# terms

id: PBO:0000553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin","termid":"PBO:0000553"}


id: PBO:0051526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor like 2","termid":"PBO:0051526"}


id: PBO:0116763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN2 antisense RNA 1","termid":"PBO:0116763"}


id: GO:0021896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an astrocyte residing in the forebrain. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","PMID:16226447","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte differentiation","termid":"GO:0048708"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain astrocyte differentiation","termid":"GO:0021896"}


id: GO:2000204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ribosomal large subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal subunit export from nucleus","termid":"GO:2000201"},{"relation_name":"is_a","term_name":"regulation of ribosomal large subunit export from nucleus","termid":"GO:2000203"},{"relation_name":"negatively_regulates","term_name":"ribosomal large subunit export from nucleus","termid":"GO:0000055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"negatively_regulates","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006810","GO:0042254","GO:0006913"],"is_obsolete":false,"name":"negative regulation of ribosomal large subunit export from nucleus","synonyms":[{"name":"negative regulation of 50S ribosomal subunit export from nucleus","type":"related"},{"name":"negative regulation of 60S ribosomal subunit export from nucleus","type":"related"},{"name":"negative regulation of ribosomal large subunit export from cell nucleus","type":"exact"},{"name":"negative regulation of ribosomal large subunit export out of nucleus","type":"exact"},{"name":"negative regulation of ribosomal large subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of ribosomal large subunit-nucleus export","type":"exact"}],"termid":"GO:2000204"}


id: PBO:0017956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA splicing (predicted)","termid":"PBO:0017956"}


id: GO:0051938
data:
  {"annotated_genes":["SJAG_03256","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[98433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate, the L-enantiomer of the anion of 2-aminopentanedioic acid, into a cell or organelle.","definition_xrefs":["GOC:jsg","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-glutamate import","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-glutamate uptake","type":"exact"}],"termid":"GO:0051938","terms_by_termid":{"GO:0015813":null,"GO:0090515":null}}


id: PBO:0060943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 4","termid":"PBO:0060943"}


id: GO:1901299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide-mediated programmed cell death.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901298"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide-mediated programmed cell death","synonyms":[{"name":"down regulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"down-regulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"downregulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"inhibition of hydrogen peroxide-mediated programmed cell death","type":"narrow"}],"termid":"GO:1901299"}


id: MONDO:0000337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is due to human herpesvirus (HHV) types 6 or 7; it is characterized by 3-5 days of high fever followed by the acute onset of a rosy, pink, non-pruritic, macular rash that is predominantly on the neck and trunk.","definition_xrefs":["NCIT:C128420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"exanthema subitum","secondary_identifiers":["ICD9:058.1","ICD9:058.10","SCTID:54385001","MESH:D005077","EFO:1001320","UMLS:C0015231","ICD9:057.8","DOID:0050495","MEDGEN:41909"],"synonyms":[{"name":"exanthem subitum","type":"exact"},{"name":"pseudorubella","type":"related"},{"name":"roseola","type":"exact"},{"name":"roseola Infantum","type":"exact"},{"name":"sixth disease","type":"exact"}],"termid":"MONDO:0000337","xrefs":{"Monarch":{"xref_id":"0000337"}}}


id: SO:0001276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A guanosine base that has been modified.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_guanosine","synonyms":[{"name":"modified guanosine","type":"exact"}],"termid":"SO:0001276"}


id: GO:0072192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell in the urothelium. The urothelium is the epithelial tube of the ureter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"ureter urothelium development","termid":"GO:0072190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter epithelial cell differentiation","termid":"GO:0072192"}


id: SO:0001124
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Wild type: A motif of seven consecutive residues that contains two H-bonds in which: the main-chain CO of residue(i) is H-bonded to the main-chain NH of residue(i+6), the main-chain CO of residue(i+1) is H-bonded to the main-chain NH of residue(i+5).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schellmann_loop","termid":"SO:0001123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"schellmann_loop_seven","secondary_identifiers":["BS:00228"],"synonyms":[{"name":"schellmann loop seven","type":"exact"},{"name":"seven-residue schellmann loop","type":"exact"}],"termid":"SO:0001124"}


id: MONDO:0007370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coracoclavicular joint, anomalous","secondary_identifiers":["UMLS:C1852561","MESH:C565161","MEDGEN:377706","OMIM:121350"],"synonyms":[{"name":"coracoclavicular joint, anomalous","type":"exact"}],"termid":"MONDO:0007370","xrefs":{"Monarch":{"xref_id":"0007370"}}}


id: PBO:0026837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G1_phase","termid":"PBO:0026837"}


id: PBO:0067772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 72","termid":"PBO:0067772"}


id: PBO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 1","termid":"PBO:0052583"}


id: GO:0051061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dADP + thioredoxin disulfide + H2O = ADP + thioredoxin.","definition_xrefs":["MetaCyc:ADPREDUCT-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor","termid":"GO:0004748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ADP reductase activity","secondary_identifiers":["RHEA:28034"],"synonyms":[{"name":"ADP reduction","type":"related"}],"termid":"GO:0051061"}


id: PBO:0045580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 2","termid":"PBO:0045580"}


id: MONDO:0030088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"permanent neonatal diabetes mellitus","termid":"MONDO:0100164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005015","MONDO:0004335","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"diabetes mellitus, permanent neonatal 3","secondary_identifiers":["GARD:16389","MEDGEN:1717271","OMIM:618857","UMLS:C5394303"],"synonyms":[{"name":"DIABETES MELLITUS, PERMANENT NEONATAL 3","type":"exact"},{"name":"Developmental Delay, Epilepsy, and Neonatal Diabetes 2","type":"exact"},{"name":"PNDM3","type":"exact"},{"name":"diabetes mellitus, permanent neonatal 3","type":"exact"},{"name":"diabetes mellitus, permanent neonatal 3, with or without neurologic features","type":"exact"}],"termid":"MONDO:0030088","xrefs":{"Monarch":{"xref_id":"0030088"}}}


id: GO:0003993
data:
  {"annotated_genes":["SJAG_02405","SJAG_04067","SJAG_01970","SJAG_01667","SJAG_00711"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63785,76252,76497,80295,112190],"is_not":false,"summary":null,"term":"GO:0003993"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum.","definition_xrefs":["EC:3.1.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00711":null,"SJAG_01667":null,"SJAG_01970":null,"SJAG_02405":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"acid phosphatase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ACID-PHOSPHATASE-RXN","Reactome:R-HSA-196950"],"synonyms":[{"name":"acid monophosphatase activity","type":"related"},{"name":"acid nucleoside diphosphate phosphatase activity","type":"related"},{"name":"acid phosphohydrolase activity","type":"related"},{"name":"acid phosphomonoester hydrolase activity","type":"related"},{"name":"acid phosphomonoesterase activity","type":"related"},{"name":"glycerophosphatase activity","type":"broad"},{"name":"orthophosphoric-monoester phosphohydrolase (acid optimum)","type":"related"},{"name":"phosphate-monoester phosphohydrolase (acid optimum)","type":"related"},{"name":"phosphomonoesterase activity","type":"broad"},{"name":"uteroferrin","type":"related"}],"termid":"GO:0003993","terms_by_termid":{"GO:0003993":null}}


id: GO:1903788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutathione biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of glutathione biosynthetic process","termid":"GO:1903786"},{"relation_name":"positively_regulates","term_name":"glutathione biosynthetic process","termid":"GO:0006750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"positive regulation of glutathione biosynthetic process","synonyms":[{"name":"activation of glutathione anabolism","type":"narrow"},{"name":"activation of glutathione biosynthesis","type":"narrow"},{"name":"activation of glutathione biosynthetic process","type":"narrow"},{"name":"activation of glutathione formation","type":"narrow"},{"name":"activation of glutathione synthesis","type":"narrow"},{"name":"positive regulation of glutathione anabolism","type":"exact"},{"name":"positive regulation of glutathione biosynthesis","type":"exact"},{"name":"positive regulation of glutathione formation","type":"exact"},{"name":"positive regulation of glutathione synthesis","type":"exact"},{"name":"up regulation of glutathione anabolism","type":"exact"},{"name":"up regulation of glutathione biosynthesis","type":"exact"},{"name":"up regulation of glutathione biosynthetic process","type":"exact"},{"name":"up regulation of glutathione formation","type":"exact"},{"name":"up regulation of glutathione synthesis","type":"exact"},{"name":"up-regulation of glutathione anabolism","type":"exact"},{"name":"up-regulation of glutathione biosynthesis","type":"exact"},{"name":"up-regulation of glutathione biosynthetic process","type":"exact"},{"name":"up-regulation of glutathione formation","type":"exact"},{"name":"up-regulation of glutathione synthesis","type":"exact"},{"name":"upregulation of glutathione anabolism","type":"exact"},{"name":"upregulation of glutathione biosynthesis","type":"exact"},{"name":"upregulation of glutathione biosynthetic process","type":"exact"},{"name":"upregulation of glutathione formation","type":"exact"},{"name":"upregulation of glutathione synthesis","type":"exact"}],"termid":"GO:1903788"}


id: MONDO:0044334
data:
  {"annotated_genes":["SJAG_03689","SJAG_00991","SJAG_00490","SJAG_01111","SJAG_02855","SJAG_00031","SJAG_04213","SJAG_05346","SJAG_00289","SJAG_05313","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[87148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[88746,88745,88747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011705"},{"annotations":[88499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[87003,87002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89138,89139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[88752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm that affects the connective and soft tissue.","definition_xrefs":["NCIT:C3810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00289":null,"SJAG_00490":null,"SJAG_00991":null,"SJAG_01111":null,"SJAG_02855":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"connective and soft tissue neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:60224","UMLS:C0206765"],"synonyms":[{"name":"connective and soft tissue neoplasm","type":"exact"},{"name":"connective and soft tissue tumor","type":"exact"},{"name":"connective and soft tissue tumour","type":"exact"},{"name":"musculoskeletal and soft tissue neoplasm","type":"exact"},{"name":"musculoskeletal and soft tissue tumor","type":"exact"},{"name":"musculoskeletal and soft tissue tumour","type":"exact"},{"name":"neoplasm of skeletal and soft tissue","type":"exact"},{"name":"neoplasm of soft tissue and bone","type":"exact"},{"name":"neoplasm of soft tissue and skeleton","type":"exact"},{"name":"skeletal and soft tissue neoplasm","type":"exact"},{"name":"skeletal and soft tissue tumor","type":"exact"},{"name":"skeletal and soft tissue tumour","type":"exact"},{"name":"soft tissue and bone neoplasm","type":"exact"},{"name":"soft tissue and bone tumor","type":"exact"},{"name":"soft tissue and bone tumour","type":"exact"},{"name":"tumor of skeletal and soft tissue","type":"exact"},{"name":"tumor of soft tissue and bone","type":"exact"},{"name":"tumor of soft tissue and skeleton","type":"exact"},{"name":"tumour of skeletal and soft tissue","type":"exact"},{"name":"tumour of soft tissue and bone","type":"exact"},{"name":"tumour of soft tissue and skeleton","type":"exact"}],"termid":"MONDO:0044334","terms_by_termid":{"MONDO:0007908":null,"MONDO:0010621":null,"MONDO:0011655":null,"MONDO:0011705":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0044334"}}}


id: PBO:0027447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_okadaic_acid","termid":"PBO:0027447"}


id: PBO:0047244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member D","termid":"PBO:0047244"}


id: FYPO:0003097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in centromere outer repeat regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone H3-K9 methylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 methylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 methylation at centromere otr during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 methylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 methylation at centromeric dg repeats during vegetative growth","type":"narrow"},{"name":"abolished histone H3-K9 methylation at centromeric outer repeat during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 methylation at pericentric region during vegetative growth","type":"related"},{"name":"abolished histone H3-K9 methylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abolished histone H3K9me at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 methylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation at centromere outer repeat abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003097"}


id: FYPO:0000998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"},{"relation_name":"is_a","term_name":"abnormal cell morphology during nitrogen starvation","termid":"FYPO:0000995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"elongated cell during nitrogen starvation","synonyms":[{"name":"cell morphology, elongated cell during nitrogen starvation","type":"exact"},{"name":"elongated cell during nitrogen depletion","type":"exact"},{"name":"elongated cell during nitrogen deprivation","type":"exact"},{"name":"gain of polarization during quiescence","type":"related"},{"name":"long cell during nitrogen starvation","type":"exact"}],"termid":"FYPO:0000998"}


id: MONDO:0700131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sarcoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma, non-human animal","termid":"MONDO:0700131","xrefs":{"Monarch":{"xref_id":"0700131"}}}


id: FYPO:0006442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the proteolytic processing of sterol regulatory element binding protein (SREBP) into its transcriptionally active form is activated continuously. Normally, SREBP is cleaved only in response to altered levels of one or more lipids.","definition_xrefs":["PomBase:mah","PMID:18503029","GO:0035103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein processing during vegetative growth","termid":"FYPO:0001421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"constitutively activated sterol regulatory element binding protein cleavage","synonyms":[{"name":"constitutively activated SREBP cleavage","type":"exact"},{"name":"constitutively activated sterol regulatory element binding protein cleavage during mitotic cell cycle","type":"related"},{"name":"constitutively activated sterol regulatory element binding protein cleavage during vegetative growth","type":"exact"}],"termid":"FYPO:0006442"}


id: MONDO:0017963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XX disorder of sex development induced by endogenous maternal-derived androgen (obsolete MONDO:0017963)","secondary_identifiers":["Orphanet:325093"],"synonyms":[{"name":"46,XX DSD induced by endogenous maternal-derived androgen","type":"exact"}],"termid":"MONDO:0017963","xrefs":{"Monarch":{"xref_id":"0017963"}}}


id: PBO:0070670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 41","termid":"PBO:0070670"}


id: MONDO:0008843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, severe, circulatory system disease characterized by premature, diffuse, severe atherosclerosis (including the aorta and renal, coronary, and cerebral arteries), sensorineural deafness, diabetes mellitus, progressive neurological deterioration with cerebellar symptoms and photomyoclonic seizures, and progressive nephropathy. Partial deficiency of mitochondrial complexes III and IV in the kidney and fibroblasts (but not in muscle) may be associated. There have been no further descriptions in the literature since 1994.","definition_xrefs":["Orphanet:1192"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy syndrome","termid":"MONDO:0015650"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atherosclerosis-deafness-diabetes-epilepsy-nephropathy syndrome","secondary_identifiers":["OMIM:209010","UMLS:C1859596","GARD:2279","SCTID:720519003","MESH:C565928","MEDGEN:349198"],"synonyms":[{"name":"Feigenbaum Bergeron Richardson syndrome","type":"related"},{"name":"Feigenbaum-Bergeron-Richardson syndrome","type":"exact"},{"name":"atherosclerosis, premature, with deafness, nephropathy, diabetes mellitus, photomyoclonus, and degenerative neurologic disease","type":"related"},{"name":"premature atherosclerosis with photomyoclonic epilepsy, deafness, diabetes mellitus, nephropathy, and neurodegenerative disorder","type":"related"}],"termid":"MONDO:0008843","xrefs":{"Monarch":{"xref_id":"0008843"}}}


id: PBO:0074119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC30A4 antisense RNA 1","termid":"PBO:0074119"}


id: FYPO:0006924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates at or near replication fork barriers is lower than normal.","definition_xrefs":["PMID:31149897","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased number of Rad52 foci during vegetative growth","termid":"FYPO:0004516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Rad52 foci at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased number of Rad22 foci at mitotic DNA replication fork barriers","type":"exact"},{"name":"decreased number of Rad52 foci at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased number of Rad52 foci at mitotic DNA replication fork barriers during vegetative growth","type":"related"},{"name":"reduced number of Rad52 foci at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006924"}


id: MONDO:0004584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"},{"relation_name":"is_a","term_name":"fungal lung infectious disease","termid":"MONDO:0005766"},{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"maple bark strippers' lung","secondary_identifiers":["UMLS:C0155890","ICD9:495.6","MEDGEN:510126","DOID:8484","SCTID:86638007"],"synonyms":[{"name":"alveolitis due to cryptostroma corticale","type":"exact"},{"name":"maple bark disease","type":"exact"},{"name":"maple bark stripper's disease","type":"exact"},{"name":"maple bark stripper's lung","type":"exact"},{"name":"maple bark-strippers' lung","type":"exact"},{"name":"maple-bark strippers' lung","type":"exact"}],"termid":"MONDO:0004584","xrefs":{"Monarch":{"xref_id":"0004584"}}}


id: PBO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene malic acid transport protein","termid":"PBO:0000059"}


id: PBO:0027560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0027560"}


id: PBO:0016942
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Histone Deacetylase","termid":"PBO:0016942"}


id: PBO:0110316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF for Sar1, WD repeat protein Spo14","termid":"PBO:0110316"}


id: FYECO:0000329
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which formamide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ formamide","termid":"FYECO:0000329"}


id: GO:0003754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct non-covalent assembly of polypeptide-containing structures in vivo, but is not a component of these assembled structures when they are performing their normal biological function.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone activity (obsolete GO:0003754)","synonyms":[{"name":"chaperone activity","type":"exact"}],"termid":"GO:0003754"}


id: PBO:0050041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 9 (pseudogene)","termid":"PBO:0050041"}


id: PBO:0084864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; contains twin cysteine-x9-cysteine motifs; oxidized by Mia40p during import into mitochondria","termid":"PBO:0084864"}


id: PBO:0046062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 1","termid":"PBO:0046062"}


id: GO:0050090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannonate + NAD(P)+ = D-mannuronate + NAD(P)H + H+.","definition_xrefs":["MetaCyc:MANNURONATE-REDUCTASE-RXN","EC:1.1.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mannuronate reductase activity","synonyms":[{"name":"D-mannonate:NAD(P)+ 6-oxidoreductase activity","type":"related"},{"name":"D-mannonate:nicotinamide adenine dinucleotide (phosphate oxidoreductase (D-mannuronate-forming))","type":"related"},{"name":"mannonate (nicotinamide adenine dinucleotide (phosphate))dehydrogenase activity","type":"related"},{"name":"mannonate dehydrogenase (NAD(P)+)","type":"related"},{"name":"mannonate dehydrogenase activity","type":"related"}],"termid":"GO:0050090"}


id: PBO:0068217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 524","termid":"PBO:0068217"}


id: PBO:0042646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 21 pseudogene","termid":"PBO:0042646"}


id: PBO:0050954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFNG antisense RNA 1","termid":"PBO:0050954"}


id: GO:0061238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an epithelium that contributes to the shaping of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity involved in nephron morphogenesis","termid":"GO:0072046"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity involved in mesonephric nephron morphogenesis","synonyms":[{"name":"establishment of planar cell polarity involved in mesonephric nephron morphogenesis","type":"narrow"}],"termid":"GO:0061238"}


id: PBO:0047116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 163 member A","termid":"PBO:0047116"}


id: PBO:0060301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 11","termid":"PBO:0060301"}


id: PBO:0042824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 3","termid":"PBO:0042824"}


id: GO:0016466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in archae.","definition_xrefs":["TC:3.A.2.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating A-type ATPase activity (obsolete GO:0016466)","synonyms":[{"name":"hydrogen-translocating A-type ATPase activity","type":"exact"},{"name":"proton-translocating A-type ATPase activity","type":"exact"}],"termid":"GO:0016466"}


id: PBO:0034277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_end_location","termid":"PBO:0034277"}


id: PBO:0055617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3056","termid":"PBO:0055617"}


id: PBO:0039376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomotin like 1","termid":"PBO:0039376"}


id: FYPO:0006250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA aminoacylation, the formation of an ester bond between a tRNA molecule and an amino acid specified by the tRNA anticodon, is abnormal. All tRNAs aminoacylation may be abnormal, or the aminoacylation of one or more specific tRNAs may be affected.","definition_xrefs":["GO:0006418","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abnormal tRNA aminoacylation","synonyms":[{"name":"abnormal tRNA aminoacylation during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA aminoacylation during vegetative growth","type":"exact"},{"name":"abnormal tRNA aminoacylation for protein translation","type":"exact"},{"name":"abnormal tRNA charging","type":"narrow"}],"termid":"FYPO:0006250"}


id: PBO:0030135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_zinc_starvation","termid":"PBO:0030135"}


id: RO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_ends","termid":"RO:0002084"}


id: PBO:0085523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S25, no bacterial homolog; RPS25A has a paralog, RPS25B, that arose from the whole genome duplication","termid":"PBO:0085523"}


id: MONDO:0027416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal cone dystrophy 2 (obsolete MONDO:0027416)","secondary_identifiers":["OMIM:601251"],"synonyms":[{"name":"Cone dystrophy progressive","type":"related"},{"name":"Progressive cone degeneration","type":"related"},{"name":"RCD2","type":"related"}],"termid":"MONDO:0027416","xrefs":{"Monarch":{"xref_id":"0027416"}}}


id: GO:0007131
data:
  {"annotated_genes":["SJAG_04205","SJAG_02294","SJAG_02465","SJAG_05333","SJAG_00935","SJAG_02311","SJAG_02460","SJAG_04748","SJAG_01076","SJAG_00100","SJAG_00980","SJAG_02181","SJAG_00266","SJAG_03048","SJAG_00172","SJAG_00377","SJAG_02556","SJAG_03720","SJAG_05295","SJAG_03219","SJAG_00757","SJAG_03525","SJAG_01419","SJAG_03221","SJAG_03751","SJAG_05373","SJAG_02490","SJAG_04950","SJAG_00623","SJAG_02592","SJAG_02652","SJAG_01156","SJAG_01410","SJAG_03567","SJAG_00908","SJAG_02339","SJAG_02295","SJAG_02708","SJAG_03438","SJAG_02822","SJAG_07002","SJAG_02616","SJAG_01677","SJAG_01138","SJAG_01708","SJAG_00727","SJAG_04303","SJAG_02267","SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70914,72782,79550,81167,91420,92633,93305,94521,94594,102474,102537,103036,105771,106236,106760,108654,117522],"is_not":false,"summary":null,"term":"GO:0007131"},{"annotations":[109905],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010846"},{"annotations":[109593,118784,90984,100933,90356],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[106796,111597,113088,92161,110692],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010780"},{"annotations":[112255,109595],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[64152,112256,98790,90297,109596,119094,80612,103419],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[80615,90298,102439],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[109908],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045128"},{"annotations":[110300,104275],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[90883],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010845"},{"annotations":[118268,90991,96224],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010520"},{"annotations":[110087,112279,78603,76092,81095,119437,76689,111030,119289,73499],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[118217],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double strand breaks are formed and repaired through a single or double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.","definition_xrefs":["PMID:2087779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reciprocal homologous recombination","termid":"GO:0140527"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00172":null,"SJAG_00266":null,"SJAG_00377":null,"SJAG_00623":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_00908":null,"SJAG_00935":null,"SJAG_00980":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01138":null,"SJAG_01156":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01677":null,"SJAG_01708":null,"SJAG_02181":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02295":null,"SJAG_02311":null,"SJAG_02339":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02490":null,"SJAG_02556":null,"SJAG_02592":null,"SJAG_02616":null,"SJAG_02652":null,"SJAG_02708":null,"SJAG_02822":null,"SJAG_03048":null,"SJAG_03219":null,"SJAG_03221":null,"SJAG_03438":null,"SJAG_03525":null,"SJAG_03567":null,"SJAG_03720":null,"SJAG_03751":null,"SJAG_04205":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_04950":null,"SJAG_05295":null,"SJAG_05333":null,"SJAG_05373":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0007049","GO:0006259","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0007145","GO:0000021"],"synonyms":[{"name":"female meiotic recombination","type":"narrow"},{"name":"gene conversion with reciprocal crossover","type":"exact"}],"termid":"GO:0007131","terms_by_termid":{"GO:0000709":null,"GO:0000712":null,"GO:0007131":null,"GO:0010520":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null,"GO:0062209":null,"GO:1905263":null,"GO:1990918":null}}


