# terms

id: GO:0098554
data:
  {"annotated_genes":["SJAG_02196","SJAG_02102","SJAG_02163","SJAG_04821","SJAG_03056","SJAG_01307","SJAG_04018","SJAG_01178","SJAG_01940","SJAG_03311","SJAG_04583","SJAG_00554","SJAG_00747"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77804,95741,96938,99651,100211,100551,104195,107757,109951,111798,112962,116102,118721],"is_not":false,"summary":null,"term":"GO:0098554"}]},"cv_name":"cellular_component","definition":"The side (leaflet) of the plasma membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_00747":null,"SJAG_01178":null,"SJAG_01307":null,"SJAG_01940":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02196":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_04018":null,"SJAG_04583":null,"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005789","GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic side of endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098554","terms_by_termid":{"GO:0098554":null}}


id: PATO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a teardrop.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bulbous","synonyms":[{"name":" bulblike","type":"exact"},{"name":"bulb-shaped","type":"exact"},{"name":"swollen","type":"related"}],"termid":"PATO:0002210"}


id: PBO:0027337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027337"}


id: GO:0103057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A19 + O2 + 2-oxoglutarate = H+ + gibberellin A20 + 2 carbon dioxide + succinate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A19, 2-oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0103057)","termid":"GO:0103057"}


id: GO:0140935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone deubiquitinase that cleaves ubiquitin from the conserved C-terminal lysine residue of a histone H2B protein to which it is conjugated. The conserved lysine residue is K119 in fission yeast, K123 in budding yeast, and K120 in mammals.","definition_xrefs":["PMID:15657442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B deubiquitinase activity","termid":"GO:0140936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0008233","GO:0003824","GO:0003674","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"histone H2B conserved C-terminal lysine deubiquitinase activity","synonyms":[{"name":"histone conserved C-terminal lysine deubiquitination","type":"related"}],"termid":"GO:0140935"}


id: PBO:0070299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 5","termid":"PBO:0070299"}


id: MONDO:0003874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serous adenocarcinoma that arises from the ovary and is characterized by the presence of a papillary architectural pattern.","definition_xrefs":["NCIT:C6256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"ovarian papillary tumor","termid":"MONDO:0003813"},{"relation_name":"is_a","term_name":"ovarian serous adenocarcinoma","termid":"MONDO:0005211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian serous surface papillary adenocarcinoma","secondary_identifiers":["DOID:6408","UMLS:C1335178","MEDGEN:233279"],"synonyms":[{"name":"ovarian serous surface papillary adenocarcinoma","type":"exact"},{"name":"ovary papillary carcinoma","type":"exact"},{"name":"serous surface papillary carcinoma of ovary","type":"exact"},{"name":"serous surface papillary carcinoma of the ovary","type":"exact"}],"termid":"MONDO:0003874","xrefs":{"Monarch":{"xref_id":"0003874"}}}


id: FYPO:0001022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to high osmolarity.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth during cellular response to osmotic stress","termid":"FYPO:0001021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth during cellular response to high osmolarity","synonyms":[{"name":"normal cell population growth during cellular response to high osmolarity","type":"exact"},{"name":"normal cell population growth during cellular response to hyperosmotic conditions","type":"exact"},{"name":"normal cellular response to high osmolarity","type":"related"},{"name":"normal vegetative cell population growth during cellular response to high osmolarity","type":"exact"}],"termid":"FYPO:0001022"}


id: GO:0090205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:tb","GOC:sl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of cholesterol metabolic process","termid":"GO:0090181"},{"relation_name":"positively_regulates","term_name":"cholesterol metabolic process","termid":"GO:0008203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol metabolic process","termid":"GO:0090205"}


id: MONDO:0011065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hunter-McAlpine craniosynostosis is characterized by craniosynostosis, intellectual deficit, short stature, facial dysmorphism (oval face with almond-shaped palpebral fissures, droopy eyelids and a small nose) and minor distal anomalies. It has been described in 10 patients. Transmission is autosomal dominant and the syndrome is associated with partial duplication of the long arm of chromosome 5 (5q35-5qter).","definition_xrefs":["Orphanet:97340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Hunter-McAlpine craniosynostosis","secondary_identifiers":["MEDGEN:321949","SCTID:721227001","MESH:C536072","UMLS:C1832408","OMIM:601379","GARD:2754","icd11.foundation:1445975694"],"synonyms":[{"name":"Hunter-McAlpine craniosynostosis syndrome","type":"related"},{"name":"Hunter-McAlpine syndrome","type":"related"},{"name":"craniosynostosis, mental deficiency, almond-shaped palpebral fissures, downturned mouth, mild acral-skeletal anomalies, and short stature","type":"related"}],"termid":"MONDO:0011065","xrefs":{"Monarch":{"xref_id":"0011065"}}}


id: GO:1900903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hexadecanal biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of hexadecanal biosynthetic process","termid":"GO:1900902"},{"relation_name":"is_a","term_name":"negative regulation of hexadecanal metabolic process","termid":"GO:1900906"},{"relation_name":"negatively_regulates","term_name":"hexadecanal biosynthetic process","termid":"GO:0006634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hexadecanal biosynthetic process","synonyms":[{"name":"down regulation of hexadecanal anabolism","type":"related"},{"name":"down regulation of hexadecanal biosynthesis","type":"related"},{"name":"down regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"down regulation of hexadecanal formation","type":"related"},{"name":"down regulation of hexadecanal synthesis","type":"related"},{"name":"down regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"down regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"down-regulation of hexadecanal anabolism","type":"related"},{"name":"down-regulation of hexadecanal biosynthesis","type":"related"},{"name":"down-regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"down-regulation of hexadecanal formation","type":"related"},{"name":"down-regulation of hexadecanal synthesis","type":"related"},{"name":"down-regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"down-regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"downregulation of hexadecanal anabolism","type":"related"},{"name":"downregulation of hexadecanal biosynthesis","type":"related"},{"name":"downregulation of hexadecanal biosynthetic process","type":"exact"},{"name":"downregulation of hexadecanal formation","type":"related"},{"name":"downregulation of hexadecanal synthesis","type":"related"},{"name":"downregulation of palmitaldehyde biosynthesis","type":"related"},{"name":"downregulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"inhibition of hexadecanal anabolism","type":"narrow"},{"name":"inhibition of hexadecanal biosynthesis","type":"narrow"},{"name":"inhibition of hexadecanal biosynthetic process","type":"narrow"},{"name":"inhibition of hexadecanal formation","type":"narrow"},{"name":"inhibition of hexadecanal synthesis","type":"narrow"},{"name":"inhibition of palmitaldehyde biosynthesis","type":"narrow"},{"name":"inhibition of palmitaldehyde biosynthetic process","type":"narrow"},{"name":"negative regulation of hexadecanal anabolism","type":"related"},{"name":"negative regulation of hexadecanal biosynthesis","type":"related"},{"name":"negative regulation of hexadecanal formation","type":"related"},{"name":"negative regulation of hexadecanal synthesis","type":"related"},{"name":"negative regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"negative regulation of palmitaldehyde biosynthetic process","type":"related"}],"termid":"GO:1900903"}


id: PBO:0086105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of respiratory complex III; mitochondrial inner membrane protein; required for an early step in assembly of respiratory complex III (cytochrome bc1 complex); mRNA is targeted to mitochondria","termid":"PBO:0086105"}


id: MONDO:0003473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma that arises from the spinal cord.","definition_xrefs":["NCIT:C3875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"},{"relation_name":"is_a","term_name":"ependymal tumor of spinal cord","termid":"MONDO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spinal cord ependymoma","secondary_identifiers":["UMLS:C0238432","MONDO:0021544","DOID:5503","MEDGEN:65968","SCTID:254949006"],"synonyms":[{"name":"ependymal neoplasm of the spinal cord","type":"exact"},{"name":"ependymoma of spinal cord","type":"exact"},{"name":"ependymoma of the spinal cord","type":"exact"},{"name":"spinal cord ependymoma","type":"exact"}],"termid":"MONDO:0003473","xrefs":{"Monarch":{"xref_id":"0003473"}}}


id: PR:O42941
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cyp7 gene.","definition_xrefs":["UniProtKB:O42941","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase cyp7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.05c","synonyms":[{"name":"PPIase cyp7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cyp7","type":"exact"},{"name":"complexed with cdc5 protein 27 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cyclophilin 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase cyp7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42941"}


id: PBO:0068906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 148, pseudogene","termid":"PBO:0068906"}


id: MONDO:0013271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"frontonasal dysplasia - severe microphthalmia - severe facial clefting syndrome","secondary_identifiers":["MEDGEN:462056","UMLS:C3150706","DOID:0081047","GARD:12640","OMIM:613456","Orphanet:306542"],"synonyms":[{"name":"ALX1-related frontonasal dysplasia","type":"exact"},{"name":"FND3","type":"related"},{"name":"frontonasal dysplasia 3","type":"related"},{"name":"frontonasal dysplasia type 3","type":"exact"}],"termid":"MONDO:0013271","xrefs":{"Monarch":{"xref_id":"0013271"}}}


id: PBO:0055226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2652","termid":"PBO:0055226"}


id: FYPO:0007162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of karyogamy involved in conjugation with cellular fusion is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear fusion during mating","termid":"FYPO:0000510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000301","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of nuclear fusion during mating","synonyms":[{"name":"increased duration of karyogamy","type":"exact"},{"name":"increased duration of karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"prolonged nuclear fusion during mating","type":"exact"}],"termid":"FYPO:0007162"}


id: GO:0102982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + NAD = H+ + UDP-3-keto-alpha-D-glucose + NADH.","definition_xrefs":["PMID:11278540","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-3-dehydro-alpha-D-glucose dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-9578","RHEA:35755"],"termid":"GO:0102982"}


id: MONDO:0100092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial cortical myoclonus caused by heterozygous mutation in the SCN8A gene on chromosome 12q13.","definition_xrefs":["OMIM:618364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus, familial","termid":"MONDO:0013981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, familial, 2","secondary_identifiers":["UMLS:C5193056","MEDGEN:1683864"],"synonyms":[{"name":"MYOCL2","type":"exact"}],"termid":"MONDO:0100092","xrefs":{"Monarch":{"xref_id":"0100092"}}}


id: PBO:0048455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain containing 2","termid":"PBO:0048455"}


id: PBO:0063852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone immunomodulatory binding factor 1","termid":"PBO:0063852"}


id: PBO:0066390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reeler domain containing 1","termid":"PBO:0066390"}


id: PBO:0076252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic vesicle glycoprotein 2A","termid":"PBO:0076252"}


id: GO:1902996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neurofibrillary tangle assembly.","definition_xrefs":["PMID:15897157","GOC:sjp","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inclusion body assembly","termid":"GO:0090083"},{"relation_name":"regulates","term_name":"neurofibrillary tangle assembly","termid":"GO:1902988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of neurofibrillary tangle assembly","synonyms":[{"name":"regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"regulation of neurofibrillary tangle formation","type":"exact"},{"name":"regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"regulation of star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902996"}


id: PBO:0053431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 376","termid":"PBO:0053431"}


id: PR:000027512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-phase inducer phosphatase phosphorylated 1 in Schizosaccharomyces pombe. This form is produced by phosphorylation by Cds1 or Chk1 during replication checkpoint. Example: UniProtKB:P06652-1, Ser-99/Ser-192/Ser-359, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:9774107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-phase inducer phosphatase","termid":"PR:000027506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc25/Phos(S99,S192,S359)","pombase_gene_id":"SPAC24H6.05","synonyms":[{"name":"PomBase_original_PRO_term_name: M-phase inducer phosphatase phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc25/Phos:1","type":"exact"},{"name":"cdc25/Phos(S99,S192,S359)","type":"exact"}],"termid":"PR:000027512"}


id: PATO:0002445
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being twisted or turned.","definition_xrefs":["freedictionary:freedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsioned","synonyms":[{"name":"twisted","type":"exact"}],"termid":"PATO:0002445"}


id: GO:0009250
data:
  {"annotated_genes":["SJAG_04666","SJAG_04659","SJAG_02278","SJAG_02222","SJAG_03123","SJAG_00876","SJAG_04184","SJAG_01288","SJAG_05285","SJAG_00424","SJAG_03705","SJAG_04771","SJAG_04668","SJAG_04509","SJAG_00610","SJAG_04236","SJAG_01028","SJAG_04073","SJAG_02590","SJAG_02916","SJAG_01453","SJAG_01290","SJAG_00963","SJAG_04462","SJAG_01835","SJAG_02446","SJAG_01255","SJAG_04483","SJAG_03587","SJAG_00218","SJAG_01376","SJAG_01787","SJAG_03057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64249,78574,76943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[96312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[72369,75281,75109,80559,73158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[74756,108030,76275,77629,115133,93434,72799,117802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104540,79999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[80809,78867],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[94261,89321],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[89704],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[69386,92597,119901,120034,94245,107264,107839],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[91262,96799,94267,104749],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01028":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"glucan anabolism","type":"exact"},{"name":"glucan biosynthesis","type":"exact"},{"name":"glucan formation","type":"exact"},{"name":"glucan synthesis","type":"exact"}],"termid":"GO:0009250","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: FYPO:0003226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to mitotic spindle","synonyms":[{"name":"delayed onset of protein localisation to mitotic spindle","type":"exact"},{"name":"delayed onset of protein localization to spindle during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein mitotic spindle to mitotic spindle during vegetative growth","type":"exact"},{"name":"delayed protein localization to mitotic spindle","type":"exact"}],"termid":"FYPO:0003226"}


id: GO:1902461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal stem cell proliferation.","definition_xrefs":["GOC:pm","GOC:TermGenie","PMID:18672106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell proliferation","termid":"GO:1902460"},{"relation_name":"is_a","term_name":"negative regulation of stem cell proliferation","termid":"GO:2000647"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal stem cell proliferation","synonyms":[{"name":"down regulation of MSC proliferation","type":"exact"},{"name":"down regulation of mesenchymal stem cell proliferation","type":"exact"},{"name":"down-regulation of MSC proliferation","type":"exact"},{"name":"down-regulation of mesenchymal stem cell proliferation","type":"exact"},{"name":"downregulation of MSC proliferation","type":"exact"},{"name":"downregulation of mesenchymal stem cell proliferation","type":"exact"},{"name":"inhibition of MSC proliferation","type":"narrow"},{"name":"inhibition of mesenchymal stem cell proliferation","type":"narrow"},{"name":"negative regulation of MSC proliferation","type":"exact"}],"termid":"GO:1902461"}


id: MONDO:1011501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex that occurs in water buffalo.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, non-human animal","termid":"MONDO:1011428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, water buffalo","secondary_identifiers":["OMIA:002082-89462"],"termid":"MONDO:1011501","xrefs":{"Monarch":{"xref_id":"1011501"}}}


id: MONDO:0044964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma arising from the minor salivary glands in the oral cavity. It is often asymptomatic and detected during a routine dental examination.","definition_xrefs":["NCIT:C8177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"oral cavity mucoepidermoid carcinoma","secondary_identifiers":["UMLS:C0280309","MEDGEN:83629"],"synonyms":[{"name":"mucoepidermoid carcinoma of oral cavity","type":"exact"},{"name":"mucoepidermoid carcinoma of the oral cavity","type":"exact"},{"name":"oral cavity mucoepidermoid cancer","type":"exact"},{"name":"oral cavity mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0044964","xrefs":{"Monarch":{"xref_id":"0044964"}}}


id: PBO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ctr4","termid":"PBO:0000340"}


id: GO:0071229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of the dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["Wikipedia:Acid","GOC:mah","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acid chemical","synonyms":[{"name":"cellular response to acid","type":"broad"},{"name":"cellular response to acid anion","type":"related"},{"name":"cellular response to oxoanion","type":"related"}],"termid":"GO:0071229"}


id: FYPO:0000724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of N-methyl-N'-nitro-N-nitrosoguanidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to N-methyl-N'-nitro-N-nitrosoguanidine","synonyms":[{"name":"resistance to N-methyl-N'-nitro-N-nitrosoguanidine during mitotic cell cycle","type":"related"},{"name":"resistance to N-methyl-N'-nitro-N-nitrosoguanidine during vegetative growth","type":"exact"},{"name":"resistance to methylnitronitrosoguanidine","type":"exact"},{"name":"resistant to MNNG","type":"exact"},{"name":"resistant to N-methyl-N'-nitro-N-nitrosoguanidine","type":"exact"}],"termid":"FYPO:0000724"}


id: GO:0010492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of shoot apical meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:tb","PMID:17461786","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of shoot apical meristem identity","termid":"GO:0010492"}


id: PBO:0090571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1/Yta4","termid":"PBO:0090571"}


id: MONDO:0003721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma arising from the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraosseous osteosarcoma","termid":"MONDO:0002621"},{"relation_name":"is_a","term_name":"kidney sarcoma","termid":"MONDO:0002930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"kidney osteogenic sarcoma","secondary_identifiers":["UMLS:C1335747","DOID:5983","MEDGEN:235547","NCIT:C6181"],"synonyms":[{"name":"kidney extraskeletal osteosarcoma","type":"exact"},{"name":"kidney osteogenic sarcoma","type":"exact"},{"name":"kidney osteosarcoma","type":"exact"},{"name":"kidney osteosarcoma (disease)","type":"exact"},{"name":"osteogenic sarcoma of kidney","type":"exact"},{"name":"osteogenic sarcoma of the kidney","type":"exact"},{"name":"osteosarcoma of kidney","type":"exact"},{"name":"osteosarcoma of the kidney","type":"exact"},{"name":"renal extraskeletal osteosarcoma","type":"exact"},{"name":"renal osteogenic sarcoma","type":"exact"},{"name":"renal osteosarcoma","type":"exact"}],"termid":"MONDO:0003721","xrefs":{"Monarch":{"xref_id":"0003721"}}}


id: PBO:0050607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 1 pseudogene 1","termid":"PBO:0050607"}


id: PBO:0030088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_leucine_nitrogen_source","termid":"PBO:0030088"}


id: MONDO:0018904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare glomerular disease characterized by a pattern of glomerular injury on kidney biopsy with characteristic light microscopic changes: mesangial hypercellularity, endocapillary proliferation, and thickening of the glomerular basement membrane (GBM). On the basis of immunofluorescence (IF) the disorder is divided into C3 glomerulopathy (C3G) or immunoglobulin-mediated membranoproliferative glomerulonephritis. Through electron microscopy C3G is further divided into Dense deposit disease, with highly electrondense deposits in the glomerular basement membrane, and C3 glomerulonephritis, with mesangial, intramembranous, subendothelial and subepithelial deposits. Secondary causes (autoimmune, infectious, malignancies) are excluded.","definition_xrefs":["Orphanet:54370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"primary membranoproliferative glomerulonephritis","secondary_identifiers":["SCTID:80321008","MedDRA:10018370","NANDO:1200725","GARD:11982","ICD9:583.2","NANDO:2200123"],"synonyms":[{"name":"MPGN","type":"exact"},{"name":"Mesangiocapillary glomerulonephritis","type":"exact"},{"name":"membranoproliferative glomerulonephritis","type":"related"}],"termid":"MONDO:0018904","xrefs":{"Monarch":{"xref_id":"0018904"}}}


