termid":"GO:0009931"}


id: GO:0039686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral DNA replication process where replication occurs in both directions from the starting point. This creates two replication forks, moving in opposite directions.","definition_xrefs":["VZ:1939","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"bidirectional double-stranded viral DNA replication","synonyms":[{"name":"viral bidirectional dsDNA replication","type":"exact"}],"termid":"GO:0039686"}


id: MONDO:0008615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tune deafness","secondary_identifiers":["UMLS:C1860646","ICD9:389.8","MESH:C566019","OMIM:191200","MEDGEN:349862","SCTID:55647004"],"synonyms":[{"name":"Dysmelodia","type":"related"},{"name":"amusia, congenital","type":"related"},{"name":"tone deafness","type":"related"},{"name":"tune deafness","type":"exact"}],"termid":"MONDO:0008615","xrefs":{"Monarch":{"xref_id":"0008615"}}}


id: PBO:0044297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC5 antisense RNA 1","termid":"PBO:0044297"}


id: GO:0008771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetate + (citrate (pro-3S)-lyase) (thiol form) = AMP + diphosphate + (citrate (pro-3S)-lyase) (acetyl form).","definition_xrefs":["EC:6.2.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"[citrate (pro-3S)-lyase] ligase activity","secondary_identifiers":["RHEA:23788","KEGG_REACTION:R04449","MetaCyc:CITC-RXN"],"synonyms":[{"name":"acetate: SH-acyl-carrier-protein enzyme ligase (AMP)","type":"related"},{"name":"acetate:HS-citrate lyase ligase activity","type":"related"},{"name":"acetate:citrate-(pro-3S)-lyase(thiol-form) ligase (AMP-forming)","type":"broad"},{"name":"citrate (pro-3S)-lyase ligase activity","type":"related"},{"name":"citrate lyase ligase activity","type":"related"},{"name":"citrate lyase synthetase activity","type":"related"}],"termid":"GO:0008771"}


id: PATO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000821 relative taste acuity value (obsolete PATO:0000821)","termid":"PATO:0000821"}


id: PBO:0005712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Utp23 (predicted)","termid":"PBO:0005712"}


id: PR:O60079
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp12 gene.","definition_xrefs":["UniProtKB:O60079","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.05c","synonyms":[{"name":"Spom972h-ubp12","type":"exact"},{"name":"deubiquitinating enzyme 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60079"}


id: PBO:0085058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonessential serine/threonine protein kinase; possible role in DNA damage response; influences tolerance to high levels of ethanol","termid":"PBO:0085058"}


id: SO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature variant, where the alteration occurs downstream of the transcript termination site.","direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_transcript_variant","synonyms":[{"name":"downstream transcript variant","type":"exact"}],"termid":"SO:0001987"}


id: MONDO:0006547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any change in the skin which affects its appearance or texture. A rash may be localized to one part of the body, or affect all the skin. Rashes may cause the skin to change color, itch, become warm, bumpy, dry, cracked or blistered, swell and may be painful.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"exanthem","secondary_identifiers":["EFO:1000697","MEDGEN:8732","MESH:D005076","SCTID:271807003","Wikipedia:Exanthem","DOID:0050486","HP:0000988","ICD9:782.1","NCIT:C39594","UMLS:C0015230"],"synonyms":[{"name":"Rash","type":"exact"},{"name":"cutaneous eruption","type":"exact"},{"name":"exanthem","type":"exact"},{"name":"exanthem (disease)","type":"exact"},{"name":"exanthema","type":"exact"},{"name":"skin Rash","type":"exact"},{"name":"skin eruption","type":"exact"}],"termid":"MONDO:0006547","xrefs":{"Monarch":{"xref_id":"0006547"}}}


id: MONDO:0018167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary essential cutis verticis gyrata is a rare, progressive dermis disorder characterized by thickening of the scalp resulting in redundancy of the skin which gives rise to folds and grooves that give the scalp a cerebriform appearance. Folds cannot be corrected by pressure or traction and typically are symmetric and extend anteroposteriorly from vertex to occiput and/or transversely in occipital region. Additional features may include mild subungual hyperkeratosis and distal onycholysis of the nail plates of the great toes. It is not associated with neurological and ophthalmological changes, nor with secondary causes.","definition_xrefs":["Orphanet:357220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutis verticis gyrata","termid":"MONDO:0019033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"primary essential cutis verticis gyrata","secondary_identifiers":["icd11.foundation:895947895","GARD:21537","SCTID:765135003","UMLS:C4707327","MEDGEN:1632625"],"termid":"MONDO:0018167","xrefs":{"Monarch":{"xref_id":"0018167"}}}


id: SO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TCS element is a (yeast) transcription factor binding site, bound by the TEA DNA binding domain (DBD) of transcription factors. The consensus site is CATTCC or CATTCT.","definition_xrefs":["PMID:20118212","SO:ke","PMID:1489142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCS_element","synonyms":[{"name":"TCS element","type":"exact"},{"name":"TEA Consensus Sequence ","type":"exact"}],"termid":"SO:0002044"}


id: GO:1902684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor localization to synapse.","definition_xrefs":["GOC:kmv","GO_REF:0000058","GOC:TermGenie","PMID:22252129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"negatively_regulates","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor localization to synapse","synonyms":[{"name":"down regulation of receptor localisation to synapse","type":"exact"},{"name":"down regulation of receptor localization to synapse","type":"exact"},{"name":"down-regulation of receptor localisation to synapse","type":"exact"},{"name":"down-regulation of receptor localization to synapse","type":"exact"},{"name":"downregulation of receptor localisation to synapse","type":"exact"},{"name":"downregulation of receptor localization to synapse","type":"exact"},{"name":"inhibition of receptor localisation to synapse","type":"narrow"},{"name":"inhibition of receptor localization to synapse","type":"narrow"},{"name":"negative regulation of receptor localisation to synapse","type":"exact"}],"termid":"GO:1902684"}


id: MONDO:0013946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the HS6ST1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 15 with or without anosmia","secondary_identifiers":["MEDGEN:766891","DOID:0090075","OMIM:614880","UMLS:C3553977","GARD:15872"],"synonyms":[{"name":"HH15","type":"related"},{"name":"HS6ST1 hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 15 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in HS6ST1","type":"exact"}],"termid":"MONDO:0013946","xrefs":{"Monarch":{"xref_id":"0013946"}}}


id: GO:0044853
data:
  {"annotated_genes":["SJAG_04714","SJAG_04001","SJAG_03536","SJAG_04620"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90258,91156,105154,120539],"is_not":false,"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"A membrane raft that is part of the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft","termid":"GO:0045121"},{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03536":null,"SJAG_04001":null,"SJAG_04620":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane raft","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044853","terms_by_termid":{"GO:0044853":null}}


id: GO:1900749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a (R)-carnitine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","PMID:16365044","PMID:20829798","PMID:20357772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine transport","termid":"GO:0015879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"(R)-carnitine transport","synonyms":[{"name":"(-)-Carnitine transport","type":"related"},{"name":"(-)-L-Carnitine transport","type":"related"},{"name":"(3R)-3-hydroxy-4-(trimethylammonio)butanoate transport","type":"exact"},{"name":"C7H15NO3 transport","type":"related"},{"name":"Carnicor transport","type":"related"},{"name":"Carnitene transport","type":"related"},{"name":"Carnitine transport","type":"related"},{"name":"Carnitor transport","type":"related"},{"name":"L-Carnitine transport","type":"exact"},{"name":"Levocarnitine transport","type":"related"},{"name":"Vitamin BT transport","type":"related"}],"termid":"GO:1900749"}


id: GO:0120225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"nucleoside phosphate binding","termid":"GO:1901265"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"coenzyme A binding","synonyms":[{"name":"CoA binding","type":"exact"}],"termid":"GO:0120225"}


id: PR:Q9USP9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rmn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C902.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.04","synonyms":[{"name":"Spom972h-rmn1","type":"exact"}],"termid":"PR:Q9USP9"}


id: GO:0099155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of noradrenaline (norepinephrine) a presynapse, across a chemical synapse, the subsequent activation of noradrenaline receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dos","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission, noradrenergic","synonyms":[{"name":"noradrenergic synaptic transmission","type":"exact"}],"termid":"GO:0099155"}


id: PBO:0043600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer associated 1","termid":"PBO:0043600"}


id: PBO:0074195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 5","termid":"PBO:0074195"}


id: MOD:01076
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass - OBSOLETE because redundant and identical to MOD:00414. Remap to MOD:00414.","definition_xrefs":["DeltaMass:215"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01076 N-methyl arginyl (obsolete MOD:01076)","termid":"MOD:01076"}


id: PBO:0002765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT I complex subunit Vps28","termid":"PBO:0002765"}


id: GO:0048325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axial mesodermal cell fate determination","termid":"GO:0048324"},{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"negatively_regulates","term_name":"axial mesodermal cell fate determination","termid":"GO:0048323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axial mesodermal cell fate determination","synonyms":[{"name":"down regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"downregulation of axial mesodermal cell fate determination","type":"exact"},{"name":"inhibition of axial mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048325"}


id: PBO:0031570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septation_index","termid":"PBO:0031570"}


id: GO:0002018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an increase in active angiotensin stimulates the adrenal cortices to secrete aldosterone.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of systemic arterial blood pressure","termid":"GO:0003071"},{"relation_name":"is_a","term_name":"regulation of aldosterone secretion","termid":"GO:2000858"},{"relation_name":"part_of","term_name":"regulation of blood volume by renin-angiotensin","termid":"GO:0002016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"renin-angiotensin regulation of aldosterone production","synonyms":[{"name":"renin-angiotensin control of aldosterone production","type":"related"}],"termid":"GO:0002018"}


id: GO:0016849
data:
  {"annotated_genes":["SJAG_01254","SJAG_01260","SJAG_03328","SJAG_00754","SJAG_04907"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004016"},{"annotations":[74654,80754,119672,73204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a phosphorus-oxygen bond by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01254":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphorus-oxygen lyase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:4.6.-.-"],"termid":"GO:0016849","terms_by_termid":{"GO:0000213":null,"GO:0004016":null}}


id: MONDO:0003398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loss of the ability to form new memories beyond a certain point in time. This condition may be organic or psychogenic in origin. Organically induced anterograde amnesia may follow craniocerebral trauma; seizures; anoxia; and other conditions which adversely affect neural structures associated with memory formation (e.g., the hippocampus; fornix (brain); mammillary bodies; and anterior thalamic nuclei). (From Memory 1997 Jan-Mar;5(1-2):49-71)","definition_xrefs":["MESH:D020324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amnestic disorder","termid":"MONDO:0001152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"anterograde amnesia","secondary_identifiers":["ICD10CM:R41.1","DOID:5340","UMLS:C0233795","icd11.foundation:661071789","MEDGEN:115938"],"termid":"MONDO:0003398","xrefs":{"Monarch":{"xref_id":"0003398"}}}


id: GO:0004618
data:
  {"annotated_genes":["SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71698],"is_not":false,"summary":null,"term":"GO:0004618"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + ATP = 3-phospho-D-glyceroyl phosphate + ADP + H+.","definition_xrefs":["RHEA:14801","EC:2.7.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoglycerate kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PHOSGLYPHOS-RXN","Reactome:R-HSA-70486","Reactome:R-HSA-71850","KEGG_REACTION:R01512"],"synonyms":[{"name":"3-PGK","type":"related"},{"name":"3-phosphoglycerate kinase activity","type":"related"},{"name":"3-phosphoglycerate phosphokinase activity","type":"related"},{"name":"3-phosphoglyceric acid kinase activity","type":"related"},{"name":"3-phosphoglyceric acid phosphokinase activity","type":"related"},{"name":"3-phosphoglyceric kinase activity","type":"related"},{"name":"ATP-3-phospho-D-glycerate-1-phosphotransferase activity","type":"related"},{"name":"ATP:3-phospho-D-glycerate 1-phosphotransferase activity","type":"related"},{"name":"ATP:D-3-phosphoglycerate 1-phosphotransferase activity","type":"related"},{"name":"PGK","type":"related"},{"name":"glycerate 3-phosphate kinase activity","type":"related"},{"name":"glycerophosphate kinase activity","type":"related"},{"name":"phosphoglyceric acid kinase activity","type":"related"},{"name":"phosphoglyceric kinase activity","type":"related"},{"name":"phosphoglycerokinase activity","type":"related"}],"termid":"GO:0004618","terms_by_termid":{"GO:0004618":null}}


id: PBO:0069260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 516, pseudogene","termid":"PBO:0069260"}


id: PBO:0072812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 8","termid":"PBO:0072812"}


id: PBO:0017561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme E2 Hus5","termid":"PBO:0017561"}


id: PBO:0005139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XP-C family","termid":"PBO:0005139"}


id: PBO:0113742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 5","termid":"PBO:0113742"}


id: PBO:0060321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IA","termid":"PBO:0060321"}


id: PBO:0063175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenazine biosynthesis like protein domain containing","termid":"PBO:0063175"}


id: PATO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer that has mass near a gravitational body.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Weight"],"direct_ancestors":[{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"weight","termid":"PATO:0000128"}


id: SO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequencer read of a genomic DNA substrate.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_DNA_read","synonyms":[{"name":"gDNA read","type":"exact"},{"name":"gDNA_read","type":"exact"},{"name":"genomic DNA read","type":"exact"}],"termid":"SO:0001828"}


id: FYPO:0000363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells do not contain peroxisomes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"peroxisomes absent","synonyms":[{"name":"absent peroxisomal morphology","type":"exact"},{"name":"peroxisomal morphology: absent","type":"related"},{"name":"peroxisomes absent during mitotic cell cycle","type":"related"},{"name":"peroxisomes absent during vegetative growth","type":"exact"}],"termid":"FYPO:0000363"}


id: PBO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.16","termid":"PBO:0000610"}


id: MONDO:0017352
data:
  {"annotated_genes":["SJAG_00359"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012393"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00359":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of glutamine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:575171","SCTID:190724004","GARD:21156","Orphanet:289841","ICD9:270.7","UMLS:C0342669"],"termid":"MONDO:0017352","terms_by_termid":{"MONDO:0012393":null},"xrefs":{"Monarch":{"xref_id":"0017352"}}}


id: PBO:0083409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR366W","termid":"PBO:0083409"}


id: GO:0018925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving m-cresol (3-hydroxytoluene), the meta-isoform of cresol. Used to produce agricultural chemicals, and in specialty resins, pharmaceuticals and pressure-sensitive dyes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol metabolic process","termid":"GO:0042212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-cresol metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mcr"],"synonyms":[{"name":"3-hydroxytoluene metabolic process","type":"exact"},{"name":"3-hydroxytoluene metabolism","type":"exact"},{"name":"m-cresol metabolism","type":"exact"},{"name":"meta-cresol metabolic process","type":"exact"},{"name":"meta-cresol metabolism","type":"exact"}],"termid":"GO:0018925"}


id: GO:0052805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of imidazoles, five-membered organic heterocycle containing two nitrogen atoms at positions 1 and 3, or any of its derivatives; compounds containing an imidazole skeleton.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imidazole-containing compound catabolic process","synonyms":[{"name":"imidazole breakdown","type":"exact"},{"name":"imidazole catabolism","type":"exact"},{"name":"imidazole degradation","type":"exact"}],"termid":"GO:0052805"}


id: PBO:0047837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box R2","termid":"PBO:0047837"}


id: MOD:00441
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a geranylgeranyl group.","definition_xrefs":["DeltaMass:0","PubMed:15609361","Unimod:48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"geranylgeranylated residue","synonyms":[{"name":"Geranyl-geranyl","type":"related"},{"name":"GeranylGeranyl","type":"related"},{"name":"Geranylgeranylation","type":"exact"},{"name":"GergerRes","type":"exact"}],"termid":"MOD:00441"}


id: MONDO:0014746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"SLC39A8-CDG","secondary_identifiers":["GARD:17846","DOID:0070266","MEDGEN:899837","Orphanet:468699","OMIM:616721","UMLS:C4225234"],"synonyms":[{"name":"CDG IIn","type":"related"},{"name":"CDG syndrome type IIn","type":"exact"},{"name":"CDG-IIn","type":"exact"},{"name":"CDG2N","type":"exact"},{"name":"SLC39A8 deficiency","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIn","type":"exact"},{"name":"congenital disorder of glycosylation type 2n","type":"exact"},{"name":"congenital disorder of glycosylation type IIn","type":"exact"},{"name":"congenital disorder of glycosylation, type IIn","type":"exact"}],"termid":"MONDO:0014746","xrefs":{"Monarch":{"xref_id":"0014746"}}}


id: FYPO:0005660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of crossover associated with a gene conversion event during meiotic recombination is decreased.","definition_xrefs":["PomBase:mah","PMID:25414342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal frequency of meiotic crossover associated with gene conversion","termid":"FYPO:0005658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"decreased frequency of meiotic crossover associated with gene conversion","synonyms":[{"name":"decreased levels of meiotic crossover associated with a gene conversion event","type":"exact"},{"name":"reduced frequency of meiotic crossover associated with gene conversion","type":"exact"}],"termid":"FYPO:0005660"}


id: PBO:0072904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory carrier membrane protein 2","termid":"PBO:0072904"}


id: PBO:0086272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with 2-aminoadipate transaminase activity; shares amino acid similarity with the aminotransferases Aro8p and Aro9p; YER152C is not an essential gene","termid":"PBO:0086272"}


id: GO:0046497
data:
  {"annotated_genes":["SJAG_00957","SJAG_04467","SJAG_03298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90840,111567,92477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide nucleotides, any nucleotide that contains combined nicotinate (pyridine 3-carboxylic acid, or niacin).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleotide metabolic process","termid":"GO:0019362"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_03298":null,"SJAG_04467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nicotinate nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nicotinate nucleotide metabolism","type":"exact"}],"termid":"GO:0046497","terms_by_termid":{"GO:0019358":null}}


id: GO:0030311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly-N-acetyllactosamine, a carbohydrate composed of N-acetyllactosamine repeats (Gal-beta-1,4-GlcNAc-beta-1,3)n.","definition_xrefs":["PMID:9405606","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan biosynthetic process","termid":"GO:0006023"},{"relation_name":"is_a","term_name":"poly-N-acetyllactosamine metabolic process","termid":"GO:0030309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly-N-acetyllactosamine biosynthetic process","synonyms":[{"name":"poly-N-acetyllactosamine anabolism","type":"exact"},{"name":"poly-N-acetyllactosamine biosynthesis","type":"exact"},{"name":"poly-N-acetyllactosamine formation","type":"exact"},{"name":"poly-N-acetyllactosamine synthesis","type":"exact"}],"termid":"GO:0030311"}


id: PBO:0086244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may be involved in nonsense-mediated mRNA decay; interacts with Nam7p, relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0086244"}


id: PBO:0061138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME2 pseudogene 2","termid":"PBO:0061138"}


id: PBO:0087043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L20A; homologous to mammalian ribosomal protein L18A, no bacterial homolog; RPL20A has a paralog, RPL20B, that arose from the whole genome duplication","termid":"PBO:0087043"}


id: PBO:0064731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 67","termid":"PBO:0064731"}