id: MOD:00163
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(N-acetylaminogalactosyl)-L-serine.","definition_xrefs":["PubMed:115869","PubMed:16005634","PubMed:8948436","PubMed:3086323","RESID:AA0154","PubMed:9092502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated residue","termid":"MOD:00563"},{"relation_name":"is_a","term_name":"O-(N-acetylamino)hexosyl-L-serine","termid":"MOD:01675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(N-acetylamino)galactosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(2-acetamido-2-deoxy-alpha-D-galactopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GalNAc) serine","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O-(N-acetylamino)galactosyl-L-serine","type":"exact"},{"name":"O3-(N-acetylgalactosaminyl)serine","type":"exact"},{"name":"OGalNAcSer","type":"exact"},{"name":"mucin type O-glycosylserine","type":"exact"}],"termid":"MOD:00163"}


id: MONDO:0033479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia 44","secondary_identifiers":["MEDGEN:1611168","OMIM:617691","UMLS:C4521563","Orphanet:631095","DOID:0080286"],"synonyms":[{"name":"SCA44","type":"related"},{"name":"spinocerebellar ataxia 44","type":"exact"}],"termid":"MONDO:0033479","xrefs":{"Monarch":{"xref_id":"0033479"}}}


id: PBO:0029168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_dTDP_level","termid":"PBO:0029168"}


id: SO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a CDS.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_region","synonyms":[{"name":"CDS region","type":"exact"}],"termid":"SO:0000851"}


id: PBO:0074233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC47A1 pseudogene 2","termid":"PBO:0074233"}


id: PBO:0025461
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate metabolism disorders","termid":"PBO:0025461"}


id: MONDO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inflammatory skin and bowel disease, neonatal (obsolete MONDO:0000180)","termid":"MONDO:0000180","xrefs":{"Monarch":{"xref_id":"0000180"}}}


id: PBO:0071224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 65","termid":"PBO:0071224"}


id: PBO:0085662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in negative regulation of transcription; required for RNA polyadenylation; exhibits regulated interactions with both histones and SWI-SNF components; relocalizes to the cytosol in response to hypoxia; similar to mammalian HMG1 proteins","termid":"PBO:0085662"}


id: PBO:0055332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2760","termid":"PBO:0055332"}


id: PBO:0061941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily Q member 1","termid":"PBO:0061941"}


id: MOD:01246
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00812 after formula correction. Remap to MOD:00812.","definition_xrefs":["PubMed:3578767","PubMed:15189151","PubMed:3311742","Unimod:295#S","PubMed:11344537"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01246 fucosylated -site S (obsolete MOD:01246)","synonyms":[{"name":"Fucose","type":"related"},{"name":"dHex","type":"related"}],"termid":"MOD:01246"}


id: GO:0035729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hepatocyte growth factor","termid":"GO:0035728"},{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hepatocyte growth factor stimulus","synonyms":[{"name":"cellular response to HGF stimulus","type":"exact"}],"termid":"GO:0035729"}


id: PBO:0055182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2606","termid":"PBO:0055182"}


id: MONDO:0020206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare refraction anomaly (obsolete MONDO:0020206)","secondary_identifiers":["Orphanet:98618"],"termid":"MONDO:0020206","xrefs":{"Monarch":{"xref_id":"0020206"}}}


id: FYPO:0003393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which electron transport involved in cellular respiration is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal respiratory electron transport","synonyms":[{"name":"abnormal respiratory electron transport chain","type":"exact"},{"name":"abnormal respiratory electron transport during mitotic cell cycle","type":"related"},{"name":"abnormal respiratory electron transport process during vegetative growth","type":"exact"}],"termid":"FYPO:0003393"}


id: PBO:0050563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRG pseudogene 1","termid":"PBO:0050563"}


id: GO:0003429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a chondrocyte in the growth plate cartilage are generated and organized.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte morphogenesis involved in endochondral bone morphogenesis","termid":"GO:0003414"},{"relation_name":"is_a","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte differentiation","termid":"GO:0003418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte morphogenesis","termid":"GO:0003429"}


id: PBO:0050516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D cluster","termid":"PBO:0050516"}


id: MONDO:0958333
data:
  {"annotated_genes":["SJAG_03818","SJAG_01784","SJAG_02951"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88963,88964,88965],"is_not":false,"summary":null,"term":"MONDO:0958333"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02951":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 13, syndromic","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620776","UMLS:C5935599","MEDGEN:1856296"],"termid":"MONDO:0958333","terms_by_termid":{"MONDO:0958333":null},"xrefs":{"Monarch":{"xref_id":"0958333"}}}


id: GO:0022878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sucrose(out) = protein histidine + sucrose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose transmembrane transporter activity","termid":"GO:0008515"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0022857","GO:0016740","GO:0005215","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sucrose phosphotransferase system transporter activity","secondary_identifiers":["RHEA:49236","MetaCyc:SUCROSEPHOSPHO-RXN"],"synonyms":[{"name":"sucrose PTS transporter activity","type":"exact"}],"termid":"GO:0022878"}


id: PBO:0026960
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_localization","termid":"PBO:0026960"}


id: PBO:0061918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily E member 1","termid":"PBO:0061918"}


id: GO:0048394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a intermediate mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"intermediate mesodermal cell fate commitment","termid":"GO:0048393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell fate determination","synonyms":[{"name":"intermediate mesoderm cell fate determination","type":"exact"}],"termid":"GO:0048394"}


id: PBO:0039597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANP32A intronic transcript 1","termid":"PBO:0039597"}


id: GO:1901001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to salt stress.","definition_xrefs":["GOC:TermGenie","PMID:22627139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to salt stress","termid":"GO:1901000"},{"relation_name":"negatively_regulates","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to salt stress","synonyms":[{"name":"down regulation of response to ionic osmotic stress","type":"exact"},{"name":"down regulation of response to salt stress","type":"exact"},{"name":"down regulation of salinity response","type":"exact"},{"name":"down-regulation of response to ionic osmotic stress","type":"exact"},{"name":"down-regulation of response to salt stress","type":"exact"},{"name":"down-regulation of salinity response","type":"exact"},{"name":"downregulation of response to ionic osmotic stress","type":"exact"},{"name":"downregulation of response to salt stress","type":"exact"},{"name":"downregulation of salinity response","type":"exact"},{"name":"inhibition of response to ionic osmotic stress","type":"exact"},{"name":"inhibition of response to salt stress","type":"narrow"},{"name":"inhibition of salinity response","type":"exact"},{"name":"negative regulation of response to ionic osmotic stress","type":"exact"},{"name":"negative regulation of salinity response","type":"exact"}],"termid":"GO:1901001"}


id: GO:0010284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lariciresinol + NADPH + H+ = secoisolariciresinol + NADP+.","definition_xrefs":["PMID:7592828","PMID:10066819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, reducing C-O-C group as acceptor","termid":"GO:0120546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"lariciresinol reductase activity","termid":"GO:0010284"}


id: MONDO:0958197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leber hereditary optic neuropathy, autosomal recessive","termid":"MONDO:0030309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"Leber-like hereditary optic neuropathy, autosomal recessive 2","secondary_identifiers":["MEDGEN:1845294","OMIM:620569","UMLS:C5882713"],"termid":"MONDO:0958197","xrefs":{"Monarch":{"xref_id":"0958197"}}}


id: MONDO:0019150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Familial restrictive cardiomyopathy is a genetic form of heart disease, in which the heart muscle is stiff and cannot fully relax after each contraction. Impaired muscle relaxation causes blood to back up in the atria and lungs, which reduces the amount of blood in the ventricles.","gene_count":0,"genotype_count":0,"name":"obsolete familial isolated restrictive cardiomyopathy (obsolete MONDO:0019150)","secondary_identifiers":["Orphanet:75249"],"synonyms":[{"name":"familial or idiopathic restrictive cardiomyopathy","type":"exact"}],"termid":"MONDO:0019150","xrefs":{"Monarch":{"xref_id":"0019150"}}}


id: GO:0002756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A toll-like receptor signaling pathway not relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate an immune response.","definition_xrefs":["PMID:15728447","PMID:12524386","PMID:15585605","PMID:12467241","ISBN:0781735149","PMID:12855817","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"MyD88-independent toll-like receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-166166","Reactome:R-HSA-168927"],"synonyms":[{"name":"MyD88-independent TLR signaling pathway","type":"exact"},{"name":"MyD88-independent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002756"}


id: PBO:0038506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 1","termid":"PBO:0038506"}


id: FYPO:0005650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal premeiotic DNA replication","termid":"FYPO:0002043"},{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal onset of premeiotic DNA replication","synonyms":[{"name":"normal timing of premeiotic DNA replication","type":"related"}],"termid":"FYPO:0005650"}


id: GO:0043648
data:
  {"annotated_genes":["SJAG_00203","SJAG_00714","SJAG_03275","SJAG_02276","SJAG_00337","SJAG_00495","SJAG_00518","SJAG_03485","SJAG_00815","SJAG_04145","SJAG_04054","SJAG_03266","SJAG_01126","SJAG_03580","SJAG_01592","SJAG_03224","SJAG_01753","SJAG_00695","SJAG_00493","SJAG_03457","SJAG_03306","SJAG_00937","SJAG_02408","SJAG_00529","SJAG_01198","SJAG_04156","SJAG_02235","SJAG_00106","SJAG_04843","SJAG_01903","SJAG_02176","SJAG_02225","SJAG_00224","SJAG_00359","SJAG_03434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110287,114380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[119726,96117,73894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[80181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[79477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[72617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[116068,96444,103147,92932,91661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009423"},{"annotations":[69991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[72810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046452"},{"annotations":[106705,108009,61191,114381,70621,110288,57105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[72812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[91994,81080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006106"},{"annotations":[81413,93546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[89652,92710,94781,104521,106666,113773,113869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006536"},{"annotations":[113196,119727,60097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[75008,62707,81081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006108"},{"annotations":[74105,108709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006107"},{"annotations":[71993,79904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing two carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00203":null,"SJAG_00224":null,"SJAG_00337":null,"SJAG_00359":null,"SJAG_00493":null,"SJAG_00495":null,"SJAG_00518":null,"SJAG_00529":null,"SJAG_00695":null,"SJAG_00714":null,"SJAG_00815":null,"SJAG_00937":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01592":null,"SJAG_01753":null,"SJAG_01903":null,"SJAG_02176":null,"SJAG_02225":null,"SJAG_02235":null,"SJAG_02276":null,"SJAG_02408":null,"SJAG_03224":null,"SJAG_03266":null,"SJAG_03275":null,"SJAG_03306":null,"SJAG_03434":null,"SJAG_03457":null,"SJAG_03485":null,"SJAG_03580":null,"SJAG_04054":null,"SJAG_04145":null,"SJAG_04156":null,"SJAG_04843":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dicarboxylic acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"dicarboxylate metabolic process","type":"exact"},{"name":"dicarboxylate metabolism","type":"exact"},{"name":"dicarboxylic acid metabolism","type":"exact"}],"termid":"GO:0043648","terms_by_termid":{"GO:0006106":null,"GO:0006107":null,"GO:0006108":null,"GO:0006532":null,"GO:0006533":null,"GO:0006536":null,"GO:0006538":null,"GO:0006761":null,"GO:0009257":null,"GO:0009423":null,"GO:0010133":null,"GO:0019544":null,"GO:0019676":null,"GO:0046452":null,"GO:0046655":null,"GO:0046656":null,"GO:0097054":null}}


id: PBO:0062569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AH member 1 pseudogene","termid":"PBO:0062569"}


id: MONDO:0008479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of skeletal dysplasia associated with short stature, developmental coxa vara, progressive hip deformity, simulated 'corner fractures' of long tubular bones and vertebral body abnormalities (mostly oval vertebral bodies).","definition_xrefs":["Orphanet:93315"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete type 2 collagen-related bone disorder (obsolete MONDO:0019686)","termid":"MONDO:0019686"},{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"},{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylometaphyseal dysplasia, 'corner fracture' type","secondary_identifiers":["MEDGEN:98146","UMLS:C0432221","OMIM:184255","MESH:C535793","SCTID:254078005","icd11.foundation:1295452752","GARD:4991","DOID:0112297"],"synonyms":[{"name":"SMDCF","type":"related"},{"name":"Sutcliffe SmD","type":"related"},{"name":"Sutcliffe type of spondylometaphyseal dysplasia","type":"related"},{"name":"spondylometaphyseal dysplasia Sutcliffe type","type":"related"},{"name":"spondylometaphyseal dysplasia corner fracture type","type":"related"},{"name":"spondylometaphyseal dysplasia, Sutcliffe type","type":"exact"},{"name":"spondylometaphyseal dysplasia, corner fracture type","type":"related"}],"termid":"MONDO:0008479","xrefs":{"Monarch":{"xref_id":"0008479"}}}


id: PBO:0042982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 8","termid":"PBO:0042982"}


id: PBO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine synthetase","termid":"PBO:0004833"}


id: GO:0061923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + (2S,3R,6S,9S)-(-)-protoillud-7-ene.","definition_xrefs":["PMID:27862766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(2S,3R,6S,9S)-(-)-protoillud-7-ene synthase activity","synonyms":[{"name":"protoillud-7-ene synthase activity","type":"related"}],"termid":"GO:0061923"}


id: MONDO:0020284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete heart position anomaly (obsolete MONDO:0020284)","secondary_identifiers":["Orphanet:98716"],"termid":"MONDO:0020284","xrefs":{"Monarch":{"xref_id":"0020284"}}}


id: MONDO:0002636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the accessory XI nerve.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accessory nerve disorder","secondary_identifiers":["NCIT:C26953","SCTID:84759007","UMLS:C0152180","DOID:339","MESH:D020436","MEDGEN:57512","ICD9:352.4"],"synonyms":[{"name":"accessory XI nerve disease","type":"exact"},{"name":"accessory XI nerve disease or disorder","type":"exact"},{"name":"accessory nerve disorder","type":"exact"},{"name":"disease of accessory XI nerve","type":"exact"},{"name":"disease or disorder of accessory XI nerve","type":"exact"},{"name":"disorder of 11th nerve","type":"exact"},{"name":"disorder of accessory XI nerve","type":"exact"},{"name":"disorder of accessory [11th] nerve","type":"exact"},{"name":"disorder of accessory nerve","type":"exact"},{"name":"disorder of the 11th nerve","type":"exact"},{"name":"eleventh nerve disorder","type":"exact"}],"termid":"MONDO:0002636","xrefs":{"Monarch":{"xref_id":"0002636"}}}


id: MONDO:0019603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopenia-myopia-hearing loss-intellectual disability-facial dysmorphism syndrome is characterized by severe hypertelorism, brachycephaly, abnormal ears, sloping shoulders, enamel hypoplasia, osteopaenia with frequent fractures, severe myopia, mild to moderate sensorineural hearing loss and mild intellectual deficit. It has been described in two brothers born to first-cousin parents. No chromosomal anomalies were detected. Transmission appears to be autosomal recessive or X-linked.","definition_xrefs":["Orphanet:91133"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopenia-myopia-hearing loss-intellectual disability-facial dysmorphism syndrome","secondary_identifiers":["MEDGEN:928492","SCTID:722111004","UMLS:C4302823"],"termid":"MONDO:0019603","xrefs":{"Monarch":{"xref_id":"0019603"}}}


id: PBO:0035743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_plus-end","termid":"PBO:0035743"}


id: PBO:0079895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 4","termid":"PBO:0079895"}


id: PBO:0081939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger HIT-type containing 2","termid":"PBO:0081939"}


id: MONDO:0018678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"polyclonal hyperviscosity syndrome","secondary_identifiers":["Orphanet:450322","GARD:21887","ICD10CM:D89.0","MEDGEN:1814466","UMLS:C5681102"],"termid":"MONDO:0018678","xrefs":{"Monarch":{"xref_id":"0018678"}}}


id: GO:0102904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = germacrene C + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"germacrene C synthase activity","secondary_identifiers":["RHEA:28302","MetaCyc:RXN-8561"],"termid":"GO:0102904"}


id: PBO:0000689
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEven Binding","termid":"PBO:0000689"}


id: GO:0090189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.","definition_xrefs":["GOC:dph","GOC:tb","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"branching involved in ureteric bud morphogenesis","termid":"GO:0001658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in ureteric bud morphogenesis","termid":"GO:0090189"}


id: MOD:00054
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N-acetyl-L-glutamine.","definition_xrefs":["RESID:AA0045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-glutamine","synonyms":[{"name":"(2S)-2-acetamido-5-pentanediamic acid","type":"exact"},{"name":"2-acetylamino-5-amino-5-oxopentanoic acid","type":"exact"},{"name":"2-acetylamino-5-pentanediamic acid","type":"exact"},{"name":"2-acetylazanyl-5-azanyl-5-oxopentanoic acid","type":"exact"},{"name":"AcGln","type":"exact"},{"name":"N-acetyl-L-glutamine","type":"exact"},{"name":"N-acetylated L-glutamine","type":"exact"},{"name":"acetylglutamine","type":"exact"}],"termid":"MOD:00054"}


id: GO:0018149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between or within protein chains.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide cross-linking","termid":"GO:0018149"}


id: PBO:0005808
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the chromatin assembly function of H2Bub is independent of H3K4 methylation","termid":"PBO:0005808"}


id: PR:O94349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC61.05 gene.","definition_xrefs":["UniProtKB:O94349","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C61.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC61.05","synonyms":[{"name":"Spom972h-SPCC61.05","type":"exact"}],"termid":"PR:O94349"}


id: MONDO:0009399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperphosphatemia, polyuria, and seizures","secondary_identifiers":["MESH:C565494","UMLS:C1855922","MEDGEN:343444","OMIM:239350"],"synonyms":[{"name":"hyperphosphatemia, polyuria, and seizures","type":"exact"}],"termid":"MONDO:0009399","xrefs":{"Monarch":{"xref_id":"0009399"}}}


id: FYPO:0001804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to caffeine. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cell lysis during cellular response to caffeine (obsolete FYPO:0001804)","synonyms":[{"name":"cell lysis during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to caffeine","type":"exact"},{"name":"inviable, lysed cell during cellular response to caffeine","type":"exact"},{"name":"lysed cell in response to caffeine","type":"exact"}],"termid":"FYPO:0001804"}


id: PBO:0028104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_galactose_carbon_source","termid":"PBO:0028104"}


id: PBO:0071135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 137","termid":"PBO:0071135"}


id: PBO:0053486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 461","termid":"PBO:0053486"}


id: GO:0075151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075151)","synonyms":[{"name":"positive regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075151"}


id: MONDO:0018060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital deficiencies of fibrinogen are coagulation disorders characterized by bleeding symptoms ranging from mild to severe resulting from reduced quantity and/or quality of circulating fibrinogen. Afibrinogenemia (complete absence of fibrinogen) and hypofibrinogenemia (reduced plasma fibrinogen concentration) correspond to quantitative anomalies of fibrinogen while dysfibrinogenemia corresponds to a functional anomaly of fibrinogen. Hypo- and dysfibrinogenemia may be frequently combined (hypodysfibrinogenemia).","definition_xrefs":["Orphanet:335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital fibrinogen deficiency","secondary_identifiers":["MEDGEN:412157","GARD:2320","UMLS:C2062367","icd11.foundation:1452989457"],"synonyms":[{"name":"congenital fibrinogen deficiency","type":"exact"},{"name":"fibrinogen deficiency, congenital","type":"related"}],"termid":"MONDO:0018060","xrefs":{"Monarch":{"xref_id":"0018060"}}}


id: PBO:0030259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_chloramphenicol","termid":"PBO:0030259"}


id: MONDO:0005827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome characterized by almost complete absence of body fat, accentuated muscularity, insulin-resistant diabetes, hyperlipidemia, hepatomegaly, and hypermetabolism.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus","termid":"MONDO:0005148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005015","MONDO:0005066"],"is_obsolete":false,"name":"lipoatrophic diabetes","secondary_identifiers":["NCIT:C34537","NANDO:2200465","UMLS:C0011859","SCTID:127012008","SCTID:71325002","DOID:11712","MESH:D003923","MEDGEN:4256","EFO:0007346"],"synonyms":[{"name":"diabete, lipoatrophic","type":"exact"},{"name":"diabetes, lipoatrophic","type":"related"},{"name":"lipoatrophic diabete","type":"related"},{"name":"lipoatrophic diabetes","type":"exact"},{"name":"lipoatrophic diabetes mellitus","type":"related"}],"termid":"MONDO:0005827","xrefs":{"Monarch":{"xref_id":"0005827"}}}


id: PBO:0027082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027082"}


id: FYPO:0003785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"aseptate mononucleate vegetative cell","synonyms":[{"name":"aseptate mononucleate cell during vegetative growth","type":"exact"},{"name":"aseptate mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"mononucleate aseptate vegetative cell","type":"exact"},{"name":"unseptated mononucleate vegetative cell","type":"exact"}],"termid":"FYPO:0003785"}


id: MONDO:0012611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by polyhydramnios, distinctive craniofacial features, infantile-onset epilepsy, hypotonia, macrocephaly, and global developmental delay that has material basis in homozygous mutation in the STRADA gene on chromosome 17q23.3.","definition_xrefs":["DOID:0070511"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"polyhydramnios, megalencephaly, and symptomatic epilepsy","secondary_identifiers":["MEDGEN:370203","OMIM:611087","Orphanet:500533","GARD:12913","UMLS:C1970203","MESH:C567020"],"synonyms":[{"name":"PMSE","type":"related"},{"name":"PMSE syndrome","type":"exact"},{"name":"polyhydramnios, megalencephaly, and symptomatic epilepsy","type":"exact"},{"name":"polyhydramnios, megalencephaly, and symptomatic epilepsy syndrome","type":"related"},{"name":"polyhydramnios-megalencephaly-symptomatic epilepsy syndrome","type":"related"},{"name":"pretzel syndrome","type":"related"}],"termid":"MONDO:0012611","xrefs":{"Monarch":{"xref_id":"0012611"}}}


id: PBO:0048462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase I feedback regulator","termid":"PBO:0048462"}


id: PBO:0075206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 18","termid":"PBO:0075206"}


id: SO:0001278
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1-methylinosine is a modified inosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_inosine","termid":"SO:0001274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methylinosine","secondary_identifiers":["RNAMOD:018"],"synonyms":[{"name":"1-methylinosine","type":"exact"},{"name":"m1I","type":"exact"},{"name":"one methylinosine","type":"exact"}],"termid":"SO:0001278"}


id: PR:000027543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor ste11 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Pat1 kinase. Example: UniProtKB:P36631-1, Thr-173, MOD:00047|Ser-218, MOD:00046.","definition_xrefs":["PMID:11702950","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor ste11","termid":"PR:000027538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ste11/Phos(T173,S218)","pombase_gene_id":"SPBC32C12.02","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription factor ste11 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ste11/Phos:1","type":"exact"},{"name":"ste11/Phos(T173,S218)","type":"exact"}],"termid":"PR:000027543"}