id: GO:0140078
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66641],"is_not":false,"summary":null,"term":"GO:0140078"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of an AP site 3' of the baseless site by a beta-lyase mechanism, leaving an unsaturated aldehyde, termed a 3'-(4-hydroxy-5-phospho-2-pentenal) residue, and a 5'-phosphate.","definition_xrefs":["PMID:1698278","RHEA:66592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-(apurinic or apyrimidinic site) endonuclease activity","termid":"GO:0003906"},{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097","GO:0016829"],"is_obsolete":false,"name":"class I DNA-(apurinic or apyrimidinic site) endonuclease activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:4.2.99.18-RXN","EC:4.2.99.18","Wikipedia:AP_endonuclease"],"synonyms":[{"name":"AP endonuclease class I activity","type":"related"},{"name":"AP lyase activity","type":"related"},{"name":"AP site-DNA 5'-phosphomonoester-lyase activity","type":"exact"},{"name":"DNA-(apurinic or apyrimidinic site) 5'-phosphomonoester-lyase activity","type":"exact"},{"name":"DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"},{"name":"class I AP endonuclease activity","type":"related"},{"name":"class I DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"}],"termid":"GO:0140078","terms_by_termid":{"GO:0140078":null}}


id: MONDO:1011313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorder of development or morphogenesis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313","xrefs":{"Monarch":{"xref_id":"1011313"}}}


id: MONDO:0001035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypopyon","termid":"MONDO:0001036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hypopyon ulcer","secondary_identifiers":["ICD9:370.04","UMLS:C0155070","DOID:10442","MEDGEN:509768","SCTID:6395007"],"termid":"MONDO:0001035","xrefs":{"Monarch":{"xref_id":"0001035"}}}


id: FYPO:0001714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malate into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal malate import","termid":"FYPO:0001713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased malate import","synonyms":[{"name":"decreased malate import across plasma membrane","type":"exact"},{"name":"decreased malate import during mitotic cell cycle","type":"related"},{"name":"decreased malate import during vegetative growth","type":"exact"},{"name":"decreased malate import into cell","type":"exact"},{"name":"decreased malate uptake","type":"exact"},{"name":"decreased malic acid import","type":"related"},{"name":"reduced malate import","type":"exact"}],"termid":"FYPO:0001714"}


id: MONDO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Acanthocephala.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acanthocephaliasis","secondary_identifiers":["DOID:0050254","UMLS:C0277331","SCTID:105713003","icd11.foundation:1026340475","MEDGEN:548052"],"synonyms":[{"name":"Acanthocephala caused disease or disorder","type":"exact"},{"name":"Acanthocephala disease or disorder","type":"exact"},{"name":"Acanthocephala infectious disease","type":"exact"},{"name":"disease caused by Acanthocephala","type":"exact"},{"name":"disease due to Acanthocephala","type":"exact"},{"name":"infection by Acanthocephala","type":"exact"},{"name":"infection by thorny-headed worm","type":"exact"}],"termid":"MONDO:0000295","xrefs":{"Monarch":{"xref_id":"0000295"}}}


id: PBO:0071787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p14","termid":"PBO:0071787"}


id: PBO:0067252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 326, pseudogene","termid":"PBO:0067252"}


id: GO:0034703
data:
  {"annotated_genes":["SJAG_02598","SJAG_00438","SJAG_00836","SJAG_04122","SJAG_05229","SJAG_00915","SJAG_02564","SJAG_MIT37","SJAG_MIT15","SJAG_00542","SJAG_03114","SJAG_05204","SJAG_MIT09","SJAG_00985","SJAG_03925","SJAG_00133","SJAG_02105","SJAG_07003"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[121078,68361,121083,105580,121072,79591,66170,57996,65120,74493,68578,60301,96702,117827,109835,65434,71917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045259"},{"annotations":[76210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"An ion channel complex through which cations pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cation channel complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0034703","terms_by_termid":{"GO:0005891":null,"GO:0045259":null}}


id: PATO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amount which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"present","termid":"PATO:0000467"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased amount","secondary_identifiers":["PATO:0000419","PATO:0000468"],"synonyms":[{"name":"decreased","type":"related"},{"name":"decreased number","type":"exact"},{"name":"present in fewer numbers in organism","type":"exact"},{"name":"reduced","type":"related"},{"name":"subnumerary","type":"related"}],"termid":"PATO:0001997"}


id: GO:2001165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues.","definition_xrefs":["PMID:15149594"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (obsolete GO:2001165)","termid":"GO:2001165"}


id: FYPO:0005584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more diglycerides measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular diglyceride level","synonyms":[{"name":"decreased cellular DAG level","type":"exact"},{"name":"decreased cellular diacylglycerol level","type":"exact"},{"name":"decreased cellular diglyceride level during mitotic cell cycle","type":"related"},{"name":"decreased cellular diglyceride level during vegetative growth","type":"exact"},{"name":"decreased diglyceride accumulation","type":"related"},{"name":"reduced cellular diglyceride level","type":"exact"}],"termid":"FYPO:0005584"}


id: PBO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain","termid":"PBO:0000496"}


id: PBO:0080827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 associated factor 2","termid":"PBO:0080827"}


id: PBO:0059395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S28","termid":"PBO:0059395"}


id: MONDO:1012088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alpha fucosidosis, non-human animal","termid":"MONDO:1011783"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha fucosidosis, domestic cat","secondary_identifiers":["OMIA:000396-9685"],"termid":"MONDO:1012088","xrefs":{"Monarch":{"xref_id":"1012088"}}}


id: MONDO:0019947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the CAV3 gene, encoding caveolin-3. It is characterized by mechanically triggered contractions of skeletal muscles. Limb-girdle muscular dystrophy type 1C is an allelic disorder with an overlapping phenotype.","definition_xrefs":["NCIT:C148325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited rippling muscle disease","termid":"MONDO:0020704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"rippling muscle disease 2","secondary_identifiers":["OMIM:606072","MEDGEN:371357","DOID:0060255","GARD:9164","Orphanet:97238","UMLS:C1832560"],"synonyms":[{"name":"CAV3 autosomal dominant limb-girdle muscular dystrophy","type":"exact"},{"name":"CAV3 rippling muscle disease","type":"exact"},{"name":"LGMD1C","type":"exact"},{"name":"RMD2","type":"exact"},{"name":"autosomal dominant limb-girdle muscular dystrophy caused by mutation in CAV3","type":"exact"},{"name":"limb-girdle muscular dystrophy due to caveolin-3 deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 1C","type":"related"},{"name":"muscular dystrophy limb-girdle type IC","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 1C","type":"related"},{"name":"muscular dystrophy, limb-girdle, type IC","type":"related"},{"name":"rippling muscle disease 2","type":"exact"},{"name":"rippling muscle disease caused by mutation in CAV3","type":"exact"},{"name":"rippling muscle disease type 2","type":"exact"}],"termid":"MONDO:0019947","xrefs":{"Monarch":{"xref_id":"0019947"}}}


id: MONDO:0013726
data:
  {"annotated_genes":["SJAG_02848","SJAG_02384"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87343,87344],"is_not":false,"summary":null,"term":"MONDO:0013726"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"encephalopathy due to mitochondrial and peroxisomal fission defect","termid":"MONDO:0054865"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0019053"],"is_obsolete":false,"name":"encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070347","Orphanet:330050","MEDGEN:482290","GARD:17509","UMLS:C3280660","OMIM:614388"],"synonyms":[{"name":"DNM1L-associated encephalopathy due to peroxisomal and mitochondrial fission defect","type":"exact"},{"name":"EMPF","type":"related"},{"name":"EMPF1","type":"related"},{"name":"encephalopathy due to defective mitochondrial and peroxisomal fission 1","type":"related"},{"name":"encephalopathy, lethal, due to defective mitochondrial and peroxisomal fission","type":"related"},{"name":"encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1","type":"exact"},{"name":"lethal encephalopathy due to mitochondrial and peroxisomal fission defect","type":"exact"}],"termid":"MONDO:0013726","terms_by_termid":{"MONDO:0013726":null},"xrefs":{"Monarch":{"xref_id":"0013726"}}}


id: GO:0031125
data:
  {"annotated_genes":["SJAG_00081","SJAG_04818","SJAG_04174","SJAG_04153","SJAG_04321","SJAG_03745","SJAG_02993","SJAG_00854","SJAG_03179","SJAG_01191","SJAG_04084","SJAG_01818","SJAG_04006","SJAG_04369","SJAG_01521","SJAG_04824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000461"},{"annotations":[91801,100817,117425,76839,117865,72364,79461,108393,99112,74199,103975,81246,109386,73066,73369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000467"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"},{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04174":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"rRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"rRNA 3' end processing","type":"exact"}],"termid":"GO:0031125","terms_by_termid":{"GO:0000461":null,"GO:0000467":null}}


id: PBO:0090501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-associated protein","termid":"PBO:0090501"}


id: GO:0062009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the secondary palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The secondary palate is the part of the palate formed from the fusion of the two palatine shelves, extensions of the maxillary prominences.","definition_xrefs":["PMID:28784960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roof of mouth development","termid":"GO:0060021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary palate development","termid":"GO:0062009"}


id: PBO:0087638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis prior to SNARE-mediated fusion; PtdIns[4,5]P2-binding protein that localizes to exocytic sites in an actin-independent manner, targeting and anchoring the exocyst with Sec3p; involved in exocyst assembly; direct downstream effector of Rho3p and Cdc42p; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0087638"}


id: PBO:0073560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 3","termid":"PBO:0073560"}


id: MONDO:0011461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any febrile seizures, familial in which the cause of the disease is a mutation in the SCN1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"febrile seizures, familial","termid":"MONDO:0000032"},{"relation_name":"is_a","term_name":"generalized epilepsy with febrile seizures plus","termid":"MONDO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus, type 2","secondary_identifiers":["DOID:0111294","OMIM:604403","UMLS:C1858673","GARD:18661","MESH:C565810","MEDGEN:388117"],"synonyms":[{"name":"GEFS+, type 2","type":"exact"},{"name":"GEFSP2","type":"related"},{"name":"SCN1A febrile seizures, familial","type":"exact"},{"name":"febrile seizures, familial caused by mutation in SCN1A","type":"exact"},{"name":"febrile seizures, familial, 3A","type":"related"},{"name":"generalized epilepsy with febrile seizures plus, type 2","type":"exact"}],"termid":"MONDO:0011461","xrefs":{"Monarch":{"xref_id":"0011461"}}}


id: PBO:0071880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 18","termid":"PBO:0071880"}


id: PBO:0003358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) Clr6","termid":"PBO:0003358"}


id: MONDO:0016628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to a coagulation factors defect (obsolete MONDO:0016628)","secondary_identifiers":["Orphanet:248315"],"synonyms":[{"name":"rare bleeding disorder due to a coagulation factors defect","type":"narrow"},{"name":"rare coagulopathy due to a coagulation factor defect","type":"narrow"}],"termid":"MONDO:0016628","xrefs":{"Monarch":{"xref_id":"0016628"}}}


id: PATO:0001588
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of rate which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of rate","termid":"PATO:0001586"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of rate","synonyms":[{"name":"low variability of rate","type":"exact"}],"termid":"PATO:0001588"}


id: PBO:0030447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphatase_activity","termid":"PBO:0030447"}


id: FYPO:0000186
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[121219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121551],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[121215],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[121207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[121649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001971"},{"annotations":[121437,121435,121436],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"FYPO:0000671"},{"annotations":[121130,121442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[121506,121505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"},{"annotations":[121240],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[121497,121208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121552],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[121205,121204],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_02252":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03143":null,"SJAG_03444":null,"SJAG_03449":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":16,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild 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type"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_00118","SJAG_01143","SJAG_04522","SJAG_04280","SJAG_02392"],"name":"abnormal cell division during vegetative 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cycle","type":"related"}],"termid":"FYPO:0000186","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: SO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of discontinuous sequences.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_collection","synonyms":[{"name":"sequence collection","type":"exact"}],"termid":"SO:0001260"}


id: MONDO:0024286
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"}]},"cv_name":"mondo","definition":"A benign neoplasm arising from arteries or veins.","definition_xrefs":["NCIT:C8537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"},{"relation_name":"is_a","term_name":"blood vessel neoplasm","termid":"MONDO:0021080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"benign blood vessel neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0685121","DOID:60006","MEDGEN:195779"],"synonyms":[{"name":"benign blood vessel neoplasm","type":"exact"},{"name":"benign blood vessel tumor","type":"exact"},{"name":"benign blood vessel tumour","type":"exact"}],"termid":"MONDO:0024286","terms_by_termid":{"MONDO:0007154":null},"xrefs":{"Monarch":{"xref_id":"0024286"}}}


id: GO:1901499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hexane stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hexane","termid":"GO:1901499"}


id: PBO:0042992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 5","termid":"PBO:0042992"}


id: GO:0062231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of larval somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of somatic muscle development","termid":"GO:0062224"},{"relation_name":"is_a","term_name":"regulation of larval somatic muscle development","termid":"GO:0062229"},{"relation_name":"positively_regulates","term_name":"larval somatic muscle development","termid":"GO:0007526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of larval somatic muscle development","termid":"GO:0062231"}


id: GO:0102603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 12-demethyl-elloramycin + S-adenosyl-L-methionine = elloramycin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 12-demethyl-elloramycin C12a O-methyltransferase activity (obsolete GO:0102603)","termid":"GO:0102603"}


id: PBO:0067050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 70, pseudogene","termid":"PBO:0067050"}


id: PBO:0015241
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homooligomeric in h- cells","termid":"PBO:0015241"}


id: PBO:0088036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-binding protein of unknown function; contains one WD40 repeat in a beta-propeller fold; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; homolog of human WDR48/UAF1, which is involved in regulating the Fanconi anemia pathway; deletion mutant is sensitive to various chemicals including phenanthroline, sanguinarine, and nordihydroguaiaretic acid","termid":"PBO:0088036"}


id: PBO:0057431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550b-1","termid":"PBO:0057431"}


id: GO:1901498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetralin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tetralin","termid":"GO:1901498"}


id: GO:0039525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the organization of chromatin in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:sp","PMID:11483770","GOC:bf","PMID:16687403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host chromatin organization","secondary_identifiers":["VZ:899"],"synonyms":[{"name":"modulation by virus of host chromatin organisation","type":"exact"},{"name":"modulation by virus of host chromatin organization","type":"narrow"},{"name":"modulation of host chromatin by virus","type":"exact"},{"name":"modulation of host chromatin structure by virus","type":"exact"},{"name":"regulation by virus of host chromatin organization","type":"related"}],"termid":"GO:0039525"}


id: PBO:0070788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 18","termid":"PBO:0070788"}


id: GO:0006288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The ligation by DNA ligase of DNA strands. Ligation occurs after polymerase action to fill the gap left by the action of endonucleases during base-excision repair.","definition_xrefs":["ISBN:1550091131"],"gene_count":0,"genotype_count":0,"name":"obsolete base-excision repair, DNA ligation (obsolete GO:0006288)","termid":"GO:0006288"}


id: PBO:0077745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of EGR1, exonuclease","termid":"PBO:0077745"}


id: PBO:0059623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 4","termid":"PBO:0059623"}


id: MONDO:0018478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary hyperoxaluria (obsolete MONDO:0018478)","termid":"MONDO:0018478","xrefs":{"Monarch":{"xref_id":"0018478"}}}


id: PBO:0060518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear prelamin A recognition factor","termid":"PBO:0060518"}


id: PBO:0038761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 6","termid":"PBO:0038761"}


id: GO:0048909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line nerve over time, form its formation to the mature structure. The anterior lateral line nerve contains efferent axons that innervate hair cells of the ALL and afferent axons that project to an octavolateralis column in the hindbrain. The octavolateralis column consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","GOC:dgh","ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve development","termid":"GO:0048892"},{"relation_name":"part_of","term_name":"anterior lateral line system development","termid":"GO:0048898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line nerve development","secondary_identifiers":["GO:0021734"],"synonyms":[{"name":"ALLN development","type":"exact"},{"name":"nALL development","type":"exact"},{"name":"rostral lateral line nerve development","type":"exact"}],"termid":"GO:0048909"}


id: GO:2000316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 17 type immune response.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 17 type immune response","synonyms":[{"name":"regulation of Th17 immune response","type":"exact"}],"termid":"GO:2000316"}


id: MONDO:0002820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid carcinoma (obsolete MONDO:0002820)","termid":"MONDO:0002820","xrefs":{"Monarch":{"xref_id":"0002820"}}}


id: GO:0042323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the duration or quality of non-rapid eye movement (NREM) sleep.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of circadian sleep/wake cycle, sleep","termid":"GO:0042321"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, non-REM sleep","termid":"GO:0045188"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, non-REM sleep","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, non-REM sleep","type":"narrow"},{"name":"negative regulation of non-REM sleep","type":"exact"}],"termid":"GO:0042323"}


id: PBO:0028182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mercury","termid":"PBO:0028182"}


id: MONDO:0009329
data:
  {"annotated_genes":["SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88883],"is_not":false,"summary":null,"term":"MONDO:0009329"}]},"cv_name":"mondo","definition":"A rare form of pulmonary arterial hypertension (PAH) characterized by a capillary infiltration of the pulmonary interstitium, bronchioles and pleura leading to elevated pulmonary arterial resistance and right heart failure. PCH is potentially fatal.","definition_xrefs":["Orphanet:199241"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pulmonary veno-occlusive disease and/or pulmonary capillary haemangiomatosis","termid":"MONDO:0018554"},{"relation_name":"is_a","term_name":"pulmonary venoocclusive disease","termid":"MONDO:0009937"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00169":null},"genotype_count":0,"is_obsolete":false,"name":"pulmonary venoocclusive disease 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:90956","UMLS:C0340848","MESH:C535861","SCTID:233949008","ICD9:416.8","OMIM:234810","GARD:15027","DOID:0081269"],"synonyms":[{"name":"PVOD2","type":"related"},{"name":"familial pulmonary capillary hemangiomatosis","type":"related"},{"name":"hemangiomatosis, familial pulmonary capillary","type":"related"},{"name":"pulmonary capillary hemangiomatosis","type":"broad"},{"name":"pulmonary venoocclusive disease 2, autosomal recessive","type":"related"}],"termid":"MONDO:0009329","terms_by_termid":{"MONDO:0009329":null},"xrefs":{"Monarch":{"xref_id":"0009329"}}}


id: PBO:0075218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snurportin 1","termid":"PBO:0075218"}


id: PBO:0034466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_mitochondrial_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0034466"}


id: PBO:0035993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0035993"}


id: PBO:0089699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Use1","termid":"PBO:0089699"}


id: PBO:0066292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member T, pseudogene","termid":"PBO:0066292"}


id: GO:0036404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which double-stranded small interfering RNA (ds siRNA) molecules are converted to single-stranded small interfering RNA (ss siRNA).","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete conversion of ds siRNA to ss siRNA (obsolete GO:0036404)","synonyms":[{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA","type":"related"}],"termid":"GO:0036404"}


id: GO:0042200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyanuric acid, a potential degradation product of triazine herbicides.","definition_xrefs":["UM-BBD_pathwayID:cya"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanuric acid metabolic process","termid":"GO:0042199"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanuric acid catabolic process","synonyms":[{"name":"cyanuric acid breakdown","type":"exact"},{"name":"cyanuric acid catabolism","type":"exact"},{"name":"cyanuric acid degradation","type":"exact"}],"termid":"GO:0042200"}


id: PBO:0031641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_shmoo_formation","termid":"PBO:0031641"}


id: GO:0016501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostacyclin (PGI(2)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostacyclin receptor activity","secondary_identifiers":["GO:0004959"],"synonyms":[{"name":"PGI receptor activity","type":"related"},{"name":"PGI(2) receptor activity","type":"exact"},{"name":"prostaglandin I receptor activity","type":"exact"}],"termid":"GO:0016501"}