id: GO:0004287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Pro-Xaa > Ala-Xaa in oligopeptides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete prolyl oligopeptidase activity (obsolete GO:0004287)","synonyms":[{"name":"endoprolylpeptidase activity","type":"related"},{"name":"post-proline cleaving enzyme activity","type":"related"},{"name":"post-proline endopeptidase activity","type":"related"},{"name":"proline endopeptidase activity","type":"related"},{"name":"proline-specific endopeptidase activity","type":"related"},{"name":"prolyl endopeptidase activity","type":"related"},{"name":"prolyl oligopeptidase activity","type":"exact"}],"termid":"GO:0004287"}


id: PBO:0028490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-separate_mitotic_half_spindles_present","termid":"PBO:0028490"}


id: PBO:0073333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 9","termid":"PBO:0073333"}


id: MOD:00954
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues with a covalent bond and the loss of water.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked residues with loss of water","termid":"MOD:00954"}


id: GO:0071041
data:
  {"annotated_genes":["SJAG_01717","SJAG_03745","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108194,90187,72359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of antisense transcripts, i.e. transcripts that were produced from the antisense strand of a gene that produces a gene product and which often have a regulatory effect on the transcription of that gene product.","definition_xrefs":["GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antisense RNA metabolic process","termid":"GO:0042868"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01717":null,"SJAG_03745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antisense RNA transcript catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0071041","terms_by_termid":{"GO:0071040":null}}


id: GO:1900948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of isoprene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"negative regulation of isoprene metabolic process","termid":"GO:1900945"},{"relation_name":"is_a","term_name":"regulation of isoprene biosynthetic process","termid":"GO:1900947"},{"relation_name":"negatively_regulates","term_name":"isoprene biosynthetic process","termid":"GO:0043612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of isoprene biosynthetic process","synonyms":[{"name":"down regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"down regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"down regulation of hemiterpene biosynthesis","type":"exact"},{"name":"down regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"down regulation of isoprene biosynthetic process","type":"exact"},{"name":"down-regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"down-regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"down-regulation of hemiterpene biosynthesis","type":"exact"},{"name":"down-regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"down-regulation of isoprene biosynthetic process","type":"exact"},{"name":"downregulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"downregulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"downregulation of hemiterpene biosynthesis","type":"exact"},{"name":"downregulation of hemiterpene biosynthetic process","type":"exact"},{"name":"downregulation of isoprene biosynthetic process","type":"exact"},{"name":"inhibition of 2-methyl-1,3-butadiene biosynthesis","type":"narrow"},{"name":"inhibition of 2-methyl-1,3-butadiene biosynthetic process","type":"narrow"},{"name":"inhibition of hemiterpene biosynthesis","type":"narrow"},{"name":"inhibition of hemiterpene biosynthetic process","type":"narrow"},{"name":"inhibition of isoprene biosynthetic process","type":"narrow"},{"name":"negative regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"negative regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"negative regulation of hemiterpene biosynthesis","type":"exact"},{"name":"negative regulation of hemiterpene biosynthetic process","type":"exact"}],"termid":"GO:1900948"}


id: GO:0009070
data:
  {"annotated_genes":["SJAG_01880","SJAG_01766","SJAG_02972","SJAG_03914","SJAG_02450","SJAG_04305","SJAG_02791","SJAG_00234","SJAG_00881","SJAG_04449","SJAG_00582","SJAG_03152","SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[67673,60950,77918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[73875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[73827,75088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[72885,117767,75359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[112462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[81376,118896,61477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00582":null,"SJAG_00881":null,"SJAG_01766":null,"SJAG_01880":null,"SJAG_02313":null,"SJAG_02450":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03152":null,"SJAG_03914":null,"SJAG_04305":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"serine family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid anabolism","type":"exact"},{"name":"serine family amino acid biosynthesis","type":"exact"},{"name":"serine family amino acid formation","type":"exact"},{"name":"serine family amino acid synthesis","type":"exact"}],"termid":"GO:0009070","terms_by_termid":{"GO:0006535":null,"GO:0006545":null,"GO:0006564":null,"GO:0009090":null,"GO:0019264":null,"GO:0019344":null,"GO:0071269":null}}


id: MONDO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymoma type AB (obsolete MONDO:0002589)","termid":"MONDO:0002589","xrefs":{"Monarch":{"xref_id":"0002589"}}}


id: FYPO:0001661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular cAMP level","termid":"FYPO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular cAMP level","synonyms":[{"name":"increased cAMP accumulation","type":"related"},{"name":"increased cellular cAMP level during mitotic cell cycle","type":"related"},{"name":"increased cellular cAMP level during vegetative growth","type":"exact"},{"name":"increased cellular cyclic AMP level","type":"exact"}],"termid":"FYPO:0001661"}


id: PR:P87127
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase mitochondrial F1 complex assembly factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00582","PANTHER:PTHR13126:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein atp11, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.12","secondary_identifiers":["UniProtKB:P87127"],"synonyms":[{"name":"Spom972h-ATPAF1","type":"exact"}],"termid":"PR:P87127"}


id: MONDO:0012007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scimitar anomaly, multiple cardiac malformations, and craniofacial and central nervous system abnormalities","secondary_identifiers":["MEDGEN:331265","UMLS:C1842315","MESH:C564262","OMIM:608281"],"synonyms":[{"name":"anomalous pulmonary Venous return, multiple Cardiac malformations, and craniofacial and central nervous system abnormalities","type":"related"},{"name":"scimitar anomaly, multiple cardiac malformations, and craniofacial and central nervous system abnormalities","type":"exact"}],"termid":"MONDO:0012007","xrefs":{"Monarch":{"xref_id":"0012007"}}}


id: PBO:0083586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YAR060C has a paralog, YHR212C, that arose from a segmental duplication","termid":"PBO:0083586"}


id: MONDO:0004880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease in which the causes of the disease is a perturbation of the lower digestive tract leading to its dysfunction.","definition_xrefs":["MONDO:patterns/disease_by_dysfunctional_structure"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"bowel dysfunction","secondary_identifiers":["UMLS:C2004461","SCTID:235594008","DOID:9779","ICD9:564.9","MEDGEN:384468"],"synonyms":[{"name":"disease of lower digestive tract","type":"exact"},{"name":"lower digestive tract disease","type":"exact"}],"termid":"MONDO:0004880","xrefs":{"Monarch":{"xref_id":"0004880"}}}


id: SO:0001097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with iron ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_iron_ion_contact_site","secondary_identifiers":["BS:00137"],"synonyms":[{"name":"Fe_contact_site","type":"exact"},{"name":"polypeptide iron ion contact site","type":"exact"}],"termid":"SO:0001097"}


id: MONDO:0017819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dentin dysplasia type I","termid":"MONDO:0007436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical dentin dysplasia due to SMOC2 deficiency","secondary_identifiers":["GARD:17433","Orphanet:314721","UMLS:C5190802","MEDGEN:1673452"],"synonyms":[{"name":"dentin dysplasia type 1 with microdontia and shape anomalies","type":"exact"}],"termid":"MONDO:0017819","xrefs":{"Monarch":{"xref_id":"0017819"}}}


id: PBO:0069569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 841, pseudogene","termid":"PBO:0069569"}


id: PBO:0015713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ER associated ubiquitin-dependent protein catabolic process Vms1 (predicted)","termid":"PBO:0015713"}


id: PATO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flexibility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"flexible","termid":"PATO:0001544"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased flexibility","synonyms":[{"name":"low flexibility","type":"exact"}],"termid":"PATO:0001777"}


id: MONDO:0700246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any eye disorder in which the cause of the disease is a variant in the PAX6 gene itself or a variant within another locus that results in defective regulation of the PAX6 gene.","definition_xrefs":["PMID:26394807","PMID:17679951","PMID:24290376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular dysgenesis caused by defects in PAX6 regulation","termid":"MONDO:0700246","xrefs":{"Monarch":{"xref_id":"0700246"}}}


id: PBO:0050471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA cluster antisense RNA 3","termid":"PBO:0050471"}


id: FYPO:0007612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription from STREP promoter","synonyms":[{"name":"decreased transcription from STREP promoter during mitotic cell cycle","type":"related"},{"name":"decreased transcription from STREP promoter during vegetative growth","type":"exact"},{"name":"reduced transcription from STREP promoter","type":"exact"}],"termid":"FYPO:0007612"}


id: PBO:0054429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1825","termid":"PBO:0054429"}


id: GO:0015724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of formate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"formate transport","termid":"GO:0015724"}


id: PBO:0073225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semenogelin 1","termid":"PBO:0073225"}


id: GO:0015692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lead (Pb) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lead ion transport","termid":"GO:0015692"}


id: MOD:01974
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to S-methyl-L-methionine.","definition_xrefs":["PubMed:23532849","RESID:AA0616","ChEBI:17728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated methionine","termid":"MOD:00716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"S-methyl-L-methionine","synonyms":[{"name":"(2S)-2-amino-4-(dimethylsulfonio)butanoate","type":"exact"},{"name":"(3S)-(3-amino-3-carboxypropyl)dimethylsulfanium","type":"exact"},{"name":"S-methyl-L-methionine","type":"exact"},{"name":"S-methylmethionine","type":"exact"},{"name":"S-methylmethioninium","type":"exact"},{"name":"[(3S)-3-amino-3-carboxypropyl](dimethyl)sulfonium","type":"exact"},{"name":"vitamin U","type":"exact"}],"termid":"MOD:01974"}


id: PBO:0063073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPLN antisense RNA 1","termid":"PBO:0063073"}


id: PBO:0086351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase sodium pump; involved in Na+ efflux to allow salt tolerance; likely not involved in Li+ efflux","termid":"PBO:0086351"}


id: GO:0000826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation of inositol phosphates which possess diphosphate bonds.","definition_xrefs":["PMID:16429326","GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol pyrophosphate synthase activity (obsolete GO:0000826)","synonyms":[{"name":"inositol diphosphate synthase activity","type":"exact"},{"name":"inositol pyrophosphate synthase activity","type":"exact"}],"termid":"GO:0000826"}


id: PBO:0073740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 7","termid":"PBO:0073740"}


id: GO:0002540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of any leukotriene following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate metabolite production involved in inflammatory response","termid":"GO:0002538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukotriene production involved in inflammatory response","synonyms":[{"name":"leukotriene production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002540"}


id: FYPO:0001573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to rapamycin is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA level during cellular response to rapamycin","synonyms":[{"name":"increased RNA accumulation during cellular response to rapamycin","type":"related"},{"name":"increased RNA level during cellular response to rapamycin during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to rapamycin during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to rapamycin","type":"narrow"},{"name":"increased transcript level during cellular response to rapamycin","type":"exact"}],"termid":"FYPO:0001573"}


id: PBO:0069881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1169, pseudogene","termid":"PBO:0069881"}


id: SO:0000103
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The end of the clone insert.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"clone_insert","termid":"SO:0000753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone_insert_end","synonyms":[{"name":"clone insert end","type":"exact"}],"termid":"SO:0000103"}


id: GO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving globosides, globotetraosylceramides, ceramides containing a core structure of GalNAc-beta-(1->3)-Gal-alpha-(1->4)-Glc(I). Globosides are the major neutral glycosphingolipid in normal kidneys and erythrocytes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"globoside metabolic process","synonyms":[{"name":"globoside metabolism","type":"exact"}],"termid":"GO:0001575"}


id: PBO:0063226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH10 divergent transcript","termid":"PBO:0063226"}


id: PBO:0080687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIZ pseudogene 1","termid":"PBO:0080687"}


id: PBO:0049510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 17","termid":"PBO:0049510"}


id: GO:0014872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a myoblast into daughter cells. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast division","termid":"GO:0014872"}


id: PBO:0000956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Not1 (predicted)","termid":"PBO:0000956"}


id: SO:0002154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genomic region where there is an exchange of genetic material with another genomic region, occurring in somatic cells.","definition_xrefs":["SO:ke","NCBI:cf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic_recombination_region","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:mitotic","type":"exact"},{"name":"INSDC_qualifier:mitotic_recombination","type":"exact"},{"name":"mitotic recombination region","type":"exact"}],"termid":"SO:0002154"}


id: MONDO:0032829
data:
  {"annotated_genes":["SJAG_01713"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88759],"is_not":false,"summary":null,"term":"MONDO:0032829"}]},"cv_name":"mondo","definition":"Neurodevelopmental disorder in which the cause of the disease is a variation in the POLR2A gene; it is characterized by early-onset hypotonia, delayed walking, poor speech, and impaired intellectual development. Other features may include feeding difficulties, dysmorphic features, and visual problems. Brain magnetic resonance imaging tends to show delayed myelination, thin corpus callosum, and/or enlarged ventricles.","definition_xrefs":["PMID:31353023","PMID:35328024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and variable intellectual and behavioral abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684818","OMIM:618603","UMLS:C5231423"],"synonyms":[{"name":"NEDHIB","type":"exact"},{"name":"POLR2A-Related Disorders","type":"exact"},{"name":"POLR2A-associated neurodevelopmental disability","type":"exact"},{"name":"POLR2A-related disorder","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia and variable intellectual and behavioral abnormalities","type":"exact"}],"termid":"MONDO:0032829","terms_by_termid":{"MONDO:0032829":null},"xrefs":{"Monarch":{"xref_id":"0032829"}}}


id: GO:0007129
data:
  {"annotated_genes":["SJAG_00727","SJAG_02606","SJAG_04950","SJAG_03926","SJAG_02286","SJAG_03698","SJAG_04143"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80617,89567,109756,112507,113186],"is_not":false,"summary":null,"term":"GO:0007129"},{"annotations":[91417,119053],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle process where side by side pairing and physical juxtaposition of homologous chromosomes is created during meiotic prophase. Homologous chromosome pairing begins when the chromosome arms begin to pair from the clustered telomeres and ends when synaptonemal complex or linear element assembly is complete.","definition_xrefs":["PMID:31811152","GOC:mtg_cell_cycle","PMID:22582262","PMID:23117617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_02286":null,"SJAG_02606":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_04143":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"homologous chromosome pairing at meiosis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Synapsis"],"synonyms":[{"name":"chromosomal pairing","type":"related"},{"name":"chromosomal synapsis","type":"narrow"},{"name":"synapsis","type":"narrow"}],"termid":"GO:0007129","terms_by_termid":{"GO:0007129":null,"GO:0030999":null}}


id: PBO:0028011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_horsetail-astral_microtubule_array","termid":"PBO:0028011"}


id: MONDO:0010208
data:
  {"annotated_genes":["SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87419],"is_not":false,"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","definition":"A type of cutis laxa that is characterized by wrinkling of the skin of the dorsum of the hands and feet, an increased number of palmar and plantar creases, wrinkled abdominal skin, multiple skeletal abnormalities (joint laxity and congenital hip dislocation), late closing of the anterior fontanel, microcephaly, pre- and postnatal growth retardation, developmental delay and facial dysmorphism (a broad nasal bridge, downslanting palpebral fissures and hypertelorism).","definition_xrefs":["Orphanet:2834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 2A","termid":"MONDO:0018163"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0004736","MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"wrinkly skin syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0406587","icd11.foundation:638767040","MESH:C536750","DOID:0112171","MEDGEN:98030","ICD9:259.8","OMIM:278250","GARD:273","SCTID:238875009"],"synonyms":[{"name":"WSS","type":"exact"},{"name":"wrinkled skin syndrome","type":"exact"},{"name":"wrinkly skin syndrome","type":"exact"}],"termid":"MONDO:0010208","terms_by_termid":{"MONDO:0010208":null},"xrefs":{"Monarch":{"xref_id":"0010208"}}}


id: GO:0008822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete crotonobetaine/carnitine-CoA ligase activity (obsolete GO:0008822)","synonyms":[{"name":"crotonobetaine/carnitine-CoA ligase activity","type":"exact"}],"termid":"GO:0008822"}


id: GO:1901244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter to protect the cell or organism in response to the presence of a fungus.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus (obsolete GO:1901244)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in defence response to fungi","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defence response to fungus","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defense response to fungi","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defense response to fungus","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in defence response to fungi","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defence response to fungus","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defense response to fungi","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defense response to fungus","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defence response to fungi","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defence response to fungus","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defense response to fungi","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defense response to fungus","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defence response to fungi","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defence response to fungus","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defense response to fungi","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defense response to fungus","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in defence response to fungi","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defence response to fungus","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defense response to fungi","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defense response to fungus","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defence response to fungi","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defence response to fungus","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungi","type":"exact"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defence response to fungi","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defence response to fungus","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defense response to fungi","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defense response to fungus","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defence response to fungi","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defence response to fungus","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defense response to fungi","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defense response to fungus","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defence response to fungi","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defence response to fungus","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defense response to fungi","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defense response to fungus","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defence response to fungi","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defence response to fungus","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defense response to fungi","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defense response to fungus","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defence response to fungi","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defence response to fungus","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defense response to fungi","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defense response to fungus","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defence response to fungi","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defence response to fungus","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defense response to fungi","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defense response to fungus","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defence response to fungi","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defence response to fungus","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defense response to fungi","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defense response to fungus","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defence response to fungi","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defence response to fungus","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defense response to fungi","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defense response to fungus","type":"exact"}],"termid":"GO:1901244"}


id: MONDO:0008394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Silver-Russell syndrome is characterized by growth retardation with antenatal onset, characteristic facies and limb asymmetry.","definition_xrefs":["Orphanet:813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silver-Russell syndrome","secondary_identifiers":["GARD:4870","icd11.foundation:735297495","MEDGEN:104492","UMLS:C0175693","DOID:14681","MedDRA:10062282","MESH:D056730","SCTID:15069006","OMIMPS:180860","ICD9:759.89","NCIT:C85068"],"synonyms":[{"name":"Russell Silver syndrome","type":"exact"},{"name":"Russell-Silver Syndrome","type":"exact"},{"name":"Russell-Silver dwarfism","type":"exact"},{"name":"Russell-Silver syndrome","type":"exact"},{"name":"SRS","type":"exact"},{"name":"Silver Russell dwarfism","type":"exact"},{"name":"Silver Russell syndrome","type":"exact"},{"name":"Silver-Russell dwarfism","type":"exact"},{"name":"Silver-Russell syndrome","type":"exact"}],"termid":"MONDO:0008394","xrefs":{"Monarch":{"xref_id":"0008394"}}}


id: PBO:0027767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytosolic_calcium_level","termid":"PBO:0027767"}


id: MONDO:0022714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chester porphyria is a unique type of porphyria with the signs and symptoms of acute intermittent porphyria (AIP) and the biochemical defects of both AIP and variegate porphyria (VP). Chester porphyria does not conform to any of the recognized types of acute porphyria. The symptoms associated with Chester porphyria are similar to those observed in other acute porphyrias. Treatment is symptomatic.","definition_xrefs":["GARD:0010185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019142","MONDO:0005093"],"is_obsolete":false,"name":"chester porphyria","secondary_identifiers":["MEDGEN:82789","OMIM:176010","UMLS:C0268322"],"synonyms":[{"name":"PORC","type":"related"},{"name":"porphyria, Chester type","type":"related"}],"termid":"MONDO:0022714","xrefs":{"Monarch":{"xref_id":"0022714"}}}