id: GO:0021853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of GABAergic interneuron precursors from the subpallium to the cerebral cortex.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GOC:jid","PMID:12626695","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interneuron migration from the subpallium to the cortex","termid":"GO:0021830"},{"relation_name":"is_a","term_name":"interneuron migration","termid":"GO:1904936"},{"relation_name":"part_of","term_name":"cerebral cortex GABAergic interneuron development","termid":"GO:0021894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex GABAergic interneuron migration","termid":"GO:0021853"}


id: GO:0031578
data:
  {"annotated_genes":["SJAG_04943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80716],"is_not":false,"summary":null,"term":"GO:0031578"}]},"cv_name":"biological_process","definition":"A signaling process that monitors and signals errors in the placement or orientation of the spindle in the cell. This delays the completion of anaphase until errors are corrected.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:14616062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exit from mitosis","termid":"GO:0001100"},{"relation_name":"is_a","term_name":"mitotic spindle checkpoint signaling","termid":"GO:0071174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044772","GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"mitotic spindle orientation checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0072483"],"synonyms":[{"name":"SOC","type":"exact"},{"name":"SPOC","type":"exact"},{"name":"mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"mitotic spindle orientation checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"spindle position checkpoint","type":"exact"}],"termid":"GO:0031578","terms_by_termid":{"GO:0031578":null}}


id: GO:0010658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a striated muscle cell and result in its death. Striated muscle cells make up striated muscle fibers which are divided by transverse bands into striations.","definition_xrefs":["GOC:tb","GOC:mtg_apoptosis","CL:0000737","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell apoptotic process","synonyms":[{"name":"striated muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010658"}


id: MONDO:0020253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with a symptomatic strabismus (obsolete MONDO:0020253)","secondary_identifiers":["Orphanet:98683"],"termid":"MONDO:0020253","xrefs":{"Monarch":{"xref_id":"0020253"}}}


id: PBO:0066620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIB43A domain with coiled-coils 2","termid":"PBO:0066620"}


id: MONDO:0009380
data:
  {"annotated_genes":["SJAG_01344","SJAG_05213","SJAG_03785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87120,87121,87122],"is_not":false,"summary":null,"term":"MONDO:0009380"}]},"cv_name":"mondo","definition":"Dubin-Johnson syndrome (DJS) is a benign, inherited liver disorder characterized clinically by chronic, predominantly conjugated, hyperbilirubinemia and histopathologically by black-brown pigment deposition in parenchymal liver cells.","definition_xrefs":["Orphanet:234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary hyperbilirubinemia","termid":"MONDO:0002408"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Dubin-Johnson syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10013800","OMIM:237500","SCTID:44553005","DOID:12308","GARD:2793","icd11.foundation:1691610999","MEDGEN:7181","MESH:D007566","UMLS:C0022350","NCIT:C34741"],"synonyms":[{"name":"DJS","type":"related"},{"name":"Dubin Johnson Syndrome","type":"exact"},{"name":"Dubin Johnson syndrome","type":"exact"},{"name":"Dubin-Johnson syndrome","type":"exact"},{"name":"Dubin-Sprinz disease","type":"exact"},{"name":"Sprinz-Nelson syndrome","type":"exact"},{"name":"chronic idiopathic jaundice","type":"exact"},{"name":"conjugated hyperbilirubinemia","type":"related"},{"name":"hyperbilirubinemia 2","type":"related"},{"name":"hyperbilirubinemia type 2","type":"exact"},{"name":"hyperbilirubinemia, Dubin-Johnson type","type":"related"}],"termid":"MONDO:0009380","terms_by_termid":{"MONDO:0009380":null},"xrefs":{"Monarch":{"xref_id":"0009380"}}}


id: PBO:0053366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 278","termid":"PBO:0053366"}


id: FYPO:0005928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the polyubiquitination of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein ubiquitination during vegetative growth","termid":"FYPO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein polyubiquitination during vegetative growth","synonyms":[{"name":"abolished protein polyubiquitination during mitotic cell cycle","type":"related"},{"name":"abolished protein polyubiquitinylation during vegetative growth","type":"related"},{"name":"abolished protein polyubiquitylation during vegetative growth","type":"exact"},{"name":"protein polyubiquitination abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005928"}


id: MONDO:0013819
data:
  {"annotated_genes":["SJAG_02254"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88096],"is_not":false,"summary":null,"term":"MONDO:0013819"}]},"cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the ARID1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614607","UMLS:C3553247","GARD:15820","DOID:0070044","MEDGEN:766161"],"synonyms":[{"name":"ARID1A Coffin-Siris syndrome","type":"exact"},{"name":"ARID1A-related BAFopathy","type":"exact"},{"name":"COFFIN-SIRIS syndrome 2","type":"related"},{"name":"CSS2","type":"exact"},{"name":"Coffin-Siris syndrome 2","type":"related"},{"name":"Coffin-Siris syndrome caused by mutation in ARID1A","type":"exact"},{"name":"MRD14","type":"exact"},{"name":"autosomal dominant intellectual disability 14","type":"exact"},{"name":"autosomal dominant mental retardation 14","type":"exact"},{"name":"intellectual disability, autosomal dominant 14","type":"exact"},{"name":"intellectual disability, autosomal dominant type 14","type":"exact"},{"name":"mental retardation, autosomal dominant 14","type":"related"},{"name":"mental retardation, autosomal dominant type 14","type":"exact"}],"termid":"MONDO:0013819","terms_by_termid":{"MONDO:0013819":null},"xrefs":{"Monarch":{"xref_id":"0013819"}}}


id: PBO:0042070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 138","termid":"PBO:0042070"}


id: PBO:0039722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3C","termid":"PBO:0039722"}


id: MOD:00229
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues to form alpha-1-microglobulin-Ig alpha complex chromophore.","definition_xrefs":["PubMed:7535251","PubMed:7506257","PubMed:11877257","PubMed:11058759","RESID:AA0224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"alpha-1-microglobulin-Ig alpha complex chromophore","synonyms":[{"name":"BINDING Multimeric 3-hydroxykynurenine chromophore (covalent)","type":"exact"},{"name":"alpha-1-microglobulin-Ig alpha complex chromophore","type":"exact"}],"termid":"MOD:00229"}


id: PBO:0045192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 5","termid":"PBO:0045192"}


id: PR:O14123
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sod22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Na(+)/H(+) antiporter C3A11.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.09","synonyms":[{"name":"Spom972h-sod22","type":"exact"}],"termid":"PR:O14123"}


id: PBO:0029016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-centromeric_outer_repeat_transcript-derived_siRNA_absent","termid":"PBO:0029016"}


id: GO:0016358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.","definition_xrefs":["GOC:bc","ISBN:0198506732","GOC:jl","PMID:22683681","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite development","termid":"GO:0016358"}


id: PBO:0004155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Chr1 (predicted)","termid":"PBO:0004155"}


id: GO:0043526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss.","definition_xrefs":["GOC:mtg_apoptosis","MSH:D017209","PMID:10208444","PMID:11909981","PMID:15905876"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroprotection (obsolete GO:0043526)","secondary_identifiers":["Wikipedia:Neuroprotection"],"synonyms":[{"name":"neuroprotection","type":"exact"}],"termid":"GO:0043526"}


id: PBO:0112867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 lysine methyltransferase Set3","termid":"PBO:0112867"}


id: GO:0071356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor necrosis factor","termid":"GO:0034612"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tumor necrosis factor","synonyms":[{"name":"cellular response to TNF","type":"exact"}],"termid":"GO:0071356"}


id: PBO:0048053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 2","termid":"PBO:0048053"}


id: FYPO:0003002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is decreased during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during mitotic metaphase","termid":"FYPO:0006175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to centromere during mitotic metaphase","synonyms":[{"name":"decreased protein localisation to centromere during mitotic metaphase","type":"exact"},{"name":"decreased protein localisation to chromosome, centromeric region during mitotic metaphase","type":"exact"},{"name":"decreased protein localization to centromere during metaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome, centric region during mitotic metaphase","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric region during mitotic metaphase","type":"exact"},{"name":"reduced protein localization to centromere during mitotic metaphase","type":"exact"}],"termid":"FYPO:0003002"}


id: PBO:0063065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase 4 (inactive)","termid":"PBO:0063065"}


id: PBO:0056739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl aminopeptidase 2","termid":"PBO:0056739"}


id: MONDO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the apocrine sweat gland.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"apocrine sweat gland disorder","termid":"MONDO:0024467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hidradenitis","secondary_identifiers":["ICD9:705.83","DOID:2282","SCTID:69741000","MEDGEN:43115","MESH:D016575","NCIT:C32132","UMLS:C0085160"],"synonyms":[{"name":"Hydradenitis","type":"exact"},{"name":"apocrine sweat gland","type":"exact"},{"name":"apocrine sweat gland inflammation","type":"exact"},{"name":"inflammation of apocrine sweat gland","type":"exact"}],"termid":"MONDO:0002260","xrefs":{"Monarch":{"xref_id":"0002260"}}}


id: GO:0034089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sister chromatids of a replicated chromosome become joined along the entire length of the chromosome during S phase during a meiotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of sister chromatid cohesion","termid":"GO:0034085"},{"relation_name":"part_of","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"establishment of meiotic sister chromatid cohesion","termid":"GO:0034089"}


id: MONDO:0019337
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"An autoimmune disease characterized by blisters on the skin.","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"autoimmune bullous skin disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0008598","ICD9:694.8","ICD9:694.9","Orphanet:79669","SCTID:7231009","UMLS:C5681494","GARD:19028","MEDGEN:1842418","DOID:8502"],"synonyms":[{"name":"bullous dermatosis","type":"related"},{"name":"bullous skin disease","type":"broad"}],"termid":"MONDO:0019337","terms_by_termid":{"MONDO:0008218":null},"xrefs":{"Monarch":{"xref_id":"0019337"}}}


id: PBO:0080861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 2","termid":"PBO:0080861"}


id: PBO:0003374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex assembly protein Mim1 (predicted)","termid":"PBO:0003374"}


id: PBO:0043316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 6","termid":"PBO:0043316"}


id: PATO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed laterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral orientation","synonyms":[{"name":"laterally directed","type":"exact"}],"termid":"PATO:0002497"}


id: PBO:0003332
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CocKayNe syndrome 1","termid":"PBO:0003332"}


id: PBO:0113286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A)RNA binding protein involved in nuclear mRNA export; component of the nuclear pore and nuclear RNA export factor; ubiquitin-associated (UBA) domain interacts with Mip6p; ortholog of human TAP","termid":"PBO:0113286"}


id: PBO:0042758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 20","termid":"PBO:0042758"}


id: PBO:0077594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 5","termid":"PBO:0077594"}


id: GO:0010682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of flavonoids.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in flavonoid metabolism (obsolete GO:0010682)","termid":"GO:0010682"}


id: MONDO:0019205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The association of amelogenesis imperfecta and a microscopically typical hair dysplasia has been found in several members of a family in two generations. Transmission is X-linked.","definition_xrefs":["Orphanet:79129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichodysplasia-amelogenesis imperfecta syndrome","secondary_identifiers":["UMLS:C4304344","GARD:18943","MEDGEN:930013"],"termid":"MONDO:0019205","xrefs":{"Monarch":{"xref_id":"0019205"}}}


id: SO:0001805
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved polypeptide motif that can be recognized by both Fizzy/Cdc20- and FZR/Cdh1-activated anaphase-promoting complex/cyclosome (APC/C) and targets a protein for ubiquitination and subsequent degradation by the APC/C. The consensus sequence is RXXLXXXXN.","definition_xrefs":["PMID:12208841","PMID:1842691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_motif","termid":"SO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"destruction_box","synonyms":[{"name":"D-box","type":"exact"},{"name":"destruction box","type":"exact"}],"termid":"SO:0001805"}


id: PBO:0041804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 14","termid":"PBO:0041804"}


id: GO:0071702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of organic substances into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore. An organic substance is a molecular entity that contains carbon.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance transport (obsolete GO:0071702)","termid":"GO:0071702"}


id: PBO:0081027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 8","termid":"PBO:0081027"}


id: GO:0140950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone deubiquitinase that cleaves ubiquitin from a histone H2A protein to which it is conjugated.","definition_xrefs":["PMID:20436459","PMID:18226187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deubiquitinase activity","termid":"GO:0140934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016787","GO:0003824","GO:0008233"],"is_obsolete":false,"name":"histone H2A deubiquitinase activity","synonyms":[{"name":"histone H2A deubiquitination","type":"related"}],"termid":"GO:0140950"}


id: PBO:0055387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2817","termid":"PBO:0055387"}


id: FYPO:0005162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to salt stress is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to osmotic stress","termid":"FYPO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during cellular response to salt stress","synonyms":[{"name":"increased RNA accumulation during cellular response to salt stress","type":"related"},{"name":"increased RNA level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to salt stress","type":"narrow"},{"name":"increased transcript level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0005162"}


id: MONDO:1011560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephroma that occurs in ducks.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"nephroma, non-human animal","termid":"MONDO:1011438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephroma, ducks","secondary_identifiers":["OMIA:001113-8835"],"termid":"MONDO:1011560","xrefs":{"Monarch":{"xref_id":"1011560"}}}


id: _global:guided_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guided_by","termid":"_global:guided_by"}


id: GO:0019407
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hexitols, any alditol with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"},{"relation_name":"is_a","term_name":"alditol catabolic process","termid":"GO:0019405"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"hexitol catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"hexitol breakdown","type":"exact"},{"name":"hexitol catabolism","type":"exact"},{"name":"hexitol degradation","type":"exact"}],"termid":"GO:0019407","terms_by_termid":{"GO:0006062":null}}


id: PBO:0064633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG coactivator 1 beta","termid":"PBO:0064633"}


id: MONDO:0002846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastritis that is associated with the presence of granulomas.","definition_xrefs":["NCIT:C27348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"granulomatous gastritis","secondary_identifiers":["UMLS:C1112577","DOID:4038","MEDGEN:207272"],"synonyms":[{"name":"granulomatous gastritis","type":"exact"}],"termid":"MONDO:0002846","xrefs":{"Monarch":{"xref_id":"0002846"}}}


id: MONDO:0001385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Visual impairment due to visual cortex dysfunction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"},{"relation_name":"is_a","term_name":"visual cortex disorder","termid":"MONDO:0003584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical blindness","secondary_identifiers":["MESH:D019575","NCIT:C118707","UMLS:C0155320","ICD9:377.75","MEDGEN:57834","DOID:11831","SCTID:68574006"],"synonyms":[{"name":"CVI","type":"exact"},{"name":"cerebral visual impairment","type":"exact"},{"name":"cortical visual impairment","type":"exact"},{"name":"cortical/cerebral visual impairment","type":"exact"}],"termid":"MONDO:0001385","xrefs":{"Monarch":{"xref_id":"0001385"}}}


id: PR:O60169
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19F8.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19F8.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.05","synonyms":[{"name":"Spom972h-SPBC19F8.05","type":"exact"}],"termid":"PR:O60169"}


id: GO:0035772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-13 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-13","termid":"GO:0035963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-13-mediated signaling pathway","synonyms":[{"name":"IL-13-mediated signaling pathway","type":"exact"},{"name":"interleukin-13-mediated signalling pathway","type":"exact"}],"termid":"GO:0035772"}


id: PBO:0072011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 13","termid":"PBO:0072011"}


id: GO:0102499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hydrogenphosphate + a plant soluble heteroglycan = alpha-D-glucose 1-phosphate + a plant soluble heteroglycan.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete SHG alpha-glucan phosphorylase activity (obsolete GO:0102499)","termid":"GO:0102499"}


id: PBO:0047253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 240 member A","termid":"PBO:0047253"}


id: FYPO:0004190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to ionizing radiation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during cellular response to ionizing radiation","synonyms":[{"name":"decreased protein accumulation during cellular response to ionizing radiation","type":"related"},{"name":"decreased protein level during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004190"}


id: MONDO:0013479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the BAG3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1HH","secondary_identifiers":["OMIM:613881","UMLS:C3151293","MEDGEN:462643","GARD:15726","DOID:0110448"],"synonyms":[{"name":"BAG3 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"CMD1HH","type":"exact"},{"name":"cardiomyopathy, dilated, 1HH","type":"related"},{"name":"cardiomyopathy, dilated, type 1Hh","type":"exact"},{"name":"dilated cardiomyopathy type 1HH","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in BAG3","type":"exact"}],"termid":"MONDO:0013479","xrefs":{"Monarch":{"xref_id":"0013479"}}}


id: MOD:00462
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to L-kynurenine.","definition_xrefs":["OMSSA:66","PubMed:9252331","Unimod:351#W","DeltaMass:357","PubMed:11029593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-kynurenine","synonyms":[{"name":"(2S)-2-amino-4-(2-aminophenyl)-4-oxo-butanoic acid","type":"exact"},{"name":"Trp->Kynurenin","type":"related"},{"name":"kynureninw","type":"exact"},{"name":"tryptophan oxidation to kynurenin","type":"related"}],"termid":"MOD:00462"}


id: PBO:0034328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends","termid":"PBO:0034328"}


id: GO:0043425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a basic Helix-Loop-Helix (bHLH) superfamily of transcription factors, important regulatory components in transcriptional networks of many developmental pathways.","definition_xrefs":["PMID:9144210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor binding","termid":"GO:0140297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"bHLH transcription factor binding","termid":"GO:0043425"}


id: GO:0034078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of butanediol; the biologically relevant isomer is 2,3-butanediol, CH3CH(OH)CH(OH)CH3.","definition_xrefs":["ISBN:0911910123","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanediol metabolic process","termid":"GO:0034077"},{"relation_name":"is_a","term_name":"glycol catabolic process","termid":"GO:0042846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butanediol catabolic process","synonyms":[{"name":"butanediol breakdown","type":"exact"},{"name":"butanediol catabolism","type":"exact"},{"name":"butanediol degradation","type":"exact"},{"name":"butanediol utilization","type":"related"},{"name":"butylene glycol catabolic process","type":"exact"},{"name":"butylene glycol catabolism","type":"exact"}],"termid":"GO:0034078"}


id: MONDO:0008066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal hyperpigmentation, familial transverse","secondary_identifiers":["OMIM:161530","UMLS:C1834369","MEDGEN:331727"],"synonyms":[{"name":"nasal hyperpigmentation, familial transverse","type":"exact"}],"termid":"MONDO:0008066","xrefs":{"Monarch":{"xref_id":"0008066"}}}


id: PBO:0066503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X1","termid":"PBO:0066503"}


id: PBO:0017408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-improper_part_of","termid":"PBO:0017408"}


id: PBO:0036552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prephenate dehydrogenase Tyr1","termid":"PBO:0036552"}


id: PBO:0027411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_thioredoxin_peroxidase_activity","termid":"PBO:0027411"}


id: GO:0034969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by addition of a methyl group to an arginine residue.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone arginine methylation (obsolete GO:0034969)","termid":"GO:0034969"}


id: PBO:0062559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 6 (gene/pseudogene)","termid":"PBO:0062559"}


id: FYPO:0002614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"},{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal vacuole organization during vegetative growth","termid":"FYPO:0000812"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to pre-autophagosomal structure","synonyms":[{"name":"abnormal protein localisation to PAS","type":"exact"},{"name":"abnormal protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"abnormal protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002614"}


id: PBO:0084919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Molecular chaperone of the endoplasmic reticulum lumen; involved in polypeptide translocation and folding; nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p; regulated by the unfolded protein response pathway","termid":"PBO:0084919"}


id: MONDO:0012675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corticosteroid-binding globulin deficiency is a genetic disorder characterized by extreme tiredness (fatigue), particularly after physical exertion, and low blood pressure (hypotension). Corticosteroid-binding globulin (CBG) is a protein primarily produced in the liver that attaches to cortisol, a hormone with numerous functions, including maintaining blood sugar levels, protecting the body from stress, and suppressing inflammation.When cortisol is needed in the body, CBG delivers the cortisol where it is needed and releases it. Signs and symptoms of CBG deficiency vary. While some individuals may experience no symptoms, others are found to have a fatty liver and chronic pain. Some people with CBG deficiency also have chronic fatigue syndrome. CGB deficiency is caused by mutations in the SERPINA6 gene. The SERPINA6 gene is commonly also referred to as the CBG gene. Both autosomal dominant and autosomal recessive inheritance have been reported.While there is still no cure, treatment options will depend on the type and severity of symptoms present and may involve several specialists.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticosteroid-binding globulin deficiency","secondary_identifiers":["MEDGEN:343831","GARD:13101","OMIM:611489","Orphanet:199247","UMLS:C1852529","DOID:0090030"],"synonyms":[{"name":"CBG deficiency","type":"exact"},{"name":"Cbg deficiency","type":"related"},{"name":"Transcortin deficiency","type":"exact"},{"name":"corticosteroid-binding globulin deficiency","type":"exact"},{"name":"corticosteroid-binding globulin, elevated","type":"related"},{"name":"transcortin deficiency","type":"exact"}],"termid":"MONDO:0012675","xrefs":{"Monarch":{"xref_id":"0012675"}}}


id: PBO:0052823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 89, pseudogene","termid":"PBO:0052823"}


id: PBO:0046348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 6","termid":"PBO:0046348"}


id: GO:0110149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of biomineralization (obsolete GO:0110149)","synonyms":[{"name":"regulation of biomineral formation","type":"narrow"},{"name":"regulation of biomineralisation","type":"exact"},{"name":"regulation of mineralisation","type":"exact"},{"name":"regulation of mineralization","type":"exact"}],"termid":"GO:0110149"}


id: PBO:0083898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of thenuclear pore complex (NPC) permeability barrier; possible karyopherin release factor that accelerates release of karyopherin-cargo complexes after transport across NPC; both NUP1 and NUP60 are homologous to human NUP153","termid":"PBO:0083898"}


id: MONDO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the peritoneum","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"peritoneal neoplasm","termid":"MONDO:0006901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peritoneum cancer","secondary_identifiers":["ICD9:158.9","UMLS:C0153467","ICD9:159.8","SCTID:363492001","DOID:1725","MEDGEN:102270","ICD9:158.8","NCIT:C3538"],"synonyms":[{"name":"cancer of peritoneum","type":"exact"},{"name":"cancer of the peritoneum","type":"exact"},{"name":"malignant neoplasm of peritoneum","type":"exact"},{"name":"malignant peritoneal neoplasm","type":"exact"},{"name":"malignant peritoneum neoplasm","type":"exact"},{"name":"peritoneal cancer","type":"exact"},{"name":"peritoneal cavity cancer","type":"exact"},{"name":"peritoneal neoplasm","type":"related"},{"name":"peritoneum cancer","type":"exact"}],"termid":"MONDO:0002087","xrefs":{"Monarch":{"xref_id":"0002087"}}}


id: GO:0008586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the veins on an imaginal disc-derived wing are generated and organized.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing vein morphogenesis","synonyms":[{"name":"wing vein morphogenesis","type":"exact"}],"termid":"GO:0008586"}


id: PBO:0035740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_ubiquitinated_protein_in_cell_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0035740"}


id: GO:0039690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication process where the template genome is positive stranded, single stranded RNA ((+)ssRNA). Replication of the positive strand leads to dsRNA formation, which in turn is transcribed into positive single stranded RNA.","definition_xrefs":["VZ:1116","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive stranded viral RNA replication","synonyms":[{"name":"ss(+) viral RNA replication","type":"related"}],"termid":"GO:0039690"}