id: PBO:0071483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 24","termid":"PBO:0071483"}


id: PBO:0113056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glucose deprivation induced stress granules; involved in P-body-dependent granule assembly; regulates TORC1 signaling and autophagy; interacts with Pab1p to regulate mRNA polyadenylation; interacts with Mkt1p to regulate HO translation; regulates expression of genes involved in gluconeogenesis and mitochondrial function through multiple mechanisms","termid":"PBO:0113056"}


id: GO:0046807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and maintenance of the viral scaffold around which the viral capsid is constructed.","definition_xrefs":["ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral capsid assembly","termid":"GO:0019069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral scaffold assembly and maintenance","termid":"GO:0046807"}


id: GO:0106063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with folate and transmitting the signal from one side of the membrane to the other by activating an associated G-protein, initiating a change in cell activity.","definition_xrefs":["PMID:26906738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled folate receptor activity","synonyms":[{"name":"G-protein coupled folate receptor activity","type":"exact"},{"name":"G-protein coupled folic acid receptor activity","type":"exact"}],"termid":"GO:0106063"}


id: MONDO:0016854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"49, XXXYY syndrome is a chromosome abnormality that occurs when a male inherits two extra copies of the X chromosome and one extra copy of the Y chromosome. The condition is extremely rare with only a handful of cases reported in the medical literature. Signs and symptoms associated with these cases include severe intellectual disability, distinctive facial features, normal to tall stature, gynecomastia, hypogonadism, and behavioral abnormalities. 49, XXXYY syndrome is likely caused by a mistake (called nondisjunction) that occurs at conception or during the formation of the sperm and/or egg. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"},{"relation_name":"is_a","term_name":"aneuploidy","termid":"MONDO:0700064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"49,XXXYY syndrome","secondary_identifiers":["GARD:10922","MEDGEN:1667231","UMLS:C4749586","Orphanet:261534"],"synonyms":[{"name":"49, XXXYY syndrome","type":"related"},{"name":"XXXYY syndrome","type":"related"}],"termid":"MONDO:0016854","xrefs":{"Monarch":{"xref_id":"0016854"}}}


id: GO:0047467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (E)-4-hydroxyphenylacetaldehyde oxime = (Z)-4-hydroxyphenylacetaldehyde oxime.","definition_xrefs":["EC:5.2.1.11","MetaCyc:5.2.1.11-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxyphenylacetaldehyde-oxime isomerase activity (obsolete GO:0047467)","termid":"GO:0047467"}


id: GO:1905554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood vessel branching.","definition_xrefs":["PMID:23201774","GOC:BHF","GOC:TermGenie","GOC:nc","GOC:BHF_telomere","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of angiogenesis","termid":"GO:0016525"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"is_a","term_name":"regulation of blood vessel branching","termid":"GO:1905553"},{"relation_name":"negatively_regulates","term_name":"branching involved in blood vessel morphogenesis","termid":"GO:0001569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel branching","synonyms":[{"name":"down regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"down regulation of patterning of blood vessels","type":"exact"},{"name":"down-regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"down-regulation of patterning of blood vessels","type":"exact"},{"name":"downregulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"downregulation of patterning of blood vessels","type":"exact"},{"name":"inhibition of branching involved in blood vessel morphogenesis","type":"narrow"},{"name":"inhibition of patterning of blood vessels","type":"narrow"},{"name":"negative regulation of branching involved in blood vessel morphogenesis","type":"exact"}],"termid":"GO:1905554"}


id: MOD:00067
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-D-glucuronoylglycine.","definition_xrefs":["PubMed:12716131","OMSSA:50","PubMed:10858503","PubMed:7398618","RESID:AA0058","PubMed:6493057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glucuronylated residue","termid":"MOD:00447"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-D-glucuronoylglycine","synonyms":[{"name":"2-(glucuronoylamino)ethanoic acid","type":"exact"},{"name":"Glucuronyl","type":"related"},{"name":"MOD_RES N-D-glucuronoyl glycine","type":"exact"},{"name":"N-D-glucuronoyl-glycine","type":"exact"},{"name":"N-D-glucuronyl-glycine","type":"exact"},{"name":"NGlcAGly","type":"exact"},{"name":"ntermpepglucuronylg","type":"exact"}],"termid":"MOD:00067"}


id: PATO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's lacking complete growth, differentiation, or development.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immature","synonyms":[{"name":"underdeveloped","type":"related"}],"termid":"PATO:0001501"}


id: PBO:0054610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2015","termid":"PBO:0054610"}


id: GO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulation of the activity of cyclin-dependent protein kinase 5 activator.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein kinase 5 activator regulator activity (obsolete GO:0016536)","synonyms":[{"name":"cyclin-dependent protein kinase 5 activator regulator activity","type":"exact"},{"name":"cyclin-dependent protein kinase 5 activator, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0016536"}


id: PBO:0025488
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrullinaemia type I","termid":"PBO:0025488"}


id: GO:0007156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}


id: GO:1990902
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell pole proximal to the most recent cell division.","definition_xrefs":["GOC:jh2","PMID:8226658","PMID:10231492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell pole","termid":"GO:0060187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"new cell pole","termid":"GO:1990902"}


id: PBO:0073105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sidekick cell adhesion molecule 1","termid":"PBO:0073105"}


id: MONDO:0975797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelofibrosis, congenital, with anemia, neutropenia, developmental delay, and ocular abnormalities","secondary_identifiers":["OMIM:620939"],"termid":"MONDO:0975797","xrefs":{"Monarch":{"xref_id":"0975797"}}}


id: PBO:0060755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3 pseudogene 5","termid":"PBO:0060755"}


id: GO:0099057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endocytic zone membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of presynaptic endocytic zone membrane (obsolete GO:0099057)","termid":"GO:0099057"}


id: PBO:0084689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial cruciform cutting endonuclease; cleaves Holliday junctions formed during recombination of mitochondrial DNA; CCE1 has a paralog, MRS1, that arose from the whole genome duplication","termid":"PBO:0084689"}


id: PBO:0084795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein involved in assembly of succinate dehydrogenase; has a role in maturation of the Sdh2p subunit; member of the LYR protein family; mutations in human ortholog SDHAF1 are associated with infantile leukoencephalopathy","termid":"PBO:0084795"}


id: MONDO:0005543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune hepatitis characterized by the presence of antinuclear antibody (ANA) and antismooth-muscle antibody (ASMA).","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hepatitis","termid":"MONDO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune hepatitis type 1","secondary_identifiers":["Orphanet:563576","MEDGEN:928833","UMLS:C4303164","icd11.foundation:260422751","SCTID:197284004","SCTID:721711009","GARD:22251","ICD9:571.49"],"synonyms":[{"name":"autoimmune hepatitis type 1","type":"exact"},{"name":"type 1 AIH","type":"exact"}],"termid":"MONDO:0005543","xrefs":{"Monarch":{"xref_id":"0005543"}}}


id: GO:0033614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase in the chloroplast thylakoid membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex assembly","termid":"GO:0043461"},{"relation_name":"part_of","term_name":"chloroplast organization","termid":"GO:0009658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"chloroplast proton-transporting ATP synthase complex assembly","termid":"GO:0033614"}


id: FYPO:0000244
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells are deprived of nutrients such as carbon or nitrogen.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability upon nutrient depletion","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased viability upon nutrient depletion","type":"exact"},{"name":"growth defect, required during nutrient depletion","type":"related"},{"name":"loss of cell population viability upon nutrient depletion","type":"exact"},{"name":"loss of viability upon nutrient starvation","type":"exact"},{"name":"reduced viability upon nutrient depletion","type":"exact"}],"termid":"FYPO:0000244","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0005231":null}}


id: FYPO:0005619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of sumoylated protein measured in the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased level of sumoylated protein in cell","synonyms":[{"name":"increased accumulation of sumoylated protein in cell","type":"related"},{"name":"increased level of sumoylated protein in cell during mitotic cell cycle","type":"related"},{"name":"increased level of sumoylated protein in cell during vegetative growth","type":"exact"},{"name":"increased sumoylated protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0005619"}


id: RO:0002455
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"mutualistically_interacts_with","termid":"RO:0002442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pollinates","termid":"RO:0002455"}


id: PBO:0042154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCL15-CCL14 readthrough (NMD candidate)","termid":"PBO:0042154"}


id: PR:O14264
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dfg10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C7D4.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.09c","synonyms":[{"name":"Spom972h-dfg10","type":"exact"}],"termid":"PR:O14264"}


id: PATO:0000647
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's undergoing unprogrammed cell death.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Necrotic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotic","termid":"PATO:0000647"}


id: PBO:0043220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin binding box of aftiphilin containing 1","termid":"PBO:0043220"}


id: PBO:0078537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 29","termid":"PBO:0078537"}


id: SO:0001495
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A centromere DNA Element I (CDEI) is a conserved region, part of the centromere, consisting of a consensus region that consists of a 25-bp which enables binding by the centromere DNA binding factor 3 (CBF3) complex.","definition_xrefs":["PMID:11222754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"point_centromere","termid":"SO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere_DNA_Element_III","synonyms":[{"name":"CDEIII","type":"exact"},{"name":"centromere DNA Element III","type":"exact"}],"termid":"SO:0001495"}


id: GO:0102297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: selenic acid + ATP + 2 H+ = adenylyl selenate + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete selenate adenylyltransferase activity (obsolete GO:0102297)","termid":"GO:0102297"}


id: PBO:0060249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL proto-oncogene, bHLH transcription factor","termid":"PBO:0060249"}


id: PBO:0074624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 22","termid":"PBO:0074624"}


id: PR:O74769
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bhd1 gene.","definition_xrefs":["UniProtKB:O74769","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin-like protein bhd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.08c","synonyms":[{"name":"Spom972h-bhd1","type":"exact"}],"termid":"PR:O74769"}


id: GO:0097450
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal process of astrocyte abutting non-neuronal surfaces in the brain.","definition_xrefs":["NIF_Subcellular:sao388182739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte projection","termid":"GO:0097449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"astrocyte end-foot","synonyms":[{"name":"astrocyte endfoot","type":"exact"}],"termid":"GO:0097450"}


id: PBO:0045552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 5 pseudogene 1","termid":"PBO:0045552"}


id: FYPO:0005069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation fails to separate chromosomes into two equal masses after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase. Unequal mitotic sister chromatid separation may be complete, with two distinct unequal DNA masses located at or near the ends of an elongated mitotic spindle, or incomplete.","definition_xrefs":["PMID:18180284","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal mitotic sister chromatid segregation","termid":"FYPO:0003241"},{"relation_name":"is_a","term_name":"abnormal mitosis following normal mitosis","termid":"FYPO:0004588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000337","FYPO:0000641"],"is_obsolete":false,"name":"unequal mitotic sister chromatid segregation following normal mitosis","synonyms":[{"name":"mitotic chromosome nondisjunction following normal mitosis","type":"exact"},{"name":"unequal mitotic chromosome segregation following normal mitosis","type":"exact"},{"name":"unequal mitotic sister chromatid segregation during vegetative growth following normal mitosis","type":"exact"},{"name":"unequal mitotic sister chromatid separation following normal mitosis","type":"related"},{"name":"unequal sister chromatid segregation following normal mitosis during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005069"}


id: PBO:0087412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 2 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; phosphorylated; transcription is regulated by Hap1p, Hap2p/Hap3p, and heme","termid":"PBO:0087412"}


id: PBO:0085908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; protein abundance increases in response to DNA replication stress","termid":"PBO:0085908"}


id: PBO:0054182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1556","termid":"PBO:0054182"}


id: GO:0034979
data:
  {"annotated_genes":["SJAG_01075","SJAG_04039","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91878,79118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[106101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[91879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[79119,116403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[79120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-acetyl-L-lysyl-[protein] + NAD+ + H2O = L-lysyl-[protein] + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group from a protein to NAD, producing nicotinamide.","definition_xrefs":["GOC:mah","GOC:BHF","RHEA:43636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacylase activity","termid":"GO:0141218"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"NAD-dependent protein lysine deacetylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9620532","Reactome:R-HSA-5211239","Reactome:R-HSA-5685953","EC:2.3.1.286","Reactome:R-HSA-5688294","Reactome:R-HSA-5688289","Reactome:R-HSA-3371467","Reactome:R-HSA-9667952","Reactome:R-HSA-9854463"],"synonyms":[{"name":"NAD(+)-dependent protein deacetylase","type":"exact"},{"name":"NAD(+)-dependent protein deacylase","type":"broad"},{"name":"NAD-dependent protein deacetylase activity","type":"broad"},{"name":"protein acetyllysine N-acetyltransferase","type":"broad"},{"name":"protein lysine deacetylase","type":"broad"},{"name":"protein lysine deacylase","type":"broad"}],"termid":"GO:0034979","terms_by_termid":{"GO:0032041":null,"GO:0046969":null,"GO:0046970":null,"GO:0140765":null,"GO:0141222":null}}


id: MONDO:0018117
data:
  {"annotated_genes":["SJAG_00404","SJAG_02885","SJAG_01356","SJAG_04178","SJAG_04110","SJAG_02305","SJAG_04323","SJAG_02119","SJAG_01918"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88455,88456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013760"},{"annotations":[86826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010155"},{"annotations":[87746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"},{"annotations":[88125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012787"},{"annotations":[88162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011246"},{"annotations":[88757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008086"},{"annotations":[88850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013337"},{"annotations":[87503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008922"},{"annotations":[88104,88105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_01356":null,"SJAG_01918":null,"SJAG_02119":null,"SJAG_02305":null,"SJAG_02885":null,"SJAG_04110":null,"SJAG_04178":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680990","MEDGEN:1843236","GARD:21516","Orphanet:352301"],"termid":"MONDO:0018117","terms_by_termid":{"MONDO:0008086":null,"MONDO:0008922":null,"MONDO:0010155":null,"MONDO:0011246":null,"MONDO:0012787":null,"MONDO:0013337":null,"MONDO:0013584":null,"MONDO:0013760":null,"MONDO:0014417":null},"xrefs":{"Monarch":{"xref_id":"0018117"}}}


id: GO:0160174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular developmental process by which the outer layer of the cell (the cortex) rotates relative to the inner cytoplasm.","definition_xrefs":["PMID:37983969","PMID:22949618","PMID:25077289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cortical rotation","termid":"GO:0160174"}


id: PBO:0088883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster transfer protein Fra3","termid":"PBO:0088883"}


id: PBO:0055777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lon peptidase 1, mitochondrial","termid":"PBO:0055777"}


id: MONDO:1010732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any severe combined immunodeficiency disease in pigs in which the cause of the disease is a mutation in the IL2RG gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency disease, non-human animal","termid":"MONDO:1011422"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked severe combined immunodeficiency disease, IL2RG-related, pig","secondary_identifiers":["OMIA:000899-9823"],"termid":"MONDO:1010732","xrefs":{"Monarch":{"xref_id":"1010732"}}}


id: FYPO:0005739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation results in the division of chromosomes into two distinct unequal masses containing unseparated sister chromatids, located at or near the ends of an elongated mitotic spindle.","definition_xrefs":["PomBase:vw","PMID:11792803","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complete but unequal mitotic sister chromatid segregation","termid":"FYPO:0001270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0001320","FYPO:0000337","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"complete but unequal mitotic sister chromatid segregation with unseparated chromosomes","termid":"FYPO:0005739"}


id: PBO:0011095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs/CORVET complex subunit Pep5/Vps11 (predicted)","termid":"PBO:0011095"}


id: PBO:0050430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 1","termid":"PBO:0050430"}


id: MOD:01639
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-histidine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-histidine removal","termid":"MOD:01639"}


id: SO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons TAT and TAC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine","synonyms":[{"name":"Tyr","type":"exact"},{"name":"Y","type":"exact"}],"termid":"SO:0001446"}


id: PBO:0039525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 6","termid":"PBO:0039525"}


id: PBO:0062391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 12 pseudogene","termid":"PBO:0062391"}


id: PBO:0053049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 7, transcriptional regulator","termid":"PBO:0053049"}


id: PBO:0041519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 46","termid":"PBO:0041519"}


id: GO:0015051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of X-opioid receptors.","definition_xrefs":["InterPro:IPR001420"],"gene_count":0,"genotype_count":0,"name":"obsolete X-opioid receptor activity (obsolete GO:0015051)","synonyms":[{"name":"X-opioid receptor activity","type":"exact"}],"termid":"GO:0015051"}


id: PBO:0069537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 807, pseudogene","termid":"PBO:0069537"}


id: PATO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is 180 degrees to another entity.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"straight angle to","termid":"PATO:0001322"}


id: PBO:0055825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LPS responsive beige-like anchor protein","termid":"PBO:0055825"}


id: SO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exon whereby at least one base is part of a codon (here, 'codon' is inclusive of the stop_codon).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_exon","synonyms":[{"name":"coding exon","type":"exact"}],"termid":"SO:0000195"}


id: MONDO:0016392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebellar hypoplasia-tapetoretinal degeneration syndrome is a rare syndrome with a cerebellar malformation as a major feature characterized by cerebellar hypoplasia, bilateral retinal pigmentary changes, intellectual disability that can range from mild to moderate and pronounced language development delay. It presents with early developmental delay, central and peripheral non-progressive visual impairment or asymptomatic retinal changes, hypotonia, non-progressive ataxia and nystagmus.","definition_xrefs":["Orphanet:2246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar hypoplasia-tapetoretinal degeneration syndrome","secondary_identifiers":["MEDGEN:902621","DOID:0070339","UMLS:C4275139","GARD:1196"],"synonyms":[{"name":"cerebellar hypoplasia tapetoretinal degeneration","type":"related"}],"termid":"MONDO:0016392","xrefs":{"Monarch":{"xref_id":"0016392"}}}


id: PBO:0071769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 2","termid":"PBO:0071769"}


id: MOD:00828
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tryptophan residue and an L-cysteine residue by a thioester bond to form S-(L-tryptophanyl)-L-cysteine.","definition_xrefs":["PubMed:16030216","RESID:AA0417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-tryptophanyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-3-(1H-indol-3-yl)propanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Tryptophanyl cysteine thioester (Cys-Trp)","type":"exact"},{"name":"S-(L-tryptophanyl)-L-cysteine","type":"exact"},{"name":"S-[2-amino-3-(1H-indol-3-yl)propanoyl]cysteine","type":"exact"},{"name":"XLNK1TrpSCys","type":"exact"},{"name":"tryptophan cysteine thioester","type":"exact"}],"termid":"MOD:00828"}


id: PBO:0030224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_morphology_during_vegetative_growth","termid":"PBO:0030224"}


id: PBO:0109013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 14, pseudogene","termid":"PBO:0109013"}


id: PBO:0075974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroidogenic acute regulatory protein pseudogene 1","termid":"PBO:0075974"}


id: PBO:0054802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2215","termid":"PBO:0054802"}


id: PBO:0067034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 48, pseudogene","termid":"PBO:0067034"}


id: PBO:0031839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_shmoo_morphology","termid":"PBO:0031839"}


id: MONDO:0025369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An arbovirus infection of sheep and goats transmitted by ticks. It is characterized by high fever and hemorrhagic gastroenteritis.","definition_xrefs":["MESH:D009265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"tick-borne infectious disease, non-human animal","termid":"MONDO:0700201"},{"relation_name":"is_a","term_name":"Bunyaviridae infectious disease, non-human animal","termid":"MONDO:0700202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nairobi sheep disease","secondary_identifiers":["SCTID:24069003"],"synonyms":[{"name":"disease, Nairobi sheep","type":"related"},{"name":"sheep disease, Nairobi","type":"related"}],"termid":"MONDO:0025369","xrefs":{"Monarch":{"xref_id":"0025369"}}}