id: GO:0033214
data:
  {"annotated_genes":["SJAG_02834","SJAG_02735","SJAG_03667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62546,62874,71049],"is_not":false,"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"A process in which iron (Fe3+) is solubilized by ferric iron-specific chelators, known as siderophores, excreted by a cell; the iron-siderophore complex is then transported into the cell by specific cell surface receptors.","definition_xrefs":["GOC:mah","PMID:16963626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"is_a","term_name":"iron coordination entity transport","termid":"GO:1901678"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null,"SJAG_03667":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0098771","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"siderophore-dependent iron import into cell","references_by_uniquename":{"GO_REF:0000108":null},"secondary_identifiers":["GO:0033213","GO:0015688","Reactome:R-HSA-1222449"],"synonyms":[{"name":"iron assimilation by capture and transport","type":"related"},{"name":"iron assimilation by chelation and transport","type":"exact"},{"name":"iron chelate transport","type":"broad"}],"termid":"GO:0033214","terms_by_termid":{"GO:0033214":null}}


id: PBO:0041920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBR3 antisense RNA 1","termid":"PBO:0041920"}


id: PBO:0085504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; has an extraribosomal function in regulation of RPS28B, in which Rps28Ap binds to a decapping complex via Edc3p, which then binds to RPS28B mRNA leading to its decapping and degradation; homologous to mammalian ribosomal protein S28, no bacterial homolog; RPS28A has a paralog, RPS28B, that arose from the whole genome duplication","termid":"PBO:0085504"}


id: PBO:0077069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 3 pseudogene 1","termid":"PBO:0077069"}


id: PR:O36022
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mnn9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan polymerase complex subunit mnn9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.10c","synonyms":[{"name":"Spom972h-mnn9","type":"exact"}],"termid":"PR:O36022"}


id: MONDO:0004101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary carcinoma arising from the thyroid gland from multiple foci.","definition_xrefs":["NCIT:C37304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland papillary carcinoma","termid":"MONDO:0005075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"multicentric papillary thyroid carcinoma","secondary_identifiers":["DOID:7086","MEDGEN:235340","UMLS:C1334817"],"synonyms":[{"name":"multicentric papillary thyroid carcinoma","type":"exact"},{"name":"multicentric papillary thyroid gland carcinoma","type":"exact"},{"name":"multicentric thyroid gland papillary carcinoma","type":"exact"}],"termid":"MONDO:0004101","xrefs":{"Monarch":{"xref_id":"0004101"}}}


id: PATO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter X.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"x-shaped","termid":"PATO:0002429"}


id: GO:0072566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 1 production","synonyms":[{"name":"CXCL1 production","type":"exact"},{"name":"KC production","type":"exact"},{"name":"SCYB1 production","type":"exact"},{"name":"keratinocyte derived chemokine production","type":"exact"}],"termid":"GO:0072566"}


id: PR:O94542
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pxd1 gene.","definition_xrefs":["UniProtKB:O94542","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1322.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.02","synonyms":[{"name":"Spom972h-pxd1","type":"exact"}],"termid":"PR:O94542"}


id: PBO:0111930
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZnF type","termid":"PBO:0111930"}


id: GO:0003304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the myocardium bends along a linear axis and contributes to the process of heart jogging.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"heart jogging","termid":"GO:0003146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myocardial epithelial involution involved in heart jogging","termid":"GO:0003304"}


id: PBO:0050503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC cluster antisense RNA 3","termid":"PBO:0050503"}


id: GO:0031999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of fatty acid beta-oxidation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation","termid":"GO:0031998"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid oxidation","termid":"GO:0046322"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"negatively_regulates","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fatty acid beta-oxidation","synonyms":[{"name":"down regulation of fatty acid beta-oxidation","type":"exact"},{"name":"down-regulation of fatty acid beta-oxidation","type":"exact"},{"name":"downregulation of fatty acid beta-oxidation","type":"exact"},{"name":"inhibition of fatty acid beta-oxidation","type":"narrow"}],"termid":"GO:0031999"}


id: PBO:0058396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4768","termid":"PBO:0058396"}


id: PR:Q9UT02
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec71 gene.","definition_xrefs":["UniProtKB:Q9UT02","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec71 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.01c","synonyms":[{"name":"Spom972h-sec71","type":"exact"}],"termid":"PR:Q9UT02"}


id: MONDO:1010590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"},{"relation_name":"is_a","term_name":"congenital hypothyroidism, sheep","termid":"MONDO:1010606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, sheep","secondary_identifiers":["OMIA:000424-9940"],"termid":"MONDO:1010590","xrefs":{"Monarch":{"xref_id":"1010590"}}}


id: MONDO:0011445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the SPG11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 11","secondary_identifiers":["NCIT:C148317","GARD:4919","MEDGEN:388073","UMLS:C1858479","DOID:0110764","OMIM:604360","Orphanet:2822","SCTID:715491000"],"synonyms":[{"name":"HSP-TCC","type":"exact"},{"name":"Nakamura Osame syndrome","type":"related"},{"name":"Nakamura-Osame syndrome","type":"exact"},{"name":"SPG11","type":"exact"},{"name":"SPG11 hereditary spastic paraplegia","type":"exact"},{"name":"autosomal recessive spastic paraplegia 11","type":"exact"},{"name":"autosomal recessive spastic paraplegia complicated with thin corpus callosum","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 11","type":"exact"},{"name":"autosomal recessive spastic paraplegia with mental impairment and thin corpus callosum","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in SPG11","type":"exact"},{"name":"hereditary spastic paraplegia mental impairment and thin corpus callosum","type":"related"},{"name":"hereditary spastic paraplegia type 11","type":"exact"},{"name":"spastic paraplegia - intellectual deficit - thin corpus callosum","type":"related"},{"name":"spastic paraplegia 11","type":"related"},{"name":"spastic paraplegia 11, autosomal recessive","type":"related"},{"name":"spastic paraplegia, autosomal recessive, complicated, with thin corpus callosum","type":"related"},{"name":"spastic paraplegia, autosomal recessive, with mental impairment and thin corpus callosum","type":"related"},{"name":"spastic paraplegia-intellectual disability-thin corpus callosum syndrome","type":"exact"}],"termid":"MONDO:0011445","xrefs":{"Monarch":{"xref_id":"0011445"}}}


id: GO:1901232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in axis elongation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"convergent extension involved in axis elongation","termid":"GO:0060028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in axis elongation","termid":"GO:1901232"}


id: GO:0046346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannosomine, 2-amino-2-deoxymannose; the D-isomer is a constituent of neuraminic acids as well as mucolipids and mucoproteins.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosamine metabolic process","termid":"GO:0006050"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannosamine catabolic process","synonyms":[{"name":"mannosamine breakdown","type":"exact"},{"name":"mannosamine catabolism","type":"exact"},{"name":"mannosamine degradation","type":"exact"}],"termid":"GO:0046346"}


id: GO:1905687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of diacylglycerol kinase activity.","definition_xrefs":["GO_REF:0000059","GOC:bc","PMID:23091060","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of diacylglycerol kinase activity (obsolete GO:1905687)","synonyms":[{"name":"regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"regulation of DG kinase activity","type":"exact"},{"name":"regulation of DGK activity","type":"exact"},{"name":"regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"regulation of diglyceride kinase activity","type":"exact"},{"name":"regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"}],"termid":"GO:1905687"}


id: GO:0003886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxycytidine in DNA + S-adenosyl-L-methionine = a 5-methyl-2'-deoxycytidine in DNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:13681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"DNA-methyltransferase activity","termid":"GO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"DNA (cytosine-5-)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.37","GO:0008326","MetaCyc:DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"DNA 5-cytosine methylase activity","type":"related"},{"name":"DNA cytosine C(5) methylase activity","type":"related"},{"name":"DNA cytosine C5 methylase activity","type":"related"},{"name":"DNA cytosine methylase activity","type":"broad"},{"name":"DNA-cytosine 5-methylase activity","type":"related"},{"name":"DNA-cytosine methyltransferase activity","type":"broad"},{"name":"S-adenosyl-L-methionine:DNA (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"cytosine 5-methyltransferase activity","type":"related"},{"name":"cytosine DNA methylase activity","type":"broad"},{"name":"cytosine DNA methyltransferase activity","type":"broad"},{"name":"cytosine-specific DNA methyltransferase activity","type":"related"},{"name":"deoxyribonucleic (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"deoxyribonucleic acid (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"deoxyribonucleic methylase activity","type":"broad"},{"name":"methylphosphotriester-DNA methyltransferase activity","type":"related"},{"name":"modification methylase activity","type":"related"},{"name":"restriction-modification system activity","type":"related"},{"name":"site-specific DNA-methyltransferase (cytosine-specific) activity","type":"narrow"},{"name":"type II DNA methylase activity","type":"related"}],"termid":"GO:0003886"}


id: MONDO:0000087
data:
  {"annotated_genes":["SJAG_04003","SJAG_04537","SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012986"},{"annotations":[87299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012399"},{"annotations":[89070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030669"},{"annotations":[86915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014679"},{"annotations":[87856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030482"}]},"cv_name":"mondo","definition":"A developmental brain abnormality characterized by an excessive amount of small convolutions on the surface of the brain and cognitive dysfunction.","definition_xrefs":["NCIT:C116936"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02289":null,"SJAG_04003":null,"SJAG_04537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"polymicrogyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:2081858551","Orphanet:35981","MEDGEN:78605","SCTID:4945003","DOID:0080918","UMLS:C0266464","GARD:18818","NANDO:1201071","MESH:D065706"],"termid":"MONDO:0000087","terms_by_termid":{"MONDO:0012399":null,"MONDO:0012986":null,"MONDO:0014679":null,"MONDO:0030482":null,"MONDO:0030669":null},"xrefs":{"Monarch":{"xref_id":"0000087"}}}


id: MONDO:0005576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryoglobulinemia is a type of vasculitis that is caused by abnormal proteins (antibodies) in the blood called 'cryoglobulins.' At cold temperatures, these proteins become solid or gel-like, which can block blood vessels and cause a variety of health problems. Many people affected by this condition will not experience any unusual signs or symptoms. When present, symptoms vary but may include breathing problems; fatigue; glomerulonephritis ; joint or muscle pain; purpura ; Raynaud's phenomenon ; skin death; and/or skin ulcers. In some cases, the exact underlying cause is unknown; however, cryoglobulinemia can be associated with a variety of conditions including certain types of infection; chronic inflammatory diseases (such as autoimmune disease); and/or cancers of the blood or immune system. Treatment varies based on the severity of the condition, the symptoms present in each person and the underlying cause.","direct_ancestors":[{"relation_name":"is_a","term_name":"type IV hypersensitivity disease","termid":"MONDO:0002459"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cryoglobulinemia","secondary_identifiers":["SCTID:30911005","MESH:D003449","ICD10CM:D89.1","DOID:2917","UMLS:C0010403","EFO:0005846","ICD9:273.2","MEDGEN:3673","NCIT:C26736"],"synonyms":[{"name":"Cryoimmunoglobulinaemia","type":"exact"},{"name":"cryoglobulinemia","type":"exact"}],"termid":"MONDO:0005576","xrefs":{"Monarch":{"xref_id":"0005576"}}}


id: MONDO:0957317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematuria, benign familial","secondary_identifiers":["OMIMPS:141200","MEDGEN:66039","DOID:0111365","MESH:C562476","Orphanet:97562","UMLS:C0241908"],"termid":"MONDO:0957317","xrefs":{"Monarch":{"xref_id":"0957317"}}}


id: MONDO:0100127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toxic bronchiolitis whereby a biospy has shown an obliteration of broncioles.","direct_ancestors":[{"relation_name":"is_a","term_name":"toxic bronchiolitis","termid":"MONDO:0100123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic bronchiolitis obliterans","secondary_identifiers":["SCTID:196027008","MEDGEN:573502","UMLS:C0340046"],"termid":"MONDO:0100127","xrefs":{"Monarch":{"xref_id":"0100127"}}}


id: PBO:0081582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 511","termid":"PBO:0081582"}


id: MONDO:0013509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the GRIN2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 6","secondary_identifiers":["DOID:0070036","GARD:12851","MEDGEN:462761","UMLS:C3151411","OMIM:613970"],"synonyms":[{"name":"GRIN2B autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD6","type":"exact"},{"name":"autosomal dominant intellectual disability 6","type":"exact"},{"name":"autosomal dominant mental retardation 6","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 6","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in GRIN2B","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 6, with or without seizures","type":"exact"},{"name":"intellectual disability, autosomal dominant 6","type":"exact"},{"name":"intellectual disability, autosomal dominant 6, with or without seizures","type":"related"},{"name":"intellectual disability, autosomal dominant type 6","type":"exact"},{"name":"mental retardation, autosomal dominant 6","type":"related"},{"name":"mental retardation, autosomal dominant 6, with or without seizures","type":"related"},{"name":"mental retardation, autosomal dominant type 6","type":"exact"}],"termid":"MONDO:0013509","xrefs":{"Monarch":{"xref_id":"0013509"}}}


id: PBO:0108986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 10","termid":"PBO:0108986"}


id: GO:0061963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:ha","PMID:27689881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"entry into reproductive diapause","termid":"GO:0055116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of entry into reproductive diapause","termid":"GO:0061963"}


id: GO:0045194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of oxidized low-density lipoproteins.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidized low-density lipoprotein catabolic process (obsolete GO:0045194)","synonyms":[{"name":"Ox-LDL catabolic process","type":"exact"},{"name":"Ox-LDL catabolism","type":"exact"},{"name":"oxidized low-density lipoprotein breakdown","type":"exact"},{"name":"oxidized low-density lipoprotein catabolic process","type":"exact"},{"name":"oxidized low-density lipoprotein catabolism","type":"exact"},{"name":"oxidized low-density lipoprotein degradation","type":"exact"}],"termid":"GO:0045194"}


id: PBO:0002500
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post transcriptional regulation of Tsn1 expression","termid":"PBO:0002500"}


id: MONDO:0011438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process of the sebaceous glands which is characterized by comedones, nodules, papules and/or pustules on the skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acne","secondary_identifiers":["MTH:217","HP:0001061","EFO:0003894","MEDGEN:152379","ICD9:706.0","icd11.foundation:1892393023","DOID:6543","NCIT:C27195","UMLS:C0702166"],"synonyms":[{"name":"acne","type":"exact"},{"name":"acne (disease)","type":"exact"},{"name":"acne varioliformis","type":"exact"},{"name":"acne vulgaris","type":"exact"},{"name":"acne, adult","type":"narrow"},{"name":"frontalis acne","type":"exact"}],"termid":"MONDO:0011438","xrefs":{"Monarch":{"xref_id":"0011438"}}}


id: GO:0039526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a viral gene product affects host apoptosis, leading to a change in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16037790","UniProtKB-KW:KW-1119","GOC:bf","GOC:sp","PMID:15225638","GOC:mtg_apoptosis","PMID:12867651"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation by virus of host apoptosis (obsolete GO:0039526)","secondary_identifiers":["VZ:1581"],"synonyms":[{"name":"modulation by virus of host apoptosis","type":"exact"},{"name":"modulation by virus of host apoptotic process","type":"exact"},{"name":"modulation of host cell apoptosis by virus","type":"exact"},{"name":"perturbation by virus of host apoptotic process","type":"exact"},{"name":"regulation by virus of host apoptosis","type":"exact"}],"termid":"GO:0039526"}


id: PR:000027604
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3, initiator methionine removed methylated form that is recognized by the HP1-like protein Swi6 in Schizosaccharomyces pombe. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00663.","definition_xrefs":["PomBase:MAH","PMID:11242054","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me(K9)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K9me","type":"exact"},{"name":"hht3/InitMet-/Me:(K10)","type":"exact"},{"name":"hht3/Me(K9)","type":"exact"}],"termid":"PR:000027604"}


id: MONDO:0018679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"primary cutaneous plasmacytosis","secondary_identifiers":["icd11.foundation:1669369613","Orphanet:451602","MEDGEN:1672491","UMLS:C4736227","GARD:21888"],"termid":"MONDO:0018679","xrefs":{"Monarch":{"xref_id":"0018679"}}}


id: PBO:0035779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitosis","termid":"PBO:0035779"}


id: PBO:0069894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1184, pseudogene","termid":"PBO:0069894"}


id: GO:0019705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a myristoyl (systematic name, tetradecanoyl) group to a sulfur atom on a cysteine residue of a protein molecule in the reaction: tetradecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-tetradecanoyl-L-cysteinyl-[protein].","definition_xrefs":["PMID:22247542","RHEA:59736","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoyltransferase activity","termid":"GO:0019107"},{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"protein-cysteine S-myristoyltransferase activity","termid":"GO:0019705"}


id: GO:0032524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nutrients out of a cell or organelle.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nutrient export (obsolete GO:0032524)","synonyms":[{"name":"nutrient export","type":"exact"}],"termid":"GO:0032524"}


id: GO:0090388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a phagosome membrane to a lysosome membrane that occurs as a part of apoptotic cell clearance. Docking requires only that the proteins come close enough to interact and adhere.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagosome-lysosome docking","termid":"GO:0090384"},{"relation_name":"part_of","term_name":"phagolysosome assembly involved in apoptotic cell clearance","termid":"GO:0090387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0140056","GO:0008150","GO:0051179","GO:0006810","GO:0016192","GO:0044085"],"is_obsolete":false,"name":"phagosome-lysosome docking involved in apoptotic cell clearance","termid":"GO:0090388"}


id: PBO:0018136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein phosphatase involved in unfolded protein response (predicted)","termid":"PBO:0018136"}


id: PBO:0031086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-translation_regulation_phenotype","termid":"PBO:0031086"}


id: FYPO:0002857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutathione synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutathione synthase activity","termid":"FYPO:0002856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abolished glutathione synthase activity","synonyms":[{"name":"abolished GSH synthase activity","type":"exact"},{"name":"abolished glutathione synthetase activity","type":"exact"},{"name":"glutathione synthase activity abolished","type":"exact"}],"termid":"FYPO:0002857"}


id: PBO:0077909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 antisense RNA 1","termid":"PBO:0077909"}


id: PBO:0111822
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAT repeat protein","termid":"PBO:0111822"}


id: PBO:0089646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras GEF Ste6","termid":"PBO:0089646"}


id: PBO:0059222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 4, pseudogene","termid":"PBO:0059222"}