id: MONDO:0011971
data:
  {"annotated_genes":["SJAG_02528"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86888],"is_not":false,"summary":null,"term":"MONDO:0011971"}]},"cv_name":"mondo","definition":"Any hyper-IgM syndrome in which the cause of the disease is a mutation in the UNG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgM syndrome","termid":"MONDO:0003947"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hyper-IgM syndrome type 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060759","MEDGEN:328420","OMIM:608106","UMLS:C1720958","Orphanet:101092","GARD:10581"],"synonyms":[{"name":"HIGM5","type":"exact"},{"name":"UNG hyper-IgM syndrome","type":"exact"},{"name":"hyper IgM syndrome 5","type":"related"},{"name":"hyper-IgM syndrome 5","type":"exact"},{"name":"hyper-IgM syndrome caused by mutation in UNG","type":"exact"},{"name":"hyper-IgM syndrome due to UNG deficiency","type":"exact"},{"name":"hyper-IgM syndrome due to uracil N-glycosylase","type":"exact"},{"name":"hyper-IgM syndrome type 5","type":"exact"},{"name":"immunodeficiency with hyper IgM type 5","type":"related"},{"name":"immunodeficiency with hyper IgM, type 5","type":"exact"},{"name":"immunodeficiency with hyper-IgM, type 5","type":"related"}],"termid":"MONDO:0011971","terms_by_termid":{"MONDO:0011971":null},"xrefs":{"Monarch":{"xref_id":"0011971"}}}


id: GO:0018456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic alcohol + NAD+ = an aromatic aldehyde + NADH + H+.","definition_xrefs":["EC:1.1.1.90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aryl-alcohol dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:12076","MetaCyc:ARYL-ALCOHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"aryl-alcohol:NAD+ oxidoreductase activity","type":"related"},{"name":"benzyl alcohol dehydrogenase activity","type":"narrow"},{"name":"p-hydroxybenzyl alcohol dehydrogenase activity","type":"narrow"}],"termid":"GO:0018456"}


id: MOD:01213
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to an iodoacetamide derivatized histidine, either 1'- or 3'-(carboxamidolmethyl)histidine.","definition_xrefs":["PubMed:12422359","PubMed:11510821","PubMed:15627961","OMSSA:28","PubMed:2026710","Unimod:4#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized histidine","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"},{"name":"carbamidometylh","type":"exact"}],"termid":"MOD:01213"}


id: PBO:0039971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 2","termid":"PBO:0039971"}


id: MONDO:0060642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features","secondary_identifiers":["MEDGEN:1647077","UMLS:C4693405","OMIM:617865"],"synonyms":[{"name":"NEDMAGA","type":"related"},{"name":"neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features","type":"exact"}],"termid":"MONDO:0060642","xrefs":{"Monarch":{"xref_id":"0060642"}}}


id: MONDO:1011046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrolithiasis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis, non-human animal","termid":"MONDO:1010260"},{"relation_name":"is_a","term_name":"urolithiasis, domestic cat","termid":"MONDO:1011080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrolithiasis, domestic cat","secondary_identifiers":["OMIA:000709-9685"],"termid":"MONDO:1011046","xrefs":{"Monarch":{"xref_id":"1011046"}}}


id: GO:0047545
data:
  {"annotated_genes":["SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65942],"is_not":false,"summary":null,"term":"GO:0047545"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxyglutarate + acceptor = 2-oxoglutarate + reduced acceptor.","definition_xrefs":["EC:1.1.99.2","MetaCyc:2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyglutarate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000117":null},"secondary_identifiers":["RHEA:21252","Reactome:R-HSA-880050"],"synonyms":[{"name":"(S)-2-hydroxyglutarate:(acceptor) 2-oxidoreductase","type":"related"},{"name":"(S)-2-hydroxyglutarate:acceptor 2-oxidoreductase","type":"related"},{"name":"L-alpha-hydroxyglutarate dehydrogenase activity","type":"related"},{"name":"L-alpha-hydroxyglutarate:NAD+ 2-oxidoreductase","type":"narrow"},{"name":"alpha-hydroxyglutarate dehydrogenase (NAD+ specific)","type":"narrow"},{"name":"alpha-hydroxyglutarate dehydrogenase activity","type":"related"},{"name":"alpha-hydroxyglutarate oxidoreductase activity","type":"related"},{"name":"hydroxyglutaric dehydrogenase activity","type":"related"}],"termid":"GO:0047545","terms_by_termid":{"GO:0047545":null}}


id: PBO:0073841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 8 member A1","termid":"PBO:0073841"}


id: PBO:0070826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 5","termid":"PBO:0070826"}


id: PBO:0076463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator and scaffold protein tamalin","termid":"PBO:0076463"}


id: PBO:0091461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi3","termid":"PBO:0091461"}


id: GO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-quinate + pyrroloquinoline-quinone = (-)-3-dehydroquinate + pyrroloquinoline-quinol.","definition_xrefs":["RHEA:23672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"quinate dehydrogenase (quinone) activity","secondary_identifiers":["KEGG_REACTION:R01873","MetaCyc:1.1.99.25-RXN","EC:1.1.5.8"],"synonyms":[{"name":"NAD(P)-independent quinate dehydrogenase activity","type":"related"},{"name":"quinate:pyrroloquinoline-quinone 5-oxidoreductase activity","type":"related"},{"name":"quinate:quinone 3-oxidoreductase activity","type":"exact"}],"termid":"GO:0047519"}


id: GO:1900364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["GOC:se","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA polyadenylation (obsolete GO:1900364)","synonyms":[{"name":"negative regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900364"}


id: PBO:0064312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 1","termid":"PBO:0064312"}


id: GO:0052487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the jasmonic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont jasmonic acid-mediated defense response (obsolete GO:0052487)","synonyms":[{"name":"negative regulation by organism of symbiont jasmonic acid-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont JA-mediated defense response","type":"exact"}],"termid":"GO:0052487"}


id: FYPO:0008302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during prophase of the first division of the meiotic cell cycle in which the localization of a protein to discrete regions in the nucleus, visible as foci or dots by microscopy, is abolished.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal punctate nuclear protein localization during meiotic prophase I","termid":"FYPO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished punctate nuclear protein localization during meiotic prophase I","termid":"FYPO:0008302"}


id: PBO:0070604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 72","termid":"PBO:0070604"}


id: PBO:0116606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3130","termid":"PBO:0116606"}


id: PBO:0087635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; required for ribosomal small subunit export from nucleus; required for growth at low temperature","termid":"PBO:0087635"}


id: FYPO:0008325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular phenotype observed in the vegetative growth phase of the life cycle in which the total cytosolic ribosome content (monosomes + polysomes) in a cell is higher than normal.","definition_xrefs":["PMID:39358553","PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cytosolic ribosome content","termid":"FYPO:0008325"}


id: GO:1905513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of short-term synaptic potentiation.","definition_xrefs":["GOC:hjd","GO_REF:0000058","GOC:TermGenie","PMID:15470145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of short-term synaptic potentiation","termid":"GO:1905512"},{"relation_name":"negatively_regulates","term_name":"short-term synaptic potentiation","termid":"GO:1990926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of short-term synaptic potentiation","synonyms":[{"name":"down regulation of short-term synaptic potentiation","type":"exact"},{"name":"down regulation of synaptic facilitation","type":"exact"},{"name":"down-regulation of short-term synaptic potentiation","type":"exact"},{"name":"down-regulation of synaptic facilitation","type":"exact"},{"name":"downregulation of short-term synaptic potentiation","type":"exact"},{"name":"downregulation of synaptic facilitation","type":"exact"},{"name":"inhibition of short-term synaptic potentiation","type":"narrow"},{"name":"inhibition of synaptic facilitation","type":"narrow"},{"name":"negative regulation of synaptic facilitation","type":"exact"}],"termid":"GO:1905513"}


id: PBO:0056784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 1 pseudogene 1","termid":"PBO:0056784"}


id: PBO:0054729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2138","termid":"PBO:0054729"}


id: GO:0043766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + hydrogen sulfide + O-phospho-L-seryl-tRNA(Cys) = L-cysteinyl-tRNA(Cys) + phosphate.","definition_xrefs":["PMID:17110438","PMID:15790858","PMID:16380427","RHEA:25686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0003674","GO:0140101","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"Sep-tRNA:Cys-tRNA synthase activity","secondary_identifiers":["MetaCyc:RXN-10719","EC:2.5.1.73"],"synonyms":[{"name":"O-phosphoseryl-tRNA:cysteinyl-tRNA synthase activity","type":"exact"},{"name":"Sep-tRNA:Cys-tRNA synthetase activity","type":"exact"},{"name":"SepCysS","type":"related"}],"termid":"GO:0043766"}


id: GO:0045984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving pyrimidine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleobase metabolic process","termid":"GO:0006142"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of pyrimidine nucleobase metabolic process","synonyms":[{"name":"down regulation of pyrimidine base metabolic process","type":"exact"},{"name":"down-regulation of pyrimidine base metabolic process","type":"exact"},{"name":"downregulation of pyrimidine base metabolic process","type":"exact"},{"name":"inhibition of pyrimidine base metabolic process","type":"narrow"},{"name":"negative regulation of pyrimidine base metabolic process","type":"exact"},{"name":"negative regulation of pyrimidine base metabolism","type":"exact"}],"termid":"GO:0045984"}


id: GO:0106040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of GABA-A receptor activity","termid":"GO:0106040"}


id: GO:1903761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization.","definition_xrefs":["GO_REF:0000059","GOC:rl","PMID:18337493","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization (obsolete GO:1903761)","synonyms":[{"name":"down regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"down regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"down regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"down-regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"down-regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"downregulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"downregulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"inhibition of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903761"}


id: PR:P87295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16A10.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pep5-like zinc finger protein C16A10.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.03c","synonyms":[{"name":"Spom972h-SPAC16A10.03c","type":"exact"}],"termid":"PR:P87295"}


id: PBO:0108599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-negatively_regulates_characteristic","termid":"PBO:0108599"}


id: MONDO:0018378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An area of necrotic bone in the mandible or maxilla.","definition_xrefs":["NCIT:C63924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary avascular necrosis","termid":"MONDO:0018374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteonecrosis of the jaw","secondary_identifiers":["SCTID:441809006","Orphanet:399293","UMLS:C2711248","GARD:21663","ICD9:733.45","MEDGEN:751019"],"synonyms":[{"name":"ONJ","type":"exact"},{"name":"jaw osteonecrosis","type":"exact"},{"name":"osteonecrosis of jaw","type":"exact"}],"termid":"MONDO:0018378","xrefs":{"Monarch":{"xref_id":"0018378"}}}


id: MONDO:0054781
data:
  {"annotated_genes":["SJAG_03584"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87814],"is_not":false,"summary":null,"term":"MONDO:0054781"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03584":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 36","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111482","OMIM:617950","UMLS:C4693722","MEDGEN:1644927"],"synonyms":[{"name":"COXPD36","type":"related"},{"name":"combined oxidative phosphorylation deficiency 36","type":"exact"}],"termid":"MONDO:0054781","terms_by_termid":{"MONDO:0054781":null},"xrefs":{"Monarch":{"xref_id":"0054781"}}}


id: PR:Q9UTA2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"redox protein fmp46, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.18","synonyms":[{"name":"Spom972h-SPAC25B8.18","type":"exact"}],"termid":"PR:Q9UTA2"}


id: PBO:0078002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3IP2 antisense RNA 1","termid":"PBO:0078002"}


id: PBO:0005903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Alanine, mitochondrial","termid":"PBO:0005903"}


id: PBO:0057116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 202","termid":"PBO:0057116"}


id: MONDO:0017170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic recurrent stupor is a rare neurologic disease characterized by unpredictable, transient and spontaneous unresponsiveness lasting from hours to days, with a frequency of three to seven attacks per year, in the absence of readily discernible toxic, metabolic or structural causes.","definition_xrefs":["Orphanet:276174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic recurrent stupor","secondary_identifiers":["icd11.foundation:1473114049","MEDGEN:1645620","GARD:21045","UMLS:C4706562","SCTID:763739002"],"termid":"MONDO:0017170","xrefs":{"Monarch":{"xref_id":"0017170"}}}


id: FYPO:0006631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin","synonyms":[{"name":"decreased protein localisation to chromatin","type":"exact"},{"name":"reduced protein localization to chromatin","type":"exact"}],"termid":"FYPO:0006631"}


id: MONDO:1011308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital nervous system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308","xrefs":{"Monarch":{"xref_id":"1011308"}}}


id: FYPO:0000410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more cell cycle phases is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle phase","termid":"FYPO:0002735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of cell cycle phase","synonyms":[{"name":"cell cycle progression: increased rate","type":"related"},{"name":"increased rate of cell cycle progression","type":"related"},{"name":"reduced duration of cell cycle phase","type":"exact"}],"termid":"FYPO:0000410"}


id: MOD:00926
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from Unimod Non-standard residue. OBSOLETE because not an amino acid modification. From Unimod not an approved entry.","definition_xrefs":["Unimod:493","PubMed:11225353"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00926 Bisphenol A diglycidyl ether derivative (obsolete MOD:00926)","synonyms":[{"name":"BADGE","type":"related"},{"name":"Bisphenol A diglycidyl ether derivative","type":"related"}],"termid":"MOD:00926"}


id: PBO:0090000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase Rbk1","termid":"PBO:0090000"}


id: GO:0106429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:11-cis-retinol-[retinal-binding-protein] + NAD+ = 11-cis-retinal-[retinol-binding-protein] + NADH.","definition_xrefs":["RHEA:55668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"11-cis-retinol dehydrogenase","secondary_identifiers":["EC:1.1.1.315"],"termid":"GO:0106429"}


id: PBO:0041573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 204","termid":"PBO:0041573"}


id: PBO:0074029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 17","termid":"PBO:0074029"}


id: GO:0018555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene + NADH + H+ + O2 = NAD+ + cis-3,4-dihydroxy-3,4-dihydrophenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0455"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene dioxygenase activity (obsolete GO:0018555)","termid":"GO:0018555"}


id: FYPO:0000105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cyclosporin A. Cells stop growing (and may die) at a concentration of cyclosporin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to cyclosporin A","synonyms":[{"name":"hypersensitive to cyclosporin A","type":"exact"},{"name":"sensitive to cyclosporin A during mitotic cell cycle","type":"related"},{"name":"sensitive to cyclosporin A during vegetative growth","type":"exact"},{"name":"sensitive to cyclosporine","type":"exact"}],"termid":"FYPO:0000105"}


id: GO:1905432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bf","PMID:19448629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trans-synaptic signaling","termid":"GO:0099177"},{"relation_name":"regulates","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of retrograde trans-synaptic signaling by neuropeptide","synonyms":[{"name":"regulation of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"}],"termid":"GO:1905432"}


id: PATO:0000571
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000571 absolute length value (obsolete PATO:0000571)","termid":"PATO:0000571"}


id: PBO:0048422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger domain containing 2B","termid":"PBO:0048422"}


id: GO:1900683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumonisin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"fumonisin biosynthetic process","termid":"GO:1900541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of fumonisin biosynthetic process","synonyms":[{"name":"regulation of fumonisin anabolism","type":"exact"},{"name":"regulation of fumonisin biosynthesis","type":"exact"},{"name":"regulation of fumonisin formation","type":"exact"},{"name":"regulation of fumonisin synthesis","type":"exact"}],"termid":"GO:1900683"}


id: PBO:0068402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 220","termid":"PBO:0068402"}


id: PBO:0047467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 6 pseudogene 1","termid":"PBO:0047467"}


id: GO:0051881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"}


id: GO:0100038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates cellular response to oxidative stress.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular response to oxidative stress by transcription from RNA polymerase II promoter (obsolete GO:0100038)","termid":"GO:0100038"}


id: PBO:0081866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 804B","termid":"PBO:0081866"}


id: GO:1902456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stomatal opening.","definition_xrefs":["GOC:TermGenie","PMID:23766366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stomatal movement","termid":"GO:0010119"},{"relation_name":"regulates","term_name":"stomatal opening","termid":"GO:1990069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomatal opening","termid":"GO:1902456"}


id: PBO:0075017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-28","termid":"PBO:0075017"}


id: PBO:0012054
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as Ino80 complex subunit, possibly incorrect","termid":"PBO:0012054"}


id: PBO:0039443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and KH domain containing 1","termid":"PBO:0039443"}


id: GO:1903958
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of nitric-oxide synthase activity.","definition_xrefs":["PMID:25417112","GOC:TermGenie","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nitric-oxide synthase complex","synonyms":[{"name":"iNOS-S100A8/A9 complex","type":"narrow"}],"termid":"GO:1903958"}


id: GO:0036299
data:
  {"annotated_genes":["SJAG_00727"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91418],"is_not":false,"summary":null,"term":"GO:0036299"}]},"cv_name":"biological_process","definition":"Removal of a DNA interstrand crosslink (a covalent attachment of DNA bases on opposite strands of the DNA) and restoration of the DNA by a mechanism that does not involve homologous DNA recombination.","definition_xrefs":["GOC:vw","PMID:22064477","PMID:11154259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstrand cross-link repair","termid":"GO:0036297"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00727":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"non-recombinational interstrand cross-link repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"recombination-independent ICL repair","type":"exact"},{"name":"recombination-independent interstrand cross-link repair","type":"exact"}],"termid":"GO:0036299","terms_by_termid":{"GO:0036299":null}}


id: PR:O74374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoglucomutase-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22573:SF5","PRO:DNx","OMA:SCHPO03429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.10","secondary_identifiers":["UniProtKB:O74374"],"synonyms":[{"name":"PGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGM1","type":"exact"},{"name":"glucose phosphomutase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74374"}


id: PBO:0067962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 264","termid":"PBO:0067962"}


id: PBO:0079433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma 2","termid":"PBO:0079433"}


id: PBO:0046537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 18 member 1","termid":"PBO:0046537"}


id: MONDO:0009085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deafness-vitiligo-achalasia syndrome is characterized by the association of deafness, short stature, vitiligo, muscle wasting, and achalasia.","definition_xrefs":["Orphanet:3239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-vitiligo-achalasia syndrome","secondary_identifiers":["UMLS:C1857339","MEDGEN:347427","MESH:C565642","OMIM:221350","GARD:1705"],"synonyms":[{"name":"congenital deafness with vitiligo and achalasia","type":"related"},{"name":"deafness vitiligo achalasia","type":"related"},{"name":"deafness, congenital, with vitiligo and achalasia","type":"related"}],"termid":"MONDO:0009085","xrefs":{"Monarch":{"xref_id":"0009085"}}}


id: GO:0006286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Excision of the sugar phosphate residue at an AP site, i.e. a deoxyribose sugar with a missing base, by a phosphodiesterase enzyme.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete base-excision repair, base-free sugar-phosphate removal (obsolete GO:0006286)","termid":"GO:0006286"}


id: PBO:0029164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation","termid":"PBO:0029164"}


id: GO:0052027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host signal transduction pathway","secondary_identifiers":["GO:0052250"],"synonyms":[{"name":"modulation by symbiont of host signal transduction","type":"related"},{"name":"modulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"modulation of host signal transduction by symbiont","type":"exact"},{"name":"modulation of signal transduction in other organism involved in symbiotic interaction","type":"broad"},{"name":"perturbation of host signal transduction pathway","type":"exact"},{"name":"regulation by symbiont of host signal transduction pathway","type":"exact"}],"termid":"GO:0052027"}


id: MONDO:1040014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder caused by variation in the PPFIA3 gene. This disorder is characterised by developmental delay and intellectual disability. Most patients present variable additional features, including dysmorphisms, microcephaly or macrocephaly, hypotonia, autism spectrum disorder or autistic features, abnormal electroencephalogram, and epilepsy.","definition_xrefs":["PMID:38181735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"PPFIA3-related neurodevelopmental disorder","termid":"MONDO:1040014","xrefs":{"Monarch":{"xref_id":"1040014"}}}


id: FYPO:0005696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from the interphase microtubule organizing center does not occur. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cytoplasmic interphase microtubule nucleation","termid":"FYPO:0004766"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule nucleation from iMTOC","synonyms":[{"name":"abolished cytoplasmic interphase microtubule nucleation from iMTOC","type":"exact"},{"name":"abolished cytoplasmic microtubule nucleation from iMTOC during mitotic interphase","type":"exact"},{"name":"abolished interphase cytoplasmic microtubule nucleation from iMTOC","type":"exact"},{"name":"abolished interphase microtubule nucleation from iMTOC during mitotic cell cycle","type":"exact"},{"name":"abolished interphase microtubule nucleation from iMTOC during vegetative growth","type":"exact"},{"name":"abolished microtubule nucleation from interphase microtubule organizing center","type":"exact"},{"name":"abolished microtubule nucleation from interphase microtubule organizing centre","type":"exact"},{"name":"cytoplasmic microtubule nucleation from iMTOC abolished","type":"exact"}],"termid":"FYPO:0005696"}


id: MONDO:0006227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the stomach. The vast majority of cases arise from the corpus-fundus region. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent. It may be associated with autoimmune chronic atrophic gastritis, multiple endocrine neoplasia type 1, or it may be sporadic.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric neuroendocrine tumor G1","secondary_identifiers":["UMLS:C0349529","EFO:1000275","MEDGEN:83885","NCIT:C4635"],"synonyms":[{"name":"gastric ECL cell NET","type":"exact"},{"name":"gastric ECL cell NET G1","type":"exact"},{"name":"gastric ECL cell, histamine-producing NET","type":"exact"},{"name":"gastric ECL-cell carcinoid tumor","type":"exact"},{"name":"gastric ECL-cell carcinoid tumour","type":"exact"},{"name":"gastric NET G1","type":"exact"},{"name":"gastric carcinoid tumor","type":"exact"},{"name":"gastric carcinoid tumour","type":"exact"},{"name":"gastric enterochromaffin-like cell carcinoid tumor","type":"exact"},{"name":"gastric enterochromaffin-like cell carcinoid tumour","type":"exact"},{"name":"gastric enterochromaffin-like cell neuroendocrine tumor","type":"exact"},{"name":"gastric enterochromaffin-like cell neuroendocrine tumour","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of stomach","type":"exact"},{"name":"stomach NET G1","type":"exact"},{"name":"stomach carcinoid tumor","type":"exact"},{"name":"stomach carcinoid tumour","type":"exact"},{"name":"stomach neuroendocrine neoplasm G1","type":"exact"},{"name":"stomach neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0006227","xrefs":{"Monarch":{"xref_id":"0006227"}}}


id: MONDO:0005495
data:
  {"annotated_genes":["SJAG_02398","SJAG_02148","SJAG_04270","SJAG_03429","SJAG_01036","SJAG_01895","SJAG_02696","SJAG_00260","SJAG_01671","SJAG_04312","SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009025"},{"annotations":[89059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[87382,87383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"},{"annotations":[88544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[87659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[88834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[88744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[87448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[88237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014359"}]},"cv_name":"mondo","definition":"A disease involving the adrenal gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01036":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02148":null,"SJAG_02398":null,"SJAG_02696":null,"SJAG_03429":null,"SJAG_03920":null,"SJAG_04270":null,"SJAG_04312":null},"genotype_count":0,"is_obsolete":false,"name":"adrenal gland disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0005539","ICD9:255.8","SCTID:30171000","UMLS:C4021794","NCIT:C26690","ICD9:255.9","MEDGEN:892577","DOID:9553","ICD9:255","MESH:D000307"],"synonyms":[{"name":"adrenal gland disease","type":"exact"},{"name":"adrenal gland disease or disorder","type":"exact"},{"name":"adrenal gland diseases","type":"exact"},{"name":"adrenal gland disorder","type":"exact"},{"name":"adrenal gland disorders","type":"exact"},{"name":"disease of adrenal gland","type":"exact"},{"name":"disease or disorder of adrenal gland","type":"exact"},{"name":"disorder of adrenal gland","type":"exact"}],"termid":"MONDO:0005495","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0009025":null,"MONDO:0009050":null,"MONDO:0011121":null,"MONDO:0011503":null,"MONDO:0011544":null,"MONDO:0013310":null,"MONDO:0013602":null,"MONDO:0014359":null},"xrefs":{"Monarch":{"xref_id":"0005495"}}}