id: GO:0060102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen and cuticulin-based noncellular, multilayered structure that is synthesized by an underlying ectodermal (hypodermal) cell layer. The cuticle serves essential functions in body morphology, locomotion, and environmental protection. An example of this component is found in Caenorhabditis elegans.","definition_xrefs":["GOC:dph","GOC:kmv","ISSN:15518507","PMID:12619137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specialized extracellular matrix","termid":"GO:0140047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cuticular extracellular matrix","synonyms":[{"name":"collagen and cuticulin-based cuticle extracellular matrix","type":"exact"},{"name":"collagen and cuticulin-based exoskeleton extracellular matrix","type":"related"},{"name":"cuticular ECM","type":"exact"}],"termid":"GO:0060102"}


id: PBO:0072594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radical S-adenosyl methionine domain containing 1","termid":"PBO:0072594"}


id: PBO:0063076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase beta","termid":"PBO:0063076"}


id: PBO:0059063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 3B","termid":"PBO:0059063"}


id: MONDO:0010021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign neonatal seizures","termid":"MONDO:0016027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial neonatal, autosomal recessive","secondary_identifiers":["GARD:15234","MEDGEN:338640","MESH:C564823","UMLS:C1849250","OMIM:269720"],"synonyms":[{"name":"Bfns, autosomal recessive","type":"related"},{"name":"autosomal dominant form of benign neonatal seizures","type":"related"},{"name":"convulsions benign familial neonatal dominant form","type":"related"},{"name":"convulsions, benign familial neonatal, autosomal recessive","type":"related"},{"name":"epilepsy, benign familial neonatal, autosomal recessive","type":"related"},{"name":"seizures, benign familial neonatal, autosomal recessive","type":"exact"}],"termid":"MONDO:0010021","xrefs":{"Monarch":{"xref_id":"0010021"}}}


id: GO:0062058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription factor TFIIH holo complex.","definition_xrefs":["PMID:11259578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"transcription factor TFIIH holo complex binding","termid":"GO:0062058"}


id: GO:0090312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of protein deacetylation, the removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:ecd","PMID:20027304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein deacetylation","termid":"GO:0090311"},{"relation_name":"positively_regulates","term_name":"protein deacetylation","termid":"GO:0006476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein deacetylation","synonyms":[{"name":"positive regulation of protein amino acid deacetylation","type":"exact"}],"termid":"GO:0090312"}


id: MONDO:1011257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any achromatopsia that occurs in cattle due to a mutation in the CNGB3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"achromatopsia, non-human animal","termid":"MONDO:1012578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achromatopsia, CNGB3-related, cattle","secondary_identifiers":["OMIA:001365-9913"],"synonyms":[{"name":"achromatopsia-3 CNGB3-related, cattle","type":"related"}],"termid":"MONDO:1011257","xrefs":{"Monarch":{"xref_id":"1011257"}}}


id: PBO:0066294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member V, pseudogene","termid":"PBO:0066294"}


id: MONDO:1012327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus with ventricular septal defect and patent foramen ovale, non-human animal","termid":"MONDO:1011646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent truncus arteriosus with ventricular septal defect and patent foramen ovale, cattle","secondary_identifiers":["OMIA:001218-9913"],"termid":"MONDO:1012327","xrefs":{"Monarch":{"xref_id":"1012327"}}}


id: GO:0009764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of C4 photosynthesis, as it occurs in plants in which the enzyme decarboxylating C4 acids in the bundle sheath is phosphoenolpyruvate carboxykinase (PEPCK).","definition_xrefs":["PMID:11788762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4 photosynthesis","termid":"GO:0009760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"PEP carboxykinase C4 photosynthesis","termid":"GO:0009764"}


id: GO:1905682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of innate immunity memory response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of innate immunity memory response","termid":"GO:1905680"},{"relation_name":"positively_regulates","term_name":"innate immunity memory response","termid":"GO:0090714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of innate immunity memory response","synonyms":[{"name":"activation of innate immunity memory response","type":"narrow"},{"name":"up regulation of innate immunity memory response","type":"exact"},{"name":"up-regulation of innate immunity memory response","type":"exact"},{"name":"upregulation of innate immunity memory response","type":"exact"}],"termid":"GO:1905682"}


id: GO:1905913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion export across the plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:22362515","GO_REF:0000058","GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"},{"relation_name":"is_a","term_name":"regulation of calcium ion export across plasma membrane","termid":"GO:1905912"},{"relation_name":"negatively_regulates","term_name":"calcium ion export across plasma membrane","termid":"GO:1990034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of calcium ion export across plasma membrane","synonyms":[{"name":"down regulation of calcium ion efflux from cell","type":"exact"},{"name":"down regulation of calcium ion export from cell","type":"exact"},{"name":"down-regulation of calcium ion efflux from cell","type":"exact"},{"name":"down-regulation of calcium ion export from cell","type":"exact"},{"name":"downregulation of calcium ion efflux from cell","type":"exact"},{"name":"downregulation of calcium ion export from cell","type":"exact"},{"name":"inhibition of calcium ion efflux from cell","type":"narrow"},{"name":"inhibition of calcium ion export from cell","type":"narrow"},{"name":"negative regulation of calcium ion efflux from cell","type":"exact"},{"name":"negative regulation of calcium ion export from cell","type":"exact"}],"termid":"GO:1905913"}


id: MONDO:0800042
data:
  {"annotated_genes":["SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89066],"is_not":false,"summary":null,"term":"MONDO:0800042"}]},"cv_name":"mondo","definition":"A restrictive dermopathy that has material basis in homozygous or compound heterozygous mutation in the ZMPSTE24 gene on chromosome 1p34.","definition_xrefs":["DOID:0070369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"},{"relation_name":"is_a","term_name":"restrictive dermopathy","termid":"MONDO:0031213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03396":null},"genotype_count":0,"is_obsolete":false,"name":"restrictive dermopathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1812447","UMLS:C5676878","OMIM:275210","MESH:C536920","SCTID:400128006"],"synonyms":[{"name":"fetal hypokinesia sequence due to restrictive dermopathy","type":"exact"},{"name":"foetal hypokinesia sequence due to restrictive dermopathy","type":"exact"},{"name":"hyperkeratosis-contracture syndrome","type":"exact"},{"name":"restrictive dermopathy","type":"broad"},{"name":"restrictive dermopathy 1, lethal","type":"exact"},{"name":"restrictive dermopathy, lethal","type":"related"},{"name":"tight skin contracture syndrome, lethal","type":"exact"}],"termid":"MONDO:0800042","terms_by_termid":{"MONDO:0800042":null},"xrefs":{"Monarch":{"xref_id":"0800042"}}}


id: MOD:01563
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01563"}


id: GO:0033060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deposition or aggregation of coloring matter in an ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus pigmentation","termid":"GO:0033060"}


id: MONDO:0800347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial hypertrophic, 23, with or without ventricular noncompaction","secondary_identifiers":["UMLS:C4225649","MEDGEN:897129"],"synonyms":[{"name":"CMH23","type":"exact"}],"termid":"MONDO:0800347","xrefs":{"Monarch":{"xref_id":"0800347"}}}


id: MONDO:0005836
data:
  {"annotated_genes":["SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89127,89126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the male reproductive system. Representative examples include prostate carcinoma, penile carcinoma, testicular seminoma, and testicular embryonal carcinoma.","definition_xrefs":["NCIT:C8561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"male reproductive system neoplasm","termid":"MONDO:0024582"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"male reproductive organ cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0007355","MESH:D005834","MEDGEN:102279","ICD9:187.8","SCTID:363515000","DOID:3856","UMLS:C0153606","ICD9:187.9"],"synonyms":[{"name":"cancer of male reproductive organ","type":"exact"},{"name":"male genital cancer","type":"exact"},{"name":"male genital neoplasm","type":"broad"},{"name":"male reproductive organ cancer","type":"exact"},{"name":"male reproductive system neoplasm","type":"broad"},{"name":"malignant Male reproductive system neoplasm","type":"exact"},{"name":"malignant Male reproductive system tumor","type":"exact"},{"name":"malignant Male reproductive system tumour","type":"exact"},{"name":"malignant male reproductive organ neoplasm","type":"exact"},{"name":"malignant neoplasm of Male reproductive system","type":"exact"},{"name":"malignant neoplasm of male genital organ","type":"exact"},{"name":"malignant neoplasm of male genital organ or tract","type":"exact"},{"name":"malignant neoplasm of male genital organ, site unspecified","type":"exact"},{"name":"malignant neoplasm of male genital organs","type":"exact"},{"name":"malignant neoplasm of male reproductive organ","type":"exact"},{"name":"malignant neoplasm of the Male reproductive system","type":"exact"},{"name":"malignant tumor of Male reproductive system","type":"exact"},{"name":"malignant tumor of male genital organ","type":"exact"},{"name":"malignant tumor of male reproductive system","type":"exact"},{"name":"malignant tumor of the Male reproductive system","type":"exact"},{"name":"malignant tumour of Male reproductive system","type":"exact"},{"name":"malignant tumour of male genital organ","type":"exact"},{"name":"malignant tumour of male reproductive system","type":"exact"},{"name":"malignant tumour of the Male reproductive system","type":"exact"},{"name":"neoplasm of male genital organ","type":"broad"},{"name":"tumor of male reproductive system","type":"broad"},{"name":"tumour of male reproductive system","type":"broad"}],"termid":"MONDO:0005836","terms_by_termid":{"MONDO:0013872":null},"xrefs":{"Monarch":{"xref_id":"0005836"}}}


id: MONDO:0009472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylation, slow","secondary_identifiers":["OMIM:243400","UMLS:C0878587","MEDGEN:164207"],"synonyms":[{"name":"Fast acetylator phenotype","type":"related"},{"name":"INH inactivation, Fast","type":"related"},{"name":"INH inactivation, slow","type":"related"},{"name":"Isoniazid inactivation, slow","type":"related"},{"name":"acetylation, Fast","type":"related"},{"name":"acetylation, slow","type":"exact"},{"name":"slow acetylator phenotype","type":"related"}],"termid":"MONDO:0009472","xrefs":{"Monarch":{"xref_id":"0009472"}}}


id: PATO:0000660
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000660 angle_quantity (obsolete PATO:0000660)","termid":"PATO:0000660"}


id: PBO:0090015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase Plb2","termid":"PBO:0090015"}


id: GO:0031249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a denatured protein.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"denatured protein binding","termid":"GO:0031249"}


id: PBO:0048119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUS RNA binding protein","termid":"PBO:0048119"}


id: MONDO:1011793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive myopathy, non-human animal","secondary_identifiers":["OMIA:000829"],"termid":"MONDO:1011793","xrefs":{"Monarch":{"xref_id":"1011793"}}}


id: MONDO:1010035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mandibulofacial dysostosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mandibulofacial dysostosis, non-human animal","secondary_identifiers":["OMIA:002288"],"termid":"MONDO:1010035","xrefs":{"Monarch":{"xref_id":"1010035"}}}


id: FYPO:0002773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell undergoes an abnormal nuclear division after meiosis II is complete.","definition_xrefs":["PMID:23628763","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"third meiotic division","synonyms":[{"name":"meiosis III","type":"related"},{"name":"meiosis termination defect","type":"exact"},{"name":"third meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002773"}


id: GO:0120136
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120029],"is_not":false,"summary":null,"term":"GO:0120136"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dUMP = ADP + dUDP.","definition_xrefs":["PMID:3010881","RHEA:30655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside phosphate kinase activity, ATP as phosphate donor","termid":"GO:0047507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dUMP kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP:dUMP phosphotransferase activity","type":"exact"},{"name":"dUMP-kinase activity","type":"exact"},{"name":"deoxyuridine monophosphate kinase activity","type":"exact"}],"termid":"GO:0120136","terms_by_termid":{"GO:0120136":null}}


id: PBO:0067576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 733, pseudogene","termid":"PBO:0067576"}


id: PBO:0030456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tacrolimus_during_salt_stress","termid":"PBO:0030456"}


id: PBO:0077382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 123","termid":"PBO:0077382"}


id: FYPO:0001531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of GTPase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal GTPase activity","termid":"FYPO:0001530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased GTPase activity","synonyms":[{"name":"reduced GTPase activity","type":"exact"}],"termid":"FYPO:0001531"}


id: PBO:0034454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomerase_holoenzyme_complex_assembly","termid":"PBO:0034454"}


id: PBO:0061514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 4","termid":"PBO:0061514"}


id: PATO:0000077
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the whether the bearer's disposition to react to a stimulus or an agent.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"response to","synonyms":[{"name":"responsivity","type":"related"}],"termid":"PATO:0000077"}


id: MONDO:0020422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortopulmonary coronary arterial course is a rare coronary artery congenital malformation characterized by anomalous origin of the coronary artery from the contralateral sinus of Valsalva with course between the aorta and the pulmonary artery. The anomaly is associated with increased risk of sudden cardiac death, especially during exercise.","definition_xrefs":["Orphanet:99086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortopulmonary coronary arterial course","secondary_identifiers":["MEDGEN:1668023","UMLS:C4757971"],"termid":"MONDO:0020422","xrefs":{"Monarch":{"xref_id":"0020422"}}}


id: PBO:0075308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5","termid":"PBO:0075308"}


id: GO:0009345
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric enzyme complex which, in bacteria, is usually a tetramer of two alpha and two beta chains and in eukaryotes, is usually a homodimer. Functions in the ligation of glycine and tRNA(Gly) to form glycyl-tRNA(Gly).","definition_xrefs":["PMID:15733854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"glycine-tRNA ligase complex","synonyms":[{"name":"glycine-tRNA synthetase complex","type":"exact"}],"termid":"GO:0009345"}


id: PR:O74400
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 28 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C4F6.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.14","secondary_identifiers":["UniProtKB:O74400"],"synonyms":[{"name":"Spom972h-RBM28","type":"exact"}],"termid":"PR:O74400"}


id: GO:0008263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of mismatched pyrimidine bases in DNA. Enzymes with this activity recognize and remove pyrimidines present in mismatches by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apyrimidinic (AP) site.","definition_xrefs":["PMID:9224623","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch base pair DNA N-glycosylase activity","termid":"GO:0000700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"pyrimidine-specific mismatch base pair DNA N-glycosylase activity","synonyms":[{"name":"G/T-mismatch-specific thymine-DNA glycosylase activity","type":"exact"}],"termid":"GO:0008263"}


id: GO:0090244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state that contributes to somitogenesis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway","termid":"GO:0016055"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Wnt signaling pathway involved in somitogenesis","synonyms":[{"name":"Wnt receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"Wnt receptor signalling","type":"exact"},{"name":"Wnt-activated signaling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:0090244"}


id: PBO:0067079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 111, pseudogene","termid":"PBO:0067079"}


id: MONDO:1012365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Laron dwarfism, non-human animal","termid":"MONDO:1011958"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laron dwarfism, cattle","secondary_identifiers":["OMIA:001323-9913"],"termid":"MONDO:1012365","xrefs":{"Monarch":{"xref_id":"1012365"}}}


id: PBO:0039964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 7","termid":"PBO:0039964"}


id: PBO:0085160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide excision repair (NER) protein; binds damaged DNA during NER; binds DNA in an ATP-dependent manner (with Rad16p) during NER; required for repair of non-transcribed chromatin; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex","termid":"PBO:0085160"}


id: PBO:0050699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 12B","termid":"PBO:0050699"}


id: MONDO:0013161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2O (LGMD2O) is a form of limb-girdle muscular dystrophy characterized by an onset in childhood or adolescence of rapidly progressive proximal limb muscle weakness (particularly affecting the neck, hip girdle, and shoulder abductors), hypertrophy in the calves and quadriceps, ankle contractures, and myopia.","definition_xrefs":["Orphanet:206564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type C","termid":"MONDO:0000173"},{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"myopathy caused by variation in POMGNT1","termid":"MONDO:0700068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066","MONDO:0005336","MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2O","secondary_identifiers":["DOID:0110292","UMLS:C3150417","MEDGEN:461767","GARD:12540","OMIM:613157"],"synonyms":[{"name":"LGMD-POMGNT1 related","type":"exact"},{"name":"LGMD2O","type":"exact"},{"name":"MDDGC3","type":"exact"},{"name":"POMGNT1 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in POMGNT1","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2O","type":"related"},{"name":"muscular dystrophy, limb-girdle, type 2O","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle) type C3","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 3","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy limb-girdle POMGNT1-related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy, limb-girdle, POMGNT1-related","type":"related"}],"termid":"MONDO:0013161","xrefs":{"Monarch":{"xref_id":"0013161"}}}


id: PBO:0064146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKNOX2 antisense RNA 1","termid":"PBO:0064146"}


id: PBO:0089645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glomulin, ubiquitin-protein transferase inhibitor Glm2","termid":"PBO:0089645"}


id: GO:0046302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"2-chloro-N-isopropylacetanilide metabolic process","termid":"GO:0018889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-chloro-N-isopropylacetanilide catabolic process","synonyms":[{"name":"2-chloro-N-isopropylacetanilide breakdown","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide catabolism","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide degradation","type":"exact"}],"termid":"GO:0046302"}


id: PBO:0083356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene NUM1/YDR150W; null mutation blocks anaerobic growth","termid":"PBO:0083356"}


id: PATO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"semi-fertile","termid":"PATO:0001767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male semi-fertile","termid":"PATO:0001761"}


id: GO:0004620
data:
  {"annotated_genes":["SJAG_02093","SJAG_02091","SJAG_02100","SJAG_03204","SJAG_04110","SJAG_04292","SJAG_01198","SJAG_00199","SJAG_02161","SJAG_00321","SJAG_01219","SJAG_01519","SJAG_04323"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77636,79853],"is_not":false,"summary":null,"term":"GO:0004620"},{"annotations":[95766,116038,72489,67316,65928,68970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[110769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[99645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[74500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[72839,79169,80343,78188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[76107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[63991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a glycerophospholipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_00321":null,"SJAG_01198":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_03204":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phospholipase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6786650","Reactome:R-HSA-6792445"],"termid":"GO:0004620","terms_by_termid":{"GO:0004435":null,"GO:0004620":null,"GO:0004622":null,"GO:0004623":null,"GO:0004630":null,"GO:0004767":null,"GO:0034479":null,"GO:0052714":null}}


id: GO:0014827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the intestine. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The intestine is the section of the alimentary canal from the stomach to the anal canal. It includes the large intestine and small intestine.","definition_xrefs":["GOC:mtg_muscle","MA:0001539","MSH:D007422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phasic smooth muscle contraction","termid":"GO:0014821"},{"relation_name":"is_a","term_name":"gastro-intestinal system smooth muscle contraction","termid":"GO:0014831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestine smooth muscle contraction","termid":"GO:0014827"}