id: GO:1901607
data:
  {"annotated_genes":["SJAG_00635","SJAG_03914","SJAG_03881","SJAG_02791","SJAG_03141","SJAG_03055","SJAG_04577","SJAG_04747","SJAG_04425","SJAG_03614","SJAG_05007","SJAG_01955","SJAG_06635","SJAG_01766","SJAG_04098","SJAG_00495","SJAG_01019","SJAG_04688","SJAG_02689","SJAG_01137","SJAG_00502","SJAG_04149","SJAG_01880","SJAG_02841","SJAG_04549","SJAG_00248","SJAG_03985","SJAG_00592","SJAG_03306","SJAG_02505","SJAG_03562","SJAG_02388","SJAG_00392","SJAG_00695","SJAG_00309","SJAG_02832","SJAG_03266","SJAG_02313","SJAG_01630","SJAG_00830","SJAG_02400","SJAG_00869","SJAG_04459","SJAG_01466","SJAG_03167","SJAG_01455","SJAG_03712","SJAG_04305","SJAG_04054","SJAG_02293","SJAG_02450","SJAG_00234","SJAG_02972","SJAG_01346","SJAG_02290","SJAG_00395","SJAG_03312","SJAG_00359","SJAG_00432","SJAG_04042","SJAG_00412","SJAG_03152","SJAG_04145","SJAG_04449","SJAG_01574","SJAG_04652","SJAG_00636","SJAG_03671","SJAG_00881","SJAG_01404","SJAG_00582","SJAG_01592","SJAG_00107","SJAG_00396","SJAG_00120","SJAG_00660","SJAG_03124","SJAG_01461","SJAG_01061","SJAG_03775","SJAG_03243","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69911,113053,62010,66728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[79477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[80275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"},{"annotations":[112461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[77918,67673,60950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[73217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[73875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[75088,73827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[72885,75359,117767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[113194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042852"},{"annotations":[80273,113041,120397,72057,100033,104522,108447,112420,113871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[104057,112749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[119727,113196,60097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[58040,65331,72880,80210,77455,78376,82099,60382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[112462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[105195,115223,105679,92511,112388,110258,113058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"},{"annotations":[59613,92512,115224,81615,76560,78921,105196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"},{"annotations":[102560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[59085,79582,82096,78656,80137,81008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[100398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[79711,100218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[79646,68767,65667,92711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[61477,118896,81376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"},{"annotations":[70043,79005,75936,75208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[81616,78804,65004,58852,77828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"},{"annotations":[65283,79231,78439,65948,71903,76791,78003,115422,98227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[76312,113934,72654,73605,80851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[74130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"},{"annotations":[65457,78775,62008,71402,113935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[78440,80532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alpha-amino acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic 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synthesis","type":"exact"}],"termid":"GO:1901607","terms_by_termid":{"GO:0000105":null,"GO:0000162":null,"GO:0006532":null,"GO:0006535":null,"GO:0006542":null,"GO:0006545":null,"GO:0006564":null,"GO:0006571":null,"GO:0006592":null,"GO:0009086":null,"GO:0009088":null,"GO:0009090":null,"GO:0009094":null,"GO:0009098":null,"GO:0009099":null,"GO:0019240":null,"GO:0019264":null,"GO:0019280":null,"GO:0019284":null,"GO:0019344":null,"GO:0019509":null,"GO:0019878":null,"GO:0042450":null,"GO:0042852":null,"GO:0055129":null,"GO:0070981":null,"GO:0071266":null,"GO:0071269":null,"GO:0097054":null,"GO:1901705":null}}


id: PBO:0004456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn2 (predicted)","termid":"PBO:0004456"}


id: GO:0047701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a beta-L-arabinoside = L-arabinose + an alcohol.","definition_xrefs":["EC:3.2.1.88"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"beta-L-arabinosidase activity","secondary_identifiers":["MetaCyc:BETA-L-ARABINOSIDASE-RXN"],"synonyms":[{"name":"b-L-arabinosidase activity","type":"exact"},{"name":"beta-L-arabinoside arabinohydrolase activity","type":"related"},{"name":"vicianosidase activity","type":"related"}],"termid":"GO:0047701"}


id: PBO:0055685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoyltransferase 1","termid":"PBO:0055685"}


id: GO:0009022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate.","definition_xrefs":["PMID:2455297","RHEA:10628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0140098","GO:0003824","GO:0140101","GO:0016740"],"is_obsolete":false,"name":"tRNA nucleotidyltransferase activity","secondary_identifiers":["EC:2.7.7.56","MetaCyc:TRNA-NUCLEOTIDYLTRANSFERASE-RXN"],"synonyms":[{"name":"RNase PH activity","type":"related"},{"name":"phosphate-dependent exonuclease activity","type":"related"},{"name":"ribonuclease PH activity","type":"related"}],"termid":"GO:0009022"}


id: PBO:0046306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enamelin","termid":"PBO:0046306"}


id: PBO:0116297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome spacing factor; subunit of INO80 chromatin remodeling complex; involved in positioning and spacing of nucleosomes over most genes independently of transcription; promotes nucleosome shifts in the 3' direction; has a role in modulating stress gene transcription","termid":"PBO:0116297"}


id: PBO:0075803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 2, pseudogene","termid":"PBO:0075803"}


id: PBO:0001901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntingtin-interacting protein homolog","termid":"PBO:0001901"}


id: MOD:01104
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-methoxy-2,3,6-trimethylbenzenesulfonyl","synonyms":[{"name":"Mtr","type":"exact"}],"termid":"MOD:01104"}


id: PBO:0114857
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"there is a gene with the systematic identifier SPBC3B8.10 (ina17)","termid":"PBO:0114857"}


id: GO:0047043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lithocholate + NAD+ = 3-oxo-5beta-cholanate + H+ + NADH.","definition_xrefs":["EC:1.1.1.52","RHEA:19585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-alpha-hydroxycholanate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04139","MetaCyc:1.1.1.52-RXN"],"synonyms":[{"name":"3alpha-hydroxy-5beta-cholanate:NAD+ oxidoreductase activity","type":"related"},{"name":"3alpha-hydroxycholanate dehydrogenase activity","type":"related"},{"name":"alpha-hydroxy-cholanate dehydrogenase activity","type":"related"}],"termid":"GO:0047043"}


id: PBO:0016088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase like PAN complex subunit Ppk26","termid":"PBO:0016088"}


id: PBO:0067490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 624, pseudogene","termid":"PBO:0067490"}


id: MONDO:0005092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive, poorly differentiated invasive adenocarcinoma characterized by the presence of malignant glandular cells in which the nucleus is pressed to one side by the presence of intracytoplasmic mucus. It may arise from the stomach, small and large intestine, ampulla of Vater, appendix, gallbladder, pancreas, lung, bladder, breast, and prostate gland.","definition_xrefs":["NCIT:C3774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"signet ring cell carcinoma","secondary_identifiers":["UMLS:C0206696","ICDO:8490/3","MEDGEN:61663","MESH:D018279","EFO:0000698","DOID:3493"],"synonyms":[{"name":"signet ring carcinoma","type":"exact"},{"name":"signet ring carcinoma NOS (morphologic abnormality)","type":"exact"},{"name":"signet ring cell adenocarcinoma","type":"exact"},{"name":"signet ring cell carcinoma","type":"exact"},{"name":"signet ring cell carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0005092","xrefs":{"Monarch":{"xref_id":"0005092"}}}


id: PR:O13999
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug155 gene.","definition_xrefs":["UniProtKB:O13999","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 155 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.04c","synonyms":[{"name":"Spom972h-mug155","type":"exact"}],"termid":"PR:O13999"}


id: GO:0106411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5'XMP + H20 = phosphate + xanthosine.","definition_xrefs":["PMID:34824243"],"gene_count":0,"genotype_count":0,"name":"obsolete XMP 5'-nucleosidase activity (obsolete GO:0106411)","secondary_identifiers":["MetaCyc:XMPXAN-RXN"],"termid":"GO:0106411"}


id: MONDO:0007413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cyprus facial-neuromusculoskeletal syndrome is an exceedingly rare, genetic malformation syndrome characterized by a striking facial appearance, variable skeletal deformities, and neurological defects.","definition_xrefs":["Orphanet:2674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyprus facial-neuromusculoskeletal syndrome","secondary_identifiers":["SCTID:732261005","UMLS:C1852396","GARD:9487","MEDGEN:343800","OMIM:123853","MESH:C536229"],"synonyms":[{"name":"CYPRUS facial neuromusculoskeletal syndrome","type":"related"},{"name":"unusual facial appearance, skeletal deformities, and musculoskeletal and sensory defects","type":"related"}],"termid":"MONDO:0007413","xrefs":{"Monarch":{"xref_id":"0007413"}}}


id: FYPO:0004057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intragenic meiotic recombination is increased. Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PMID:19436749","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased meiotic recombination","termid":"FYPO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased intragenic meiotic recombination","synonyms":[{"name":"increased meiotic intragenic recombination","type":"exact"}],"termid":"FYPO:0004057"}


id: PBO:0079696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 4","termid":"PBO:0079696"}


id: GO:0061512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cilium","termid":"GO:0061512"}


id: PBO:0089918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein, human endophilin A3-like","termid":"PBO:0089918"}


id: PBO:0089043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and transfer glutaredoxin Grx5","termid":"PBO:0089043"}


id: PBO:0047267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 246 member B","termid":"PBO:0047267"}


id: GO:0019499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration, reacting with the ferric form of cytochrome aa3 and thus blocking the electron transport chain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanide metabolic process","synonyms":[{"name":"cyanide metabolism","type":"exact"}],"termid":"GO:0019499"}


id: PBO:0043766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX16","termid":"PBO:0043766"}


id: GO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Low molecular weight (10-45 kDa) proteins that associate with intermediate filaments by lateral binding of the filaments and have the effect of creating tight macrofilament aggregates.","definition_xrefs":["PMID:9484600","GOC:ajp"],"gene_count":0,"genotype_count":0,"name":"obsolete type I intermediate filament associated protein (obsolete GO:0001722)","synonyms":[{"name":"type I intermediate filament associated protein","type":"exact"}],"termid":"GO:0001722"}


id: PBO:0031835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleolar_morphology","termid":"PBO:0031835"}


id: PBO:0064560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannosyltransferase 1","termid":"PBO:0064560"}


id: FYPO:0006754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which promoter-enhancer looping occurs to a lower extent than normal when the cell is subject to glucose starvation. Promoter-enhancer looping is mediated by interactions between proteins bound to DNA at promoters and at enhancers, or by a single protein binding at both sites.","definition_xrefs":["PMID:28934464","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased promoter-enhancer looping during glucose starvation","synonyms":[{"name":"decreased promoter-enhancer looping during glucose depletion","type":"exact"},{"name":"decreased promoter-enhancer looping during glucose deprivation","type":"exact"}],"termid":"FYPO:0006754"}


id: PBO:0050194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 11","termid":"PBO:0050194"}


id: MONDO:1010718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dihydropyrimidinase deficiency that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydropyrimidinase deficiency, non-human animal","termid":"MONDO:1010109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropyrimidinase deficiency, domestic cat","secondary_identifiers":["OMIA:001776-9685"],"termid":"MONDO:1010718","xrefs":{"Monarch":{"xref_id":"1010718"}}}


id: GO:0045746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Notch signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway","termid":"GO:0008593"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"Notch signaling pathway","termid":"GO:0007219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Notch signaling pathway","secondary_identifiers":["Reactome:R-HSA-9604323"],"synonyms":[{"name":"down regulation of Notch signaling pathway","type":"exact"},{"name":"down-regulation of Notch signaling pathway","type":"exact"},{"name":"downregulation of Notch signaling pathway","type":"exact"},{"name":"inhibition of Notch signaling pathway","type":"narrow"},{"name":"negative regulation of N signaling pathway","type":"exact"},{"name":"negative regulation of N signalling pathway","type":"exact"},{"name":"negative regulation of Notch signalling pathway","type":"exact"}],"termid":"GO:0045746"}


id: PBO:0047586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3 pseudogene 6","termid":"PBO:0047586"}


id: PBO:0040809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD1 antisense RNA 1","termid":"PBO:0040809"}


id: PBO:0079582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 3","termid":"PBO:0079582"}


id: SO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequences that decrease interactions between biological regions, such as between a promoter, its 5' context and/or the translational unit(s) it regulates. Spacers can affect regulation of translation, transcription, and other biological processes.","definition_xrefs":["PMID:24933158","PMID:28422998","PMID:20843779","PMID:27034378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inert_DNA_spacer","secondary_identifiers":["doi:10.1101/584664"],"synonyms":[{"name":"Inert DNA Spacer","type":"related"}],"termid":"SO:0002223"}


id: PBO:0065702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 upregulated regulator of p53 levels","termid":"PBO:0065702"}


id: PBO:0074007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 8","termid":"PBO:0074007"}


id: PATO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A adhesivity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"},{"relation_name":"is_a","term_name":"adhesive","termid":"PATO:0002331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased adhesivity","termid":"PATO:0002333"}


id: PBO:0057423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548x-2","termid":"PBO:0057423"}


id: GO:0097095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the frontonasal suture, between frontal and nasal bones, is generated and organized.","definition_xrefs":["GOC:sl","Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system","PMID:12416537","GOC:pr","Wikipedia:Cranial_sutures"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial suture morphogenesis","termid":"GO:0097094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"frontonasal suture morphogenesis","synonyms":[{"name":"nasofrontal suture morphogenesis","type":"exact"}],"termid":"GO:0097095"}


id: CHEBI:34653
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Congo Red","termid":"CHEBI:34653"}


id: PBO:0071895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 33","termid":"PBO:0071895"}


id: GO:1904392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ciliary neurotrophic factor stimulus.","definition_xrefs":["GOC:TermGenie","PMID:16914133","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to ciliary neurotrophic factor","termid":"GO:1904391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ciliary neurotrophic factor","termid":"GO:1904392"}


id: MONDO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, aggressive malignant mesenchymal neoplasm that arises from the ovary. The prognosis is poor.","definition_xrefs":["NCIT:C8267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian sarcoma","secondary_identifiers":["SCTID:423627007","MEDGEN:128881","UMLS:C0280746","DOID:2146"],"synonyms":[{"name":"ovarian sarcoma","type":"exact"},{"name":"ovary sarcoma","type":"exact"},{"name":"sarcoma of ovary","type":"exact"},{"name":"sarcoma of the ovary","type":"exact"}],"termid":"MONDO:0002225","xrefs":{"Monarch":{"xref_id":"0002225"}}}


id: MONDO:0011495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Langerhans-cell histiocytosis (obsolete MONDO:0011495)","termid":"MONDO:0011495","xrefs":{"Monarch":{"xref_id":"0011495"}}}


id: GO:0031361
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the thylakoid membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of thylakoid membrane (obsolete GO:0031361)","synonyms":[{"name":"integral to thylakoid membrane","type":"narrow"}],"termid":"GO:0031361"}


id: GO:0050884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism voluntarily modulates its posture, the alignment of its anatomical parts.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular process","termid":"GO:0050905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular process controlling posture","synonyms":[{"name":"regulation of posture","type":"exact"}],"termid":"GO:0050884"}


id: PBO:0060658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural cytotoxicity triggering receptor 2","termid":"PBO:0060658"}


id: MONDO:0012275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal valproate syndrome (FVS), is an anticonvulsant drug-related embryofetopathy that can occur when a fetus is exposed to valproic acid (VPA), characterized by distinct facial dysmorphism, congenital anomalies and developmental delay (especially in language and communication).","definition_xrefs":["Orphanet:1906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal valproate syndrome","secondary_identifiers":["NCIT:C98930","MedDRA:10016524","NORD:1141","UMLS:C0236026","OMIM:609442","DOID:0060471","ICD9:759.89","MESH:C536525","GARD:5447","MEDGEN:65922","SCTID:17231009","icd11.foundation:1055155432"],"synonyms":[{"name":"FVS","type":"related"},{"name":"fetal valproate syndrome","type":"exact"},{"name":"fetal valproic acid syndrome","type":"exact"},{"name":"foetal valproic acid syndrome","type":"exact"},{"name":"susceptibility to valproate embryopathy","type":"related"},{"name":"valproate embryopathy, susceptibility to","type":"related"},{"name":"valproic acid embryopathy","type":"related"}],"termid":"MONDO:0012275","xrefs":{"Monarch":{"xref_id":"0012275"}}}


id: MONDO:0957871
data:
  {"annotated_genes":["SJAG_01659"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88337],"is_not":false,"summary":null,"term":"MONDO:0957871"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy with vanishing white matter","termid":"MONDO:0800448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01659":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy with vanishing white matter 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620313","DOID:0070372","MEDGEN:1841041","UMLS:C5830405"],"termid":"MONDO:0957871","terms_by_termid":{"MONDO:0957871":null},"xrefs":{"Monarch":{"xref_id":"0957871"}}}


id: GO:0039621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=13 symmetry. The T=13 capsid is composed of 12 pentameric and 120 hexameric capsomeres.","definition_xrefs":["VZ:260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=13 icosahedral viral capsid","termid":"GO:0039621"}


id: GO:0072127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal capsule over time, from its formation to the mature structure. The renal capsule is the tough fibrous layer surrounding the kidney, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage. During development, it comprises a single layer of flattened cells that lie just above the cortical stroma and the condensed mesenchyme of the nephrogenic zone. It is in this region that the early stages of nephron induction and formation of new generations ureteric bud branches occur, as the kidney expands.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal capsule development","termid":"GO:0072127"}


id: PBO:0013101
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leucine-rich Repeat Protein","termid":"PBO:0013101"}


id: PBO:0108708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 chaperone, CENP-A recruiting complex CENP-A chaperone Mis16","termid":"PBO:0108708"}


id: PBO:0003948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal mitochondrial protein","termid":"PBO:0003948"}


id: PATO:0000504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmic","termid":"PATO:0000504"}


id: PBO:0059913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 36","termid":"PBO:0059913"}


id: PBO:0071097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 99","termid":"PBO:0071097"}


id: GO:0035529
data:
  {"annotated_genes":["SJAG_03091"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74145],"is_not":false,"summary":null,"term":"GO:0035529"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H2O = AMP + NMNH + 2 H+.","definition_xrefs":["PMID:12399474","RHEA:48868","PMID:20181750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide phosphatase activity","termid":"GO:0004551"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03091":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"NADH pyrophosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00103","MetaCyc:RXN0-4401","Reactome:R-HSA-6809287"],"synonyms":[{"name":"NADH diphosphatase activity","type":"exact"},{"name":"NADH pyrophosphohydrolase activity","type":"exact"}],"termid":"GO:0035529","terms_by_termid":{"GO:0035529":null}}


id: PBO:0038278
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eco_evidence","termid":"PBO:0038278"}


id: GO:1990199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ATP-binding cassette (ABC) transporter complex made up of a dimer of MsbA. Facilitates the export across the plasma membrane of, amongst others, lipid A and lipopolysaccharide. In contrast to most ABC transporter complexes, each chain of the homodimer contains both the transmembrane domain (TMD) and the cytoplasmic ATP-binding domain (NBD).","definition_xrefs":["GOC:bhm","PMID:18024585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"MsbA transporter complex","synonyms":[{"name":"MsbA complex","type":"exact"},{"name":"MsbA dimer","type":"exact"}],"termid":"GO:1990199"}


id: PR:P0CT78
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L11-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.10","synonyms":[{"name":"Spom972h-rpl1102","type":"exact"}],"termid":"PR:P0CT78"}


id: SO:0001895
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature ablation whereby the deleted region includes a transcription factor binding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_ablation","termid":"SO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_ablation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"TFBS ablation","type":"exact"},{"name":"VEP:TFBS_ablation","type":"exact"},{"name":"transcription factor binding site ablation","type":"exact"}],"termid":"SO:0001895"}


id: MONDO:1012725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa that occurs in cattle due to a mutation in the LAMA3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa, cattle","termid":"MONDO:1011547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional epidermolysis bullosa, LAMA3-related, cattle","secondary_identifiers":["OMIA:001677-9913"],"synonyms":[{"name":"epidermolysis bullosa, junctionalis, LAMA3-related, cattle","type":"exact"}],"termid":"MONDO:1012725","xrefs":{"Monarch":{"xref_id":"1012725"}}}