id: PBO:0085721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in telomeric silencing; required for quiescent cell telomere hypercluster localization at nuclear membrane vicinity; interacts with PAD4-domain of Sir4p","termid":"PBO:0085721"}


id: PBO:0083508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CDC7/YDL153C, the catalytic subunit of a complex that regulates DNA replication","termid":"PBO:0083508"}


id: PBO:0035900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_re-entry_into_mitotic_cell_cycle_after_arrest_in_response_to_heat_shock","termid":"PBO:0035900"}


id: GO:0052703
data:
  {"annotated_genes":["SJAG_00832","SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105528,113499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[72671,105529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of compounds derived from histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"modified histidine metabolic process","termid":"GO:0052701"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modified histidine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular histidine derivative anabolism","type":"exact"},{"name":"cellular histidine derivative biosynthesis","type":"exact"},{"name":"cellular histidine derivative biosynthetic process","type":"exact"},{"name":"cellular histidine derivative formation","type":"exact"},{"name":"cellular histidine derivative synthesis","type":"exact"},{"name":"cellular modified histidine anabolism","type":"exact"},{"name":"cellular modified histidine biosynthesis","type":"exact"},{"name":"cellular modified histidine formation","type":"exact"},{"name":"cellular modified histidine synthesis","type":"exact"},{"name":"histidine derivative biosynthetic process","type":"exact"}],"termid":"GO:0052703","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: GO:0050129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-glutamate + H2O = L-glutamate + formate.","definition_xrefs":["EC:3.5.1.68","RHEA:12476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"N-formylglutamate deformylase activity","secondary_identifiers":["KEGG_REACTION:R00525","MetaCyc:N-FORMYLGLUTAMATE-DEFORMYLASE-RXN"],"synonyms":[{"name":"N-formyl-L-glutamate amidohydrolase activity","type":"related"},{"name":"N-formylglutamate hydrolase activity","type":"related"},{"name":"beta-citryl-L-glutamate amidase activity","type":"related"},{"name":"beta-citryl-L-glutamate amidohydrolase activity","type":"related"},{"name":"beta-citryl-L-glutamate hydrolase activity","type":"related"},{"name":"beta-citryl-L-glutamate-hydrolyzing enzyme","type":"related"},{"name":"beta-citrylglutamate amidase activity","type":"related"},{"name":"formylglutamate deformylase activity","type":"related"}],"termid":"GO:0050129"}


id: PBO:0087571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH and nucleotide excision repair factor 3 complexes; required for nucleotide excision repair, target for transcriptional activators; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087571"}


id: GO:0102596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-sandaracopimara-8(14),15-diene + NADPH + H+ + O2 = ent-sandaracopimaradien-3beta-ol + NADP + H2O.","definition_xrefs":["EC:1.14.14.70","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cytochrome P450 dependent ent-sandaracopimaradiene 3-hydroxylase activity","secondary_identifiers":["RHEA:41464","MetaCyc:RXN-15379"],"termid":"GO:0102596"}


id: GO:0006775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"fat-soluble vitamin metabolic process","secondary_identifiers":["Reactome:R-HSA-6806667"],"synonyms":[{"name":"fat-soluble vitamin metabolism","type":"exact"}],"termid":"GO:0006775"}


id: PBO:0041883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 2","termid":"PBO:0041883"}


id: PBO:0042374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 receptor 1 like","termid":"PBO:0042374"}


id: PBO:0055703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLPH pseudogene 2","termid":"PBO:0055703"}


id: GO:0051391
data:
  {"annotated_genes":["SJAG_01877","SJAG_01638"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74136,109254],"is_not":false,"summary":null,"term":"GO:0051391"}]},"cv_name":"biological_process","definition":"The modification of tRNA structure by addition of an acetyl group to tRNA. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"RNA acetylation","termid":"GO:1990884"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01638":null,"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA acetylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051391","terms_by_termid":{"GO:0051391":null}}


id: GO:0035538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a carbohydrate response element (ChoRE) found in the promoters of genes whose expression is regulated in response to carbohydrates, such as the triglyceride synthesis genes.","definition_xrefs":["GOC:BHF","PMID:20001964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"carbohydrate response element binding","synonyms":[{"name":"ChoRE binding","type":"exact"}],"termid":"GO:0035538"}


id: MONDO:0018735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Human MALT1 wild-type allele is located in the vicinity of 18q21 and is approximately 79 kb in length. This allele, which encodes mucosa associated lymphoid tissue lymphoma translocation gene 1 protein, plays a role in the modulation of the nuclear factor kappa B complex signaling cascade. The gene is involved in a chromosomal translocation t(11;18)(q21;q21) with the BIRC2 gene in mucosa-associated lymphoid tissue lymphomas.","definition_xrefs":["NCIT:C60672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"multifocal lymphangioendotheliomatosis-thrombocytopenia syndrome","secondary_identifiers":["MEDGEN:1804470","Orphanet:464321","GARD:10467","UMLS:C5575322"],"synonyms":[{"name":"DKFZp434L132","type":"exact"},{"name":"MALT1 wt allele","type":"exact"},{"name":"MLT","type":"exact"},{"name":"MLT1","type":"exact"},{"name":"cutaneovisceral angiomatosis-thrombocytopenia syndrome","type":"exact"},{"name":"mucosa associated lymphoid tissue lymphoma translocation Gene 1 wt allele","type":"exact"},{"name":"multifocal lymphangioendotheliomatosis with thrombocytopenia","type":"exact"}],"termid":"MONDO:0018735","xrefs":{"Monarch":{"xref_id":"0018735"}}}


id: MONDO:0007190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 2","secondary_identifiers":["OMIM:109543","UMLS:C1868683","MEDGEN:358385"],"synonyms":[{"name":"B-cell malignancy, low-grade","type":"related"},{"name":"Clls2","type":"related"},{"name":"disrupted in B-cell malignancy","type":"related"},{"name":"leukemia, chronic lymphocytic, B-cell","type":"related"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 2","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0007190","xrefs":{"Monarch":{"xref_id":"0007190"}}}


id: PR:000029043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe 972h- protein","synonyms":[{"name":"Spom972h- protein","type":"exact"}],"termid":"PR:000029043"}


id: MONDO:0012262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"fibrosis of extraocular muscles, congenital, 3c","secondary_identifiers":["GARD:15459","DOID:0081019","MEDGEN:412956","MESH:C567666","OMIM:609384","UMLS:C2750404"],"synonyms":[{"name":"CFEOM3C","type":"exact"},{"name":"Feom4 locus","type":"related"},{"name":"fibrosis of extraocular muscles, congenital, 3C","type":"related"}],"termid":"MONDO:0012262","xrefs":{"Monarch":{"xref_id":"0012262"}}}


id: MONDO:0021964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"developmental disability","termid":"MONDO:0005287"},{"relation_name":"is_a","term_name":"megalencephaly","termid":"MONDO:0016608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bagatelle Cassidy syndrome","secondary_identifiers":["MEDGEN:444100","UMLS:C2931616","GARD:398","MESH:C537796"],"synonyms":[{"name":"macrocephaly short limbs deafness","type":"related"},{"name":"macrocephaly, hypertelorism, short limbs, hearing loss, and developmental delay","type":"related"}],"termid":"MONDO:0021964","xrefs":{"Monarch":{"xref_id":"0021964"}}}


id: FYPO:0007032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the glycosylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid.","definition_xrefs":["GO:0006486","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein glycosylation during vegetative growth","synonyms":[{"name":"increased protein glycosylation during mitotic cell cycle","type":"related"},{"name":"protein hyperglycosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007032"}


id: PBO:0066306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination signal binding protein for immunoglobulin kappa J region like","termid":"PBO:0066306"}


id: GO:1990134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An apoptotic process in a palatal shelf epithelial cell that contributes to the shaping of the palatal shelf.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph","PMID:16607638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"},{"relation_name":"part_of","term_name":"secondary palate development","termid":"GO:0062009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell apoptotic process involved in palatal shelf morphogenesis","termid":"GO:1990134"}


id: GO:0030096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the membrane-derived thylakoid, containing the P680 reaction center. In the light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem II","termid":"GO:0009523"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid photosystem II","synonyms":[{"name":"plasma membrane photosystem II","type":"exact"}],"termid":"GO:0030096"}


id: FYPO:0002948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the fungal-type cell wall is delaminated, i.e. one or more of its layers peels off.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002946"],"is_obsolete":false,"name":"delaminated cell wall","synonyms":[{"name":"delaminate cell wall","type":"exact"}],"termid":"FYPO:0002948"}


id: RO:0002587
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_formation_of","termid":"_global:results_in_formation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_synthesis_of","termid":"RO:0002587"}


id: FYPO:0007781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the transition from yeast-form to hyphal growth begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0007773"}],"interesting_parent_ids":["FYPO:0007773","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of hyphal transition","synonyms":[{"name":"delayed hyphal transition","type":"exact"},{"name":"delayed onset of transition to hyphal growth","type":"exact"}],"termid":"FYPO:0007781"}


id: MOD:00133
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamine residue and an L-lysine residue by an isopeptide bond with the formation of N6-(L-isoglutamyl)-L-lysine and the release of ammonia.","definition_xrefs":["PubMed:5637041","PubMed:2461365","DeltaMass:0","PubMed:5656070","PubMed:8598899","RESID:AA0124#GLN","ChEBI:21863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"N6-(L-isoglutamyl)-L-lysine","termid":"MOD:01630"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(L-isoglutamyl)-L-lysine (Gln)","synonyms":[{"name":"(2S)-2-amino-6-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"2-azanyl-6-([4-azanyl-4-carboxybutanoyl]azanyl)hexanoic acid","type":"exact"},{"name":"5-glutamyl N6-lysine","type":"exact"},{"name":"CROSSLNK Isoglutamyl lysine isopeptide (Lys-Gln)","type":"exact"},{"name":"N alpha -(gamma-Glutamyl)-lysine","type":"exact"},{"name":"N(epsilon)-(gamma-glutamyl)lysine","type":"exact"},{"name":"N6-(L-isoglutamyl)-L-lysine","type":"exact"},{"name":"XLNK-N6Lys-5Glu(Gln)","type":"exact"}],"termid":"MOD:00133"}


id: GO:0072570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ADP-D-ribose, an ADP-aldose having ribose as the aldose fragment.","definition_xrefs":["GOC:mah","GOC:sart","PMID:20088964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"},{"relation_name":"is_a","term_name":"nucleoside phosphate binding","termid":"GO:1901265"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ADP-D-ribose binding","synonyms":[{"name":"ADP-ribose binding","type":"broad"}],"termid":"GO:0072570"}


id: PBO:0064448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocan like 1","termid":"PBO:0064448"}


id: GO:0032825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell activation","termid":"GO:0032816"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte differentiation","termid":"GO:0045621"},{"relation_name":"positively_regulates","term_name":"natural killer cell differentiation","termid":"GO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell differentiation","synonyms":[{"name":"activation of natural killer cell differentiation","type":"narrow"},{"name":"positive regulation of NK cell differentiation","type":"exact"},{"name":"positive regulation of natural killer cell development","type":"related"},{"name":"stimulation of natural killer cell differentiation","type":"narrow"},{"name":"up regulation of natural killer cell differentiation","type":"exact"},{"name":"up-regulation of natural killer cell differentiation","type":"exact"},{"name":"upregulation of natural killer cell differentiation","type":"exact"}],"termid":"GO:0032825"}


id: PBO:0063783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 8","termid":"PBO:0063783"}


id: GO:0060599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of a mammary duct.","definition_xrefs":["GOC:dph","PMID:17120154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sprouting from an epithelium","termid":"GO:0060601"},{"relation_name":"part_of","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting involved in mammary gland duct morphogenesis","synonyms":[{"name":"mammary gland duct secondary branching","type":"exact"}],"termid":"GO:0060599"}


id: MONDO:0013306
data:
  {"annotated_genes":["SJAG_00308"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89053],"is_not":false,"summary":null,"term":"MONDO:0013306"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 7 is a rare mitochondrial disease due to a defect in mitochondrial protein synthesis characterized by a variable phenotype that includes onset in infancy or early childhood of failure to thrive and psychomotor regression (after initial normal development), as well as ocular manifestations (such as ptosis, nystagmus, optic atrophy, ophthalmoplegia and reduced vision). Additional manifestations include bulbar paresis with facial weakness, hypotonia, difficulty chewing, dysphagia, mild dysarthria, ataxia, global muscle atrophy, and areflexia. It has a relatively slow disease progression with patients often living into the third decade of life.","definition_xrefs":["Orphanet:254930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00308":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111487","GARD:17234","UMLS:C3150801","OMIM:613559","MEDGEN:462151","SCTID:763204003"],"synonyms":[{"name":"C12ORF65 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"C12orf65 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"COXPD7","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 7","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in C12ORF65","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in C12orf65","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 7","type":"exact"},{"name":"severe C12ORF65-related COXPD","type":"exact"},{"name":"severe C12ORF65-related combined oxidative phosphorylation defect","type":"exact"}],"termid":"MONDO:0013306","terms_by_termid":{"MONDO:0013306":null},"xrefs":{"Monarch":{"xref_id":"0013306"}}}


id: GO:0060978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Blood vessel formation in the heart when new vessels emerge from the proliferation of pre-existing blood vessels.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis","termid":"GO:0001525"},{"relation_name":"part_of","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiogenesis involved in coronary vascular morphogenesis","synonyms":[{"name":"angiogenesis involved in cardiac vascular morphogenesis","type":"exact"},{"name":"angiogenesis involved in heart vascular morphogenesis","type":"exact"},{"name":"coronary blood vessel angiogenesis","type":"exact"},{"name":"coronary vasculature angiogenesis","type":"exact"}],"termid":"GO:0060978"}


id: PBO:0031824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_RNA_modification","termid":"PBO:0031824"}


id: GO:0170002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sodium-specific negative tropism that is crucial for surviving and thriving under high salinity.","definition_xrefs":["PMID:36243013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"halotropism","synonyms":[{"name":"root halotropism","type":"exact"}],"termid":"GO:0170002"}


id: GO:1901200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of calcium ion transport into cytosol that is involved in cellular response to salt stress.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport into cytosol","termid":"GO:0010523"},{"relation_name":"part_of","term_name":"cellular response to salt stress","termid":"GO:0071472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of calcium ion transport into cytosol involved in cellular response to salt stress","synonyms":[{"name":"negative regulation of calcium ion transport into cytosol involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"negative regulation of calcium ion transport into cytosol involved in cellular salinity response","type":"exact"}],"termid":"GO:1901200"}


id: PBO:0087714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential protein","termid":"PBO:0087714"}


id: PBO:0003833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsd90 protein","termid":"PBO:0003833"}


id: GO:0097191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with either a ligand binding to a cell surface receptor, or a ligand being withdrawn from a cell surface receptor (e.g. in the case of signaling by dependence receptors), and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["PMID:17340152","GOC:yaf","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extrinsic apoptotic signaling pathway","secondary_identifiers":["Reactome:R-HSA-5357769"],"synonyms":[{"name":"death receptor-mediated apoptosis","type":"narrow"},{"name":"extrinsic apoptosis","type":"narrow"},{"name":"extrinsic apoptotic pathway","type":"exact"},{"name":"extrinsic apoptotic signaling pathway in presence of ligand","type":"narrow"},{"name":"extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:0097191"}


id: MONDO:1012345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"comedo syndrome, non-human animal","termid":"MONDO:1011745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"comedo syndrome, dog","secondary_identifiers":["OMIA:001272-9615"],"termid":"MONDO:1012345","xrefs":{"Monarch":{"xref_id":"1012345"}}}


id: PBO:0080072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 36","termid":"PBO:0080072"}


id: PBO:0028370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GU_repeat_RNA_binding","termid":"PBO:0028370"}


id: PBO:0047666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fukutin","termid":"PBO:0047666"}


id: PBO:0065288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 3","termid":"PBO:0065288"}


id: MONDO:0018124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oncogenic osteomalacia is characterized by the development of a tumor that causes the bones to be weakened. This occurs when a tumor secretes a substance called fibroblast growth factor 23 (FGF23). FGF23 inhibits the ability of the kidneys to absorb phosphate. Phosphate is important for keeping bones strong and healthy. Therefore, this disease is characterized by a softening and weakening of the bones (osteomalacia). The disease also results in multiple biochemical abnormalities including high levels of phosphate in the urine (hyperphosphaturia) and low levels of phosphate in the blood (hypophosphatemia). The majority of tumors that cause oncogenic osteomalacia are small and slow-growing. These tumors most commonly occur in the skin, muscles, or bones of the extremities or in the paranasal sinuses around the head. Most of these tumors are benign, meaning they are not associated with cancer. The exact reason that the tumors associated with oncogenic osteomalacia develop is not known. The disease is diagnosed when a person experiences clinical features such as bone weakening and hyperphosphaturia and a tumor is found by imaging of the body. Treatment of the disease consists of surgical removal of the tumor. The symptoms of the disease, including the weakening of the bones, typically resolve once the tumor is removed.","direct_ancestors":[{"relation_name":"is_a","term_name":"osteomalacia","termid":"MONDO:0001068"},{"relation_name":"is_a","term_name":"parneoplastic endocrine syndrome","termid":"MONDO:0700252"},{"relation_name":"is_a","term_name":"paraneoplastic renal syndrome","termid":"MONDO:0700255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oncogenic osteomalacia","secondary_identifiers":["MEDGEN:226893","GARD:9652","Orphanet:352540","NCIT:C67235","SCTID:392559009","MESH:C537751","UMLS:C1274103"],"synonyms":[{"name":"OO","type":"related"},{"name":"OOM","type":"related"},{"name":"Oncogenic hypophosphatemic osteomalacia","type":"exact"},{"name":"TIO","type":"exact"},{"name":"tumor-induced osteomalacia","type":"exact"}],"termid":"MONDO:0018124","xrefs":{"Monarch":{"xref_id":"0018124"}}}


id: MONDO:0008989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrulline transport defect","secondary_identifiers":["MEDGEN:349092","UMLS:C1859084","OMIM:215720","MESH:C536207"],"synonyms":[{"name":"citrulline transport defect","type":"exact"}],"termid":"MONDO:0008989","xrefs":{"Monarch":{"xref_id":"0008989"}}}


id: PBO:0039156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 3","termid":"PBO:0039156"}


id: GO:0061236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mesonephric comma-shaped body is generated and organized. The mesonephric comma-shaped body is the precursor structure to the mesonephric S-shaped body that contributes to the morphogenesis of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"comma-shaped body morphogenesis","termid":"GO:0072049"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric comma-shaped body morphogenesis","termid":"GO:0061236"}


id: PBO:0091843
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.3619003_3619004insG","termid":"PBO:0091843"}


id: GO:0034061
data:
  {"annotated_genes":["SJAG_02658","SJAG_16460","SJAG_03906","SJAG_02818","SJAG_05979","SJAG_00611","SJAG_00814","SJAG_05239","SJAG_05197","SJAG_00153","SJAG_04877","SJAG_02908","SJAG_04791","SJAG_04089"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97104],"is_not":false,"summary":null,"term":"GO:0034061"},{"annotations":[79746,75000,76618,78648,79446,104731,75764,76592,58482,104782,72179,76840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003887"},{"annotations":[72412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003720"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1).","definition_xrefs":["RHEA:22508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_02658":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_05979":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"DNA polymerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034061","terms_by_termid":{"GO:0003720":null,"GO:0003887":null,"GO:0034061":null}}


id: GO:0072306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the metanephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072041"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:0072304"},{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900213"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis","termid":"GO:0072309"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","synonyms":[{"name":"positive regulation of mesenchymal stem cell apoptosis involved in metanephric nephron morphogenesis","type":"narrow"},{"name":"positive regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis","type":"exact"}],"termid":"GO:0072306"}


id: GO:0044382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a CLRC complex is transported to, or maintained in, heterochromatin. CLRC complex is an active cullin-dependent E3 ubiquitin ligase complex essential for heterochromatin assembly by RNAi and histone H3K9 methylation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to heterochromatin","termid":"GO:0097355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"CLRC complex localization to heterochromatin","synonyms":[{"name":"CLRC ubiquitin ligase complex localisation to heterochromatin","type":"exact"},{"name":"CLRC ubiquitin ligase complex localization to heterochromatin","type":"exact"}],"termid":"GO:0044382"}


id: PBO:0048569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GGCT pseudogene 2","termid":"PBO:0048569"}


id: PBO:0082057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase; catalyzes the first step in aromatic amino acid biosynthesis and is feedback-inhibited by phenylalanine or high concentration of tyrosine or tryptophan","termid":"PBO:0082057"}


id: GO:0018783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: deisopropyldeethylatrazine + H2O = 2-chloro-4-hydroxy-6-amino-1,3,5-triazine + NH3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete deisopropyldeethylatrazine hydrolase activity (obsolete GO:0018783)","termid":"GO:0018783"}


id: PBO:0090718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome base subcomplex ATPase subunit Rpt3","termid":"PBO:0090718"}


id: PBO:0001865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein (predicted)","termid":"PBO:0001865"}


id: PBO:0091896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive poison Wtf4","termid":"PBO:0091896"}


id: GO:0046696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that consists of at least three proteins, CD14, TLR4, and MD-2, each of which is glycosylated and which functions as a lipopolysaccharide (LPS) receptor that primes the innate immune response against bacterial pathogens.","definition_xrefs":["PMID:9665271","PMID:11706042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"lipopolysaccharide receptor complex","synonyms":[{"name":"LPS receptor complex","type":"exact"}],"termid":"GO:0046696"}


id: PBO:0072006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 8","termid":"PBO:0072006"}


id: GO:0010566
data:
  {"annotated_genes":["SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a ketone, carried out by individual cells.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"ketone biosynthetic process","termid":"GO:0042181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of ketone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010566","terms_by_termid":{"GO:1904775":null}}


id: PBO:0084031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein of unknown function; interacts with Gea1p and Gea2p; required for localization of Gea2p; computational analysis suggests a possible role in either cell wall synthesis or protein-vacuolar targeting; conserved from yeast to human","termid":"PBO:0084031"}


id: PBO:0090074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding splicing factor Ntr1","termid":"PBO:0090074"}


id: PBO:0065681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase domain containing 1","termid":"PBO:0065681"}


id: PBO:0034476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_spindle_during_meiosis_I","termid":"PBO:0034476"}


id: FYPO:0004470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is decreased during anaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to actomyosin contractile ring during mitosis","termid":"FYPO:0005467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0000631","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to actomyosin contractile ring during mitotic anaphase","synonyms":[{"name":"decreased protein localisation to actomyosin contractile ring during mitotic anaphase","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring during anaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring during anaphase of mitosis","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring involved in mitotic cytokinesis during mitotic anaphase","type":"exact"},{"name":"decreased protein localization to cytokinetic contractile ring during mitotic anaphase","type":"exact"},{"name":"decreased protein localization to mitotic contractile ring during mitotic anaphase","type":"exact"},{"name":"decreased protein recruitment to actomyosin contractile ring during mitotic anaphase","type":"related"},{"name":"reduced protein localization to actomyosin contractile ring during mitotic anaphase","type":"exact"}],"termid":"FYPO:0004470"}