id: PBO:0053848
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id: GO:0052578
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id: PBO:0089993
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id: PBO:0004295
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id: PBO:0053027
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id: MONDO:0016215
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id: PBO:0113110
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id: GO:0004076
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id: MOD:01399
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id: MONDO:0016943
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id: MONDO:0006025
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id: PBO:0085865
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id: FYPO:0004077
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id: GO:0002833
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id: PBO:0004512
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id: GO:0051464
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id: PBO:0005392
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id: GO:0006811
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id: GO:0080081
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id: GO:0043365
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id: GO:0009248
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id: PR:Q9USL5
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id: MONDO:0008753
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id: PBO:0064370
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id: GO:0005960
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id: MONDO:0024569
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id: GO:0080192
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id: MONDO:0022874
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id: MONDO:0007144
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id: MOD:00323
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysine methyl ester.","definition_xrefs":["PubMed:10973948","RESID:AA0318","PubMed:11875433","Unimod:34#C-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-lysine","termid":"MOD:01683"},{"relation_name":"is_a","term_name":"alpha-carboxyl methylated residue","termid":"MOD:01689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-lysine methyl ester","synonyms":[{"name":"2,6-diaminohexanoic methyl ester","type":"exact"},{"name":"L-lysine methyl ester","type":"exact"},{"name":"MOD_RES Lysine methyl ester","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"OMeLys","type":"exact"},{"name":"alpha,epsilon-diaminocaproic methyl ester","type":"exact"},{"name":"methyl (S)-2,6-diaminohexanoate","type":"exact"},{"name":"methyl L-lysinate","type":"exact"},{"name":"methyl esterified L-lysine","type":"exact"}],"termid":"MOD:00323"}


id: PBO:0013767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase ipp1 (predicted)","termid":"PBO:0013767"}


id: FYPO:0007736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is altered such that more of the protein is present at the 5' end, and less at the 3' end, than normal during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006020"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"protein displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"condensin displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"narrow"},{"name":"decreased protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during metaphase with increased localization towards 5' end","type":"exact"},{"name":"protein displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase during metaphase of mitotic cell cycle","type":"exact"},{"name":"protein displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase during vegetative growth","type":"exact"},{"name":"protein displaced from downstream end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007736"}


id: GO:1902223
data:
  {"annotated_genes":["SJAG_03312","SJAG_03124","SJAG_01455","SJAG_02505","SJAG_03167","SJAG_04652","SJAG_05007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100218,79711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[75208,75936,70043,79005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[78440,80532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of erythrose 4-phosphate/phosphoenolpyruvate family amino acid.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process","termid":"GO:1902221"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03124":null,"SJAG_03167":null,"SJAG_03312":null,"SJAG_04652":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid anabolism","type":"exact"},{"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthesis","type":"exact"},{"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid formation","type":"exact"},{"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid synthesis","type":"exact"}],"termid":"GO:1902223","terms_by_termid":{"GO:0000162":null,"GO:0006571":null,"GO:0009094":null}}


id: GO:0140339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to phosphatidylglycerol and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["PMID:9132017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0120013","GO:0005215"],"is_obsolete":false,"name":"phosphatidylglycerol transfer activity","synonyms":[{"name":"phosphatidylglycerol carrier activity","type":"exact"}],"termid":"GO:0140339"}


id: FYPO:0008364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 trimethylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0008364"}


id: GO:0006383
data:
  {"annotated_genes":["SJAG_00731","SJAG_00619","SJAG_01444","SJAG_00421","SJAG_03761","SJAG_01827","SJAG_03035","SJAG_00637","SJAG_05339","SJAG_03689","SJAG_03931","SJAG_04261","SJAG_02101","SJAG_01313","SJAG_00585","SJAG_02815","SJAG_00142","SJAG_03181","SJAG_02070","SJAG_03120","SJAG_00067","SJAG_02242","SJAG_03546","SJAG_04161","SJAG_02898","SJAG_01765","SJAG_03007","SJAG_04408","SJAG_03354","SJAG_02600","SJAG_03921","SJAG_04934"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62774,64012,64173,71840,103404,105241,107715,114618,118750],"is_not":false,"summary":null,"term":"GO:0006383"},{"annotations":[75498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042791"},{"annotations":[75543],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0016480"},{"annotations":[77791,79889],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006359"},{"annotations":[104971,73557],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070898"},{"annotations":[117972,57092,61794,101770],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006386"},{"annotations":[56973,81601,90737,75500,90000,108854,97441,117346,72871],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006384"},{"annotations":[76945,78307,73037,78730,81460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042797"}]},"cv_name":"biological_process","definition":"The synthesis of RNA from a DNA template by RNA polymerase III, originating at an RNAP III promoter.","definition_xrefs":["GOC:txnOH","GOC:jl","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00142":null,"SJAG_00421":null,"SJAG_00585":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01765":null,"SJAG_01827":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02242":null,"SJAG_02600":null,"SJAG_02815":null,"SJAG_02898":null,"SJAG_03007":null,"SJAG_03035":null,"SJAG_03120":null,"SJAG_03181":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_03689":null,"SJAG_03761":null,"SJAG_03921":null,"SJAG_03931":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04934":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0001041","Reactome:R-HSA-74158","GO:0001009","GO:0001035"],"synonyms":[{"name":"RNA polymerase III transcription factor activity","type":"related"},{"name":"U2 snRNA transcription (S. cerevisiae)","type":"narrow"},{"name":"U6 snRNA transcription (mammalian)","type":"narrow"},{"name":"transcription from Pol III promoter","type":"exact"},{"name":"transcription from RNA polymerase III promoter","type":"exact"},{"name":"transcription from RNA polymerase III type 2 promoter","type":"narrow"},{"name":"transcription from RNA polymerase III type 3 promoter","type":"narrow"},{"name":"transcription from a RNA polymerase III hybrid type promoter","type":"narrow"}],"termid":"GO:0006383","terms_by_termid":{"GO:0006359":null,"GO:0006383":null,"GO:0006384":null,"GO:0006386":null,"GO:0016480":null,"GO:0042791":null,"GO:0042797":null,"GO:0070898":null}}


id: MONDO:0019726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type II mixed cryoglobulinemia, a relatively rare clinico-serological subtype of mixed cryoglobulinemia (MC), is an immune complex disorder characterized by purpura, weakness and arthralgia and defined immunochemically by cryoglobulins composed of polyclonal IgGs (autoantigens) and monoclonal IgM (autoantibody).","definition_xrefs":["Orphanet:93554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cryoglobulinemic vasculitis","termid":"MONDO:0007407"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type II mixed cryoglobulinemia","secondary_identifiers":["GARD:19220","UMLS:C5680264","MEDGEN:1842376","ICD10CM:D89.1"],"synonyms":[{"name":"MC type II","type":"exact"}],"termid":"MONDO:0019726","xrefs":{"Monarch":{"xref_id":"0019726"}}}


id: PBO:0076106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 11","termid":"PBO:0076106"}


id: PBO:0069123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 373, pseudogene","termid":"PBO:0069123"}


id: PBO:0042051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 110","termid":"PBO:0042051"}


id: PATO:0001046
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to resist to a stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"resistance to","synonyms":[{"name":"resistance","type":"exact"}],"termid":"PATO:0001046"}


id: PR:Q9USZ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transportin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02991","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11G11.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.07","secondary_identifiers":["UniProtKB:Q9USZ2"],"synonyms":[{"name":"Spom972h-TNPO3","type":"exact"}],"termid":"PR:Q9USZ2"}


id: MONDO:0008700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acheiropodia is an extremely rare developmental disorder characterized by bilateral, congenital and complete amputation of the distal extremities (amputation of distal epiphysis of the humerus, distal portion of the tibial diaphysis, aplasia of the radius, ulna, fibula) and aplasia of hands and feet (aplasia of carpal, metacarpal, tarsal, metatarsal and phalangeal bones). Rarely, an ectopic bone can be found at the distal end of the humerus. No other systemic manifestations have been reported and the disorder follows an autosomal recessive pattern of inheritance.","definition_xrefs":["Orphanet:931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acheiropody","secondary_identifiers":["OMIM:200500","SCTID:177504007","GARD:376","UMLS:C0265559","MEDGEN:120547","DOID:0050603","MESH:C536014"],"synonyms":[{"name":"ACHP","type":"related"},{"name":"acheiropodia","type":"exact"},{"name":"acheiropody","type":"exact"},{"name":"acheiropody, Brazilian type","type":"related"},{"name":"horn-Kolb syndrome","type":"exact"}],"termid":"MONDO:0008700","xrefs":{"Monarch":{"xref_id":"0008700"}}}


id: GO:1903085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sinapate ester biosynthesis.","definition_xrefs":["GOC:TermGenie","PMID:11080161","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"sinapate ester biosynthetic process","termid":"GO:0033525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of sinapate ester biosynthetic process","synonyms":[{"name":"regulation of sinapate ester anabolism","type":"exact"},{"name":"regulation of sinapate ester biosynthesis","type":"exact"},{"name":"regulation of sinapate ester formation","type":"exact"},{"name":"regulation of sinapate ester synthesis","type":"exact"}],"termid":"GO:1903085"}


id: SO:0000708
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A trans_splicing_acceptor_site which appends the 22nt SL1 RNA leader sequence to the 5' end of most mRNAs.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_acceptor_site","termid":"SO:0000706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL1_acceptor_site","synonyms":[{"name":"SL1 acceptor site","type":"exact"}],"termid":"SO:0000708"}


id: GO:0034154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 7.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 7 signaling pathway","synonyms":[{"name":"TLR7 signaling pathway","type":"exact"},{"name":"toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034154"}


id: GO:1904613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2,3,7,8-tetrachlorodibenzodioxine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23196670","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to 2,3,7,8-tetrachlorodibenzodioxine","termid":"GO:1904612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 2,3,7,8-tetrachlorodibenzodioxine","synonyms":[{"name":"cellular response to TCDD","type":"exact"},{"name":"cellular response to dioxin","type":"exact"}],"termid":"GO:1904613"}


id: GO:0046854
data:
  {"annotated_genes":["SJAG_01571","SJAG_05330","SJAG_00114","SJAG_00296","SJAG_03170","SJAG_01863","SJAG_04930","SJAG_03131","SJAG_00053","SJAG_00063","SJAG_02289","SJAG_04545","SJAG_02613","SJAG_04537"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93051,95066,98570,113094,113219,120475],"is_not":false,"summary":null,"term":"GO:0046854"},{"annotations":[93682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[92236,59688],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[63997,73307,62252,62386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[119523],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol phosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00063":null,"SJAG_00114":null,"SJAG_00296":null,"SJAG_01571":null,"SJAG_01863":null,"SJAG_02289":null,"SJAG_02613":null,"SJAG_03131":null,"SJAG_03170":null,"SJAG_04537":null,"SJAG_04545":null,"SJAG_04930":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0046837"],"synonyms":[{"name":"PIP biosynthesis","type":"exact"},{"name":"PtdInsP biosynthesis","type":"exact"},{"name":"phosphatidylinositol phosphate biosynthesis","type":"exact"},{"name":"phosphatidylinositol phosphate phosphorylation","type":"narrow"},{"name":"phosphatidylinositol phosphorylation","type":"related"},{"name":"phosphoinositide phosphorylation","type":"narrow"}],"termid":"GO:0046854","terms_by_termid":{"GO:0036092":null,"GO:0046854":null,"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: PBO:0111814
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human retinoblastoma binding protein 2-like family","termid":"PBO:0111814"}


id: GO:1904002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sebum secreting cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:16901790","GO_REF:0000058","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"sebum secreting cell proliferation","termid":"GO:1990654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sebum secreting cell proliferation","synonyms":[{"name":"regulation of sebocyte proliferation","type":"related"}],"termid":"GO:1904002"}


id: MONDO:1010087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatomyositis characterized by the presence of anti-TIF1 autoantibodies.","definition_xrefs":["PMID:31279808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336"],"is_obsolete":false,"name":"anti-TIF1 dermatomyositis","synonyms":[{"name":"anti-transcription intermediary factor 1 complex dermatomyositis","type":"exact"}],"termid":"MONDO:1010087","xrefs":{"Monarch":{"xref_id":"1010087"}}}


id: PBO:0052059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl-tRNA synthetase 1 pseudogene 3","termid":"PBO:0052059"}


id: MONDO:0800183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any eye disorder in which the cause of the disease is a mutation in the PAX6 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"eye carcinoma","termid":"MONDO:0002466"},{"relation_name":"is_a","term_name":"hereditary renal cell carcinoma","termid":"MONDO:0003008"},{"relation_name":"is_a","term_name":"SMARCB1-deficient kidney medullary carcinoma","termid":"MONDO:0100534"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"PAX6-related ocular dysgenesis","termid":"MONDO:0800183","xrefs":{"Monarch":{"xref_id":"0800183"}}}


id: GO:0008926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + NAD+ = D-fructose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannitol-1-phosphate 5-dehydrogenase activity","secondary_identifiers":["MetaCyc:MANNPDEHYDROG-RXN","RHEA:19661"],"termid":"GO:0008926"}


id: MONDO:1012893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in dogs due to a mutation in the KRT1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, dog","termid":"MONDO:1012978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, KRT1-related, dog","secondary_identifiers":["OMIA:002425-9615"],"synonyms":[{"name":"non-epidermolytic ichthyosis, dog","type":"related"}],"termid":"MONDO:1012893","xrefs":{"Monarch":{"xref_id":"1012893"}}}


id: MONDO:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atypical Mycobacteriosis, familial (obsolete MONDO:0000007)","termid":"MONDO:0000007","xrefs":{"Monarch":{"xref_id":"0000007"}}}


id: GO:0046883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"hormone secretion","termid":"GO:0046879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of hormone secretion","termid":"GO:0046883"}


id: PBO:0088640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved endomembrane protein, RGS domain, implicated in signal transduction, cell polarity, possibly via membrane tethering","termid":"PBO:0088640"}


id: PBO:0038803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM7 antisense RNA 2","termid":"PBO:0038803"}


id: PBO:0025544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC ubiquitin conjugating enzyme E2, Ubc11/UbcP4","termid":"PBO:0025544"}


id: MONDO:0015285
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88131,88130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012137"}]},"cv_name":"mondo","definition":"Carney complex (CNC) is characterized by spotty skin pigmentation, endocrine overactivity and myxomas.","definition_xrefs":["Orphanet:1359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Carney complex","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:D44.8","GARD:1119","NANDO:1200756","SCTID:733491005","NCIT:C4705","DOID:0050471","MESH:D056733","icd11.foundation:1051158630","MEDGEN:140810","UMLS:C0406810"],"synonyms":[{"name":"CNC","type":"exact"},{"name":"Carney Complex, type 1","type":"narrow"},{"name":"Carney Complex, type 2","type":"narrow"},{"name":"Carney complex","type":"exact"},{"name":"Carney syndrome","type":"exact"},{"name":"Carney's syndrome","type":"exact"},{"name":"LAMB","type":"exact"},{"name":"Myxoma - spotty pigmentation - endocrine overactivity","type":"related"},{"name":"Myxoma-spotty pigmentation-endocrine overactivity syndrome","type":"exact"},{"name":"NAME syndrome","type":"exact"},{"name":"atrial myxoma with lentigines","type":"exact"},{"name":"lamb","type":"exact"},{"name":"lamb syndrome","type":"exact"},{"name":"lentigines, atrial myxoma, mucocutaneous myoma, blue Nevus syndrome","type":"exact"},{"name":"nevi, atrial myxoma, skin myxoma, ephelides syndrome","type":"exact"}],"termid":"MONDO:0015285","terms_by_termid":{"MONDO:0012137":null},"xrefs":{"Monarch":{"xref_id":"0015285"}}}


id: GO:0045750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of S phase of mitotic cell cycle activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of S phase of mitotic cell cycle (obsolete GO:0045750)","synonyms":[{"name":"activation of S phase of mitotic cell cycle","type":"narrow"},{"name":"positive regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"positive regulation of S-phase of mitotic cell cycle","type":"exact"},{"name":"stimulation of S phase of mitotic cell cycle","type":"narrow"},{"name":"up regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"up-regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"upregulation of S phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0045750"}


id: PBO:0028960
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-galactose_absent_from_glycoprotein_glycan","termid":"PBO:0028960"}


id: GO:0061159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of bipolar intracellular organization or cell growth patterns that contribute to cell morphogenesis. Bipolar organization is the organization that is a mirror image along an axis from a plane.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"},{"relation_name":"part_of","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of bipolar cell polarity involved in cell morphogenesis","termid":"GO:0061159"}


id: PBO:0113345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for 25S rRNA maturation and 60S ribosomal subunit assembly; localizes to the nucleolus and in foci along nuclear periphery; constituent of 66S pre-ribosomal particles; cooperates with Rrs1p and Mps3p to mediate telomere clustering by binding Sir4p, but is not involved in telomere tethering","termid":"PBO:0113345"}


id: MONDO:0004922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an impairment in the development of an individual's motor coordination skills; this impairment in motor development is not due to a medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental coordination disorder","secondary_identifiers":["NCIT:C92561","MESH:D019957","ICD9:315.4","SCTID:27544004","MEDGEN:41511","DOID:9923","UMLS:C0011757"],"synonyms":[{"name":"clumsy child syndrome","type":"exact"},{"name":"development coordination disorder","type":"exact"},{"name":"developmental dyspraxia","type":"exact"}],"termid":"MONDO:0004922","xrefs":{"Monarch":{"xref_id":"0004922"}}}


id: MONDO:0019420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability, Pai type is characterized by the association of dysmorphism with intellectual deficit. It has been described in four generations of one family. Premature death was reported in the affected males. Transmission is X-linked recessive and the causative gene has been localized to the q28 region of the X chromosome.","definition_xrefs":["Orphanet:85322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability, Pai type","secondary_identifiers":["GARD:19056","MEDGEN:930695","SCTID:719011002","UMLS:C4305026"],"termid":"MONDO:0019420","xrefs":{"Monarch":{"xref_id":"0019420"}}}


id: GO:0070678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a preprotein, the unprocessed form of a protein destined to undergo co- or post-translational processing.","definition_xrefs":["GOC:imk","GOC:mah","PMID:12914940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"preprotein binding","synonyms":[{"name":"unprocessed protein binding","type":"exact"}],"termid":"GO:0070678"}


id: MONDO:0020502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Yellow fever (YF), caused by YF virus, is a zoonotic disease characterized by fever and constitutional symptoms, with the potential to progress to severe and fatal viral hemorrhagic fever with shock and multi-organ system failure.","definition_xrefs":["Orphanet:99829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"arbovirus fever","termid":"MONDO:0018093"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow fever","secondary_identifiers":["ICD9:060.9","GARD:7914","MedDRA:10048240","NORD:1873","DOID:9682","ICD9:060","MEDGEN:53112","UMLS:C0043395","NCIT:C35547","MESH:D015004","icd11.foundation:383352795"],"synonyms":[{"name":"YF","type":"exact"},{"name":"Yellow Jack","type":"exact"},{"name":"Yellow fever Virus infection","type":"exact"},{"name":"Yellow fever virus caused disease or disorder","type":"exact"},{"name":"Yellow fever virus disease or disorder","type":"exact"},{"name":"Yellow fever virus infectious disease","type":"exact"},{"name":"Yellow fever, sylvan","type":"exact"},{"name":"bronze John","type":"exact"},{"name":"jungle yellow fever","type":"exact"},{"name":"sylvatic yellow fever","type":"exact"},{"name":"urban yellow fever","type":"exact"}],"termid":"MONDO:0020502","xrefs":{"Monarch":{"xref_id":"0020502"}}}


id: MONDO:1011448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi syndrome, non-human animal","secondary_identifiers":["OMIA:000366"],"termid":"MONDO:1011448","xrefs":{"Monarch":{"xref_id":"1011448"}}}


id: PBO:0042157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 18","termid":"PBO:0042157"}