id: MONDO:0023569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"corpus callosum, agenesis of","termid":"MONDO:0009022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Kozlowski Ouvrier syndrome","secondary_identifiers":["MEDGEN:444073","UMLS:C2931512","MESH:C537508"],"synonyms":[{"name":"agenesis of the corpus callosum with intellectual disability and osseous lesions","type":"related"},{"name":"agenesis of the corpus callosum with mental retardation and osseous lesions","type":"related"}],"termid":"MONDO:0023569","xrefs":{"Monarch":{"xref_id":"0023569"}}}


id: MONDO:0017100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neutropenia-monocytopenia-deafness syndrome is characterized by neutropenia with myeloid marrow hypoplasia, monocytopenia, and congenital deafness. It has been described in three siblings who suffered recurrent bacterial infections.","definition_xrefs":["Orphanet:2690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"neutropenia-monocytopenia-deafness syndrome","secondary_identifiers":["GARD:3982","MEDGEN:1383523","UMLS:C4518430"],"termid":"MONDO:0017100","xrefs":{"Monarch":{"xref_id":"0017100"}}}


id: MONDO:0021009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the salivary glands. It is the most common primary carcinoma of the salivary glands and usually presents as a firm and painless mass. It is characterized by the presence of epidermoid cells, mucus producing cells, and cells of intermediate type. The majority of cases have a favorable outcome.","definition_xrefs":["NCIT:C5908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"},{"relation_name":"is_a","term_name":"oral cavity mucoepidermoid carcinoma","termid":"MONDO:0044964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"salivary gland mucoepidermoid carcinoma","secondary_identifiers":["UMLS:C1335903","MEDGEN:277630","SCTID:423708008","DOID:0081293"],"synonyms":[{"name":"mucoepidermoid carcinoma of salivary gland","type":"exact"},{"name":"mucoepidermoid carcinoma of the salivary gland","type":"exact"},{"name":"saliva-secreting gland mucoepidermoid carcinoma","type":"exact"},{"name":"salivary gland mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0021009","xrefs":{"Monarch":{"xref_id":"0021009"}}}


id: GO:0033747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: Reactive Black 5 + hydrogen peroxide = oxidized Reactive Black 5 + 2 H2O, and donor + hydrogen peroxide = oxidized donor + 2 H2O.","definition_xrefs":["EC:1.11.1.16"],"gene_count":0,"genotype_count":0,"name":"obsolete versatile peroxidase activity (obsolete GO:0033747)","synonyms":[{"name":"VP","type":"related"},{"name":"hybrid peroxidase activity","type":"related"},{"name":"polyvalent peroxidase activity","type":"related"},{"name":"reactive-black-5:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"versatile peroxidase activity","type":"exact"}],"termid":"GO:0033747"}


id: GO:2000078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic B cell development.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell development","termid":"GO:2000074"},{"relation_name":"positively_regulates","term_name":"type B pancreatic cell development","termid":"GO:0003323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type B pancreatic cell development","synonyms":[{"name":"positive regulation of pancreatic B cell development","type":"exact"},{"name":"positive regulation of pancreatic beta cell development","type":"exact"}],"termid":"GO:2000078"}


id: GO:0140119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 acetylated at lysine 27.","definition_xrefs":["PMID:25417107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674","GO:0140566"],"is_obsolete":false,"name":"histone H3K27ac reader activity","synonyms":[{"name":"histone H3K27ac modified histone binding","type":"narrow"}],"termid":"GO:0140119"}


id: MONDO:0020012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic or rheumatic disease (obsolete MONDO:0020012)","termid":"MONDO:0020012","xrefs":{"Monarch":{"xref_id":"0020012"}}}


id: GO:0102858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-18:3-phosphatidylcholine + O2 + a reduced electron acceptor = 1-18:3-2-18:3-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-18:3-phosphatidylcholine desaturase activity (obsolete GO:0102858)","termid":"GO:0102858"}


id: GO:0042721
data:
  {"annotated_genes":["SJAG_02398","SJAG_00404","SJAG_01640"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75188,104824,115164],"is_not":false,"summary":null,"term":"GO:0042721"}]},"cv_name":"cellular_component","definition":"A multi-subunit complex embedded in the mitochondrial inner membrane that mediates the inner membrane insertion of multi-transmembrane spanning proteins that contain internal targeting elements. In yeast cells, TIM22 is a 300-kDa complex, consisting of four membrane integral subunits, Tim22, Tim54, Tim18 and Sdh3, and a peripheral chaperone complex consisting of the small TIM proteins, Tim9-Tim10-Tim12.","definition_xrefs":["PMID:12191765","PMID:27554484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_01640":null,"SJAG_02398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"TIM22 mitochondrial import inner membrane insertion complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Tim22 complex","type":"exact"},{"name":"mitochondrial inner membrane protein insertion complex","type":"exact"},{"name":"mitochondrial protein translocase complex","type":"broad"}],"termid":"GO:0042721","terms_by_termid":{"GO:0042721":null}}


id: GO:0016602
data:
  {"annotated_genes":["SJAG_01062","SJAG_04607","SJAG_00698","SJAG_05247"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71782,77498,106159,113839],"is_not":false,"summary":null,"term":"GO:0016602"}]},"cv_name":"cellular_component","definition":"A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; functions as both an activator and a repressor, depending on its interacting cofactors. Typically trimeric consisting of NFYA, NFYB and NFYC subunits. In Saccharomyces, it activates the transcription of genes in response to growth in a nonfermentable carbon source and consists of four known subunits: HAP2, HAP3, HAP4 and HAP5.","definition_xrefs":["PMID:7828851","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00698":null,"SJAG_01062":null,"SJAG_04607":null,"SJAG_05247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"CCAAT-binding factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CBF complex","type":"related"},{"name":"NF-Y transcription factor complex","type":"related"},{"name":"nuclear transcription factor Y complex","type":"related"}],"termid":"GO:0016602","terms_by_termid":{"GO:0016602":null}}


id: FYPO:0004915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the sequence of the telomeric repeating unit is normal (i.e. identical to that found in wild type).","definition_xrefs":["PomBase:mah","PMID:18157152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal telomeric repeat sequence","termid":"FYPO:0004915"}


id: PATO:0001233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the back or upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal to","synonyms":[{"name":"dorsal","type":"exact"},{"name":"posterior_to (human torso)","type":"exact"},{"name":"superior_to (human head)","type":"exact"}],"termid":"PATO:0001233"}


id: PBO:0079931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase","termid":"PBO:0079931"}


id: GO:1990660
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of S100A8 and S100A9 and capable of limiting Mn(2+) and Zn(2+) availability at sites of infection. Also binds Ca(2+). Expressed and released by neutrophils and epithelial cells, it exhibits broad-spectrum antimicrobial activity attributed to its metal-binding properties. Endogenous ligand of toll-like receptor 4 (TLR4) and of the receptor for advanced glycation end products (RAGE) initiating signal transduction through NF-kappa-B pathways.","definition_xrefs":["PMID:25417112","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"calprotectin complex","synonyms":[{"name":"calprotectin heterodimer","type":"narrow"}],"termid":"GO:1990660"}


id: MONDO:0003692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymoma occurring in adults.","definition_xrefs":["NCIT:C7947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesenchymoma","termid":"MONDO:0003633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult malignant mesenchymoma","secondary_identifiers":["MEDGEN:83523","UMLS:C0279548","DOID:5894"],"synonyms":[{"name":"adult malignant mesenchymoma","type":"exact"},{"name":"malignant mesenchymoma","type":"broad"},{"name":"malignant mesenchymoma of adults","type":"exact"}],"termid":"MONDO:0003692","xrefs":{"Monarch":{"xref_id":"0003692"}}}


id: PBO:0113199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the DRG family of GTP-binding proteins; associates with translating ribosomes; interacts with Tma46p, Ygr250cp, Gir2p and Yap1p via two-hybrid; localizes to cytosol and peroxisomes","termid":"PBO:0113199"}


id: PR:P78954
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif45 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.15","synonyms":[{"name":"Spom972h-tif45","type":"exact"},{"name":"eIF-4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4F 25 kDa subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA cap-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78954"}


id: PBO:0071446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 52","termid":"PBO:0071446"}


id: GO:0047670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anhydrotetracycline + H+ + NADPH + O2 = 12-dehydrotetracycline + H2O + NADP+.","definition_xrefs":["EC:1.14.13.38","RHEA:11976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"anhydrotetracycline monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04060","MetaCyc:ANHYDROTETRACYCLINE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"ATC oxygenase activity","type":"related"},{"name":"anhydrotetracycline oxygenase activity","type":"related"},{"name":"anhydrotetracycline,NADPH:oxygen oxidoreductase (6-hydroxylating)","type":"related"}],"termid":"GO:0047670"}


id: GO:0010451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a floral meristem, a population of undifferentiated cells in a plant that gives rise to a flower.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"meristem growth","termid":"GO:0035266"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral meristem growth","termid":"GO:0010451"}


id: GO:0042469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reduction of versicolorin A to sterigmatocystin.","definition_xrefs":["PMID:1339261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"versicolorin reductase activity","termid":"GO:0042469"}


id: GO:0052058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type IV secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via substance secreted by type IV secretion system (obsolete GO:0052058)","termid":"GO:0052058"}


id: PBO:0028443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_double-strand_break_formation_at_mating-type_locus","termid":"PBO:0028443"}


id: MONDO:0030947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration, childhood-onset, with hypotonia, respiratory insufficiency, and brain imaging abnormalities","secondary_identifiers":["GARD:18023","UMLS:C5543020","Orphanet:610573","OMIM:619173","MEDGEN:1781967"],"synonyms":[{"name":"CONRIBA","type":"exact"},{"name":"neurodegeneration, childhood-onset, hypotonia, respiratory insufficiency and brain imaging abnormalities","type":"exact"}],"termid":"MONDO:0030947","xrefs":{"Monarch":{"xref_id":"0030947"}}}


id: PBO:0041935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 3","termid":"PBO:0041935"}


id: GO:0090655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a junction formed at the point where double-stranded telomeric DNA becomes a single-stranded G-rich telomeric DNA 3' overhang.","definition_xrefs":["GOC:nc","PMID:21852327","GOC:BHF","GOC:BHF_telomere","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand/single-strand DNA junction binding","termid":"GO:0000406"},{"relation_name":"is_a","term_name":"telomeric DNA binding","termid":"GO:0042162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"double-stranded/single-stranded junction telomeric DNA binding","termid":"GO:0090655"}


id: MONDO:0000354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete JMP syndrome (obsolete MONDO:0000354)","termid":"MONDO:0000354","xrefs":{"Monarch":{"xref_id":"0000354"}}}


id: PBO:0081652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 577","termid":"PBO:0081652"}


id: PBO:0001499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome regulatory particle, gankyrin (predicted)","termid":"PBO:0001499"}


id: MONDO:0020704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, neuromuscular disorder characterized by muscle hyperirritability triggered by stretch, percussion or movement. Patients present wave-like, electrically-silent muscle contractions (rippling), muscle mounding, painful muscle stiffness and muscle hypertrophy, usually with elevated serum creatine kinase.","definition_xrefs":["Orphanet:97238"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"caveolinopathy","termid":"MONDO:0016146"},{"relation_name":"is_a","term_name":"rippling muscle disease","termid":"MONDO:0011634"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"inherited rippling muscle disease","secondary_identifiers":["MedDRA:10069417"],"synonyms":[{"name":"RMD","type":"broad"},{"name":"rippling muscle disease","type":"broad"}],"termid":"MONDO:0020704","xrefs":{"Monarch":{"xref_id":"0020704"}}}


id: MONDO:0011829
data:
  {"annotated_genes":["SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88264],"is_not":false,"summary":null,"term":"MONDO:0011829"}]},"cv_name":"mondo","definition":"Any coenzyme Q10 deficiency in which the cause of the disease is a mutation in the COQ2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"coenzyme Q10 deficiency, primary, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:764868","UMLS:C3551954","OMIM:607426","DOID:0070238","GARD:18378"],"synonyms":[{"name":"COQ10D1","type":"related"},{"name":"COQ2 coenzyme Q10 deficiency","type":"exact"},{"name":"CoQ deficiency 1","type":"related"},{"name":"Coq10 deficiency, primary, 1","type":"related"},{"name":"coenzyme Q deficiency 1","type":"related"},{"name":"coenzyme Q10 deficiency caused by mutation in COQ2","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, 1","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, type 1","type":"exact"},{"name":"ubiquinone deficiency 1","type":"related"}],"termid":"MONDO:0011829","terms_by_termid":{"MONDO:0011829":null},"xrefs":{"Monarch":{"xref_id":"0011829"}}}


id: MOD:01653
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride.","definition_xrefs":["DeltaMass:0","Unimod:139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dansyl chloride derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"Dansyl (Dns)","type":"exact"},{"name":"DansylRes","type":"exact"}],"termid":"MOD:01653"}


id: MONDO:0700224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by variants in the PDE6A gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"PDE6A-related retinopathy","synonyms":[{"name":"PDE6A-related retinopathy","type":"exact"}],"termid":"MONDO:0700224","xrefs":{"Monarch":{"xref_id":"0700224"}}}


id: GO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAP kinase activity","termid":"GO:0043407"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"},{"relation_name":"is_a","term_name":"negative regulation of JNK cascade","termid":"GO:0046329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of JUN kinase activity","synonyms":[{"name":"down regulation of JNK activity","type":"exact"},{"name":"down-regulation of JNK activity","type":"exact"},{"name":"downregulation of JNK activity","type":"exact"},{"name":"inhibition of JNK activity","type":"narrow"},{"name":"negative regulation of JUNK activity","type":"exact"}],"termid":"GO:0043508"}


id: GO:1905273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proton-transporting ATP synthase activity, rotational mechanism.","definition_xrefs":["GO_REF:0000059","PMID:21106936","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ligase activity","termid":"GO:0051351"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"activation of H+-transporting ATP synthase activity","type":"narrow"},{"name":"activation of hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"activation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"narrow"},{"name":"activation of hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"activation of proton-transporting ATP synthase activity, rotational mechanism","type":"narrow"},{"name":"positive regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"positive regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"positive regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"positive regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"up regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"up regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"up regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"up regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"up regulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"up-regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"up-regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"up-regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"up-regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"up-regulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"upregulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"upregulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"upregulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"upregulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"upregulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"}],"termid":"GO:1905273"}


id: GO:0044183
data:
  {"annotated_genes":["SJAG_02570","SJAG_01652","SJAG_02014","SJAG_00954","SJAG_02461","SJAG_03570","SJAG_02926","SJAG_00564","SJAG_03320","SJAG_03930","SJAG_01615","SJAG_04602","SJAG_01664","SJAG_04055","SJAG_02378","SJAG_04511","SJAG_03815","SJAG_04121","SJAG_01186","SJAG_01684","SJAG_02875","SJAG_04684","SJAG_05191","SJAG_04290","SJAG_00770","SJAG_00750","SJAG_02919","SJAG_04567","SJAG_05414","SJAG_03463","SJAG_00790","SJAG_03237","SJAG_02270","SJAG_01510","SJAG_03099","SJAG_04228","SJAG_00353","SJAG_01874","SJAG_04074","SJAG_00447","SJAG_04899","SJAG_04844","SJAG_01002","SJAG_04197","SJAG_00609"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69284,69760,72018,91125,94789,96901,97912,98721,98972,101364,102461,103000,104348,106252,108172,110342,110571,111965,111966,112356,116828,117722,118319,118530,118776,119632],"is_not":false,"summary":null,"term":"GO:0044183"},{"annotations":[62017,68389,66455,58321,59542,65618,63017,56979,60736,57908,67698,68235,69094,65362,70646,60278,60615,66126,71378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140662"}]},"cv_name":"molecular_function","definition":"Binding to a protein or a protein-containing complex to assist the protein folding process.","definition_xrefs":["GOC:mtg_cambridge_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00353":null,"SJAG_00447":null,"SJAG_00564":null,"SJAG_00609":null,"SJAG_00750":null,"SJAG_00770":null,"SJAG_00790":null,"SJAG_00954":null,"SJAG_01002":null,"SJAG_01186":null,"SJAG_01510":null,"SJAG_01615":null,"SJAG_01652":null,"SJAG_01664":null,"SJAG_01684":null,"SJAG_01874":null,"SJAG_02014":null,"SJAG_02270":null,"SJAG_02378":null,"SJAG_02461":null,"SJAG_02570":null,"SJAG_02875":null,"SJAG_02919":null,"SJAG_02926":null,"SJAG_03099":null,"SJAG_03237":null,"SJAG_03320":null,"SJAG_03463":null,"SJAG_03570":null,"SJAG_03815":null,"SJAG_03930":null,"SJAG_04055":null,"SJAG_04074":null,"SJAG_04121":null,"SJAG_04197":null,"SJAG_04228":null,"SJAG_04290":null,"SJAG_04511":null,"SJAG_04567":null,"SJAG_04602":null,"SJAG_04684":null,"SJAG_04844":null,"SJAG_04899":null,"SJAG_05191":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein folding chaperone","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9855212","Reactome:R-HSA-9018785","Reactome:R-HSA-9866253","Reactome:R-HSA-9865893"],"synonyms":[{"name":"chaperone activity","type":"broad"},{"name":"protein binding involved in protein folding","type":"exact"}],"termid":"GO:0044183","terms_by_termid":{"GO:0044183":null,"GO:0140662":null}}


id: PBO:0041992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 38","termid":"PBO:0041992"}


id: PBO:0068329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF32 divergent transcript","termid":"PBO:0068329"}


id: GO:2000837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of androstenedione secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"androstenedione secretion","termid":"GO:0035941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of androstenedione secretion","synonyms":[{"name":"regulation of androst-4-ene-3,17-dione secretion","type":"exact"}],"termid":"GO:2000837"}


id: PBO:0067095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 132, pseudogene","termid":"PBO:0067095"}


id: PBO:0057327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520b","termid":"PBO:0057327"}


id: GO:0035001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of epithelial tubes that originate from pits in an open tracheal system and grow towards each other to meet and form a continuous open tube called the dorsal trunk. The dorsal trunk extends from the anterior spiracle to the posterior spiracle of the larva and forms the main airway of the insect tracheal system.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal trunk growth, open tracheal system","synonyms":[{"name":"dorsal trunk growth","type":"related"}],"termid":"GO:0035001"}


id: PBO:0109221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 2","termid":"PBO:0109221"}


id: GO:1904332
data:
  {"annotated_genes":["SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113721],"is_not":false,"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of error-prone translesion synthesis.","definition_xrefs":["PMID:22761594","GO_REF:0000058","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of error-prone translesion synthesis","termid":"GO:1904331"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"error-prone translesion synthesis","termid":"GO:0042276"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of error-prone translesion synthesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of error-prone postreplication DNA repair","type":"related"},{"name":"down regulation of error-prone translesion synthesis","type":"exact"},{"name":"down regulation of mutagenic PRR","type":"exact"},{"name":"down regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"down-regulation of error-prone postreplication DNA repair","type":"related"},{"name":"down-regulation of error-prone translesion synthesis","type":"exact"},{"name":"down-regulation of mutagenic PRR","type":"exact"},{"name":"down-regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"downregulation of error-prone postreplication DNA repair","type":"related"},{"name":"downregulation of error-prone translesion synthesis","type":"exact"},{"name":"downregulation of mutagenic PRR","type":"exact"},{"name":"downregulation of mutagenic postreplication DNA repair","type":"related"},{"name":"inhibition of error-prone postreplication DNA repair","type":"related"},{"name":"inhibition of error-prone translesion synthesis","type":"narrow"},{"name":"inhibition of mutagenic PRR","type":"narrow"},{"name":"inhibition of mutagenic postreplication DNA repair","type":"related"},{"name":"negative regulation of error-prone postreplication DNA repair","type":"related"},{"name":"negative regulation of mutagenic PRR","type":"exact"},{"name":"negative regulation of mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:1904332","terms_by_termid":{"GO:1904332":null}}