id: PBO:0049883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 2","termid":"PBO:0049883"}


id: PBO:0065552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 2","termid":"PBO:0065552"}


id: PBO:0003892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cycloisomerase 2 family","termid":"PBO:0003892"}


id: MONDO:0008148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta type IV is a moderate type of osteogenesis imperfecta (OI), a genetic disorder characterized by increased bone fragility, low bone mass and susceptibility to bone fractures. Patients with type IV have moderately short stature, mild to moderate scoliosis, grayish or white sclera, and dentinogenesis imperfecta (DI).","definition_xrefs":["Orphanet:216820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 4","secondary_identifiers":["NCIT:C98576","SCTID:205497004","icd11.foundation:829297901","MEDGEN:78665","MESH:C536045","DOID:0110340","GARD:8696","OMIM:166220","UMLS:C0268363"],"synonyms":[{"name":"OI type 4","type":"exact"},{"name":"OI type IV","type":"related"},{"name":"OI, type 4","type":"related"},{"name":"OI4","type":"exact"},{"name":"common variable OI with normal sclerae","type":"related"},{"name":"osteogenesis imperfecta type IV","type":"exact"},{"name":"osteogenesis imperfecta with normal sclera","type":"exact"},{"name":"osteogenesis imperfecta with normal sclerae","type":"related"},{"name":"osteogenesis imperfecta, type 4","type":"related"},{"name":"osteogenesis imperfecta, type IV","type":"related"}],"termid":"MONDO:0008148","xrefs":{"Monarch":{"xref_id":"0008148"}}}


id: PBO:0068229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 536","termid":"PBO:0068229"}


id: PBO:0071648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 12","termid":"PBO:0071648"}


id: MONDO:0018331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic dystonia (obsolete MONDO:0018331)","termid":"MONDO:0018331","xrefs":{"Monarch":{"xref_id":"0018331"}}}


id: PR:Q1MTN8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16D10.01c gene.","definition_xrefs":["UniProtKB:Q1MTN8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly chaperone of rpl4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.01c","synonyms":[{"name":"Spom972h-SPBC16D10.01c","type":"exact"}],"termid":"PR:Q1MTN8"}


id: MONDO:0008549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thoracic dysostosis, isolated","secondary_identifiers":["UMLS:C1861204","MEDGEN:396080","MESH:C566063","OMIM:187750"],"synonyms":[{"name":"thoracic dysostosis, isolated","type":"exact"}],"termid":"MONDO:0008549","xrefs":{"Monarch":{"xref_id":"0008549"}}}


id: PBO:0088269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex beta subunit Apl1","termid":"PBO:0088269"}


id: GO:0071141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of only SMAD proteins; may be homomeric or heteromeric. Heteromeric complexes act as transcription factors while homomeric complexes exist but are transcriptionally inactive. Hetero- versus homotrimerization is largely enthalpy driven.","definition_xrefs":["GOC:mah","PMID:9670020","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SMAD protein complex","synonyms":[{"name":"SMAD complex","type":"exact"}],"termid":"GO:0071141"}


id: GO:1903216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein processing involved in protein targeting to mitochondrion.","definition_xrefs":["GOC:PARL","PMID:21370995","GOC:TermGenie","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"protein processing involved in protein targeting to mitochondrion","termid":"GO:0006627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of protein processing involved in protein targeting to mitochondrion","synonyms":[{"name":"regulation of mitochondrial processing","type":"broad"},{"name":"regulation of mitochondrial protein processing during import","type":"related"}],"termid":"GO:1903216"}


id: GO:0044143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the symbiont's progression from an initial condition to a later condition, on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of development of symbiont on or near host surface (obsolete GO:0044143)","termid":"GO:0044143"}


id: PBO:0045383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP4 divergent transcript","termid":"PBO:0045383"}


id: PBO:0039500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 23","termid":"PBO:0039500"}


id: PBO:0001908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLASP family microtubule-associated protein","termid":"PBO:0001908"}


id: PR:Q9USS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysophosphatidic acid phosphatase type 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase SPBC4.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.06","secondary_identifiers":["UniProtKB:Q9USS6"],"synonyms":[{"name":"Spom972h-ACP6","type":"exact"}],"termid":"PR:Q9USS6"}


id: FYPO:0005539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of telomerase RNA reverse transcriptase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal telomerase RNA reverse transcriptase activity","synonyms":[{"name":"abnormal telomerase activity","type":"broad"}],"termid":"FYPO:0005539"}


id: PBO:0080933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 transcription factor","termid":"PBO:0080933"}


id: GO:1901151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of vistamycin.","definition_xrefs":["UniPathway:UPA00972","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic catabolic process","termid":"GO:0030649"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"vistamycin metabolic process","termid":"GO:1901150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vistamycin catabolic process","synonyms":[{"name":"ribostamycin breakdown","type":"exact"},{"name":"ribostamycin catabolic process","type":"exact"},{"name":"ribostamycin catabolism","type":"exact"},{"name":"ribostamycin degradation","type":"exact"},{"name":"vistamycin breakdown","type":"exact"},{"name":"vistamycin catabolism","type":"exact"},{"name":"vistamycin degradation","type":"exact"}],"termid":"GO:1901151"}


id: PBO:0017004
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 Arrest Defective","termid":"PBO:0017004"}


id: MONDO:0004562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ductal breast carcinoma in situ, characterized by the presence of neoplastic epithelial cells with apocrine differentiation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma in situ","termid":"MONDO:0004658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast apocrine carcinoma in situ","secondary_identifiers":["MEDGEN:231073","DOID:8428","UMLS:C1332315","NCIT:C5140"],"synonyms":[{"name":"apocrine breast carcinoma in situ","type":"exact"},{"name":"apocrine carcinoma in situ of breast","type":"exact"},{"name":"apocrine carcinoma in situ of the breast","type":"exact"}],"termid":"MONDO:0004562","xrefs":{"Monarch":{"xref_id":"0004562"}}}


id: PBO:0059093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 (pseudogene)","termid":"PBO:0059093"}


id: MONDO:0011638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroferritinopathy is a late-onset type of neurodegeneration with brain iron accumulation (NBIA) characterized by progressive chorea or dystonia and subtle cognitive deficits.","definition_xrefs":["Orphanet:157846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"},{"relation_name":"is_a","term_name":"disorder of iron metabolism and transport","termid":"MONDO:0017763"},{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"neuroferritinopathy","secondary_identifiers":["DOID:0110737","MESH:C548080","OMIM:606159","UMLS:C1853578","SCTID:699299001","NANDO:1200542","GARD:10686","NANDO:1200539","ICD9:333.0","MEDGEN:381211"],"synonyms":[{"name":"NBIA3","type":"exact"},{"name":"Neuroferritinopathy; basal ganglia disease, adult-onset","type":"exact"},{"name":"adult basal ganglia disease","type":"exact"},{"name":"basal ganglia disease adult-onset","type":"related"},{"name":"basal ganglia disease, adult-onset","type":"related"},{"name":"ferritin-related neurodegeneration","type":"exact"},{"name":"hereditary ferritinopathy","type":"exact"},{"name":"neurodegeneration with brain iron accumulation 3","type":"related"},{"name":"neurodegeneration with brain iron accumulation type 3","type":"exact"},{"name":"neuroferritinopathy","type":"exact"}],"termid":"MONDO:0011638","xrefs":{"Monarch":{"xref_id":"0011638"}}}


id: PBO:0063018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 associated glutamate rich protein 1","termid":"PBO:0063018"}


id: GO:1902790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving undecan-2-one.","definition_xrefs":["GO_REF:0000068","GOC:mengo_curators","PMID:4950559","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"undecan-2-one metabolic process","synonyms":[{"name":"undecan-2-one metabolism","type":"exact"}],"termid":"GO:1902790"}


id: MONDO:0030933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 37","secondary_identifiers":["UMLS:C5543064","MEDGEN:1786742","OMIM:619185","GARD:16434"],"synonyms":[{"name":"JBTS37","type":"exact"},{"name":"Joubert syndrome 37","type":"exact"}],"termid":"MONDO:0030933","xrefs":{"Monarch":{"xref_id":"0030933"}}}


id: GO:1904038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of export of iron ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:15514116","GO_REF:0000058","GOC:TermGenie","GOC:kom","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"},{"relation_name":"regulates","term_name":"iron ion export across plasma membrane","termid":"GO:1903988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of iron export across plasma membrane","synonyms":[{"name":"regulation of ferrous iron export","type":"narrow"},{"name":"regulation of iron(2+) export","type":"narrow"}],"termid":"GO:1904038"}


id: MONDO:0016437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Late-onset focal dermal elastosis is a rare, acquired, dermis elastic tissue disorder characterized by a pseudoxanthoma elasticum-like papular eruption consisting of multiple, slowly progressive, asymptomatic, 2-5 mm, white to yellowish, non-follicular papules (that tend to form cobblestone plaques) predominantly distributed over the neck, axillae and flexural areas, with no systemic involvement. Skin biopsy reveals a focal increase of normal-appearing elastic tissue in the reticular dermis with no calcium deposits.","definition_xrefs":["Orphanet:228227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"late-onset focal dermal elastosis","secondary_identifiers":["MEDGEN:1658281","GARD:20578","UMLS:C4751167"],"synonyms":[{"name":"PXE-like late-onset focal dermal elastosis","type":"exact"},{"name":"pseudoxanthoma-like late-onset focal dermal elastosis","type":"exact"}],"termid":"MONDO:0016437","xrefs":{"Monarch":{"xref_id":"0016437"}}}


id: PBO:0073769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 2","termid":"PBO:0073769"}


id: GO:0090562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N,N'-diacetylchitobiose(out) = protein histidine + N,N'-diacetylchitobiose phosphate(in).","definition_xrefs":["GOC:am","PMID:10913119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0022857","GO:0005215","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N,N'-diacetylchitobiose phosphotransferase system transporter activity","termid":"GO:0090562"}


id: PBO:0042582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion associated, oncogene regulated","termid":"PBO:0042582"}


id: GO:0102096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-6-deoxy-beta-L-mannose + N-acetyl-alpha-D-glucosaminyl-diphospho-trans,octacis-decaprenol = dTDP(3-) + alpha-L-Rhap-(1->3)-alpha-D-GlcpNAc-1-diphospho-trans,octacis-decaprenol + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"decaprenyl-N-acetyl-alpha-D-glucosaminyl-pyrophosphate:dTDP-alpha-L-rhamnose rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11070","RHEA:34487"],"termid":"GO:0102096"}


id: GO:0038179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by neurotrophin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Neurotrophins are a family of secreted growth factors that induce the survival, development, and function of neurons.","definition_xrefs":["GOC:jc","PMID:17466268","Wikipedia:Neurotrophin","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neurotrophin signaling pathway","synonyms":[{"name":"neurotrophin receptor signaling pathway","type":"exact"}],"termid":"GO:0038179"}


id: GO:0055125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that forms part of the nuclear pore complex, and is required for its correct assembly. In Saccharomyces cerevisiae Nic96 contains Nsp1p, Nup57p, Nup49p, and Nic96p.","definition_xrefs":["GOC:jh","PMID:15741174","PMID:12791264"],"gene_count":0,"genotype_count":0,"name":"obsolete Nic96 complex (obsolete GO:0055125)","synonyms":[{"name":"Nic96 complex","type":"exact"}],"termid":"GO:0055125"}


id: GO:0004099
data:
  {"annotated_genes":["SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93611],"is_not":false,"summary":null,"term":"GO:0004099"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: chitin + H2O = chitosan + acetate.","definition_xrefs":["EC:3.5.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0019213","GO:0016810"],"is_obsolete":false,"name":"chitin deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CHITIN-DEACETYLASE-RXN","RHEA:10464"],"synonyms":[{"name":"chitin amidohydrolase activity","type":"related"}],"termid":"GO:0004099","terms_by_termid":{"GO:0004099":null}}


id: FYECO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that includes heat shock, i.e. a step in which cells or samples are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping heat shock","termid":"FYECO:0000116"}


id: MONDO:0017778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A keratinization disorder characterized by the presence of large scales all over the body without significant erythroderma.","definition_xrefs":["Orphanet:313"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ichthyosis","termid":"MONDO:0019269"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"lamellar ichthyosis","secondary_identifiers":["GARD:10803","MedDRA:10023686","UMLS:C5848247","icd11.foundation:600146417","MEDGEN:1852191","NANDO:1200617","NCIT:C84805","NORD:1289"],"synonyms":[{"name":"LI","type":"exact"},{"name":"classic lamellar ichthyosis","type":"exact"},{"name":"congenital lamellar ichthyosis","type":"exact"}],"termid":"MONDO:0017778","xrefs":{"Monarch":{"xref_id":"0017778"}}}


id: FYPO:0000217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"abnormal DNA replication","synonyms":[{"name":"abnormal DNA-dependent DNA replication","type":"exact"}],"termid":"FYPO:0000217"}


id: SO:0001235
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region containing at least one unique origin of replication and a unique termination site.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replicon","secondary_identifiers":["http://en.wikipedia.org/wiki/Replicon_(genetics)"],"termid":"SO:0001235"}


id: FYPO:0007720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of SMN complex assembly is decreased.","definition_xrefs":["PMID:33754639","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal SMN complex assembly","termid":"FYPO:0007718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased SMN complex assembly","synonyms":[{"name":"decreased SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased SMN complex assembly during vegetative growth","type":"exact"},{"name":"reduced SMN complex assembly","type":"exact"}],"termid":"FYPO:0007720"}


id: PBO:0088146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs)","termid":"PBO:0088146"}


id: PBO:0114116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC ubiquitin ligase complex WD repeat subunit Rik1","termid":"PBO:0114116"}


id: PBO:0043187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1","termid":"PBO:0043187"}


id: PBO:0041481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 87","termid":"PBO:0041481"}


id: MONDO:0014156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the SCN2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 14","secondary_identifiers":["OMIM:615378","MEDGEN:815642","GARD:15955","UMLS:C3809312"],"synonyms":[{"name":"ATFB14","type":"related"},{"name":"SCN2B familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 14","type":"exact"},{"name":"atrial fibrillation, familial, type 14","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in SCN2B","type":"exact"}],"termid":"MONDO:0014156","xrefs":{"Monarch":{"xref_id":"0014156"}}}


id: PBO:0005708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc53 (predicted)","termid":"PBO:0005708"}


id: MONDO:0010197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Freeman-Sheldon syndrome","termid":"MONDO:0008675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"whistling face syndrome, recessive form","secondary_identifiers":["DOID:0111606","MESH:C536699","GARD:10024","MEDGEN:376364","OMIM:277720","UMLS:C1848470"],"synonyms":[{"name":"whistling face syndrome, recessive form","type":"exact"}],"termid":"MONDO:0010197","xrefs":{"Monarch":{"xref_id":"0010197"}}}


id: GO:0018033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal amide by hydrolysis and oxidation of an interior peptide in a secreted protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein C-terminal amidation (obsolete GO:0018033)","termid":"GO:0018033"}


id: PBO:0089812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,4-alpha-glucosidase","termid":"PBO:0089812"}


id: PBO:0086827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YOL131W has a paralog, STB1, that arose from the whole genome duplication","termid":"PBO:0086827"}


id: PBO:0068568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 19, pseudogene","termid":"PBO:0068568"}


id: GO:0047015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 2-methyl-3-hydroxybutyryl-CoA = NADH + H+ + 2-methylaceto-acetyl-CoA.","definition_xrefs":["MetaCyc:1.1.1.178-RXN","EC:1.1.1.178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity","secondary_identifiers":["RHEA:13281"],"synonyms":[{"name":"(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA:NAD+ oxidoreductase activity","type":"related"},{"name":"2-methyl-3-hydroxy-butyryl CoA dehydrogenase activity","type":"related"},{"name":"2-methyl-3-hydroxybutyryl coenzyme A dehydrogenase activity","type":"related"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase activity","type":"related"}],"termid":"GO:0047015"}


id: GO:0047239
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxymandelonitrile + UDP-D-glucose = H+ + taxiphyllin + UDP.","definition_xrefs":["RHEA:15961","EC:2.4.1.178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"hydroxymandelonitrile glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.178-RXN","KEGG_REACTION:R02709"],"synonyms":[{"name":"UDP-glucose:4-hydroxymandelonitrile glucosyltransferase activity","type":"related"},{"name":"UDPglucose:4-hydroxymandelonitrile glucosyltransferase activity","type":"related"},{"name":"cyanohydrin glucosyltransferase activity","type":"related"}],"termid":"GO:0047239"}


id: PR:O59668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RMD5 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03103","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LisH domain-containing protein C29A3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.03c","secondary_identifiers":["UniProtKB:O59668"],"synonyms":[{"name":"Spom972h-RMND5A","type":"exact"}],"termid":"PR:O59668"}


id: PBO:0030238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CDRE_promoter_in_response_to_calcium_ion","termid":"PBO:0030238"}


id: PBO:0056217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B18","termid":"PBO:0056217"}


id: MOD:00542
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:11698400","PubMed:11914093","Unimod:186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyphenylglyoxal arginine","synonyms":[{"name":"HPG","type":"related"},{"name":"Hydroxyphenylglyoxal arginine","type":"related"}],"termid":"MOD:00542"}


id: FYPO:0002634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cobalt ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cobalt","synonyms":[{"name":"resistance to cobalt during mitotic cell cycle","type":"related"},{"name":"resistance to cobalt during vegetative growth","type":"exact"},{"name":"resistance to cobalt ion","type":"exact"},{"name":"resistance to cobalt ions","type":"exact"},{"name":"resistant to cobalt","type":"exact"}],"termid":"FYPO:0002634"}


id: GO:0002060
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002055"}]},"cv_name":"molecular_function","definition":"Binding to a purine nucleobase, an organic nitrogenous base with a purine skeleton.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase binding","termid":"GO:0002054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"purine nucleobase binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"purine base binding","type":"exact"},{"name":"purine binding","type":"related"}],"termid":"GO:0002060","terms_by_termid":{"GO:0002055":null}}


id: PBO:0053114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 1 pseudogene 1","termid":"PBO:0053114"}


id: GO:0009578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of an etioplast but excluding the prothylakoid space. It contains the etioplast DNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"etioplast stroma","termid":"GO:0009578"}


id: GO:0061359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the activity of the Wnt signaling pathway by the controlled release of a Wnt protein from a cell.","definition_xrefs":["GOC:jl","PMID:19223472","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt signaling pathway by Wnt protein secretion (obsolete GO:0061359)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway by Wnt protein secretion","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway by Wnt protein secretion","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway by Wnt protein secretion","type":"exact"}],"termid":"GO:0061359"}


id: PBO:0071960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A1","termid":"PBO:0071960"}


id: PBO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp4 (predicted)","termid":"PBO:0000459"}


id: PBO:0059382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 7","termid":"PBO:0059382"}


id: PBO:0062188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily P member 4","termid":"PBO:0062188"}


id: GO:0034905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-chloro-4-hydroxy-2-oxopentanate = pyruvate + chloroacetaldehyde.","definition_xrefs":["UM-BBD_reactionID:r1437"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-chloro-4-hydroxy-2-oxopentanate aldolase activity (obsolete GO:0034905)","termid":"GO:0034905"}


id: GO:0075175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cAMP-mediated signaling in response to host (obsolete GO:0075175)","synonyms":[{"name":"positive regulation of cAMP-mediated signal transduction in response to host","type":"exact"},{"name":"positive regulation of cAMP-mediated signalling in response to host","type":"exact"},{"name":"positive regulation of symbiont cAMP-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075175"}


id: GO:1900483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting to vacuolar membrane.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of protein targeting to membrane","termid":"GO:0090313"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"regulates","term_name":"protein targeting to vacuolar membrane","termid":"GO:0044395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006605","GO:0006810"],"is_obsolete":false,"name":"regulation of protein targeting to vacuolar membrane","termid":"GO:1900483"}


id: PBO:0029991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_thiamine","termid":"PBO:0029991"}


id: MONDO:0800045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome, familial, Behcet-like","termid":"MONDO:0031384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome, familial, Behcet-like 1","secondary_identifiers":["OMIM:616744","UMLS:C4225218","GARD:17848","MEDGEN:898541","Orphanet:476102","DOID:0080944","Orphanet:674762"],"synonyms":[{"name":"AISBL","type":"broad"},{"name":"Behçet-like disease due to HA20","type":"exact"},{"name":"Behçet-like disease due to haploinsufficiency of A20","type":"exact"},{"name":"autoinflammatory syndrome, familial, Behcet-like","type":"broad"},{"name":"autoinflammatory syndrome, familial, Behcet-like 1","type":"exact"},{"name":"hereditary paediatric Behçet-like disease","type":"exact"},{"name":"hereditary pediatric Behçet-like disease","type":"exact"}],"termid":"MONDO:0800045","xrefs":{"Monarch":{"xref_id":"0800045"}}}


id: SO:0000626
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Regions of the chromosome that are important for regulating binding of chromosomes to the nuclear matrix.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_regulatory_element","synonyms":[{"name":"chromosomal regulatory element","type":"exact"}],"termid":"SO:0000626"}


id: PBO:0032760
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously thought to function in initiation","termid":"PBO:0032760"}


id: MONDO:0003811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant mixed epithelial tumor of the ovary. It is characterized by the presence of more than one epithelial cell type, most often serous and endocervical-type mucinous.","definition_xrefs":["NCIT:C4508"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian seromucinous tumor","secondary_identifiers":["DOID:6211","SCTID:254855000","MEDGEN:83409","UMLS:C0346166"],"synonyms":[{"name":"mixed epithelial neoplasm of ovary","type":"exact"},{"name":"mixed epithelial neoplasm of the ovary","type":"exact"},{"name":"mixed epithelial tumor of ovary","type":"exact"},{"name":"mixed epithelial tumor of the ovary","type":"exact"},{"name":"mixed epithelial tumour of ovary","type":"exact"},{"name":"mixed epithelial tumour of the ovary","type":"exact"},{"name":"ovarian Seromucinous tumor","type":"exact"},{"name":"ovarian Seromucinous tumour","type":"exact"},{"name":"ovarian mixed epithelial neoplasm","type":"exact"},{"name":"ovarian mixed epithelial tumor","type":"exact"},{"name":"ovarian mixed epithelial tumour","type":"exact"}],"termid":"MONDO:0003811","xrefs":{"Monarch":{"xref_id":"0003811"}}}


id: PBO:0066889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 189","termid":"PBO:0066889"}


id: GO:0045625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 1 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"regulates","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 1 cell differentiation","synonyms":[{"name":"regulation of T-helper 1 cell development","type":"related"}],"termid":"GO:0045625"}


id: PBO:0048605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB10 interacting GYF protein 1","termid":"PBO:0048605"}


id: GO:0098531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity regulated by binding to a ligand and that modulates the transcription of specific genes and gene sets. Examples include the lac and trp repressors in E.coli and steroid hormone receptors.","definition_xrefs":["GOC:dos","PMID:8735275","PMID:25568920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0003674","GO:0140110","GO:0003700"],"is_obsolete":false,"name":"ligand-modulated transcription factor activity","synonyms":[{"name":"direct ligand regulated sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"ligand-activated transcription factor activity","type":"narrow"},{"name":"transcription factor activity, direct ligand regulated sequence-specific DNA binding","type":"exact"}],"termid":"GO:0098531"}