id: GO:0051764
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91148],"is_not":false,"summary":null,"term":"GO:0051764"}]},"cv_name":"biological_process","definition":"The process in which two or more actin filaments are connected together by proteins that act as crosslinks between the filaments. The crosslinked filaments may be on the same or differing axes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"actin crosslink formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin bundling","type":"related"},{"name":"actin crosslinking","type":"exact"},{"name":"bridging actin filaments","type":"narrow"},{"name":"formation of actin crosslink","type":"exact"}],"termid":"GO:0051764","terms_by_termid":{"GO:0051764":null}}


id: MONDO:0018295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with deafness as a major feature (obsolete MONDO:0018295)","secondary_identifiers":["Orphanet:371212"],"synonyms":[{"name":"CDG with deafness as a major feature","type":"exact"}],"termid":"MONDO:0018295","xrefs":{"Monarch":{"xref_id":"0018295"}}}


id: GO:1901801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,5-anhydro-D-fructose.","definition_xrefs":["PMID:15716041","MetaCyc:PWY-6992","GOC:yaf","UniPathway:UPA00738","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose metabolic process","synonyms":[{"name":"1,5-anhydro-D-fructose metabolism","type":"exact"}],"termid":"GO:1901801"}


id: MONDO:0014325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pachyonychia congenita in which the cause of the disease is a mutation in the KRT6B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pachyonychia congenita","termid":"MONDO:0016471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita 4","secondary_identifiers":["MEDGEN:811524","OMIM:615728","GARD:16006","UMLS:C3714949"],"synonyms":[{"name":"KRT6B pachyonychia congenita","type":"exact"},{"name":"PC4","type":"related"},{"name":"pachyonychia congenita 4","type":"exact"},{"name":"pachyonychia congenita caused by mutation in KRT6B","type":"exact"},{"name":"pachyonychia congenita type 4","type":"exact"}],"termid":"MONDO:0014325","xrefs":{"Monarch":{"xref_id":"0014325"}}}


id: PBO:0056030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte specific transcript 1","termid":"PBO:0056030"}


id: GO:0046981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of N-acetylglucosamine (GlcNAc) in a beta-1,3 linkage to the mannose(beta-1,4)Glc disaccharide core of glycolipids.","definition_xrefs":["GOC:bf","PMID:12130651","PMID:12130631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase activity","synonyms":[{"name":"UDP-N-acetylglucosamine:beta-D-mannosyl-glycolipid beta-1,3-N-acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0046981"}


id: PBO:0035724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_HSE_promoter","termid":"PBO:0035724"}


id: MONDO:0015627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple epiphyseal dysplasia due to collagen 9 anomaly is a rare primary bone dysplasia disorder characterized by normal or mild short stature, early-onset pain and/or stiffness of the joints (mainly affecting knees but also elbows, wrists, ankles and fingers, with relative sparing of the hips) and early degenerative joint disease. Other skeletal anomalies (incl. varus or valgus deformities, osteochondritis dissecans, abnormal carpal shape, free articular bodies) and mild myopathy have also been reported.","definition_xrefs":["Orphanet:166002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagenopathy","termid":"MONDO:0004603"},{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia due to collagen 9 anomaly","secondary_identifiers":["DOID:0070305","MEDGEN:1647610","icd11.foundation:741183905","NANDO:2201016","SCTID:766717008","UMLS:C4707798","GARD:15024","ICD10CM:Q77.3"],"termid":"MONDO:0015627","xrefs":{"Monarch":{"xref_id":"0015627"}}}


id: GO:0140168
data:
  {"annotated_genes":["SJAG_01761","SJAG_03901"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97895,117096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015030"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein granule located in the nucleus.","definition_xrefs":["PMID:37890457","PMID:35355287","PMID:32475683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"},{"relation_name":"is_a","term_name":"ribonucleoprotein granule","termid":"GO:0035770"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01761":null,"SJAG_03901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"nuclear ribonucleoprotein granule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear RNA granule","type":"narrow"},{"name":"nuclear RNP granule","type":"exact"}],"termid":"GO:0140168","terms_by_termid":{"GO:0015030":null}}


id: PBO:0071643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 7","termid":"PBO:0071643"}


id: GO:0099614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported, tethered to or otherwise maintained in a spore cell wall.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to spore cell wall","synonyms":[{"name":"protein targeting to spore cell wall","type":"related"}],"termid":"GO:0099614"}


id: PBO:0080351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 3, pseudogene","termid":"PBO:0080351"}


id: PBO:0088841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin Phb2","termid":"PBO:0088841"}


id: PBO:0005237
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distinct from protein kinase C pathway and osmosensing MAP-kinase pathway","termid":"PBO:0005237"}


id: GO:0016797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end to yield 3' phosphomonoesters.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters (obsolete GO:0016797)","termid":"GO:0016797"}


id: GO:0043133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the hindgut. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The hindgut is the posterior part of the alimentary canal, including the rectum, and the large intestine.","definition_xrefs":["UBERON:0001046","GOC:jl","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindgut contraction","termid":"GO:0043133"}


id: PBO:0059340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS9 antisense RNA 2","termid":"PBO:0059340"}


id: PR:O59671
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof4 gene.","definition_xrefs":["UniProtKB:O59671","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.08","synonyms":[{"name":"Spom972h-pof4","type":"exact"},{"name":"protein pof4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59671"}


id: PATO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's behavior aggregate of the responses or reactions or movements in a given situation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioral quality","secondary_identifiers":["PATO:0001722"],"synonyms":[{"name":"behavioural quality","type":"exact"}],"termid":"PATO:0000186"}


id: GO:0009500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dicluster bacterial-type ferredoxin (obsolete GO:0009500)","synonyms":[{"name":"dicluster bacterial-type ferredoxin","type":"exact"}],"termid":"GO:0009500"}


id: PBO:0055169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2593","termid":"PBO:0055169"}


id: GO:0072303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of metanephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"},{"relation_name":"is_a","term_name":"regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072301"},{"relation_name":"positively_regulates","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular metanephric mesangial cell proliferation","termid":"GO:0072303"}


id: PR:O74330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S27-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11594:SF0","PRO:DNx","OMA:SCHPO02489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.10","secondary_identifiers":["UniProtKB:O74330"],"synonyms":[{"name":"Spom972h-RPS27L","type":"exact"}],"termid":"PR:O74330"}


id: PBO:0063272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 18 pseudogene","termid":"PBO:0063272"}


id: MONDO:0018959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Potassium-aggravated myotonia (PAM) is a muscular channelopathy presenting with a pure myotonia dramatically aggravated by potassium ingestion, with variable cold sensitivity and no episodic weakness. This group includes three forms: myotonia fluctuans, myotonia permanens, and acetazolamide-responsive myotonia.","definition_xrefs":["Orphanet:612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic syndrome","termid":"MONDO:0016120"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"},{"relation_name":"is_a","term_name":"SCN4A-related channelopathy","termid":"MONDO:0800468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium-aggravated myotonia","secondary_identifiers":["MEDGEN:444151","icd11.foundation:1707250468","MESH:C538353","UMLS:C2931826","NCIT:C122788","SCTID:702355008","GARD:4459","NANDO:1200500","OMIM:608390"],"synonyms":[{"name":"K+-aggravated myotonia","type":"exact"},{"name":"K-aggravated myotonia","type":"exact"},{"name":"Laryngospasm, Severe Neonatal Episodic","type":"related"},{"name":"MYOTONIA, POTASSIUM-AGGRAVATED","type":"related"},{"name":"Myotonia Congenita, Acetazolamide-Responsive","type":"related"},{"name":"Myotonia Congenita, Atypical","type":"related"},{"name":"Myotonia Fluctuans","type":"related"},{"name":"Myotonia Permanens","type":"related"},{"name":"PAM","type":"exact"},{"name":"Potassium aggravated myotonia","type":"exact"},{"name":"Sodium Channel Muscle Disease","type":"related"},{"name":"myotonia congenita, atypical, acetazolamide-responsive","type":"exact"}],"termid":"MONDO:0018959","xrefs":{"Monarch":{"xref_id":"0018959"}}}


id: GO:0023005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a neurotransmitter signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by neurotransmitter (obsolete GO:0023005)","synonyms":[{"name":"signal initiation by neurotransmitter","type":"exact"}],"termid":"GO:0023005"}


id: GO:0016540
data:
  {"annotated_genes":["SJAG_02902","SJAG_02980","SJAG_03524"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58428,62678,69790],"is_not":false,"summary":null,"term":"GO:0016540"}]},"cv_name":"biological_process","definition":"Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein.","definition_xrefs":["GOC:ai","PMID:9335337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"protein autoprocessing","references_by_uniquename":{"GO_REF:0000104":null},"termid":"GO:0016540","terms_by_termid":{"GO:0016540":null}}


id: MONDO:0007495
data:
  {"annotated_genes":["SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86877],"is_not":false,"summary":null,"term":"MONDO:0007495"}]},"cv_name":"mondo","definition":"An autosomal dominant dopa-responsive dystonia in which the cause of the disease is a variation in the GCH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP cyclohydrolase I deficiency","termid":"MONDO:0100184"},{"relation_name":"is_a","term_name":"autosomal dominant dopa-responsive dystonia","termid":"MONDO:0971063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0003441","MONDO:0004736"],"is_obsolete":false,"name":"dystonia 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9817","OMIM:128230","DOID:0090043","UMLS:C1851920","SCTID:715768000","MEDGEN:342121","NANDO:1200516"],"synonyms":[{"name":"DRD","type":"related"},{"name":"DYT-GCH1","type":"exact"},{"name":"Dopa-responsive dystonia, autosomal dominant","type":"exact"},{"name":"Dopa-responsive dystonia; Segawa syndrome AD","type":"related"},{"name":"GTP cyclohydrolase 1-deficient dopa-responsive dystonia","type":"exact"},{"name":"Segawa Syndrome","type":"exact"},{"name":"Segawa syndrome, autosomal dominant","type":"exact"},{"name":"dystonia 5","type":"exact"},{"name":"dystonia type 5","type":"exact"},{"name":"dystonia, DOPA-responsive","type":"related"},{"name":"dystonia, DOPA-responsive, with or without hyperphenylalaninemia","type":"exact"},{"name":"dystonia, Dopa-responsive, autosomal dominant","type":"exact"},{"name":"dystonia, progressive, with diurnal variation","type":"exact"},{"name":"dystonia-Parkinsonism with diurnal fluctuation","type":"exact"}],"termid":"MONDO:0007495","terms_by_termid":{"MONDO:0007495":null},"xrefs":{"Monarch":{"xref_id":"0007495"}}}


id: MONDO:0032735
data:
  {"annotated_genes":["SJAG_03581","SJAG_02645"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88923,88924],"is_not":false,"summary":null,"term":"MONDO:0032735"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02645":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 48","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16350","MEDGEN:1684457","UMLS:C5193082","OMIM:618415","DOID:0070354"],"synonyms":[{"name":"CATARACT 48","type":"related"},{"name":"CTRCT48","type":"related"}],"termid":"MONDO:0032735","terms_by_termid":{"MONDO:0032735":null},"xrefs":{"Monarch":{"xref_id":"0032735"}}}


id: PBO:0028146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleolus","termid":"PBO:0028146"}


id: PBO:0072224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 7","termid":"PBO:0072224"}


id: MONDO:0002422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade malignant neoplasm arising from the long bones. The tibia is the most frequently affected bone site. Patients present with swelling which may or may not be associated with pain. Morphologically, it is characterized by a biphasic pattern consisting of an epithelial and an osteofibrous component. The vast majority of cases recur if they are not treated with radical surgery. In a minority of cases the tumor may metastasize to other anatomic sites including lymph nodes, lungs, liver, brain, and skeleton.","definition_xrefs":["NCIT:C7644"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited syndrome with bone tumors as a major feature (obsolete MONDO:0015959)","termid":"MONDO:0015959"},{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adamantinoma","secondary_identifiers":["icd11.foundation:2013322169","ONCOTREE:ADMA","ICD10CM:C40.2","MESH:C562741","SCTID:307609003","ICDO:9261/3","DOID:2775","DOID:2776","Orphanet:55881","GARD:16660","ICD9:170.9","UMLS:C0334556","MESH:D050398","MEDGEN:83163","OMIM:102660"],"synonyms":[{"name":"Extragnathic adamantinoma","type":"exact"},{"name":"adamantinoma","type":"exact"},{"name":"adamantinoma of long bone","type":"related"},{"name":"adamantinoma of long bones","type":"exact"},{"name":"adamantinoma of long bones (morphologic abnormality)","type":"exact"},{"name":"adamantinoma, malignant","type":"exact"},{"name":"long bone adamantinoma","type":"exact"}],"termid":"MONDO:0002422","xrefs":{"Monarch":{"xref_id":"0002422"}}}


id: GO:0102598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-sandaracopimaradien-3-beta-ol + NADPH + H+ + O2 = oryzalexin D + NADP + H2O.","definition_xrefs":["EC:1.14.14.123","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3alpha-hydroxy-ent-sandaracopimardiene 7-beta-monooxygenase activity","secondary_identifiers":["RHEA:41472","MetaCyc:RXN-15382"],"termid":"GO:0102598"}


id: PR:O59707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36.10 gene.","definition_xrefs":["UniProtKB:O59707","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPS-like protein C36.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.10","synonyms":[{"name":"Spom972h-SPBC36.10","type":"exact"}],"termid":"PR:O59707"}


id: PBO:0036477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein subunit of SEA and Iml1 complexes Iml1 (predicted)","termid":"PBO:0036477"}


id: GO:0018647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene + O2 + NADH + H+ = H2O + NAD+ + phenanthrene-1,2-oxide.","definition_xrefs":["UM-BBD_enzymeID:e0333","PMID:1599252"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene 1,2-monooxygenase activity (obsolete GO:0018647)","termid":"GO:0018647"}


id: PBO:0014248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint ubiquitin ligase Dma1","termid":"PBO:0014248"}


id: PBO:0086410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GPI-anchored aspartic protease; member of the yapsin family of proteases involved in cell wall growth and maintenance","termid":"PBO:0086410"}


id: PATO:0000507
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000507 disease sensitivity value (obsolete PATO:0000507)","termid":"PATO:0000507"}


id: GO:0002569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of heavy chain immunoglobulin and T cell receptor genes. N regions are found at the V-D, D-D, V-J, and D-J recombinational junctions, depending on the immune receptor gene.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"}


id: PBO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8S rRNA (predicted)","termid":"PBO:0001034"}


id: PBO:0049823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain containing 2","termid":"PBO:0049823"}


id: MONDO:1010965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cauda equina syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cauda equina syndrome, non-human animal","termid":"MONDO:1010227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauda equina syndrome, dog","secondary_identifiers":["OMIA:000170-9615"],"termid":"MONDO:1010965","xrefs":{"Monarch":{"xref_id":"1010965"}}}


id: GO:0003082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which angiotensin directly increases the rate of natriuresis and diuresis in the kidney.","definition_xrefs":["GOC:dph","GOC:mtg_cardio","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of renal output by angiotensin (obsolete GO:0003082)","synonyms":[{"name":"angiotensin mediated positive regulation of renal output","type":"exact"},{"name":"angiotensin-mediated positive regulation of renal output","type":"exact"},{"name":"positive regulation of renal output by angiotensin","type":"exact"}],"termid":"GO:0003082"}


id: PR:O14297
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.15","synonyms":[{"name":"Spom972h-SPAC9E9.15","type":"exact"}],"termid":"PR:O14297"}


id: SO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant within a gene that contributes to a quantitative trait such as height or weight.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_phenotype","termid":"SO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quantitative_variant","synonyms":[{"name":"quantitative variant","type":"exact"}],"termid":"SO:0001774"}


id: PBO:0078745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 9B (putative)","termid":"PBO:0078745"}


id: MONDO:0800449
data:
  {"annotated_genes":["SJAG_04790","SJAG_00158","SJAG_02068"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87151,87149,87150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019149"},{"annotations":[87407,87408,87406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019148"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"lysosomal lipid storage disorder","termid":"MONDO:0019245"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"lysosomal acid lipase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080217","MESH:C531854","GARD:12097","icd11.foundation:381622932","MEDGEN:1807768","Orphanet:275761","SCTID:715923003","OMIMPS:278000","UMLS:C5574740"],"synonyms":[{"name":"LAL deficiency","type":"exact"}],"termid":"MONDO:0800449","terms_by_termid":{"MONDO:0019148":null,"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0800449"}}}


id: MONDO:1011415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, non-human animal","secondary_identifiers":["OMIA:000037"],"termid":"MONDO:1011415","xrefs":{"Monarch":{"xref_id":"1011415"}}}


id: MONDO:0012324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare partial deletion of the long arm of chromosome 14 characterized by ocular anomalies (anopthalmia/microphthalmia, ptosis, hypertelorism, exophthalmos), pituitary anomalies (pituitary hypoplasia/aplasia with growth hormone deficiency and growth retardation) and hand/foot anomalies (polydactyly, short digits, pes cavus). Other clinical features may include muscular hypotonia, psychomotor development delay/intellectual disability, dysmorphic signs (facial asymmetry, microretrognathia, high-arched palate, ear anomalies), congenital genitourinary malformations, hearing impairment. Smaller 14q22 deletions may have variable expression.","definition_xrefs":["Orphanet:264200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Frias syndrome","secondary_identifiers":["OMIM:609640","UMLS:C1864825","GARD:2384","MEDGEN:400621","MESH:C535639","Orphanet:2055"],"synonyms":[{"name":"14q22-q23 microdeletion syndrome","type":"exact"},{"name":"14q22q23 microdeletion syndrome","type":"exact"},{"name":"Del(14)(q22q23)","type":"exact"},{"name":"Frias syndrome","type":"exact"},{"name":"Growth deficiency, Facial anomalies, and brachydactyly","type":"related"},{"name":"chromosome 14Q22 deletion syndrome","type":"related"},{"name":"monosomy 14q22-q23","type":"exact"},{"name":"monosomy 14q22q23","type":"exact"}],"termid":"MONDO:0012324","xrefs":{"Monarch":{"xref_id":"0012324"}}}


id: PBO:0039715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 1","termid":"PBO:0039715"}


id: PBO:0082958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein involved in the regulation of enolase (ENO1); mRNA expression is induced by calcium shortage, copper deficiency (via Mac1p) and the presence of galactose (via Gal4p); mRNA expression is also regulated by the cell cycle","termid":"PBO:0082958"}


id: FYECO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any series of two or more different sets of conditions used in a single experiment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping sequential growth conditions","termid":"FYECO:0000094"}


id: MOD:01532
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01532"}


id: PBO:0081268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33B pseudogene 1","termid":"PBO:0081268"}