id: MONDO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperpigmentation, familial progressive (obsolete MONDO:0000131)","termid":"MONDO:0000131","xrefs":{"Monarch":{"xref_id":"0000131"}}}


id: MONDO:0017055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycophenolate mofetil (MMF) embryopathy is a malformative syndrome due to the teratogenic effect of MMF, an effective immunosuppressive agent widely used for the prevention of organ rejection after organ transplantation.","definition_xrefs":["Orphanet:268249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycophenolate mofetil embryopathy","secondary_identifiers":["GARD:20946","MEDGEN:1387699","SCTID:723406000","UMLS:C4509879","icd11.foundation:2111105927"],"synonyms":[{"name":"MMF embryopathy","type":"exact"}],"termid":"MONDO:0017055","xrefs":{"Monarch":{"xref_id":"0017055"}}}


id: PBO:0076764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 1","termid":"PBO:0076764"}


id: MONDO:0020173
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the skin of eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palpebral epidermal tumor","termid":"MONDO:0020172"},{"relation_name":"is_a","term_name":"benign eyelid neoplasm","termid":"MONDO:0021605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"benign tumor of palpebral epidermis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:98582"],"synonyms":[{"name":"skin of eyelid benign neoplasm","type":"exact"}],"termid":"MONDO:0020173","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0020173"}}}


id: PBO:0055262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2689","termid":"PBO:0055262"}


id: GO:0008330
data:
  {"annotated_genes":["SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72816],"is_not":false,"summary":null,"term":"GO:0008330"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0004721","GO:0016788","GO:0016787","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein tyrosine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0008330","terms_by_termid":{"GO:0008330":null}}


id: PBO:0088987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane anchored ubiquitin C-terminal hydrolase Ubp11","termid":"PBO:0088987"}


id: FYPO:0008167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to trolox. Cells stop growing (and may die) at a concentration of trolox that allows wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitivite to trolox","termid":"FYPO:0008167"}


id: PBO:0071810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 5","termid":"PBO:0071810"}


id: GO:0047312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + L-phenylalanine = phenylpyruvate + L-alanine.","definition_xrefs":["RHEA:13053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-amino-acid transaminase activity","termid":"GO:0008793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-phenylalanine-pyruvate transaminase activity","secondary_identifiers":["KEGG_REACTION:R00692","MetaCyc:2.6.1.58-RXN","Reactome:R-HSA-893593"],"synonyms":[{"name":"L-histidine:pyruvate aminotransferase activity","type":"related"},{"name":"L-phenylalanine(L-histidine):pyruvate aminotransferase activity","type":"broad"},{"name":"L-phenylalanine:pyruvate aminotransferase activity","type":"exact"},{"name":"L-phenylalanine:pyruvate transaminase activity","type":"exact"},{"name":"histidine aminotransferase activity","type":"related"},{"name":"histidine:pyruvate aminotransferase activity","type":"related"},{"name":"phenylalanine (histidine) aminotransferase activity","type":"broad"},{"name":"phenylalanine(histidine) aminotransferase activity","type":"broad"},{"name":"phenylalanine(histidine) transaminase activity","type":"broad"},{"name":"phenylalanine(histidine):pyruvate aminotransferase activity","type":"broad"}],"termid":"GO:0047312"}


id: FYECO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which stearic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ stearic acid","termid":"FYECO:0000047"}


id: GO:0051546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a keratinocyte, epidermal cells which synthesize keratin, from one site to another.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratinocyte migration","termid":"GO:0051546"}


id: MONDO:0013583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occipital pachygyria and polymicrogyria","secondary_identifiers":["Orphanet:280640","OMIM:614115","UMLS:C3279875","GARD:17299","MEDGEN:481505"],"synonyms":[{"name":"OCCM","type":"related"},{"name":"cortical malformations, occipital","type":"related"},{"name":"occipital MCD","type":"exact"},{"name":"occipital malformations of cortical development","type":"exact"}],"termid":"MONDO:0013583","xrefs":{"Monarch":{"xref_id":"0013583"}}}


id: SO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in no overhangs.","definition_xrefs":["SO:ke","SBOL:jgquinn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_recognition_site","termid":"SO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blunt_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"blunt end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001691"}


id: PBO:0091750
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1960392_1960393insG","termid":"PBO:0091750"}


id: GO:1900526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylserine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8056324","GOC:dgf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900526)","synonyms":[{"name":"negative regulation of phosphatidylserine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900526"}


id: GO:2000781
data:
  {"annotated_genes":["SJAG_02104","SJAG_04457","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95728,112135],"is_not":false,"summary":null,"term":"GO:2000781"},{"annotations":[109340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of double-strand break repair.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"positively_regulates","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_02104":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"positive regulation of double-strand break repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000781","terms_by_termid":{"GO:2000781":null,"GO:2001034":null}}


id: PBO:0050535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietic prostaglandin D synthase","termid":"PBO:0050535"}


id: PBO:0050478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A6","termid":"PBO:0050478"}


id: PBO:0031697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_nuclear_fusion_during_mating","termid":"PBO:0031697"}


id: MONDO:0003777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the renal pelvis that involves the transitional epithelium projecting above the surrounding epithelial surface and consisting of villous or arborescent outgrowths of fibrovascular stroma.","definition_xrefs":["NCIT:C4528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal pelvis papillary tumor","termid":"MONDO:0003717"},{"relation_name":"is_a","term_name":"urothelial papilloma","termid":"MONDO:0004041"},{"relation_name":"is_a","term_name":"benign neoplasm of renal pelvis","termid":"MONDO:0021467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal pelvis urothelial papilloma","secondary_identifiers":["DOID:6119","MEDGEN:271479","UMLS:C1514844"],"synonyms":[{"name":"renal pelvis urothelial papilloma","type":"exact"}],"termid":"MONDO:0003777","xrefs":{"Monarch":{"xref_id":"0003777"}}}


id: PBO:0087446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit I of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; one of three mitochondrially-encoded subunits; number of introns in different strains varies from 2 to 8, with most strains having 4-6 introns","termid":"PBO:0087446"}


id: MONDO:0019964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thymic endocrine tumor is a rare, malignant, primary thymic neoplasm originating from neuroendocrine cells, presenting as a mass within the anterior mediastinum. Patients typically present with nonspecific symptoms, such as chest pain, cough, shortness of breath, or in some cases, superior vena cava syndrome, although patients could be asymptomatic during the early stages or present with multiple endocrine neoplasia type I. Ectopic production of ACTH and serotonin can lead to Cushing syndrome and carcinoid sydrome, respectively.","definition_xrefs":["Orphanet:97289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymus neoplasm","termid":"MONDO:0005197"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thymic neuroendocrine tumor","secondary_identifiers":["ONCOTREE:TNET","NCIT:C6430","GARD:19361"],"synonyms":[{"name":"neuroendocrine neoplasm of thymus","type":"exact"},{"name":"thymus NET","type":"exact"},{"name":"thymus neuroendocrine neoplasm","type":"exact"},{"name":"thymus neuroendocrine tumor","type":"exact"},{"name":"thymus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"thymus neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0019964","xrefs":{"Monarch":{"xref_id":"0019964"}}}


id: GO:0102612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9beta-pimara-7,15-diene + NADPH + O2 + H+ = 6beta-hydroxy-syn-pimaradiene + NADP + H2O.","definition_xrefs":["GOC:pz","PMID:22215681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"syn-pimaradiene 6beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-15452"],"termid":"GO:0102612"}


id: MONDO:0032607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral anomalies and variable endocrine and T-cell dysfunction","secondary_identifiers":["MEDGEN:1648299","UMLS:C4748741","DOID:0070345","OMIM:618223"],"synonyms":[{"name":"VERTEBRAL ANOMALIES AND VARIABLE ENDOCRINE AND T-CELL DYSFUNCTION","type":"related"},{"name":"VETD","type":"related"}],"termid":"MONDO:0032607","xrefs":{"Monarch":{"xref_id":"0032607"}}}


id: PBO:0087294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single stranded DNA-binding protein found at TG1-3 telomere G-tails; key roles in regulation of telomerase, telomere end protection, conventional telomere replication; regulates telomere replication through recruitment of specific sub-complexes, essential function is telomere capping; forms homodimer via N-terminus; disruption of dimerization leads to short telomeres; autophagy and proteasome are involved in Cdc13p degradation; differentially phosphorylated through cell cycle","termid":"PBO:0087294"}


id: PBO:0050862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 1","termid":"PBO:0050862"}


id: PBO:0042377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD207 molecule","termid":"PBO:0042377"}


id: GO:0042683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a compound eye cone cell.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of compound eye cone cell fate specification","termid":"GO:0042682"},{"relation_name":"negatively_regulates","term_name":"compound eye cone cell fate specification","termid":"GO:0042679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye cone cell fate specification","secondary_identifiers":["GO:0010000"],"synonyms":[{"name":"down regulation of cone cell fate specification","type":"broad"},{"name":"down-regulation of cone cell fate specification","type":"broad"},{"name":"downregulation of cone cell fate specification","type":"broad"},{"name":"inhibition of cone cell fate specification","type":"broad"},{"name":"suppression of cone cell fate","type":"broad"}],"termid":"GO:0042683"}


id: PATO:0001516
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An optical quality where light rays originating from a point on the object converge.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Focus_(optics)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus","termid":"PATO:0001516"}


id: MONDO:0015670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cardiomyopathy (obsolete MONDO:0015670)","termid":"MONDO:0015670","xrefs":{"Monarch":{"xref_id":"0015670"}}}


id: GO:0016356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete organophosphorus susceptibility/resistance (obsolete GO:0016356)","synonyms":[{"name":"organophosphorus susceptibility/resistance","type":"exact"}],"termid":"GO:0016356"}


id: MONDO:0010191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 3 von Willebrand disease (type 3 VWD) is the most severe form of VWD characterized by a bleeding disorder associated with a total or near-total absence of Willebrand factor (von Willebrand factor; VWF) in the plasma and cellular compartments, also leading to a profound deficiency of plasmatic factor VIII (FVIII).","definition_xrefs":["Orphanet:166096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary von Willebrand disease","termid":"MONDO:0019565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease 3","secondary_identifiers":["OMIM:277480","DOID:0111054","UMLS:C1264041","GARD:17025","SCTID:128108002","MESH:D056729","NCIT:C85213","MEDGEN:266075"],"synonyms":[{"name":"VON WILLEBRAND disease, type 3","type":"related"},{"name":"VWD type 3","type":"exact"},{"name":"VWD, type 3","type":"related"},{"name":"VWD3","type":"exact"},{"name":"Von Willebrand disease, type 3","type":"related"},{"name":"von Willebrand disease 3","type":"exact"},{"name":"von Willebrand disease type 3","type":"exact"},{"name":"von Willebrand disease type III","type":"exact"},{"name":"von Willebrand's disease 3","type":"exact"},{"name":"von Willebrand's disease type 3","type":"exact"}],"termid":"MONDO:0010191","xrefs":{"Monarch":{"xref_id":"0010191"}}}


id: MONDO:0100128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The simultaneous infection of a host by multiple pathogen species.","definition_xrefs":["EFO:0010716","Wikipedia:Coinfection","OMIT:0027719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coinfection","secondary_identifiers":["MEDGEN:452372","UMLS:C0275524","MESH:D060085"],"termid":"MONDO:0100128","xrefs":{"Monarch":{"xref_id":"0100128"}}}


id: GO:0033238
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170066"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of amine metabolism","type":"exact"},{"name":"regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033238","terms_by_termid":{"GO:0170066":null}}


id: GO:0005070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively and non-covalently and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68).","definition_xrefs":["GOC:mah","GOC:so"],"gene_count":0,"genotype_count":0,"name":"obsolete SH3/SH2 adaptor activity (obsolete GO:0005070)","synonyms":[{"name":"SH3/SH2 adaptor protein activity","type":"narrow"}],"termid":"GO:0005070"}


id: GO:0070498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-1 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-1","termid":"GO:0071347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-1-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9020702"],"synonyms":[{"name":"IL-1 alpha-mediated signaling pathway","type":"narrow"},{"name":"IL-1 beta-mediated signaling pathway","type":"narrow"},{"name":"IL-1-mediated signaling pathway","type":"exact"},{"name":"interleukin-1 alpha-mediated signaling pathway","type":"narrow"},{"name":"interleukin-1 beta-mediated signaling pathway","type":"narrow"},{"name":"interleukin-1-mediated signalling pathway","type":"exact"}],"termid":"GO:0070498"}


id: FYECO:0000285
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were cold shocked followed by recovery at a temperature range normal for standard pombe growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock and recovery at normal temperature","termid":"FYECO:0000285"}


id: PBO:0004816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein Arp10 (predicted)","termid":"PBO:0004816"}


id: MONDO:0044786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low-grade malignant neoplasm that arises from the exocrine pancreas. It is characterized by the presence of uniform cells that form solid and pseudopapillary patterns, cystic changes, and hemorrhage. Perineural invasion, vascular invasion, and invasion into surrounding tissues may be present. It usually presents as an encapsulated, solitary, and lobulated pancreatic mass. It is usually found incidentally during physical examination or it may present with abdominal discomfort and pain. It occurs predominantly in young women. Complete removal of the tumor is curative in the majority of cases.","definition_xrefs":["NCIT:C37212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant exocrine pancreas neoplasm","termid":"MONDO:0002116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"solid pseudopapillary neoplasm of the pancreas","secondary_identifiers":["ONCOTREE:SPN","UMLS:C1336030","MEDGEN:234800"],"synonyms":[{"name":"Frantz tumor","type":"exact"},{"name":"Frantz tumour","type":"exact"},{"name":"solid pseudopapillary neoplasm of the pancreas","type":"exact"},{"name":"solid pseudopapillary tumor of the pancreas","type":"exact"},{"name":"solid pseudopapillary tumour of the pancreas","type":"exact"}],"termid":"MONDO:0044786","xrefs":{"Monarch":{"xref_id":"0044786"}}}


id: PBO:0073406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 9","termid":"PBO:0073406"}


id: PBO:0082802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of the arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1 70K protein; protein abundance increases in response to DNA replication stress","termid":"PBO:0082802"}


id: PR:P05733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3702 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.05c","synonyms":[{"name":"L37-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3702","type":"exact"},{"name":"YL27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05733"}


id: PBO:0062920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidinergic receptor P2Y6","termid":"PBO:0062920"}


id: GO:0160161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of propanediol catabolic process.","definition_xrefs":["PMID:9023178","PMID:7559322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alcohol catabolic process","termid":"GO:1900421"},{"relation_name":"positively_regulates","term_name":"propanediol catabolic process","termid":"GO:0051144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of propanediol catabolic process","termid":"GO:0160161"}


id: PBO:0060293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6 pseudogene 1","termid":"PBO:0060293"}


id: PBO:0045730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E4F transcription factor 1","termid":"PBO:0045730"}


id: PBO:0044895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPP autophagy regulator 1","termid":"PBO:0044895"}


id: PBO:0044476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 19 subfamily A member 1","termid":"PBO:0044476"}


id: PBO:0046972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 85 member A","termid":"PBO:0046972"}


id: PBO:0089346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim8-Tim13 mitochondrial intermembrane space protein transporter complex subunit Tim13","termid":"PBO:0089346"}


id: MONDO:0012005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth failure, microcephaly, intellectual disability, cataracts, large joint contractures, osteoporosis, cortical dysplasia, and cerebellar atrophy","secondary_identifiers":["MEDGEN:330820","MESH:C564264","OMIM:608278","UMLS:C1842321"],"synonyms":[{"name":"growth failure, microcephaly, intellectual disability, cataracts, large joint contractures, osteoporosis, cortical dysplasia, and cerebellar atrophy","type":"exact"},{"name":"growth failure, microcephaly, mental retardation, cataracts, large joint contractures, osteoporosis, cortical dysplasia, and cerebellar atrophy","type":"exact"}],"termid":"MONDO:0012005","xrefs":{"Monarch":{"xref_id":"0012005"}}}


id: GO:0060388
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A glycoprotein-based structure that lies outside the plasma membrane and surrounds the egg before fertilization.","definition_xrefs":["ISBN:0878932437","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"egg coat","termid":"GO:0035805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vitelline envelope","synonyms":[{"name":"fertilization membrane","type":"related"}],"termid":"GO:0060388"}


id: PBO:0063023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 3","termid":"PBO:0063023"}


id: PATO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's absence or closure of a normal body orifice or tubular passage.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closed","termid":"PATO:0000608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atretic","synonyms":[{"name":"atresia","type":"exact"}],"termid":"PATO:0001819"}


id: PBO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Nop12 (predicted)","termid":"PBO:0002087"}


id: MONDO:0013041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical hemolytic uremic syndrome with complement gene abnormality","termid":"MONDO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with I factor anomaly","secondary_identifiers":["OMIM:612923","Orphanet:93580","UMLS:C2752039","GARD:18553","MEDGEN:414542"],"synonyms":[{"name":"AHUS3","type":"related"},{"name":"D-HUS with I factor anomaly","type":"exact"},{"name":"aHUS with I factor anomaly","type":"exact"},{"name":"aHUS, susceptibility to, 3","type":"related"},{"name":"aHUS3","type":"related"},{"name":"atypical HUS with I factor anomaly","type":"exact"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, 3","type":"related"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, type 3","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with I factor anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with I factor anomaly","type":"exact"},{"name":"susceptibility to atypical hemolytic uremic syndrome 3","type":"related"}],"termid":"MONDO:0013041","xrefs":{"Monarch":{"xref_id":"0013041"}}}


id: GO:0016521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of pituitary adenylate cyclase activating polypeptide, a peptide produced in the hypothalamus that binds to receptors to exert pleiotropic effects including control of neurotransmitter release, vasodilation, bronchodilation, activation of intestinal motility, increase in insulin and histamine secretion, immune modulation, and stimulation of cell proliferation and differentiation.","definition_xrefs":["GOC:mah","PMID:19805477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0005515","GO:0005488","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"pituitary adenylate cyclase activating polypeptide activity","synonyms":[{"name":"pituitary adenylyl cyclase activating polypeptide activity","type":"exact"}],"termid":"GO:0016521"}


id: GO:0071393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to progesterone","termid":"GO:0032570"},{"relation_name":"is_a","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to progesterone stimulus","termid":"GO:0071393"}


id: MONDO:0008448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spheroid body myopathy (obsolete MONDO:0008448)","termid":"MONDO:0008448","xrefs":{"Monarch":{"xref_id":"0008448"}}}