id: MONDO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tungiasis (obsolete MONDO:0000300)","termid":"MONDO:0000300","xrefs":{"Monarch":{"xref_id":"0000300"}}}


id: PBO:0060067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 14","termid":"PBO:0060067"}


id: MONDO:0014283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the TNC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 56","secondary_identifiers":["UMLS:C3810170","OMIM:615629","GARD:18137","MEDGEN:816500","DOID:0110581"],"synonyms":[{"name":"DFNA56","type":"narrow"},{"name":"TNC autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 56","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 56","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in TNC","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 56","type":"narrow"},{"name":"deafness, autosomal dominant 56","type":"narrow"},{"name":"deafness, autosomal dominant type 56","type":"narrow"}],"termid":"MONDO:0014283","xrefs":{"Monarch":{"xref_id":"0014283"}}}


id: PBO:0082499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of class II HDA1 histone deacetylase complex; role in azole resistance via Hsp90p, and in heat shock response; Hda1p interacts with Hda2p-Hda3p subcomplex to form an active tetramer; deletion increases histone H2B, H3 and H4 acetylation; the HDA1 histone deacetylase complex regulates aging through trehalose metabolism","termid":"PBO:0082499"}


id: GO:0140782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of novofumigatonin, a heavily oxygenated meroterpenoid containing a unique orthoester moiety.","definition_xrefs":["PMID:29968715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"novofumigatonin biosynthetic process","synonyms":[{"name":"novofumigatonin anabolism","type":"exact"},{"name":"novofumigatonin biosynthesis","type":"exact"},{"name":"novofumigatonin formation","type":"exact"},{"name":"novofumigatonin synthesis","type":"exact"}],"termid":"GO:0140782"}


id: PBO:0084377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Long chain fatty acyl-CoA synthetase; activates imported fatty acids with a preference for C16:0-C18:0 chain lengths; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery","termid":"PBO:0084377"}


id: GO:1990671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi medial cisterna. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["PMID:24119662","GOC:bhm","PMID:16038056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"vesicle fusion with Golgi medial cisterna membrane","termid":"GO:1990671"}


id: MOD:00424
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-pyridylethyl-L-cysteine.","definition_xrefs":["PubMed:8783016","OMSSA:112","DeltaMass:253","PubMed:11760118","PubMed:626389","Unimod:31#C","PubMed:8297018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-pyridylethyl-L-cysteine","synonyms":[{"name":"PECys","type":"exact"},{"name":"Pyridylethyl","type":"related"},{"name":"Pyridylethyl Cystenyl","type":"exact"},{"name":"S-pyridinylethyl-L-cysteine","type":"exact"},{"name":"S-pyridylethylation","type":"related"},{"name":"spyridylethylc","type":"exact"},{"name":"vinylpyridine derivatized cysteine residue","type":"exact"}],"termid":"MOD:00424"}


id: PBO:0047826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXO6 antisense RNA 1","termid":"PBO:0047826"}


id: PBO:0068704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 85, pseudogene","termid":"PBO:0068704"}


id: GO:0046651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a lymphocyte population by cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell proliferation","termid":"GO:0032943"},{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte proliferation","termid":"GO:0046651"}


id: FYPO:0005709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body","termid":"FYPO:0002967"},{"relation_name":"is_a","term_name":"normal protein localization during mitosis","termid":"FYPO:0004328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body during mitosis","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body during mitosis","type":"exact"},{"name":"normal protein localization to mitotic SPB during mitosis","type":"exact"},{"name":"normal protein localization to mitotic spindle pole body during mitotic M phase","type":"related"},{"name":"normal protein localization to mitotic spindle pole body during mitotic nuclear division","type":"exact"},{"name":"normal protein localization to spindle pole body during mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0005709"}


id: PBO:0025492
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile neuronal ceroid lipofuscinosis","termid":"PBO:0025492"}


id: MONDO:0004772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iridocyclitis","termid":"MONDO:0004773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucomatocyclitic crisis","secondary_identifiers":["UMLS:C0152138","DOID:9378","Orphanet:636950","ICD9:364.22","MEDGEN:508902","SCTID:29538005"],"synonyms":[{"name":"Posner-Schlossman syndrome","type":"exact"},{"name":"Terrien-Viel syndrome","type":"exact"},{"name":"glaucomatocyclitic crisis disease","type":"exact"}],"termid":"MONDO:0004772","xrefs":{"Monarch":{"xref_id":"0004772"}}}


id: GO:0015431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + glutathione S-conjugate(in) -> ADP + phosphate + glutathione S-conjugate(out).","definition_xrefs":["RHEA:19121","GOC:jl","PMID:1455517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type glutathione S-conjugate transporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-358","GO:0071997","EC:7.6.2.3"],"synonyms":[{"name":"ATP-dependent glutathione S-conjugate export pump","type":"exact"},{"name":"ATPase-coupled glutathione S-conjugate transmembrane transporter activity","type":"related"},{"name":"GS-X pump","type":"exact"},{"name":"MRP1/GS-X pump","type":"exact"},{"name":"conjugate transporter activity","type":"broad"},{"name":"glutathione S-conjugate-exporting ATPase activity","type":"narrow"},{"name":"glutathione S-conjugate-transporting ATPase activity","type":"related"}],"termid":"GO:0015431"}


id: PBO:0033798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0033798"}


id: PBO:0011084
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, Mg2+ Km 3.0 mM","termid":"PBO:0011084"}


id: PBO:0060479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 1","termid":"PBO:0060479"}


id: PBO:0087218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold protein; assists in association of proteasome core particle with regulatory particle; inhibitor of proteasome in vivo and in vitro; inhibits proteasomal ATPase activity; degraded by the mature proteasome after assembly; contains HEAT-like repeats; protein increases in abundance and relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087218"}


id: SO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Rearranged genomic DNA of immunoglobulin/T-cell receptor gene including L-part1, V-intron and V-J-exon, with the 5'UTR (SO:0000204) and 3'UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VJ_gene_segment","synonyms":[{"name":"V-J-GENE","type":"exact"},{"name":"VJ gene","type":"exact"}],"termid":"SO:0000576"}


id: GO:0007449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the proximal/distal axis of the imaginal disc. Imaginal disks are masses of hypodermic cells, carried by the larvae of some insects after leaving the egg, from which masses the wings and legs of the adult are subsequently formed.","definition_xrefs":["GOC:jid","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation","termid":"GO:0009954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation, imaginal disc","termid":"GO:0007449"}


id: MONDO:0018375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary avascular necrosis","termid":"MONDO:0018374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traumatic avascular necrosis","secondary_identifiers":["GARD:21660","MEDGEN:1802844","Orphanet:399175","UMLS:C5680037","icd11.foundation:822486319"],"synonyms":[{"name":"traumatic AVN","type":"exact"}],"termid":"MONDO:0018375","xrefs":{"Monarch":{"xref_id":"0018375"}}}


id: PBO:0086238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that is required for vacuolar H+-ATPase (V-ATPase) function; peripheral membrane protein; not an actual component of the V-ATPase complex; functions in the assembly of the V-ATPase; localized to the yeast endoplasmic reticulum (ER)","termid":"PBO:0086238"}


id: FYPO:0003072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of primary amine oxidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal primary amine oxidase activity","synonyms":[{"name":"decreased copper amine oxidase activity","type":"narrow"}],"termid":"FYPO:0003072"}


id: MONDO:0007211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly - arterial hypertension is a rare genetic brachydactyly syndrome characterized by the association of brachydactyly type E with hypertension (due to vascular or neurovascular anomalies) as well as the additional features of short stature and low birth weight (compared to non-affected family members), stocky build and a round face. The onset of hypertension is often in childhood and, if untreated, most patients will have had a stroke by the age of 50.","definition_xrefs":["Orphanet:1276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachydactyly-arterial hypertension syndrome","secondary_identifiers":["GARD:967","MESH:C537095","DOID:0111247","SCTID:720568003","MEDGEN:349445","OMIM:112410","UMLS:C1862170"],"synonyms":[{"name":"Bilginturan brachydactyly","type":"exact"},{"name":"Bilginturan syndrome","type":"exact"},{"name":"HTNB","type":"related"},{"name":"brachydactyly type E with short stature and hypertension","type":"related"},{"name":"brachydactyly type E, with short stature and hypertension","type":"exact"},{"name":"brachydactyly with hypertension","type":"related"},{"name":"brachydactyly, type E, with short stature and hypertension","type":"related"},{"name":"hypertension and brachydactyly syndrome","type":"related"}],"termid":"MONDO:0007211","xrefs":{"Monarch":{"xref_id":"0007211"}}}


id: MONDO:0017781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 12p deletion","termid":"MONDO:0022174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"12p12.1 microdeletion syndrome","secondary_identifiers":["GARD:17414","Orphanet:313884","UMLS:C4755260","MEDGEN:1652598"],"synonyms":[{"name":"Del(12)(p12.1)","type":"exact"},{"name":"monosomy 12p12.1","type":"exact"}],"termid":"MONDO:0017781","xrefs":{"Monarch":{"xref_id":"0017781"}}}


id: MONDO:1010284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"},{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allergic rhinitis, non-human animal","secondary_identifiers":["OMIA:000027"],"termid":"MONDO:1010284","xrefs":{"Monarch":{"xref_id":"1010284"}}}


id: PBO:0090268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap123","termid":"PBO:0090268"}


id: PBO:0057782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2909","termid":"PBO:0057782"}


id: MONDO:0007181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial osteosclerosis","termid":"MONDO:0042973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axial osteomalacia","secondary_identifiers":["MEDGEN:354730","UMLS:C1862372","MESH:C537791","DOID:0080039","OMIM:109130"],"synonyms":[{"name":"atypical osteomalacia involving the axial skeleton","type":"related"},{"name":"axial osteomalacia","type":"exact"}],"termid":"MONDO:0007181","xrefs":{"Monarch":{"xref_id":"0007181"}}}


id: PBO:0054031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1362","termid":"PBO:0054031"}


id: PBO:0070306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 12","termid":"PBO:0070306"}


id: GO:0044778
data:
  {"annotated_genes":["SJAG_02771","SJAG_04287","SJAG_03026","SJAG_00364"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80724],"is_not":false,"summary":null,"term":"GO:0044778"},{"annotations":[118040,93263,108543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"}]},"cv_name":"biological_process","definition":"A signal transduction process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA during meiosis. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and ends with signal transduction.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"},{"relation_name":"is_a","term_name":"meiotic cell cycle checkpoint signaling","termid":"GO:0033313"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"meiotic DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"meiotic DNA integrity checkpoint","type":"exact"}],"termid":"GO:0044778","terms_by_termid":{"GO:0033315":null,"GO:0044778":null}}


id: MONDO:1010690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, pig","secondary_identifiers":["OMIA:000038-9823"],"termid":"MONDO:1010690","xrefs":{"Monarch":{"xref_id":"1010690"}}}


id: PBO:0049067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 84","termid":"PBO:0049067"}


id: PBO:0078512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 6","termid":"PBO:0078512"}


id: GO:0008781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + N-acylneuraminate = diphosphate + CMP-N-acylneuraminate.","definition_xrefs":["EC:2.7.7.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"N-acylneuraminate cytidylyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9990","Reactome:R-HSA-4084982","RHEA:11344"],"synonyms":[{"name":"CMP-N-acetylneuraminate synthase activity","type":"related"},{"name":"CMP-N-acetylneuraminate synthetase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid synthase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid synthetase activity","type":"related"},{"name":"CMP-NANA synthetase activity","type":"related"},{"name":"CMP-Neu5Ac synthetase activity","type":"related"},{"name":"CMP-NeuAc synthetase activity","type":"related"},{"name":"CMP-NeuNAc synthetase activity","type":"related"},{"name":"CMP-sialate diphosphorylase activity","type":"related"},{"name":"CMP-sialate pyrophosphorylase activity","type":"related"},{"name":"CMP-sialate synthase activity","type":"related"},{"name":"CMP-sialate synthetase activity","type":"related"},{"name":"CMP-sialic acid synthetase activity","type":"related"},{"name":"CMP-sialic synthetase activity","type":"related"},{"name":"CTP:N-acylneuraminate cytidylyltransferase activity","type":"exact"},{"name":"acetylneuraminate cytidylyltransferase activity","type":"related"},{"name":"acylneuraminate cytidyltransferase activity","type":"related"},{"name":"cytidine 5'-monophospho-N-acetylneuraminic acid synthetase activity","type":"related"},{"name":"cytidine 5'-monophosphosialic acid synthetase activity","type":"related"},{"name":"cytidine 5-monophosphate N-acetylneuraminic acid synthetase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminic synthetase activity","type":"related"},{"name":"cytidine monophosphosialate pyrophosphorylase activity","type":"related"},{"name":"cytidine monophosphosialate synthetase activity","type":"related"},{"name":"cytidine monophosphosialic acid synthetase activity","type":"related"}],"termid":"GO:0008781"}


id: MONDO:0016498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute pure sensory neuropathy","secondary_identifiers":["UMLS:C5190881","GARD:20616","MEDGEN:1682724","Orphanet:231450"],"synonyms":[{"name":"acute pure sensory GBS","type":"exact"},{"name":"acute pure sensory Guillain-Barre syndrome","type":"exact"},{"name":"acute pure sensory Guillain-Barré syndrome","type":"exact"}],"termid":"MONDO:0016498","xrefs":{"Monarch":{"xref_id":"0016498"}}}


id: PBO:0069271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 527, pseudogene","termid":"PBO:0069271"}


id: PBO:0056041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene C4 synthase","termid":"PBO:0056041"}


id: PBO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex subunit Eaf6 (predicted)","termid":"PBO:0001709"}


id: PBO:0078776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-8","termid":"PBO:0078776"}


id: PBO:0017536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Tls1","termid":"PBO:0017536"}


id: MONDO:0004142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of large cell neuroendocrine lung carcinoma characterized by the presence of large neuroendocrine cells in combination with adenocarcinoma, squamous cell carcinoma, giant cell carcinoma and/ or spindle cell carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary large cell neuroendocrine carcinoma","termid":"MONDO:0003960"},{"relation_name":"is_a","term_name":"combined lung carcinoma","termid":"MONDO:0006167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung combined large cell neuroendocrine carcinoma","secondary_identifiers":["NCIT:C7267","MEDGEN:232386","UMLS:C1333122","DOID:7207"],"synonyms":[{"name":"combined large cell lung neuroendocrine carcinoma","type":"exact"},{"name":"combined large cell neuroendocrine carcinoma of lung","type":"exact"},{"name":"combined large cell neuroendocrine carcinoma of the lung","type":"exact"},{"name":"pulmonary combined large cell neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0004142","xrefs":{"Monarch":{"xref_id":"0004142"}}}


id: PBO:0059839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTFR2 pseudogene 1","termid":"PBO:0059839"}


id: PBO:0076448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 4","termid":"PBO:0076448"}


id: GO:0015708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of silicates from outside of a cell, across the plasma membrane and into the cytosol. Silicates are the salts of silicic acids, and are usually composed of silicon and oxygen (Si[x]O[y]), one or more metals, and possibly hydrogen. Types of silicate include unisilicates, metasilicates and hydrous silicates.","definition_xrefs":["GOC:krc","PMID:16572174","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion import across plasma membrane","termid":"GO:0098658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"silicic acid import across plasma membrane","secondary_identifiers":["GO:1902067","GO:0051207"],"synonyms":[{"name":"silicate transport","type":"broad"},{"name":"silicic acid import","type":"related"},{"name":"silicic acid transport","type":"exact"},{"name":"silicon uptake","type":"related"}],"termid":"GO:0015708"}


id: GO:0098596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Learning in which new behaviors are acquired through imitation.","definition_xrefs":["Wikipedia:Imitative_learning&oldid=593192364","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"observational learning","termid":"GO:0098597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imitative learning","secondary_identifiers":["Wikipedia:Observational_learning#Observational_learning_compared_to_imitation","Wikipedia:Imitative_learning"],"termid":"GO:0098596"}


id: MONDO:1012907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy due to abnormal glycosylation of α-dystroglycan that occurs in dogs due to a mutation in the LARGE1 gene.","definition_xrefs":["PMID:34654610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy, LARGE1-related, dog","secondary_identifiers":["OMIA:002460-9615"],"termid":"MONDO:1012907","xrefs":{"Monarch":{"xref_id":"1012907"}}}


id: PBO:0028696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing_at_telomere","termid":"PBO:0028696"}


id: PBO:0080413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS41 subunit of HOPS complex","termid":"PBO:0080413"}


id: GO:0097529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a myeloid leukocyte within or between different tissues and organs of the body.","definition_xrefs":["PMID:22342843","GOC:cvs","PMID:24157461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid leukocyte migration","termid":"GO:0097529"}


id: PBO:0068910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 153, pseudogene","termid":"PBO:0068910"}


id: GO:0004165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: a (3Z)-enoyl-CoA = a 4-saturated (2E)-enoyl-CoA or a (3E)-enoyl-CoA = a 4-saturated (2E)-enoyl-CoA.","definition_xrefs":["RHEA:45900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"delta(3)-delta(2)-enoyl-CoA isomerase activity","secondary_identifiers":["GO:0008461","EC:5.3.3.8","Reactome:R-HSA-109338","Reactome:R-HSA-6809808"],"synonyms":[{"name":"3,2-trans-enoyl-CoA isomerase activity","type":"related"},{"name":"acetylene-allene isomerase activity","type":"related"},{"name":"delta(3),delta(2)-enoyl-CoA isomerase activity","type":"related"},{"name":"delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase activity","type":"related"},{"name":"delta3,delta2-enoyl-CoA isomerase activity","type":"related"},{"name":"delta3-cis-delta2-trans-enoyl-CoA isomerase","type":"exact"},{"name":"delta3-delta2 enoyl-CoA isomerase activity","type":"exact"},{"name":"dodecenoyl-CoA (3Z)-(2E)-isomerase activity","type":"narrow"},{"name":"dodecenoyl-CoA D-isomerase activity","type":"narrow"},{"name":"dodecenoyl-CoA delta-isomerase activity","type":"narrow"},{"name":"dodecenoyl-CoA delta3-cis-delta2-trans-isomerase activity","type":"narrow"},{"name":"dodecenoyl-CoA isomerase activity","type":"related"}],"termid":"GO:0004165"}


id: PBO:0014583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-containing RNAs endoribonuclease (predicted)","termid":"PBO:0014583"}


id: PBO:0085678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in producing mature rRNAs and snoRNAs; involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the small subunit processome complex, which is required for processing of pre-18S rRNA","termid":"PBO:0085678"}


id: GO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Progressive reduction in length of the telomeres, the termini of eukaryotic chromosomes, that occurs as part of the cellular aging process.","definition_xrefs":["GOC:jh","PMID:9891807"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent telomere shortening (obsolete GO:0001309)","synonyms":[{"name":"age-dependent telomere shortening","type":"exact"}],"termid":"GO:0001309"}


id: FYPO:0004686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to streptothricin. Cells stop growing (and may die) at a concentration of streptothricin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to streptothricin","synonyms":[{"name":"hypersensitive to streptothricin","type":"exact"},{"name":"sensitive to streptothricin during mitotic cell cycle","type":"related"},{"name":"sensitive to streptothricin during vegetative growth","type":"exact"}],"termid":"FYPO:0004686"}


id: GO:0140604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the coenzyme mycofactocin, a variably glycosylated small molecule electron pair carrier derived from the C-terminal valine-tyrosine dipeptide of the ribosomally translated precursor peptide MftA.","definition_xrefs":["PMID:31381312","PMID:21223593","PMID:30778644","PMID:33014324","PMID:30183269","PMID:27312813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mycofactocin biosynthetic process","termid":"GO:0140604"}


id: GO:0048767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the root hair grows longer.","definition_xrefs":["PMID:12468740","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"root hair cell development","termid":"GO:0080147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair elongation","termid":"GO:0048767"}


id: PBO:0046498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERH pseudogene 1","termid":"PBO:0046498"}


id: PBO:0086338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudogenic fragment with similarity to flocculins; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; YHR213W-B has a paralog, YAR064W, that arose from a segmental duplication","termid":"PBO:0086338"}


id: PBO:0076688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 5","termid":"PBO:0076688"}


id: PBO:0053002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMC1 antisense RNA 1","termid":"PBO:0053002"}


id: PBO:0039981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 4","termid":"PBO:0039981"}


id: GO:0106283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + ursodeoxycholate = 7-oxolithocholate + H+ + NADH.","definition_xrefs":["PMID:12917011","RHEA:42028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ursodeoxycholate 7-beta-dehydrogenase (NAD+) activity","termid":"GO:0106283"}


id: PBO:0072643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTEL1-TNFRSF6B readthrough (NMD candidate)","termid":"PBO:0072643"}


id: GO:1901052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sarcosine.","definition_xrefs":["GOC:yaf","PMID:17951379","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"sarcosine metabolic process","synonyms":[{"name":"sarcosine metabolism","type":"exact"}],"termid":"GO:1901052"}


id: GO:0060649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland bud grows along its axis.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"mammary gland bud morphogenesis","termid":"GO:0060648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland bud elongation","termid":"GO:0060649"}


id: PBO:0002736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD phosphatase Fcp1","termid":"PBO:0002736"}


id: MONDO:0006529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bullous skin disease (obsolete MONDO:0006529)","termid":"MONDO:0006529","xrefs":{"Monarch":{"xref_id":"0006529"}}}


id: PBO:0005580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hir protein binding region","termid":"PBO:0005580"}


id: MONDO:0016523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bronchogenic cysts (BCs) are congenital malformations resulting from abnormal budding of the foregut and are most commonly found in the mediastinum.","definition_xrefs":["Orphanet:2357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchogenic cyst","secondary_identifiers":["icd11.foundation:355400995","MESH:D001994","UMLS:C0006281","GARD:1025","MedDRA:10064585","MEDGEN:668","HP:0100730"],"synonyms":[{"name":"bronchogenic cyst","type":"exact"},{"name":"bronchogenic cyst (disease)","type":"exact"}],"termid":"MONDO:0016523","xrefs":{"Monarch":{"xref_id":"0016523"}}}


id: PBO:0051988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"janus kinase and microtubule interacting protein 1","termid":"PBO:0051988"}


id: MONDO:0002373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign proliferative neoplasm made up of epithelial and mesenchymal cells of the mesothelium which make up part of the serosal covering and lining of various organ surfaces within the body.","definition_xrefs":["PMID:30285380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesothelioma","termid":"MONDO:0005065"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign mesothelioma","secondary_identifiers":["UMLS:C0348424","ICD9:215.9","DOID:2645","MESH:D008654","ICD10CM:C45","SCTID:254825007","NCIT:C3234","MEDGEN:578420"],"synonyms":[{"name":"benign tumor of mesothelial tissue","type":"exact"},{"name":"benign tumor of mesothelium","type":"exact"},{"name":"benign tumour of mesothelial tissue","type":"exact"},{"name":"benign tumour of mesothelium","type":"exact"},{"name":"mesothelioma, benign","type":"exact"}],"termid":"MONDO:0002373","xrefs":{"Monarch":{"xref_id":"0002373"}}}


id: PBO:0054523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1923","termid":"PBO:0054523"}


id: PBO:0080080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 42","termid":"PBO:0080080"}


id: PBO:0029037
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_surface","termid":"PBO:0029037"}


id: PBO:0061330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B8","termid":"PBO:0061330"}


id: PBO:0078622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 71","termid":"PBO:0078622"}