id: MONDO:0015448
data:
  {"annotated_genes":["SJAG_01490","SJAG_00755","SJAG_03490","SJAG_00080","SJAG_02646","SJAG_04560","SJAG_05305","SJAG_01405","SJAG_00601","SJAG_03099","SJAG_00354"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032909"},{"annotations":[87531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859321"},{"annotations":[88285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007415"},{"annotations":[86949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014063"},{"annotations":[86950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014064"},{"annotations":[86948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014065"},{"annotations":[86952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014066"},{"annotations":[87749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014194"},{"annotations":[88233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014356"},{"annotations":[88239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014364"},{"annotations":[88513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014496"}]},"cv_name":"mondo","definition":"Isolated complex III deficiency is a rare, genetic, mitochondrial oxidative phosphorylation disorder characterized by a wide spectrum of clinical manifestations ranging from isolated myopathy or transient hepatopathy to severe multisystem disorder (that may include hypotonia, failure to thrive, psychomotor delay, cardiomyopathy, encephalopathy, renal tubulopathy, hearing impairment, lactic acidosis, hypoglycemia and other signs and symptoms).","definition_xrefs":["Orphanet:1460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00354":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_01405":null,"SJAG_01490":null,"SJAG_02646":null,"SJAG_03099":null,"SJAG_03490":null,"SJAG_04560":null,"SJAG_05305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex III deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8295","DOID:0111139","MEDGEN:377658","UMLS:C1852372"],"synonyms":[{"name":"isolated CoQ-cytochrome C reductase deficiency","type":"exact"},{"name":"isolated coenzyme Q-cytochrome C reductase deficiency","type":"exact"},{"name":"isolated complex III deficiency","type":"related"},{"name":"isolated mitochondrial respiratory chain complex III deficiency","type":"exact"},{"name":"isolated ubiquinone-cytochrome C reductase deficiency","type":"exact"}],"termid":"MONDO:0015448","terms_by_termid":{"MONDO:0007415":null,"MONDO:0014063":null,"MONDO:0014064":null,"MONDO:0014065":null,"MONDO:0014066":null,"MONDO:0014194":null,"MONDO:0014356":null,"MONDO:0014364":null,"MONDO:0014496":null,"MONDO:0032909":null,"MONDO:0859321":null},"xrefs":{"Monarch":{"xref_id":"0015448"}}}


id: MONDO:0008476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spondyloepimetaphyseal dysplasia characterized by disproportionate short stature from birth (with a very short trunk and shortened limbs) and skeletal abnormalities (lordosis, scoliosis, flattened vertebrae, pectus carinatum, coxa vara, clubfoot, and abnormal epiphyses or metaphyses).","definition_xrefs":["Orphanet:93346"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"},{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Strudwick type","secondary_identifiers":["UMLS:C0700635","NANDO:2201349","SCTID:702350003","ICD9:758.89","DOID:0080028","GARD:134","MEDGEN:147134","OMIM:184250"],"synonyms":[{"name":"SEMD, Strudwick type","type":"related"},{"name":"SEMDSTWK","type":"related"},{"name":"SMED Strudwick type","type":"related"},{"name":"SMED type 1","type":"related"},{"name":"Semdc","type":"related"},{"name":"SmD","type":"related"},{"name":"Smed, Strudwick type","type":"related"},{"name":"Smed, type 1","type":"related"},{"name":"Strudwick syndrome","type":"related"},{"name":"dappled metaphysis syndrome","type":"related"},{"name":"spondyloepimetaphyseal dysplasia Strudwick type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia congenita, Strudwick type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Strudwick type","type":"exact"},{"name":"spondylometaepiphyseal dysplasia congenita, Strudwick type","type":"related"},{"name":"spondylometaphyseal dysplasia","type":"related"}],"termid":"MONDO:0008476","xrefs":{"Monarch":{"xref_id":"0008476"}}}


id: GO:0052686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: perillic acid + CoA-SH + ATP = H2O + AMP + diphosphate + perillyl-CoA.","definition_xrefs":["PMID:24952578","KEGG_REACTION:R06368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"perillic acid-CoA ligase (AMP-forming) activity","synonyms":[{"name":"perillic acid:CoA ligase (AMP-forming) activity","type":"exact"},{"name":"perillyl-CoA synthetase activity","type":"broad"}],"termid":"GO:0052686"}


id: GO:0046406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Mg-protoporphyrin IX + S-adenosyl-L-methionine = Mg-protoporphyrin IX 13-monomethyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:17809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"magnesium protoporphyrin IX methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN","EC:2.1.1.11","KEGG_REACTION:R04237"],"synonyms":[{"name":"(-)-S-adenosyl-L-methionine:magnesium-protoporphyrin IX methyltransferase activity","type":"related"},{"name":"Mg-protoporphyrin IX methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:Mg protoporphyrin methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:magnesium-protoporphyrin O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:magnesium-protoporphyrin-IX O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-magnesium protoporphyrin methyltransferase activity","type":"related"},{"name":"S-adenosylmethioninemagnesium protoporphyrin methyltransferase activity","type":"related"},{"name":"magnesium-protoporphyrin O-methyltransferase activity","type":"exact"}],"termid":"GO:0046406"}


id: GO:0001615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete thyrotropin releasing hormone and secretagogue-like receptors activity (obsolete GO:0001615)","synonyms":[{"name":"thyrotropin releasing hormone and secretagogue-like receptors activity","type":"exact"}],"termid":"GO:0001615"}


id: PBO:0085894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; localized to the vacuolar outer membrane; predicted to be palmitoylated","termid":"PBO:0085894"}


id: PBO:0047907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(8)(q24.3)","termid":"PBO:0047907"}


id: PBO:0001065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Threonine","termid":"PBO:0001065"}


id: MONDO:0022854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital unilateral pulmonary hypoplasia","termid":"MONDO:0022854","xrefs":{"Monarch":{"xref_id":"0022854"}}}


id: PBO:0087369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT methyltransferase; catalyzes omega-monomethylation of Rps3p on Arg-146; not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism","termid":"PBO:0087369"}


id: MONDO:0100035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of epilepsy that is conceptualized as having a distinct structural brain abnormality that has been demonstrated to be associated with a substantially increased risk of epilepsy in appropriately designed studies. The structural brain abnormality can be acquired (such as due to stroke, trauma or infection) or may be of genetic origin; however, as we currently understand it, the structural brain abnormality is a separate disorder interposed between the acquired or genetic defect and the epilepsy.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"structural epilepsy","secondary_identifiers":["MEDGEN:1843494","UMLS:C4524097"],"termid":"MONDO:0100035","xrefs":{"Monarch":{"xref_id":"0100035"}}}


id: PBO:0071597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 14","termid":"PBO:0071597"}


id: PR:O14214
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA methyltransferase 10 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01012","PRO:DNx","PANTHER:PTHR13563:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(9)-N1)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.09","secondary_identifiers":["UniProtKB:O14214"],"synonyms":[{"name":"Spom972h-TRMT10A","type":"exact"},{"name":"tRNA methyltransferase 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1G9)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1G9)MTase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14214"}


id: PBO:0080778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 9","termid":"PBO:0080778"}


id: PBO:0004371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex large subunit Nuc1","termid":"PBO:0004371"}


id: PBO:0066849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 149","termid":"PBO:0066849"}


id: PBO:0111832
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C5HC2 type","termid":"PBO:0111832"}


id: PR:O94341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.08c gene.","definition_xrefs":["UniProtKB:O94341","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1271.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.08c","synonyms":[{"name":"Spom972h-SPBC1271.08c","type":"exact"}],"termid":"PR:O94341"}


id: MONDO:0044783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well circumscribed, low grade neoplasm that arises from the breast. It is characterized by the presence of sheets of malignant epithelial cells that are supported by fibrovascular structures. When there is an invasive component present, it is usually a mucinous carcinoma.","definition_xrefs":["NCIT:C6870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast papillary carcinoma","termid":"MONDO:0003532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"solid papillary breast carcinoma","secondary_identifiers":["UMLS:C1336027","MEDGEN:236831","ONCOTREE:SPC"],"synonyms":[{"name":"solid Papillary breast carcinoma","type":"exact"},{"name":"solid Papillary carcinoma of the breast","type":"exact"}],"termid":"MONDO:0044783","xrefs":{"Monarch":{"xref_id":"0044783"}}}


id: PBO:0081792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 722","termid":"PBO:0081792"}


id: MONDO:0004283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vulvar sweat gland carcinoma characterized by the presence of clear cells.","definition_xrefs":["NCIT:C40307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hidradenocarcinoma","termid":"MONDO:0006245"},{"relation_name":"is_a","term_name":"vulvar adenocarcinoma","termid":"MONDO:0024336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"vulvar clear cell hidradenocarcinoma","secondary_identifiers":["DOID:7567","MEDGEN:275614","UMLS:C1520076"],"synonyms":[{"name":"vulvar clear cell hidradenocarcinoma","type":"exact"}],"termid":"MONDO:0004283","xrefs":{"Monarch":{"xref_id":"0004283"}}}


id: GO:0071888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a macrophage, a mononuclear phagocyte present in a variety of tissues.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:mtg_apoptosis","CL:0000235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory cell apoptotic process","termid":"GO:0006925"},{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"},{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage apoptotic process","synonyms":[{"name":"AICD","type":"related"},{"name":"activation-induced cell death","type":"related"},{"name":"macrophage apoptosis","type":"narrow"}],"termid":"GO:0071888"}


id: MONDO:0007694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hairy nose tip","secondary_identifiers":["MEDGEN:333893","MESH:C535619","OMIM:139630","UMLS:C1841695"],"synonyms":[{"name":"HNT","type":"related"},{"name":"hairy nose tip","type":"exact"}],"termid":"MONDO:0007694","xrefs":{"Monarch":{"xref_id":"0007694"}}}


id: PBO:0073988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 2","termid":"PBO:0073988"}


id: GO:0033653
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a chloroplast as it is found in host cells and which are a chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell chloroplast","termid":"GO:0033652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell chloroplast part","synonyms":[{"name":"host chloroplast component","type":"exact"}],"termid":"GO:0033653"}


id: PBO:0082898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin, interacts with cyclin-dependent kinase Pho85p; member of the Pcl1,2-like subfamily, involved in the regulation of polarized growth and morphogenesis and progression through the cell cycle; localizes to sites of polarized cell growth; PCL2 has a paralog, PCL9, that arose from the whole genome duplication","termid":"PBO:0082898"}


id: PBO:0046869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focally amplified long non-coding RNA in epithelial cancer","termid":"PBO:0046869"}


id: MONDO:0030030
data:
  {"annotated_genes":["SJAG_00156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87218],"is_not":false,"summary":null,"term":"MONDO:0030030"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00156":null},"genotype_count":0,"is_obsolete":false,"name":"Nizon-Isidor syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1715748","UMLS:C5394350","OMIM:618872"],"synonyms":[{"name":"NIZIDS","type":"exact"},{"name":"NIZON-ISIDOR SYNDROME","type":"exact"},{"name":"nizon-isidor syndrome","type":"exact"}],"termid":"MONDO:0030030","terms_by_termid":{"MONDO:0030030":null},"xrefs":{"Monarch":{"xref_id":"0030030"}}}


id: GO:1904731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intestinal lipid absorption.","definition_xrefs":["GOC:TermGenie","PMID:18768481","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intestinal absorption","termid":"GO:1904480"},{"relation_name":"is_a","term_name":"regulation of intestinal lipid absorption","termid":"GO:1904729"},{"relation_name":"positively_regulates","term_name":"intestinal lipid absorption","termid":"GO:0098856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intestinal lipid absorption","synonyms":[{"name":"activation of intestinal lipid absorption","type":"narrow"},{"name":"up regulation of intestinal lipid absorption","type":"exact"},{"name":"up-regulation of intestinal lipid absorption","type":"exact"},{"name":"upregulation of intestinal lipid absorption","type":"exact"}],"termid":"GO:1904731"}


id: MONDO:0005291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired aneurysm within the cranium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral arterial disease","termid":"MONDO:0006693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain aneurysm","secondary_identifiers":["EFO:0003870","MEDGEN:196706","MESH:D002532","UMLS:C0751003","DOID:10941"],"synonyms":[{"name":"brain aneurysm","type":"exact"},{"name":"intracranial aneurysm","type":"related"}],"termid":"MONDO:0005291","xrefs":{"Monarch":{"xref_id":"0005291"}}}


id: PBO:0072671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 4","termid":"PBO:0072671"}


id: PBO:0044224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin domain containing 1","termid":"PBO:0044224"}


id: PBO:0051658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interphotoreceptor matrix proteoglycan 1","termid":"PBO:0051658"}


id: RO:0002413
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p1 directly provides input for p2 iff there exists some c such that p1 has_output c and p2 has_input c","direct_ancestors":[{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"RO:0002412"},{"relation_name":"is_a","term_name":"transitively_provides_input_for","termid":"RO:0002414"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_provides_input_for","termid":"RO:0002413"}


id: GO:0031402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sodium ion (Na+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkali metal ion binding","termid":"GO:0031420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0046872","GO:0003674"],"is_obsolete":false,"name":"sodium ion binding","synonyms":[{"name":"Na+ ion binding","type":"exact"}],"termid":"GO:0031402"}


id: PBO:0028035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_equatorial_microtubule_organizing_center_assembly","termid":"PBO:0028035"}


id: GO:1900440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"}


id: MONDO:1012789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs in dogs due to a mutation in the ATP1B2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary ataxia, non-human animal","termid":"MONDO:1012959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar ataxia, ATP1B2-related, dog","secondary_identifiers":["OMIA:002110-9615"],"synonyms":[{"name":"ataxia, cerebellar, ATP1B2-related, dog","type":"exact"},{"name":"spongy degeneration with cerebellar ataxia 2","type":"related"}],"termid":"MONDO:1012789","xrefs":{"Monarch":{"xref_id":"1012789"}}}


id: PBO:0005773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane zinc transporter (predicted)","termid":"PBO:0005773"}


id: GO:1901004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving ubiquinone-6. Ubiquinone-6 is a ubiquinone compound having a (2E,6E,10E,14E,18E)-3,7,11,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaen-1-yl substituent at position 2.","definition_xrefs":["GOC:al","PMID:1409592","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone-6 metabolic process (obsolete GO:1901004)","synonyms":[{"name":"coenzyme Q6 metabolic process","type":"exact"},{"name":"coenzyme Q6 metabolism","type":"exact"},{"name":"ubiquinone-6 metabolism","type":"exact"}],"termid":"GO:1901004"}


id: MONDO:0015773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibular dimelia-diplopodia syndrome is a rare developmental anomaly.","definition_xrefs":["Orphanet:1757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibular dimelia-diplopodia syndrome","secondary_identifiers":["MEDGEN:929427","SCTID:720953006","UMLS:C4303758","GARD:18746"],"synonyms":[{"name":"leg duplication-mirror foot syndrome","type":"exact"}],"termid":"MONDO:0015773","xrefs":{"Monarch":{"xref_id":"0015773"}}}


id: MONDO:0008645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by cardiac arrhythmias (ventricular extrasystoles manifesting as bigeminy or multifocal tachycardia with syncopal episodes), perodactyly (hypoplasia and/or agenesis of the distal phalanges of the toes) and Pierre-Robin sequence.","definition_xrefs":["Orphanet:3201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular extrasystoles with syncopal episodes-perodactyly-robin sequence syndrome","secondary_identifiers":["GARD:5472","MEDGEN:395493","OMIM:192445","SCTID:719823007","MESH:C537497","UMLS:C1860471"],"synonyms":[{"name":"Stoll-Kieny-Dott syndrome","type":"exact"},{"name":"ventricular extrasystoles perodactyly Robin sequence","type":"related"},{"name":"ventricular extrasystoles with syncopal episodes - perodactyly - Robin sequence","type":"related"},{"name":"ventricular extrasystoles with syncope, perodactyly, and ROBIN sequence","type":"related"}],"termid":"MONDO:0008645","xrefs":{"Monarch":{"xref_id":"0008645"}}}


id: PBO:0069783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1068, pseudogene","termid":"PBO:0069783"}


id: GO:0140737
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Intracellular non-membrane bound organelle, consisting of proteinaceous polyhedral shells that encapsulate enzymes, protecting the contents from their surrounding milieu and/or the milieu from reactants in their interior. The self-assembling, 25-42 nm nanocompartment shell, unlike larger bacterial microcompartments, is made of only one protein, and has only a few proteins inside. Shells about vary from about 25-42 nm in diameter. The shell protein has an HK97-like fold and probably evolved from a viral protein. Artificial encapsulin nanocompartments can be expressed and filled with cargo proteins for biotechnological uses. They are found in many bacterial and a few archaeal phyla.","definition_xrefs":["PMID:32918485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"encapsulin nanocompartment","synonyms":[{"name":"protein nanocompartment","type":"broad"}],"termid":"GO:0140737"}


id: GO:0044114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of symbiont in host","secondary_identifiers":["GO:0044122","GO:0044124"],"synonyms":[{"name":"development of symbiont in host intercellular space","type":"narrow"},{"name":"development of symbiont in host vascular tissue","type":"narrow"}],"termid":"GO:0044114"}


id: PBO:0111336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp7","termid":"PBO:0111336"}


id: MOD:01351
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a nitrated L-tryptophan.","definition_xrefs":["PubMed:9252331","Unimod:354#W","OMSSA:85","PubMed:8839040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrosylation","termid":"MOD:00461"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated L-tryptophan","synonyms":[{"name":"Nitro","type":"related"},{"name":"Oxidation to nitro","type":"related"},{"name":"nitrow","type":"exact"}],"termid":"MOD:01351"}


id: GO:0046260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of trinitrotoluene, a methylated benzene entity with three NO2 groups attached to it. This includes the explosive TNT, 1-methyl-2,4,6-trinitrobenzene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trinitrotoluene metabolic process","termid":"GO:0018973"},{"relation_name":"is_a","term_name":"nitrotoluene catabolic process","termid":"GO:0046263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trinitrotoluene catabolic process","synonyms":[{"name":"trinitrotoluene breakdown","type":"exact"},{"name":"trinitrotoluene catabolism","type":"exact"},{"name":"trinitrotoluene degradation","type":"exact"}],"termid":"GO:0046260"}


id: MONDO:0037252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ovarian or testicular stromal tumor characterized by the presence of lipid-rich neoplastic spindle cells. In females, uterine bleeding is the most common symptom. A minority of post-menopausal women with thecoma have an associated endometrial adenocarcinoma or rarely a malignant mixed mullerian tumor or endometrial stromal sarcoma. Rare cases with nuclear atypia and mitotic activity may metastasize. In males, thecomas are rare and they usually present as slow growing, sometimes painful masses. Metastases have not been reported.","definition_xrefs":["NCIT:C3405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thecoma","secondary_identifiers":["MEDGEN:21505","MESH:D013798","UMLS:C0039747","ICDO:8600/0"],"synonyms":[{"name":"thecoma","type":"exact"}],"termid":"MONDO:0037252","xrefs":{"Monarch":{"xref_id":"0037252"}}}


id: GO:0000213
data:
  {"annotated_genes":["SJAG_04907","SJAG_03328","SJAG_01260","SJAG_00754"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73204,74654,80754,119672],"is_not":false,"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: pretRNA = a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus.","definition_xrefs":["EC:4.6.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"tRNA-specific ribonuclease activity","termid":"GO:0004549"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"tRNA-intron lyase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.27.9-RXN"],"synonyms":[{"name":"tRNA splicing endonuclease activity","type":"related"},{"name":"tRNA-intron endonuclease activity","type":"exact"},{"name":"tRNA-intron endoribonuclease activity","type":"exact"}],"termid":"GO:0000213","terms_by_termid":{"GO:0000213":null}}


id: PBO:0004189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Spc24","termid":"PBO:0004189"}


id: PBO:0117192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENHO antisense RNA 1","termid":"PBO:0117192"}


id: PBO:0057543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 659","termid":"PBO:0057543"}


id: GO:0090718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adaptive immune response that involves one or more immune effector processes and takes place during the effector phase of the adaptive immune response.","definition_xrefs":["ISBN:1405196831","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune effector response","termid":"GO:0090718"}


id: PBO:0048542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET1 pseudogene 1","termid":"PBO:0048542"}


id: GO:0034545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fumarylpyruvate + H2O = fumarate + pyruvate + H+.","definition_xrefs":["UM-BBD_reactionID:r0811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fumarylpyruvate hydrolase activity","secondary_identifiers":["EC:3.7.1.20","RHEA:26168"],"termid":"GO:0034545"}