id: GO:0052161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of host processes resulting in the thickening of its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of defense-related host cell wall thickening (obsolete GO:0052161)","synonyms":[{"name":"modulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of host defensive cell wall thickening","type":"related"}],"termid":"GO:0052161"}


id: GO:0047584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-4-oxobutane-1,2,4-tricarboxylate = (1E)-4-oxobut-1-ene-1,2,4-tricarboxylate + H2O.","definition_xrefs":["RHEA:17401","EC:4.2.1.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"4-oxalmesaconate hydratase activity","secondary_identifiers":["KEGG_REACTION:R04478","MetaCyc:RXN-2463"],"synonyms":[{"name":"2-hydroxy-4-oxobutane-1,2,4-tricarboxylate 2,3-hydro-lyase [(E)-4-oxobut-1-ene-1,2,4-tricarboxylate-forming]","type":"related"},{"name":"2-hydroxy-4-oxobutane-1,2,4-tricarboxylate 2,3-hydro-lyase activity","type":"related"},{"name":"4-carboxy-2-oxobutane-1,2,4-tricarboxylate 2,3-hydro-lyase activity","type":"related"},{"name":"4-carboxy-2-oxohexenedioate hydratase activity","type":"related"},{"name":"gamma-oxalmesaconate hydratase activity","type":"related"},{"name":"oxalmesaconate hydratase activity","type":"related"}],"termid":"GO:0047584"}


id: MONDO:0032781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypotonia, epilepsy, developmental delay, and digital anomalies","secondary_identifiers":["MEDGEN:1674629","OMIM:618494","UMLS:C5193125"],"synonyms":[{"name":"CHEDDA","type":"related"},{"name":"CONGENITAL HYPOTONIA, EPILEPSY, DEVELOPMENTAL DELAY, AND DIGITAL ANOMALIES","type":"related"}],"termid":"MONDO:0032781","xrefs":{"Monarch":{"xref_id":"0032781"}}}


id: PBO:0071106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 108","termid":"PBO:0071106"}


id: PR:P40370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eno101 gene.","definition_xrefs":["UniProtKB:P40370","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1815.01","synonyms":[{"name":"2-phospho-D-glycerate hydro-lyase 1-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-phosphoglycerate dehydratase 1-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eno101","type":"exact"}],"termid":"PR:P40370"}


id: MONDO:0016656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 7","termid":"MONDO:0016906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7q31 microdeletion syndrome","secondary_identifiers":["GARD:20692","MEDGEN:1664416","Orphanet:251061","UMLS:C4750783"],"synonyms":[{"name":"Del(7)(q31)","type":"exact"},{"name":"monosomy 7q31","type":"exact"}],"termid":"MONDO:0016656","xrefs":{"Monarch":{"xref_id":"0016656"}}}


id: GO:1902743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lamellipodium organization.","definition_xrefs":["GO_REF:0000058","PMID:16054028","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"lamellipodium organization","termid":"GO:0097581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lamellipodium organization","termid":"GO:1902743"}


id: PBO:0047074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member C, pseudogene","termid":"PBO:0047074"}


id: MONDO:0018634
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971004"}]},"cv_name":"mondo","definition":"Hereditary amyloidosis refers to a group of inherited conditions that make up one of the subtypes of amyloidosis. Hereditary amyloidosisis characterized by the deposit of an abnormal protein called amyloid in multiple organs of the body where it should not be, which causes disruption of organ tissue structure and function. In hereditary amyloidosis, amyloid deposits most often occur in tissues of the heart, kidneys, and nervous system. While symptoms of hereditary amyloidosis may appear in childhood, most individuals do not experience symptoms until adulthood. There are many types of hereditary amyloidosis associated with different gene mutations and abnormal proteins. The most common type of hereditary amyloidosis is transthyretin amyloidosis (ATTR),a condition in which the amyloid deposits are most often made up of the transthyretin protein which is made in the liver. Other examplesof hereditary amyloidosis include, but are not limited to, apolipoprotein AI amyloidosis (A ApoAI), gelsolin amyloidosis (A Gel), lysozyme amyloidosis (A Lys), cystatin C amyloidosis (A Cys), fibrinogen Aα-chain amyloidosis (A Fib), and apolipoprotein AII amyloidosis (A ApoAII). Most types of hereditary amyloidosis are inherited in an autosomal dominant manner. Treatment is focused on addressing symptoms of organ damage and slowing down the production of amyloid when possible through methods such as liver transplants.","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"hereditary amyloidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:444116","MESH:D028226","GARD:6611","icd11.foundation:1152878652","UMLS:C0740340","SCTID:367601000119103","MEDGEN:148146","NCIT:C84555"],"synonyms":[{"name":"amyloidosis hereditary","type":"related"},{"name":"amyloidosis, Familial","type":"exact"},{"name":"familial amyloidosis","type":"related"},{"name":"hereditary amyloidosis (disease)","type":"exact"}],"termid":"MONDO:0018634","terms_by_termid":{"MONDO:0971004":null},"xrefs":{"Monarch":{"xref_id":"0018634"}}}


id: PBO:0090174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GEF, implicated in endosomal transport","termid":"PBO:0090174"}


id: PBO:0013759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA isopentenyltransferase Tit1","termid":"PBO:0013759"}


id: PBO:0017571
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.96","termid":"PBO:0017571"}


id: PBO:0042550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK13 divergent transcript","termid":"PBO:0042550"}


id: GO:0042161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipoprotein by oxidation of one or more amino acids or the lipid group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein modification","termid":"GO:0042160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein oxidation","termid":"GO:0042161"}


id: PBO:0011083
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, ATP Km 1.9 mM","termid":"PBO:0011083"}


id: GO:0008216
data:
  {"annotated_genes":["SJAG_04130","SJAG_04481","SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72577],"is_not":false,"summary":null,"term":"GO:0008216"},{"annotations":[76756,79625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03632":null,"SJAG_04130":null,"SJAG_04481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"spermidine metabolism","type":"exact"}],"termid":"GO:0008216","terms_by_termid":{"GO:0008216":null,"GO:0008295":null}}


id: GO:0035181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Digging into the substrate by non-feeding larvae in search for food-free sites suitable for pupation.","definition_xrefs":["PMID:12848927","PMID:12848939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval locomotory behavior","termid":"GO:0008345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval burrowing behavior","synonyms":[{"name":"larval burrowing behaviour","type":"exact"}],"termid":"GO:0035181"}


id: GO:0009862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by salicylic acid involved in systemic acquired resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"},{"relation_name":"part_of","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"systemic acquired resistance, salicylic acid mediated signaling pathway","synonyms":[{"name":"salicylic acid mediated signaling pathway (systemic acquired resistance)","type":"exact"},{"name":"systemic acquired resistance, salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0009862"}


id: MONDO:0018044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic hypersomnia is a sleep disorder classified in two forms: idiopathic hypersomnia with long sleep time and idiopathic hypersomnia without long sleep time.","definition_xrefs":["Orphanet:33208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersomnia","termid":"MONDO:0005466"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hypersomnia","secondary_identifiers":["icd11.foundation:631826564","GARD:8737","MEDGEN:155626","MESH:D020177","UMLS:C0751757","NCIT:C116343","SCTID:3731000119107"],"synonyms":[{"name":"idiopathic hypersomnolence","type":"related"},{"name":"primary hypersomnia","type":"exact"}],"termid":"MONDO:0018044","xrefs":{"Monarch":{"xref_id":"0018044"}}}


id: MONDO:0020157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic palpebral coloboma (obsolete MONDO:0020157)","secondary_identifiers":["Orphanet:98566"],"termid":"MONDO:0020157","xrefs":{"Monarch":{"xref_id":"0020157"}}}


id: PBO:0072933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 13","termid":"PBO:0072933"}


id: PBO:0054260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1645","termid":"PBO:0054260"}


id: GO:0002904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte apoptotic process","termid":"GO:0070230"},{"relation_name":"positively_regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell apoptotic process","synonyms":[{"name":"activation of B cell apoptosis","type":"narrow"},{"name":"positive regulation of B cell apoptosis","type":"narrow"},{"name":"stimulation of B cell apoptosis","type":"narrow"},{"name":"up regulation of B cell apoptosis","type":"exact"},{"name":"up-regulation of B cell apoptosis","type":"exact"},{"name":"upregulation of B cell apoptosis","type":"exact"}],"termid":"GO:0002904"}


id: GO:0051420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to nebulette, a 107 kDa protein associated with the I-Z-I complex of cardiac myofibrils. It shows a high degree of homology with skeletal muscle nebulin.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete nebulette binding (obsolete GO:0051420)","synonyms":[{"name":"nebulette binding","type":"exact"}],"termid":"GO:0051420"}


id: PBO:0109352
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(16)","termid":"PBO:0109352"}


id: FYPO:0007868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a substance that inhibits actin polymerization. Cells stop growing (and may die) at a concentration of an actin polymerization inhibitor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to actin polymerization inhibitor","synonyms":[{"name":"sensitive to actin cytoskeleton damaging agent","type":"related"},{"name":"sensitive to actin polymerisation inhibitor","type":"exact"}],"termid":"FYPO:0007868"}


id: PBO:0059034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 23B","termid":"PBO:0059034"}


id: PBO:0069967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1262, pseudogene","termid":"PBO:0069967"}


id: GO:0019640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-glucuronate into D-xylulose 5-phosphate.","definition_xrefs":["GOC:go_curators","PMID:27189775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucuronate catabolic process","termid":"GO:0042840"},{"relation_name":"is_a","term_name":"D-xylulose 5-phosphate metabolic process","termid":"GO:0051167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-glucuronate catabolic process to D-xylulose 5-phosphate","secondary_identifiers":["Reactome:R-HSA-5661270"],"synonyms":[{"name":"glucuronate breakdown to xylulose 5-phosphate","type":"exact"},{"name":"glucuronate catabolic process to xylulose 5-phosphate","type":"exact"},{"name":"glucuronate degradation to xylulose 5-phosphate","type":"exact"}],"termid":"GO:0019640"}


id: GO:0036001
data:
  {"annotated_genes":["SJAG_00691"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94660],"is_not":false,"summary":null,"term":"GO:0036001"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxal 5'-phosphate, the active form of vitamin B6, from simpler components.","definition_xrefs":["GOC:yaf","GOC:bf","MetaCyc:PYRIDOXSYN-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal phosphate biosynthetic process","termid":"GO:0042823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00691":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"'de novo' pyridoxal 5'-phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"'de novo' PLP biosynthesis","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate anabolism","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate biosynthesis","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate formation","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate synthesis","type":"exact"},{"name":"'de novo' pyridoxal phosphate biosynthetic process","type":"broad"}],"termid":"GO:0036001","terms_by_termid":{"GO:0036001":null}}


id: MONDO:0004804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation and enlargement of the lacrimal gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"disorder of lacrimal gland","termid":"MONDO:0024625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dacryoadenitis","secondary_identifiers":["MEDGEN:102328","ICD9:375.00","DOID:950","MESH:D003607","ICD9:375.0","SCTID:86927009","UMLS:C0155223","NCIT:C26971"],"synonyms":[{"name":"inflammation of lacrimal gland","type":"exact"},{"name":"lacrimal gland inflammation","type":"exact"}],"termid":"MONDO:0004804","xrefs":{"Monarch":{"xref_id":"0004804"}}}


id: GO:0062030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate, frequency or extent of stress-granule assembly, the aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.","definition_xrefs":["PMID:20180778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress granule assembly","termid":"GO:0062028"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"stress granule assembly","termid":"GO:0034063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of stress granule assembly","termid":"GO:0062030"}


id: GO:0150024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an oxidised low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["PMID:27607416","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidised low-density lipoprotein particle clearance","synonyms":[{"name":"ox-LDL particle clearance","type":"exact"},{"name":"oxLDL particle clearance","type":"exact"},{"name":"oxidised LDL particle clearance","type":"exact"},{"name":"oxidized LDL particle clearance","type":"exact"},{"name":"oxidized low-density lipoprotein particle clearance","type":"exact"}],"termid":"GO:0150024"}


id: FYPO:0003900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a triphosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal triphosphatase activity","termid":"FYPO:0003899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased triphosphatase activity","synonyms":[{"name":"reduced triphosphatase activity","type":"exact"}],"termid":"FYPO:0003900"}


id: MONDO:0957211
data:
  {"annotated_genes":["SJAG_01493","SJAG_04246"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88329,88330],"is_not":false,"summary":null,"term":"MONDO:0957211"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01493":null,"SJAG_04246":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration and seizures due to copper transport defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830385","MEDGEN:1841021","OMIM:620306"],"termid":"MONDO:0957211","terms_by_termid":{"MONDO:0957211":null},"xrefs":{"Monarch":{"xref_id":"0957211"}}}


id: GO:0103071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA = formyl-CoA + a 2-methyl branched 2,3,4-saturated fatty aldehyde.","definition_xrefs":["EC:4.1.-.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA lyase activity (obsolete GO:0103071)","termid":"GO:0103071"}


id: PBO:0040180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate beta-hydroxylase domain containing 1","termid":"PBO:0040180"}


id: PATO:0001609
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being scattered; spread irregularly, and at a distance from each other.","definition_xrefs":["biology.lsu:biology.lsu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sparse","termid":"PATO:0001609"}


id: PBO:0116604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer associated lncRNA targeting TOP2A","termid":"PBO:0116604"}


id: PBO:0109204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer kinetochore KNL network protein, KNL-1 family member, blinkin, Spc7","termid":"PBO:0109204"}


id: PR:O13795
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pof8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.17","synonyms":[{"name":"Spom972h-pof8","type":"exact"}],"termid":"PR:O13795"}


id: MONDO:0002805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm arising from the sweat glands. Variants include the clear cell and nodular hidradenoma.","definition_xrefs":["NCIT:C7563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland adenoma","termid":"MONDO:0021110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hidradenoma","secondary_identifiers":["MEDGEN:1851798","SCTID:400099008","DOID:3896","UMLS:C5848251"],"synonyms":[{"name":"acrospiroma","type":"related"},{"name":"eccrine acrospiroma","type":"related"},{"name":"hidradenoma","type":"exact"},{"name":"hidradenoma of skin","type":"exact"},{"name":"sweat gland adenoma","type":"related"},{"name":"syringoadenoma","type":"exact"}],"termid":"MONDO:0002805","xrefs":{"Monarch":{"xref_id":"0002805"}}}


id: SO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome, where the chromosome has undergone a large structural rearrangement that altered the genome organization. There is no longer synteny to the reference genome.","definition_xrefs":["PMID:18564416","NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"is_a","term_name":"structural_alteration","termid":"SO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rearrangement_region","synonyms":[{"name":"rearrangement region","type":"exact"}],"termid":"SO:0001872"}


id: PBO:0065200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF19 pseudogene 1","termid":"PBO:0065200"}


id: MONDO:0017048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudomyxoma peritonei is characterized by disseminated intra-peritoneal mucinous tumors and mucinous ascites in the abdomen and pelvis.","definition_xrefs":["Orphanet:26790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal carcinoma","termid":"MONDO:0002113"},{"relation_name":"is_a","term_name":"mucinous adenocarcinoma of the appendix","termid":"MONDO:0018330"},{"relation_name":"is_a","term_name":"peritoneal carcinomatosis","termid":"MONDO:0700336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pseudomyxoma peritonei","secondary_identifiers":["NORD:1628","SCTID:307601000","UMLS:C0033822","DOID:3559","GARD:7488","MedDRA:10037138","MEDGEN:18726","ICDO:8480/6","MESH:D011553","NCIT:C3345"],"synonyms":[{"name":"Adenomucinosis","type":"exact"},{"name":"Myxoma peritonei","type":"exact"},{"name":"PMP","type":"exact"},{"name":"gelatinous ascites","type":"exact"},{"name":"mucinous ascites","type":"exact"},{"name":"peritoneal cavity pseudomyxoma peritonei","type":"exact"},{"name":"pseudomyxoma peritonei","type":"exact"},{"name":"pseudomyxoma peritonei (morphologic abnormality)","type":"exact"},{"name":"syndrome of pseudomyxoma peritonei","type":"related"},{"name":"well differentiated peritoneal mucinous adenocarcinoma","type":"exact"}],"termid":"MONDO:0017048","xrefs":{"Monarch":{"xref_id":"0017048"}}}


id: GO:0001704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the ectoderm, mesoderm and endoderm during gastrulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of primary germ layer","termid":"GO:0001704"}


id: PBO:0055658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3098","termid":"PBO:0055658"}


id: GO:0140570
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76446],"is_not":false,"summary":null,"term":"GO:0140570"}]},"cv_name":"biological_process","definition":"The removal of a mislocalized protein from the mitochondrial outer membrane.","definition_xrefs":["PMID:32973005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraction of mislocalized protein from membrane","termid":"GO:0140568"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"extraction of mislocalized protein from mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"extraction of mislocalized protein from outer mitochondrion membrane","type":"exact"}],"termid":"GO:0140570","terms_by_termid":{"GO:0140570":null}}


id: GO:0034800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trinitrophenol dihydride Meisenheimer complex (aci form) = 2,4-dinitrophenol hydride Meisenheimer complex + NO2. Trinitrophenol is also known as TNP and dinitrophenol is also known as DNP.","definition_xrefs":["UM-BBD_reactionID:r1067"],"gene_count":0,"genotype_count":0,"name":"obsolete trinitrophenol dihydride denitratase activity (obsolete GO:0034800)","synonyms":[{"name":"2,4,6-trinitrophenol dihydride denitratase activity","type":"exact"},{"name":"TNP dihydride denitratase activity","type":"exact"}],"termid":"GO:0034800"}


id: GO:0009310
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amine breakdown","type":"exact"},{"name":"amine catabolism","type":"exact"},{"name":"amine degradation","type":"exact"}],"termid":"GO:0009310","terms_by_termid":{"GO:0009447":null}}


id: PBO:0078141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 20","termid":"PBO:0078141"}


id: MONDO:0008644
data:
  {"annotated_genes":["SJAG_02317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88944],"is_not":false,"summary":null,"term":"MONDO:0008644"}]},"cv_name":"mondo","definition":"A chromosomal disease that has material basis in deletion polymorphisms at chromosome location 22q11 and is characterized by variable developmental problems and schizoid features.","definition_xrefs":["DOID:12583","PMID:PMID%3A+19243607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"22q11.2 deletion syndrome","termid":"MONDO:0018923"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267","MONDO:0002320"],"is_obsolete":false,"name":"velocardiofacial syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:65085","MESH:D004062","NANDO:1200688","ICD9:758.32","NANDO:1200339","UMLS:C0220704","NANDO:2200712","OMIM:192430","GARD:15123"],"synonyms":[{"name":"22q11 deletion syndrome","type":"exact"},{"name":"Shprintzen VCF syndrome","type":"exact"},{"name":"Shprintzen syndrome","type":"related"},{"name":"VCF syndrome","type":"exact"},{"name":"VCF-velocardiofacial syndrome","type":"exact"},{"name":"chromosome 22Q11.2 deletion syndrome","type":"related"},{"name":"deletion 22q11.2 syndrome","type":"exact"},{"name":"velocardiofacial syndrome","type":"exact"}],"termid":"MONDO:0008644","terms_by_termid":{"MONDO:0008644":null},"xrefs":{"Monarch":{"xref_id":"0008644"}}}


id: FYPO:0003293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UDP-galactose transmembrane transport occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal UDP-galactose transmembrane transport","termid":"FYPO:0003292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased UDP-galactose transmembrane transport","synonyms":[{"name":"increased UDP-galactose transmembrane transport during mitotic cell cycle","type":"related"},{"name":"increased UDP-galactose transmembrane transport during vegetative growth","type":"exact"}],"termid":"FYPO:0003293"}


id: GO:2000370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of clathrin-mediated endocytosis.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor-mediated endocytosis","termid":"GO:0048260"},{"relation_name":"is_a","term_name":"regulation of clathrin-dependent endocytosis","termid":"GO:2000369"},{"relation_name":"positively_regulates","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of clathrin-dependent endocytosis","synonyms":[{"name":"positive regulation of clathrin coated pit-dependent endocytosis","type":"exact"},{"name":"positive regulation of clathrin-mediated endocytosis","type":"exact"}],"termid":"GO:2000370"}


id: GO:1900525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylserine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8056324","GOC:dgf","GOC:TermGenie","PMID:8614637"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900525)","synonyms":[{"name":"activation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900525"}


id: GO:1904261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of basement membrane assembly involved in embryonic body morphogenesis.","definition_xrefs":["GOC:als","GOC:TermGenie","PMID:23940118","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix assembly","termid":"GO:1901203"},{"relation_name":"is_a","term_name":"regulation of basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:1904259"},{"relation_name":"positively_regulates","term_name":"basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:2001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of basement membrane assembly involved in embryonic body morphogenesis","synonyms":[{"name":"activation of basement membrane assembly involved in embryonic body morphogenesis","type":"narrow"},{"name":"up regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"up-regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"upregulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"}],"termid":"GO:1904261"}


id: PBO:0109141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic, EGF-CFC family member 1","termid":"PBO:0109141"}


id: PBO:0110305
data:
  {"annotation_feature_type":"gene","cv_name":"feature_pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_pub_source","termid":"PBO:0110305"}


id: GO:0071628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a fungal-type vacuole membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of fungal-type vacuolar membrane (obsolete GO:0071628)","termid":"GO:0071628"}


id: PBO:0090590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-amylase homolog Aah3","termid":"PBO:0090590"}


id: FYPO:0004828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"},{"relation_name":"is_a","term_name":"normal protein localization during mitosis","termid":"FYPO:0004328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to nucleus during mitosis","synonyms":[{"name":"normal protein localisation to nucleus during mitosis","type":"exact"},{"name":"normal protein localization to nucleus during mitosis during vegetative growth","type":"exact"},{"name":"normal protein localization to nucleus during mitotic M phase","type":"related"},{"name":"normal protein localization to nucleus during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004828"}


id: PATO:0002104
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A compositional quality inhering in an bearer by virtue of the bearer's infiltration by leukocytes, local edema and accumulation of plasma proteins.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory","termid":"PATO:0002104"}


id: PBO:0042655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 4","termid":"PBO:0042655"}


id: GO:0009220
data:
  {"annotated_genes":["SJAG_00694","SJAG_00197","SJAG_02887","SJAG_04713","SJAG_04709","SJAG_00444","SJAG_00964","SJAG_00533","SJAG_04354","SJAG_00779","SJAG_03708","SJAG_03164","SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[61627,59762,59387,62632,57220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[82219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[69582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[65593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[69584,94812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[82218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[94813,93809,69583,90265,89267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[65592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:PWY0-162"],"synonyms":[{"name":"pyrimidine ribonucleotide anabolism","type":"exact"},{"name":"pyrimidine ribonucleotide biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleotide formation","type":"exact"},{"name":"pyrimidine ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009220","terms_by_termid":{"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046705":null}}


id: PBO:0082897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin, interacts with cyclin-dependent kinase Pho85p; member of the Pcl1,2-like subfamily, involved in the regulation of polarized growth and morphogenesis and progression through the cell cycle; is ubiquitinated by Dma1p; phosphorylation by Pho85p targets it for degradation; localizes to sites of polarized cell growth","termid":"PBO:0082897"}


id: MONDO:0020050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal trisomy (obsolete MONDO:0020050)","secondary_identifiers":["ICD9:758.5","Orphanet:98130","SCTID:429442006"],"synonyms":[{"name":"autosomal duplication","type":"exact"},{"name":"chromosomal triplication","type":"related"},{"name":"trisomy","type":"broad"}],"termid":"MONDO:0020050","xrefs":{"Monarch":{"xref_id":"0020050"}}}


id: MONDO:0012884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 13","secondary_identifiers":["MEDGEN:382864","OMIM:612378","UMLS:C2676487"],"synonyms":[{"name":"SLEB13","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 13","type":"exact"}],"termid":"MONDO:0012884","xrefs":{"Monarch":{"xref_id":"0012884"}}}


id: GO:0017072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct, non-covalent assembly of tubulin-containing structures in vivo, but is not a component of the assembled structures when performing its normal biological function.","definition_xrefs":["PMID:11847227","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete tubulin-specific chaperone activity (obsolete GO:0017072)","synonyms":[{"name":"tubulin-specific chaperone activity","type":"exact"}],"termid":"GO:0017072"}


id: GO:2000792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal cell proliferation involved in lung development.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell proliferation","termid":"GO:0002053"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000790"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell proliferation involved in lung development","termid":"GO:0060916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000792"}


id: PATO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light purple","termid":"PATO:0001260"}


id: FYPO:0005764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal in regions containing G-quartet (G4) motifs.","definition_xrefs":["PMID:25471935","PomBase:mah","PMID:27611590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased replication fork pausing","termid":"FYPO:0005763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000293"],"is_obsolete":false,"name":"increased replication fork pausing at G4 motif","synonyms":[{"name":"increased replication fork pausing at G-quadruplex","type":"exact"},{"name":"increased replication fork pausing at G-quartet","type":"exact"},{"name":"increased replication fork pausing at G4 motif during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing at G4 motif during vegetative growth","type":"exact"}],"termid":"FYPO:0005764"}


id: PBO:0064504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit E","termid":"PBO:0064504"}


id: GO:0050262
data:
  {"annotated_genes":["SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115061],"is_not":false,"summary":null,"term":"GO:0050262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-nicotinamide D-riboside + ATP = beta-nicotinamide D-ribonucleotide + ADP + H+.","definition_xrefs":["RHEA:14017","PMID:17914902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"ribosylnicotinamide kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02324","MetaCyc:RIBOSYLNICOTINAMIDE-KINASE-RXN","Reactome:R-HSA-8869633","EC:2.7.1.22","Reactome:R-HSA-8869627","GO:0000816"],"synonyms":[{"name":"ATP:N-ribosylnicotinamide 5'-phosphotransferase activity","type":"related"},{"name":"nicotinamide riboside kinase activity","type":"exact"},{"name":"ribosylnicotinamide kinase (phosphorylating)","type":"related"}],"termid":"GO:0050262","terms_by_termid":{"GO:0050262":null}}


id: GO:0075050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of symbiont cell wall strengthening during entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of symbiont cell wall strengthening involved in entry into host (obsolete GO:0075050)","synonyms":[{"name":"positive regulation of symbiont cell wall strengthening during entry into host","type":"related"}],"termid":"GO:0075050"}


id: MONDO:0016732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysembryoplastic neuroepithelial tumor (obsolete MONDO:0016732)","termid":"MONDO:0016732","xrefs":{"Monarch":{"xref_id":"0016732"}}}


id: GO:1905542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-arginine import across plasma membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:14718525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-arginine import across plasma membrane","termid":"GO:1905541"},{"relation_name":"negatively_regulates","term_name":"L-arginine import across plasma membrane","termid":"GO:0097638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of L-arginine import across plasma membrane","secondary_identifiers":["GO:1902827"],"synonyms":[{"name":"down regulation of L-arginine import into cell","type":"exact"},{"name":"downregulation of L-arginine import into cell","type":"exact"},{"name":"inhibition of L-arginine import into cell","type":"narrow"},{"name":"negative regulation of L-arginine import into cell","type":"exact"}],"termid":"GO:1905542"}


id: PBO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase B homolog Plb1","termid":"PBO:0000760"}


id: GO:0043281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of a cysteine-type endopeptidase involved in apoptosis.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cysteine-type endopeptidase activity involved in apoptotic process (obsolete GO:0043281)","secondary_identifiers":["Reactome:R-HSA-205025"],"synonyms":[{"name":"regulation of caspase activation","type":"narrow"},{"name":"regulation of caspase activity","type":"broad"}],"termid":"GO:0043281"}


id: PBO:0076756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 6","termid":"PBO:0076756"}


id: PBO:0002760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Wis2","termid":"PBO:0002760"}


id: MONDO:0018027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isodicentric chromosome 15 syndrome is a chromosome abnormality that affects many different parts of the body. As the name suggests, people with this condition have an extra chromosome (called an isodicentric chromosome 15) which is made of two pieces of chromosome 15 that are stuck together end-to-end. Although the severity of the condition and the associated features vary from person to person, common signs and symptoms include poor muscle tone in newborns; developmental delay; mild to severe intellectual disability; delayed or absent speech; behavioral abnormalities; and seizures. Most cases of isodicentric chromosome 15 syndrome occur sporadically in people with no family history of the condition. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005153"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplication/inversion 15q11","secondary_identifiers":["Orphanet:3306","SCTID:723332005","UMLS:C3711376","MEDGEN:777984","MESH:C580205","GARD:5153"],"synonyms":[{"name":"Duplication/inversion type 15q11","type":"exact"},{"name":"Inv dup(15)","type":"exact"},{"name":"Invdup(15)","type":"exact"},{"name":"Isodicentric 15 chromosome","type":"exact"},{"name":"Isodicentric chromosome 15 syndrome","type":"related"},{"name":"chromosome 15q tetrasomy","type":"related"},{"name":"duplication/inversion 15q11","type":"exact"},{"name":"idic(15)","type":"exact"},{"name":"inverted duplication 15","type":"related"},{"name":"non-distal tetrasomy 15q","type":"exact"},{"name":"non-telomeric tetrasomy 15q","type":"exact"},{"name":"tetrasomy 15q","type":"related"}],"termid":"MONDO:0018027","xrefs":{"Monarch":{"xref_id":"0018027"}}}


id: FYPO:0002147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable. The population may be mixed with respect to other phenotypes (e.g. whether cell division occurs).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination (obsolete FYPO:0002147)","synonyms":[{"name":"cell population inviable after spore germination","type":"exact"},{"name":"inviable germinated spore population","type":"exact"},{"name":"population of inviable germinated spores","type":"exact"}],"termid":"FYPO:0002147"}


id: GO:0006984
data:
  {"annotated_genes":["SJAG_05286","SJAG_04384","SJAG_02104","SJAG_02703","SJAG_01632","SJAG_02318","SJAG_03501","SJAG_00293","SJAG_01585","SJAG_02682","SJAG_04573","SJAG_01150","SJAG_01253","SJAG_05304","SJAG_00718","SJAG_03302","SJAG_04018","SJAG_03345","SJAG_01657","SJAG_04151","SJAG_00642","SJAG_01307","SJAG_03568"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118861],"is_not":false,"summary":null,"term":"GO:0006984"},{"annotations":[107819,93072,113674],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000639"},{"annotations":[115410,80212,62212,115408],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000640"},{"annotations":[120452,120233,104005,114534,90806,64682,91475,105876,91088,70461,65993,118376,95731,114787,94484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032933"}]},"cv_name":"biological_process","definition":"The series of molecular signals that conveys information from the endoplasmic reticulum to the nucleus, usually resulting in a change in transcriptional regulation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_00718":null,"SJAG_01150":null,"SJAG_01253":null,"SJAG_01307":null,"SJAG_01585":null,"SJAG_01632":null,"SJAG_01657":null,"SJAG_02104":null,"SJAG_02318":null,"SJAG_02682":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_03345":null,"SJAG_03501":null,"SJAG_03568":null,"SJAG_04018":null,"SJAG_04151":null,"SJAG_04384":null,"SJAG_04573":null,"SJAG_05286":null,"SJAG_05304":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ER-nucleus signaling pathway","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"ER to nucleus signaling pathway","type":"exact"},{"name":"ER to nucleus signalling pathway","type":"exact"},{"name":"ER-nuclear signaling pathway","type":"exact"},{"name":"ER-nuclear signalling pathway","type":"exact"},{"name":"endoplasmic reticulum to nucleus signaling pathway","type":"exact"},{"name":"endoplasmic reticulum-nuclear signaling pathway","type":"exact"}],"termid":"GO:0006984","terms_by_termid":{"GO:0006984":null,"GO:0032933":null,"GO:2000639":null,"GO:2000640":null}}


id: MONDO:1010881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in sheep due to a mutation in the CLN6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, sheep","termid":"MONDO:1011578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN6-related, sheep","secondary_identifiers":["OMIA:001443-9940"],"synonyms":[{"name":"CLN6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 6, sheep","type":"related"}],"termid":"MONDO:1010881","xrefs":{"Monarch":{"xref_id":"1010881"}}}


id: MONDO:0003076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinoblastoma that only involves a single eye.","definition_xrefs":["NCIT:C8714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"unilateral retinoblastoma","secondary_identifiers":["DOID:4651","MEDGEN:208929","UMLS:C0854915"],"termid":"MONDO:0003076","xrefs":{"Monarch":{"xref_id":"0003076"}}}


id: MONDO:0014204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 5","secondary_identifiers":["OMIM:615483","GARD:15973","UMLS:C3809645","MEDGEN:815975"],"synonyms":[{"name":"IBGC5","type":"related"},{"name":"basal ganglia calcification, idiopathic, 5","type":"exact"},{"name":"basal ganglia calcification, idiopathic, type 5","type":"exact"}],"termid":"MONDO:0014204","xrefs":{"Monarch":{"xref_id":"0014204"}}}


id: GO:1990135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavonoid + 3'-phosphoadenosine-5'-phosphosulfate = sulfated flavonoid + adenosine-3',5'-diphosphate. This reaction is the transfer of a sulfate group to the hydroxyl group of a flavonoid acceptor, producing the sulfated flavonoid derivative.","definition_xrefs":["PMID:23611783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"flavonoid sulfotransferase activity","termid":"GO:1990135"}


id: GO:0015985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that provides energy for the synthesis of ATP or GTP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transport","termid":"GO:1902600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"energy coupled proton transport, down electrochemical gradient","termid":"GO:0015985"}


id: MONDO:0013239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 41 is a pure form of hereditary spastic paraplegia characterized by onset in adolescence or early adulthood of slowly progressive spastic paraplegia, proximal muscle weakness of the lower extremities and small hand muscles, hyperreflexia, spastic gait and mild urinary compromise.","definition_xrefs":["Orphanet:320355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 41","secondary_identifiers":["UMLS:C3888208","SCTID:763069002","GARD:17471","OMIM:613364","DOID:0110793","MEDGEN:854815"],"synonyms":[{"name":"SPG41","type":"exact"},{"name":"autosomal dominant spastic paraplegia 41","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 41","type":"exact"},{"name":"hereditary spastic paraplegia type 41","type":"exact"},{"name":"spastic paraplegia 41, autosomal dominant","type":"related"}],"termid":"MONDO:0013239","xrefs":{"Monarch":{"xref_id":"0013239"}}}


id: GO:0001186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of binding to an RNA polymerase I (RNAP I) transcription regulator and recruiting it to the general transcription machinery complex in order to modulate transcription initiation.","definition_xrefs":["PMID:12381659","GOC:txnOH-2018","PMID:14969726","PMID:8057832"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase I transcription regulator recruiting activity (obsolete GO:0001186)","synonyms":[{"name":"RNA polymerase I transcription factor recruiting activity","type":"exact"},{"name":"RNA polymerase I transcription factor recruiting transcription factor activity","type":"exact"},{"name":"transcription factor activity, RNA polymerase I transcription factor recruiting","type":"related"}],"termid":"GO:0001186"}


id: PBO:0072782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAE1 pseudogene 1","termid":"PBO:0072782"}


id: PBO:0053666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 844","termid":"PBO:0053666"}


id: PBO:0052106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A regulatory beta subunit 1","termid":"PBO:0052106"}


id: SO:0001815
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that does not lead to any change in the amino acid sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_variant_quality","termid":"SO:0001814"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synonymous","termid":"SO:0001815"}


id: FYPO:0007551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:19158664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin during cellular response to hydroxyurea","synonyms":[{"name":"increased protein localisation to chromatin during cellular response to hydroxyurea","type":"exact"},{"name":"increased protein localization to chromatin during cellular response to HU","type":"exact"},{"name":"increased protein localization to chromatin during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007551"}


id: MONDO:0010149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transcobalamin deficiency (TC) is a disorder of cobalamin transport that usually presents during the first few months of life and is characterized by megaloblastic anemia, failure to thrive, vomiting, weakness and pancytopenia.","definition_xrefs":["Orphanet:859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0005046","MONDO:0005066"],"is_obsolete":false,"name":"transcobalamin II deficiency","secondary_identifiers":["MEDGEN:137976","OMIM:275350","ICD10CM:D51.2","UMLS:C0342701","DOID:0050818","NCIT:C142806","SCTID:237934001","GARD:12338"],"synonyms":[{"name":"TC 2 deficiency","type":"related"},{"name":"TCN2 deficiency","type":"exact"},{"name":"Tcn2 deficiency","type":"related"},{"name":"inherited deficiency of transcobalamin","type":"exact"},{"name":"transcobalamin 2 deficiency","type":"related"},{"name":"transcobalamin II deficiency","type":"exact"},{"name":"transcobalamin deficiency","type":"related"}],"termid":"MONDO:0010149","xrefs":{"Monarch":{"xref_id":"0010149"}}}


id: PBO:0062995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 1","termid":"PBO:0062995"}


id: GO:0052162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of calcium ion fluxes as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated perturbation of defense-related host calcium ion flux (obsolete GO:0052162)","synonyms":[{"name":"modulation by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of defense-related host Ca2+ flux","type":"exact"},{"name":"modulation by symbiont of defense-related host calcium ion flux","type":"exact"}],"termid":"GO:0052162"}


id: MONDO:0015516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, non-syndromic limb reduction defect disorder characterized by unilateral or bilateral brachydactyly, cutaneous syndactyly and global hypoplasia of the hand and/or foot, with underlying muscles, tendons, ligaments and bones being affected but without other associated limb anomalies. Patients typically present short, stiff, webbed or missing fingers and/or toes which are often replaced with small stumps (nubbins) with residual nails.","definition_xrefs":["Orphanet:1570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly","termid":"MONDO:0017424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbrachydactyly of hands and feet","secondary_identifiers":["UMLS:C2931719","MESH:C538062","GARD:1680","icd11.foundation:159463685","MEDGEN:419146"],"synonyms":[{"name":"De Smet-Fabry-Fryns syndrome","type":"exact"},{"name":"frints de Smet Fabry Fryns syndrome","type":"exact"},{"name":"symbrachydactyly of the hand and foot","type":"exact"}],"termid":"MONDO:0015516","xrefs":{"Monarch":{"xref_id":"0015516"}}}


id: PBO:0074937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 103B","termid":"PBO:0074937"}


id: GO:0032625
data:
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id: GO:0010917
data:
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id: GO:0000976
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