id: PBO:0071125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 127","termid":"PBO:0071125"}


id: GO:0001523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"retinoid metabolic process","secondary_identifiers":["Reactome:R-HSA-2453902","Reactome:R-HSA-2187335","Reactome:R-HSA-975634"],"synonyms":[{"name":"retinoid metabolism","type":"exact"}],"termid":"GO:0001523"}


id: PBO:0029646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_population_at_high_temperature_(obsolete_FYPO:0002074)","termid":"PBO:0029646"}


id: MONDO:0045022
data:
  {"annotated_genes":["SJAG_00582","SJAG_02107","SJAG_01471","SJAG_03671","SJAG_02271","SJAG_00516","SJAG_03556","SJAG_03222","SJAG_00839","SJAG_02433","SJAG_01903","SJAG_04042","SJAG_03247","SJAG_03861","SJAG_03641","SJAG_02235","SJAG_03064","SJAG_04192","SJAG_03290","SJAG_00605","SJAG_01061","SJAG_02306","SJAG_02796","SJAG_01147","SJAG_02791","SJAG_00866","SJAG_03457","SJAG_01417","SJAG_02007","SJAG_03069","SJAG_02006","SJAG_03293","SJAG_01070","SJAG_03660","SJAG_03434","SJAG_00461","SJAG_03659","SJAG_04149","SJAG_03275","SJAG_01466","SJAG_01199","SJAG_02158","SJAG_03310","SJAG_02313","SJAG_00944","SJAG_03098","SJAG_00495","SJAG_03553","SJAG_04495","SJAG_04449","SJAG_03701","SJAG_01164","SJAG_02009","SJAG_00674","SJAG_00120","SJAG_04334","SJAG_02369","SJAG_01924","SJAG_00212","SJAG_00660","SJAG_04499","SJAG_03712","SJAG_02388","SJAG_04459","SJAG_04425","SJAG_02901","SJAG_02397","SJAG_04016"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011614"},{"annotations":[87533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009603"},{"annotations":[87449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[89045,89044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[86835,86834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[88892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[86981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[88627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[88626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[88876,88875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011534"},{"annotations":[87143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009352"},{"annotations":[87811,87812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[86856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009058"},{"annotations":[87267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[86877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"},{"annotations":[88826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[88488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013166"},{"annotations":[86827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958179"},{"annotations":[88214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958192"},{"annotations":[86974,86973,86975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013046"},{"annotations":[89047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010392"},{"annotations":[87657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009865"},{"annotations":[87495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[87238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100186"},{"annotations":[87276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012999"},{"annotations":[87998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[88304,88305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"},{"annotations":[88093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[87087,87088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[88307,88306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[87262,87263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009388"},{"annotations":[88726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013404"},{"annotations":[88551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009400"},{"annotations":[88509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009401"},{"annotations":[87337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100058"},{"annotations":[88459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013762"},{"annotations":[87260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014576"},{"annotations":[86940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014057"},{"annotations":[89079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[86958,86959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[87786],"is_not":false,"rel_names"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disease that has its basis in the disruption of organic acid metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic 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of organic acid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:277.89","MEDGEN:468982","NANDO:2100161","UMLS:C1263739","SCTID:116021002"],"synonyms":[{"name":"disorder of organic acid metabolic process","type":"exact"},{"name":"disorder of organic acid metabolism","type":"exact"},{"name":"organic acid metabolic process disease","type":"exact"},{"name":"organic acid metabolism 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id: PBO:0036265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A thioesterase","termid":"PBO:0036265"}


id: FYPO:0007895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B is increased at pericentromeric heterochromatin. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PMID:34731638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0005607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H2B-K119 ubiquitination at pericentromeric heterochromatin","termid":"FYPO:0007895"}


id: GO:0097407
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Small granular inclusions (about 1-3 microns in diameter) found in the anterior horn cells, and appearing either singly or in a group. Sometimes they are arranged in small beaded chains. Bunina bodies express cystatin C and consist of electron-dense amorphous material that contains tubules or vesicular structures. The amorphous material frequently includes a cytoplasmic island containing neurofilaments and other micro-organelles.","definition_xrefs":["PMID:18026741","NIF_Subcellular:nlx_subcell_20090101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Bunina body","termid":"GO:0097407"}


id: PBO:0004581
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe GlycoProtease","termid":"PBO:0004581"}


id: GO:0072482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle spindle orientation checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic spindle checkpoint signaling","termid":"GO:0072476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic cell cycle spindle orientation checkpoint signaling","synonyms":[{"name":"mitotic cell cycle spindle orientation checkpoint effector process","type":"exact"},{"name":"response to signal involved in mitotic cell cycle spindle orientation checkpoint","type":"exact"}],"termid":"GO:0072482"}


id: PBO:0048922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member S","termid":"PBO:0048922"}


id: PBO:0004370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal protein Syp1 (predicted)","termid":"PBO:0004370"}


id: PBO:0076088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STT3A antisense RNA 1","termid":"PBO:0076088"}


id: MONDO:0100141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A COVID-19 infection where individuals who have evidence of lower respiratory disease by clinical assessment or imaging and a saturation of oxygen (SpO2) >93% on room air at sea level.","gene_count":0,"genotype_count":0,"name":"obsolete moderate COVID-19 infection (obsolete MONDO:0100141)","termid":"MONDO:0100141","xrefs":{"Monarch":{"xref_id":"0100141"}}}


id: GO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by the detection of carbon dioxide levels in the brain stem. Increased levels activate the sympathetic vasoconstrictor mechanism increasing the force with which blood flows through the circulatory system.","definition_xrefs":["GOC:tb","ISBN:0721643949","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by ischemic conditions","synonyms":[{"name":"CNS ischemic response","type":"related"},{"name":"ischemic control of blood pressure","type":"related"},{"name":"ischemic regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001980"}


id: FYPO:0002801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein degradation is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein degradation during nitrogen starvation","synonyms":[{"name":"normal protein breakdown during nitrogen starvation","type":"exact"},{"name":"normal protein catabolic process during nitrogen starvation","type":"exact"},{"name":"normal protein catabolism during nitrogen starvation","type":"exact"},{"name":"normal protein degradation during nitrogen depletion","type":"exact"},{"name":"normal protein degradation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002801"}


id: FYPO:0004173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to heat","synonyms":[{"name":"decreased protein phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to heat stress","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0004173"}


id: PBO:0005484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA desaturase (predicted)","termid":"PBO:0005484"}


id: PBO:0109282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTX2 pseudogene 1","termid":"PBO:0109282"}


id: GO:0015474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Transports a passenger protein from the periplasm to the external milieu; the passenger protein and the porin are the N- and C-terminal regions of the same protein, respectively.","definition_xrefs":["TC:1.B.12.-.-","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"autotransporter activity","termid":"GO:0015474"}


id: PBO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine phosphatase Pyp2","termid":"PBO:0002880"}


id: GO:2000019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of male gonad development.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gonad development","termid":"GO:1905940"},{"relation_name":"is_a","term_name":"regulation of male gonad development","termid":"GO:2000018"},{"relation_name":"negatively_regulates","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of male gonad development","synonyms":[{"name":"negative regulation of testicular development","type":"exact"},{"name":"negative regulation of testis development","type":"exact"}],"termid":"GO:2000019"}


id: GO:1900307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltoheptaose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heptasaccharide transport","termid":"GO:1900295"},{"relation_name":"is_a","term_name":"regulation of maltoheptaose transport","termid":"GO:1900306"},{"relation_name":"negatively_regulates","term_name":"maltoheptaose transport","termid":"GO:2001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of maltoheptaose transport","synonyms":[{"name":"down regulation of maltoheptaose transport","type":"exact"},{"name":"down-regulation of maltoheptaose transport","type":"exact"},{"name":"downregulation of maltoheptaose transport","type":"exact"},{"name":"inhibition of maltoheptaose transport","type":"narrow"}],"termid":"GO:1900307"}


id: PBO:0043522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 4 homolog","termid":"PBO:0043522"}


id: SO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence that has translocated to a new position. The observed adjacency of two previously separated regions.","definition_xrefs":["SO:ke","NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_alteration","termid":"SO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation","synonyms":[{"name":"transchr","type":"related"},{"name":"translocated sequence","type":"exact"}],"termid":"SO:0000199"}


id: PBO:0053455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 407","termid":"PBO:0053455"}


id: PBO:0039141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AJUBA divergent transcript","termid":"PBO:0039141"}


id: PBO:0047963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(X)(q27.3) A","termid":"PBO:0047963"}


id: MONDO:0001624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of sphenoid sinusitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphenoid sinusitis","termid":"MONDO:0005964"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute sphenoidal sinusitis","secondary_identifiers":["MEDGEN:510089","icd11.foundation:348880565","SCTID:77919000","UMLS:C0155807","DOID:13046","ICD10CM:J01.3","ICD9:461.3"],"synonyms":[{"name":"acute sphenoid sinusitis","type":"exact"},{"name":"sphenoid sinusitis, acute","type":"exact"},{"name":"sphenoidal sinus -acute","type":"exact"}],"termid":"MONDO:0001624","xrefs":{"Monarch":{"xref_id":"0001624"}}}


id: MONDO:1011592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Portosystemic shunt that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic shunt, non-human animal","termid":"MONDO:1011409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic shunt, horse","secondary_identifiers":["OMIA:000817-9796"],"termid":"MONDO:1011592","xrefs":{"Monarch":{"xref_id":"1011592"}}}


id: GO:0005277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of acetylcholine from one side of a membrane to the other. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transmembrane transporter activity","termid":"GO:0005326"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"acetate ester transmembrane transporter activity","termid":"GO:1901375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"acetylcholine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-264615"],"termid":"GO:0005277"}


id: GO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of C-type lectin to its receptor on the surface of a target cell, and resulting in cellular activation.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response activating cell surface receptor signaling pathway","termid":"GO:0002220"},{"relation_name":"is_a","term_name":"cellular response to lectin","termid":"GO:1990858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"stimulatory C-type lectin receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-5621481"],"synonyms":[{"name":"stimulatory C-type lectin receptor signalling pathway","type":"exact"},{"name":"stimulatory Ly49 family receptor signaling pathway","type":"narrow"}],"termid":"GO:0002223"}


id: GO:0006915
data:
  {"annotated_genes":["SJAG_03258","SJAG_00737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81386,75883],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0043065"}]},"cv_name":"biological_process","definition":"A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.","definition_xrefs":["ISBN:0198506732","PMID:21494263","GOC:mtg_apoptosis","GOC:go_curators","GOC:cjm","GOC:tb","PMID:18846107","GOC:dhl","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-109581","Wikipedia:Apoptosis","GO:0006917","GO:0008632"],"synonyms":[{"name":"activation of apoptosis","type":"narrow"},{"name":"apoptosis","type":"narrow"},{"name":"apoptosis activator activity","type":"related"},{"name":"apoptosis signaling","type":"narrow"},{"name":"apoptotic cell death","type":"exact"},{"name":"apoptotic program","type":"narrow"},{"name":"apoptotic programmed cell death","type":"exact"},{"name":"caspase-dependent programmed cell death","type":"related"},{"name":"cell suicide","type":"broad"},{"name":"cellular suicide","type":"broad"},{"name":"commitment to apoptosis","type":"related"},{"name":"induction of apoptosis","type":"related"},{"name":"induction of apoptosis by p53","type":"related"},{"name":"programmed cell death by apoptosis","type":"exact"},{"name":"signaling (initiator) caspase activity","type":"related"},{"name":"type I programmed cell death","type":"narrow"}],"termid":"GO:0006915","terms_by_termid":{"GO:0043065":null}}


id: MONDO:0009165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Aicardi-Goutieres syndrome in which the cause of the disease is a mutation in the TREX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Aicardi-Goutieres syndrome","termid":"MONDO:0018866"},{"relation_name":"is_a","term_name":"TREX1-related type 1 interferonopathy","termid":"MONDO:0700256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"Aicardi-Goutieres syndrome 1","secondary_identifiers":["MEDGEN:162912","UMLS:C0796126","NCIT:C165501","GARD:15167","OMIM:225750"],"synonyms":[{"name":"AGS1","type":"related"},{"name":"Ags","type":"related"},{"name":"Aicardi-Goutieres syndrome 1","type":"exact"},{"name":"Aicardi-Goutieres syndrome 1, autosomal dominant","type":"related"},{"name":"Aicardi-Goutieres syndrome 1, dominant and recessive","type":"exact"},{"name":"Aicardi-Goutieres syndrome caused by mutation in TREX1","type":"exact"},{"name":"Aicardi-Goutieres syndrome type 1","type":"exact"},{"name":"Cree encephalitis","type":"related"},{"name":"Pseudotoxoplasmosis syndrome","type":"related"},{"name":"TREX1 Aicardi-Goutieres syndrome","type":"exact"},{"name":"encephalopathy, familial infantile, with intracranial calcification and chronic cerebrospinal fluid lymphocytosis","type":"related"}],"termid":"MONDO:0009165","xrefs":{"Monarch":{"xref_id":"0009165"}}}


id: FYPO:0001526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing L-thialysine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on L-thialysine","synonyms":[{"name":"normal cell population growth in presence of L-thialysine","type":"exact"},{"name":"normal cell population growth on L-thialysine","type":"exact"},{"name":"normal cell population growth on thialysine","type":"broad"},{"name":"normal cellular response to L-thialysine","type":"related"},{"name":"normal vegetative cell population growth on L-thialysine","type":"exact"}],"termid":"FYPO:0001526"}


id: RO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x anabranch_of y if x is a distributary of y (i.e. it channels a from a larger flow from y) and x ultimately channels the flow back into y.","direct_ancestors":[{"relation_name":"is_a","term_name":"distributary_of","termid":"RO:0002377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anabranch_of","termid":"RO:0002378"}


id: MONDO:0010934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete DFNB5 (obsolete MONDO:0010934)","termid":"MONDO:0010934","xrefs":{"Monarch":{"xref_id":"0010934"}}}


id: PBO:0005362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp2 (predicted)","termid":"PBO:0005362"}


id: PBO:0005584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf1","termid":"PBO:0005584"}


id: PBO:0062264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily F member 1","termid":"PBO:0062264"}


id: PBO:0003715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pop3","termid":"PBO:0003715"}


id: GO:1902036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hematopoietic stem cell differentiation.","definition_xrefs":["PMID:23403623","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"is_a","term_name":"regulation of stem cell differentiation","termid":"GO:2000736"},{"relation_name":"regulates","term_name":"hematopoietic stem cell differentiation","termid":"GO:0060218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hematopoietic stem cell differentiation","secondary_identifiers":["Reactome:R-HSA-8939236"],"synonyms":[{"name":"regulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"regulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"regulation of hemopoietic stem cell differentiation","type":"exact"}],"termid":"GO:1902036"}


id: PBO:0081475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 350","termid":"PBO:0081475"}


id: PBO:0017460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-host_of","termid":"PBO:0017460"}


id: GO:0019917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The dehydration of peptidyl-serine, followed by hydrogenation to produce peptidyl-D-alanine.","definition_xrefs":["RESID:AA0191"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-D-alanine racemization via peptidyl-L-serine (obsolete GO:0019917)","termid":"GO:0019917"}


id: GO:2001009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant-type cell wall cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of cellulose biosynthetic process","termid":"GO:2001006"},{"relation_name":"regulates","term_name":"plant-type cell wall cellulose biosynthetic process","termid":"GO:0052324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of plant-type cell wall cellulose biosynthetic process","synonyms":[{"name":"regulation of cell wall cellulose biosynthesis","type":"exact"},{"name":"regulation of cellulose biosynthesis during cell wall biosynthesis","type":"related"}],"termid":"GO:2001009"}


id: SO:0000470
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Germline genomic DNA of an immunoglobulin/T-cell receptor gene including J-region with 5' UTR (SO:0000204) and 3' UTR (SO:0000205), also designated as J-segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_segment","termid":"SO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_gene_segment","synonyms":[{"name":"INSDC_feature:J_segment","type":"exact"},{"name":"J gene","type":"exact"},{"name":"J-GENE","type":"exact"}],"termid":"SO:0000470"}


id: GO:0008428
data:
  {"annotated_genes":["SJAG_02594"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060698"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ribonuclease.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease inhibitor activity","termid":"GO:0140721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02594":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0004857","GO:0140678","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"ribonuclease inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA nuclease inhibitor activity","type":"exact"}],"termid":"GO:0008428","terms_by_termid":{"GO:0060698":null}}


id: SO:0001095
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with cobalt ions.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_cobalt_ion_contact_site","secondary_identifiers":["BS:00136"],"synonyms":[{"name":"Co_contact_site","type":"exact"},{"name":"polypeptide cobalt ion contact site","type":"exact"}],"termid":"SO:0001095"}


id: PBO:0088952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2406 family conserved fungal protein","termid":"PBO:0088952"}


id: PBO:0048869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA4 antisense RNA 1","termid":"PBO:0048869"}


id: GO:0045434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the receptiveness of a female to male advances subsequent to mating.","definition_xrefs":["PMID:11092827","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of female receptivity","termid":"GO:0007621"},{"relation_name":"is_a","term_name":"regulation of female receptivity, post-mating","termid":"GO:0046008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of female receptivity, post-mating","synonyms":[{"name":"down regulation of female receptivity, post-mating","type":"exact"},{"name":"down-regulation of female receptivity, post-mating","type":"exact"},{"name":"downregulation of female receptivity, post-mating","type":"exact"},{"name":"inhibition of female receptivity, post-mating","type":"narrow"}],"termid":"GO:0045434"}


id: PBO:0016947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mde1","termid":"PBO:0016947"}


id: PBO:0068956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 200, pseudogene","termid":"PBO:0068956"}


id: GO:0007527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adult somatic muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult somatic muscle development","termid":"GO:0007527"}


id: PBO:0053099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 5A","termid":"PBO:0053099"}


id: MONDO:0013783
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88491],"is_not":false,"summary":null,"term":"MONDO:0013783"}]},"cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the ABCB6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614497","UMLS:C3281027","MEDGEN:482657","GARD:15811"],"synonyms":[{"name":"ABCB6 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"MCOPCB7","type":"related"},{"name":"microphthalmia, isolated, with coloboma 7","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in ABCB6","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 7","type":"exact"}],"termid":"MONDO:0013783","terms_by_termid":{"MONDO:0013783":null},"xrefs":{"Monarch":{"xref_id":"0013783"}}}


id: MONDO:0012886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 17q21.2.","definition_xrefs":["PMID:18438405","DOID:0110905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 22","secondary_identifiers":["MEDGEN:382862","OMIM:612380","UMLS:C2676485","MESH:C567327"],"synonyms":[{"name":"IBD22","type":"exact"},{"name":"inflammatory bowel disease 22","type":"exact"},{"name":"inflammatory bowel disease type 22","type":"exact"}],"termid":"MONDO:0012886","xrefs":{"Monarch":{"xref_id":"0012886"}}}


id: PBO:0041395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 putative open reading frame 67","termid":"PBO:0041395"}


id: SO:1000040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tandem duplication where the individual regions are not in the same orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_duplication","termid":"SO:1000173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_tandem_duplication","synonyms":[{"name":"inverted tandem duplication","type":"exact"},{"name":"mirror duplication","type":"related"}],"termid":"SO:1000040"}


id: SO:0100003
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of polypeptide chain with high conformational flexibility.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"intrinsically_unstructured_polypeptide_region","synonyms":[{"name":"disordered region","type":"related"},{"name":"intrinsically unstructured polypeptide region","type":"exact"}],"termid":"SO:0100003"}