id: PBO:0066406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELA divergent transcript","termid":"PBO:0066406"}


id: PBO:0042306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule","termid":"PBO:0042306"}


id: PBO:0075547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPECC1 pseudogene 1","termid":"PBO:0075547"}


id: PBO:0035720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_protein_coding_gene_during_vegetative_growth","termid":"PBO:0035720"}


id: PBO:0070129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 43 pseudogene","termid":"PBO:0070129"}


id: PBO:0070705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 10","termid":"PBO:0070705"}


id: PBO:0078676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (TTT) 9-1","termid":"PBO:0078676"}


id: GO:0032768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of a monooxygenase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of monooxygenase activity (obsolete GO:0032768)","termid":"GO:0032768"}


id: GO:2001003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of pectin catabolic process","synonyms":[{"name":"regulation of pectin breakdown","type":"exact"},{"name":"regulation of pectin catabolism","type":"exact"},{"name":"regulation of pectin degradation","type":"exact"}],"termid":"GO:2001003"}


id: MONDO:0006806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the pars plana.","definition_xrefs":["NCIT:C35110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveitis","termid":"MONDO:0020283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"intermediate uveitis","secondary_identifiers":["EFO:1000986","MESH:D015867","SCTID:314429009","MedDRA:10022557","DOID:12732","GARD:21065","Orphanet:279914","MEDGEN:22596","UMLS:C0042166","HP:0012124"],"synonyms":[{"name":"IU","type":"exact"},{"name":"chronic cyclitis","type":"exact"},{"name":"intermediate uveitis","type":"exact"},{"name":"intermediate uveitis (disease)","type":"exact"},{"name":"pars planitis","type":"narrow"},{"name":"peripheral uveoretinitis","type":"exact"}],"termid":"MONDO:0006806","xrefs":{"Monarch":{"xref_id":"0006806"}}}


id: PATO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity quality inhering in a bearer by virtue of the bearer's exposure to radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity to irradiation","termid":"PATO:0001806"}


id: PBO:0028282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mating-type_region_heterochromatin","termid":"PBO:0028282"}


id: GO:0043757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + adenosylcobyric acid + (R)-1-aminopropan-2-yl phosphate = ADP + phosphate + adenosylcobinamide phosphate, and ATP + adenosylcobyric acid + (R)-1-aminopropan-2-ol = ADP + phosphate + adenosylcobinamide.","definition_xrefs":["EC:6.3.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"adenosylcobinamide-phosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-6261","RHEA:21896"],"synonyms":[{"name":"AdoCbi-P synthase activity","type":"related"},{"name":"CbiB","type":"related"},{"name":"adenosylcobyric acid:(R)-1-aminopropan-2-yl phosphate ligase (ADP-forming)","type":"exact"}],"termid":"GO:0043757"}


id: GO:0003942
data:
  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73165],"is_not":false,"summary":null,"term":"GO:0003942"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-L-glutamate 5-semialdehyde + NADP+ + phosphate = N-acetyl-5-glutamyl phosphate + NADPH + H+.","definition_xrefs":["RHEA:21588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetyl-gamma-glutamyl-phosphate reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.2.1.38","MetaCyc:N-ACETYLGLUTPREDUCT-RXN"],"synonyms":[{"name":"N-acetyl-L-glutamate gamma-semialdehyde:NADP oxidoreductase (phosphorylating)","type":"related"},{"name":"N-acetyl-L-glutamate-5-semialdehyde:NADP+ 5-oxidoreductase (phosphorylating)","type":"related"},{"name":"N-acetyl-glutamate semialdehyde dehydrogenase activity","type":"related"},{"name":"N-acetylglutamate 5-semialdehyde dehydrogenase activity","type":"related"},{"name":"N-acetylglutamic gamma-semialdehyde dehydrogenase activity","type":"related"},{"name":"NAGSA dehydrogenase activity","type":"broad"},{"name":"reductase, acetyl-gamma-glutamyl phosphate","type":"related"}],"termid":"GO:0003942","terms_by_termid":{"GO:0003942":null}}


id: GO:0019122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of peptidyl-D-alanine, by either racemization or from peptidyl-L-serine.","definition_xrefs":["RESID:AA0191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"},{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"peptidyl-D-alanine racemization","synonyms":[{"name":"alanine racemization","type":"broad"}],"termid":"GO:0019122"}


id: PBO:0076851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed metallothionein like protein","termid":"PBO:0076851"}


id: PBO:0052534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 7","termid":"PBO:0052534"}


id: PBO:0064380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 2","termid":"PBO:0064380"}


id: GO:0034741
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the tumor suppressor protein adenomatous polyposis coli (APC), alpha-tubulin, gamma-tubulin, and the Rac1 and Cdc42 effector IQGAP1; may play a role in cytoskeleton organization.","definition_xrefs":["PMID:17126424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"APC-tubulin-IQGAP1 complex","synonyms":[{"name":"60S APC complex","type":"narrow"}],"termid":"GO:0034741"}


id: PBO:0053338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 205","termid":"PBO:0053338"}


id: GO:0098638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any laminin protein binding that occurs as part of cell-matrix adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin binding","termid":"GO:0043236"},{"relation_name":"is_a","term_name":"cell-matrix adhesion mediator activity","termid":"GO:0098634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515","GO:0098631"],"is_obsolete":false,"name":"laminin binding involved in cell-matrix adhesion","termid":"GO:0098638"}


id: PBO:0031464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_bismuth","termid":"PBO:0031464"}


id: GO:0140773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-tetradecanoyl-L-lysyl-[protein] + NAD+ + H2O = tetradecanoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["RHEA:70567","PMID:23552949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"NAD-dependent protein demyristoylase activity","termid":"GO:0140773"}


id: PBO:0048529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 5","termid":"PBO:0048529"}


id: GO:0032111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of an inactive protein histidine kinase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of protein histidine kinase activity (obsolete GO:0032111)","synonyms":[{"name":"protein histidine kinase activator","type":"related"}],"termid":"GO:0032111"}


id: PBO:0109609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A24","termid":"PBO:0109609"}


id: PBO:0068605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 56, pseudogene","termid":"PBO:0068605"}


id: PBO:0061364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 24","termid":"PBO:0061364"}


id: PBO:0086605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression repressed in carbon limited vs carbon replete chemostat cultures; non-essential gene; contains a PH-like domain; RBH2 has a paralog, RBH1, that arose from the whole genome duplication","termid":"PBO:0086605"}


id: GO:0050893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural process required for an organism to sense and interpret the dimensions of a sensory experience: modality, location, intensity and affect.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cognition","termid":"GO:0050890"},{"relation_name":"part_of","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory processing","termid":"GO:0050893"}


id: PBO:0080126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 4","termid":"PBO:0080126"}


id: GO:1903680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an acinar cell of sebaceous gland.","definition_xrefs":["PMID:19944183","PMID:18334552","GO_REF:0000086","GOC:TermGenie","PMID:17018284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sebaceous gland cell differentiation","termid":"GO:0001949"},{"relation_name":"is_a","term_name":"acinar cell differentiation","termid":"GO:0090425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acinar cell of sebaceous gland differentiation","synonyms":[{"name":"sebocyte differentiation","type":"exact"}],"termid":"GO:1903680"}


id: PBO:0002937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3i","termid":"PBO:0002937"}


id: MONDO:0011422
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87308],"is_not":false,"summary":null,"term":"MONDO:0011422"}]},"cv_name":"mondo","definition":"Autosomal recessive proximal renal tubular acidosis (AR pRTA) is a rare form of proximal renal tubular acidosis (pRTA) characterized by an isolated defect in the proximal tubule leading to the decreased reabsorption of bicarbonate and consequentially to urinary bicarbonate wastage along with additional characteristic clinical features.","definition_xrefs":["Orphanet:93607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"proximal renal tubular acidosis","termid":"MONDO:0008369"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"autosomal recessive proximal renal tubular acidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:370883","GARD:16826","MESH:C567038","OMIM:604278","UMLS:C1970309"],"synonyms":[{"name":"AR pRTA","type":"exact"},{"name":"RTA, proximal, autosomal recessive","type":"related"},{"name":"proximal renal tubular acidosis with ocular abnormalities and intellectual disability","type":"exact"},{"name":"proximal renal tubular acidosis, autosomal recessive","type":"exact"},{"name":"renal tubular acidosis, proximal, with ocular abnormalities","type":"exact"},{"name":"renal tubular acidosis, proximal, with ocular abnormalities and intellectual disability","type":"related"},{"name":"renal tubular acidosis, proximal, with ocular abnormalities and mental retardation","type":"related"}],"termid":"MONDO:0011422","terms_by_termid":{"MONDO:0011422":null},"xrefs":{"Monarch":{"xref_id":"0011422"}}}


id: MONDO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the glandular epithelium of the cecal mucosa. It is characterized by a villous architectural pattern. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C5520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cecal neoplasm","termid":"MONDO:0005694"},{"relation_name":"is_a","term_name":"villous adenoma of colon","termid":"MONDO:0021271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cecum villous adenoma","secondary_identifiers":["EFO:1000155","DOID:0050910","MEDGEN:272438","UMLS:C1332869"],"synonyms":[{"name":"caecum adenoma","type":"related"},{"name":"caecum villous adenoma","type":"exact"},{"name":"cecal villous adenoma","type":"exact"},{"name":"cecum adenoma","type":"broad"},{"name":"cecum villous adenoma","type":"exact"},{"name":"villous adenoma of cecum","type":"exact"},{"name":"villous adenoma of the cecum","type":"exact"}],"termid":"MONDO:0000525","xrefs":{"Monarch":{"xref_id":"0000525"}}}


id: PBO:0047888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(p25.1)","termid":"PBO:0047888"}


id: GO:0030620
data:
  {"annotated_genes":["SJAG_05240","SJAG_03547","SJAG_03210","SJAG_03460","SJAG_01327","SJAG_04497","SJAG_03954","SJAG_02185","SJAG_03070","SJAG_02469","SJAG_01819"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75948,77813,79146,97689,108278,110484,114626,114861,116924,117857,118392],"is_not":false,"summary":null,"term":"GO:0030620"}]},"cv_name":"molecular_function","definition":"Binding to a U2 small nuclear RNA (U2 snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_01819":null,"SJAG_02185":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03460":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_04497":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"U2 snRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030620","terms_by_termid":{"GO:0030620":null}}


id: PBO:0051480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (V)-66 (pseudogene)","termid":"PBO:0051480"}


id: PBO:0074879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 59A","termid":"PBO:0074879"}


id: GO:1990806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by activation of a ligand-gated ion channel on the surface of a cell. The pathway begins with binding of an extracellular ligand to a ligand-gated ion channel and ends with a molecular function that directly regulates a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:25869137","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ligand-gated ion channel signaling pathway","synonyms":[{"name":"ligand-gated ion channel signalling pathway","type":"exact"}],"termid":"GO:1990806"}


id: GO:0008828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dATP + H2O = dAMP + H+ + diphosphate.","definition_xrefs":["GOC:pde","PMID:11139615","RHEA:28334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0047429","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dATP diphosphatase activity","secondary_identifiers":["MetaCyc:RXN0-384","EC:3.6.1.56","GO:0044713","GO:0044714"],"synonyms":[{"name":"2-hydroxy-(d)ATP pyrophosphatase activity","type":"exact"},{"name":"2-hydroxy-(deoxy)adenosine-triphosphate pyrophosphatase activity","type":"exact"},{"name":"2-hydroxy-ATP pyrophosphatase activity","type":"related"},{"name":"2-hydroxy-adenosine triphosphate pyrophosphatase activity","type":"related"},{"name":"dATP pyrophosphohydrolase activity","type":"exact"}],"termid":"GO:0008828"}


id: PBO:0040506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advillin","termid":"PBO:0040506"}


id: SO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence that is involved in the control of a biological process.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Regulatory_region"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"regulatory region","type":"exact"}],"termid":"SO:0005836"}


id: PBO:0067748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 47","termid":"PBO:0067748"}


id: PBO:0048633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 1 pseudogene 1","termid":"PBO:0048633"}


id: GO:1905756
data:
  {"annotated_genes":["SJAG_04597","SJAG_03048","SJAG_04776","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[96262,89338,94260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of primary cell septum biogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27898700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic division septum assembly","termid":"GO:0140279"},{"relation_name":"regulates","term_name":"primary cell septum biogenesis","termid":"GO:0031671"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"regulation of primary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905756","terms_by_termid":{"GO:1905757":null,"GO:1905758":null}}


id: MONDO:0800386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to organophosphate.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organophosphate poisoning","synonyms":[{"name":"insecticide poisoning","type":"exact"},{"name":"organophosphate exposure","type":"exact"}],"termid":"MONDO:0800386","xrefs":{"Monarch":{"xref_id":"0800386"}}}


id: MONDO:0956976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic asthma that is characterized by the pathophysiology phenotype combination (endotype) of non-atopic, smoking, obesity related, and elderly and that is characterized by neutrophilic (sputum neutrophils > 40–60%) or paucigranulocytic (i.e., normal sputum levels of both eosinophils and neutrophils) inflammation and a lack of response to corticosteroid therapy.","definition_xrefs":["DOID:0080818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic asthma","termid":"MONDO:0850282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T2-low asthma","termid":"MONDO:0956976","xrefs":{"Monarch":{"xref_id":"0956976"}}}


id: PBO:0087114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated protein; proposed to act in protein synthesis, nuclear pore complex biogenesis and maintenance as well as protein folding and prion maintenance; ; has similarity to the mammalian BAG-1 protein","termid":"PBO:0087114"}


id: MONDO:0800025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disease characterized by hypertelorism with facial features that can closely resemble craniofrontonasal dysplasia, such as prominent forehead, widow's peak, heavy and broad eyebrows, long palpebral fissures, ptosis, high and broad nasal bridge, short nose, low-set ears, natal teeth, thin upper lip and a grooved chin, as well as limb (i.e. fifth-finger clinodactyly, pes adductus, mild interdigital webbing), urogenital (i.e. bilateral cryptorchidism and shawl scrotum in males) and umbilical (i.e. hernia/small omphalocele) anomalies and cardiac (i.e. ventricular or atrial septal defect, patent ductus arteriosus) defects. Additional findings such as polycystic kidneys and iridochorioretinal colobomas have also been reported and psychomotor development is normal. The facial features can also resemble Aarskog and Opitz G/BBB syndromes.","definition_xrefs":["Orphanet:1519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Teebi hypertelorism syndrome","termid":"MONDO:0030639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Teebi hypertelorism syndrome 1","secondary_identifiers":["SCTID:724284005","DOID:0080698","GARD:957","OMIM:145420"],"synonyms":[{"name":"Brachycephalofrontonasal dysplasia","type":"exact"},{"name":"Teebi hypertelorism syndrome","type":"broad"},{"name":"Teebi syndrome","type":"broad"},{"name":"craniofrontonasal dysplasia, Teebi type","type":"exact"},{"name":"hypertelorism, Teebi type","type":"broad"}],"termid":"MONDO:0800025","xrefs":{"Monarch":{"xref_id":"0800025"}}}


id: GO:0061385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of fibroblasts, resulting in the expansion of a fibroblast population that contributes to the shaping of the heart.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast proliferation","termid":"GO:0048144"},{"relation_name":"is_a","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast proliferation involved in heart morphogenesis","termid":"GO:0061385"}


id: SO:0002128
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mitochondrial rRNA is an RNA component of the small or large subunits of mitochondrial ribosomes.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA","termid":"SO:0000252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_rRNA","synonyms":[{"name":"Mt rRNA","type":"exact"},{"name":"Mt_rRNA","type":"exact"},{"name":"mitochondrial rRNA","type":"exact"},{"name":"mitochondrial_rRNA","type":"exact"}],"termid":"SO:0002128"}


id: MONDO:0008371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pigmentation disease characterized by a reticulate pattern of abnormally dark skin coloring, particularly in the body's folds and creases.","definition_xrefs":["DOID:0060256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reticulate pigment disorder","termid":"MONDO:0000118"},{"relation_name":"is_a","term_name":"disorder of fucoglycosan synthesis","termid":"MONDO:0017747"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0005093"],"is_obsolete":false,"name":"Dowling-Degos disease","secondary_identifiers":["MESH:C562924","icd11.foundation:15123132","GARD:9775","MEDGEN:811363","Orphanet:79145","MedDRA:10068651","SCTID:239133004","UMLS:C3714534"],"synonyms":[{"name":"DDD1","type":"related"},{"name":"Dowling-Degos Kitamura disease","type":"related"},{"name":"Dowling-Degos disease 1","type":"related"},{"name":"Dowling-Degos disease type 1","type":"exact"},{"name":"dark dot disease","type":"exact"},{"name":"reticular pigment anomaly of flexures","type":"exact"}],"termid":"MONDO:0008371","xrefs":{"Monarch":{"xref_id":"0008371"}}}


id: MONDO:0017018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated pauciimmune pulmonary capillaritis is a small vessel vasculitis restricted to the lungs that may induce diffuse alveolar hemorrhage with dyspnea, anemia, chest pain, hemoptysis, bilateral and diffuse alveolar infiltrates at chest X-rays, without any underlying systemic disease. ANCA are frequently positive but could be negative.","definition_xrefs":["Orphanet:264691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated pulmonary capillaritis","secondary_identifiers":["MEDGEN:842738","SCTID:707436001","icd11.foundation:1607123556","icd11.foundation:1610022220","UMLS:C3873357","ICD9:448.9","GARD:20924"],"termid":"MONDO:0017018","xrefs":{"Monarch":{"xref_id":"0017018"}}}


id: MONDO:0009098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dextrocardia with unusual facies and microphthalmia","secondary_identifiers":["MESH:C538269","MEDGEN:346559","UMLS:C1857298","OMIM:221950"],"synonyms":[{"name":"Aughton syndrome","type":"related"},{"name":"dextrocardia with unusual facies and microphthalmia","type":"exact"},{"name":"dextrocardia, microphthalmia, cleft palate, choreoathetosis and intellectual disability","type":"related"},{"name":"dextrocardia, microphthalmia, cleft palate, choreoathetosis and mental retardation","type":"related"}],"termid":"MONDO:0009098","xrefs":{"Monarch":{"xref_id":"0009098"}}}


id: GO:0102839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-16:2-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102839)","termid":"GO:0102839"}


id: GO:0070431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing 2 (NOD2) protein receptor, and ending with regulation of a downstream cellular process.","definition_xrefs":["PMID:17944960","PMID:18585455","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"NOD2 signaling pathway","type":"exact"},{"name":"nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070431"}


id: PBO:0109812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protoporphyrinogen IX import factor, TMEM14 family","termid":"PBO:0109812"}


id: MONDO:0019104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sandifer syndrome is a paroxysmal dystonic movement disorder occurring in association with gastro-oesophageal reflux, and, in some cases, hiatal hernia.","definition_xrefs":["Orphanet:71272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sandifer syndrome","secondary_identifiers":["SCTID:230314007","GARD:9684","NCIT:C113397","UMLS:C0338465","MEDGEN:90922","MESH:C537234","MedDRA:10066142"],"synonyms":[{"name":"Sandifer's syndrome","type":"related"}],"termid":"MONDO:0019104","xrefs":{"Monarch":{"xref_id":"0019104"}}}


id: GO:0032757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-8 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-8 production","termid":"GO:0032677"},{"relation_name":"positively_regulates","term_name":"interleukin-8 production","termid":"GO:0032637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-8 production","secondary_identifiers":["GO:0045416","GO:2000484"],"synonyms":[{"name":"activation of interleukin-8 production","type":"narrow"},{"name":"positive regulation of IL-8 production","type":"exact"},{"name":"positive regulation of interleukin-8 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-8 secretion","type":"narrow"},{"name":"stimulation of interleukin-8 production","type":"narrow"},{"name":"up regulation of interleukin-8 production","type":"exact"},{"name":"up-regulation of interleukin-8 production","type":"exact"},{"name":"upregulation of interleukin-8 production","type":"exact"}],"termid":"GO:0032757"}


id: FYPO:0002518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to cell cycle checkpoint signaling does not occur. Abolished arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"},{"relation_name":"is_a","term_name":"abnormal response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002517"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"abolished response to mitotic cell cycle checkpoint signaling","synonyms":[{"name":"abolished cell cycle checkpoint arrest","type":"related"},{"name":"cell cycle arrest resulting from mitotic cell cycle checkpoint activation abolished","type":"exact"}],"termid":"FYPO:0002518"}


id: PBO:0040875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP2 inducible kinase","termid":"PBO:0040875"}


id: MONDO:0004570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Twisting of a loop of bowel that results in intestinal obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal obstruction","termid":"MONDO:0004565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal volvulus","secondary_identifiers":["ICD9:560.2","SCTID:9707006","MEDGEN:21892","UMLS:C0042961","MESH:D045822","ICD10CM:K56.2","DOID:8445"],"synonyms":[{"name":"intestinal volvulus","type":"exact"},{"name":"twist of intestine, bowel, or colon","type":"exact"},{"name":"volvulus","type":"exact"}],"termid":"MONDO:0004570","xrefs":{"Monarch":{"xref_id":"0004570"}}}


id: PATO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A split shape quality inhering in a bearer by virtue of the bearer's having or being divided into many lobes or similar segments.","direct_ancestors":[{"relation_name":"is_a","term_name":"split","termid":"PATO:0001786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifid","termid":"PATO:0002231"}


id: PBO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_evidence_for","termid":"PBO:0034322"}


id: PBO:0075483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily D member 1","termid":"PBO:0075483"}


id: GO:0071317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to isoquinoline alkaloid","termid":"GO:0014072"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to isoquinoline alkaloid","termid":"GO:0071317"}


id: PBO:0078168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta diversity 1","termid":"PBO:0078168"}


id: MONDO:0004704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal disease (obsolete MONDO:0004704)","termid":"MONDO:0004704","xrefs":{"Monarch":{"xref_id":"0004704"}}}


id: PBO:0084249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in the de novo synthesis of GTP; member of a four-gene family in S. cerevisiae, constitutively expressed; IMD3 has a paralog, IMD4, that arose from the whole genome duplication","termid":"PBO:0084249"}


id: PBO:0064692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 28","termid":"PBO:0064692"}


id: MONDO:0016264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatitis caused by autoantibodies. Drugs, infections, and toxins may trigger the production of the autoantibodies against the liver parenchyma.","definition_xrefs":["NCIT:C27029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"autoimmune disorder of exocrine system","termid":"MONDO:0000586"},{"relation_name":"is_a","term_name":"autoimmune disorder of gastrointestinal tract","termid":"MONDO:0000588"},{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"autoimmune hepatitis","secondary_identifiers":["GARD:5871","Orphanet:2137","NANDO:2100264","SCTID:408335007","ICD10CM:K75.4","UMLS:C4721555","NANDO:1200441","EFO:0005676","DOID:2048","NANDO:1200442","icd11.foundation:1235727122","MEDGEN:1666753","MedDRA:10003827","MESH:D019693","NORD:1897","ICD9:571.42"],"synonyms":[{"name":"AIH","type":"related"},{"name":"autoimmune chronic active hepatitis","type":"narrow"},{"name":"autoimmune chronic hepatitis","type":"related"},{"name":"autoimmune hepatitis","type":"exact"},{"name":"autoimmune hepatitis with centrilobular necrosis","type":"narrow"},{"name":"autoimmune liver disease","type":"broad"},{"name":"chronic autoimmune hepatitis","type":"narrow"}],"termid":"MONDO:0016264","xrefs":{"Monarch":{"xref_id":"0016264"}}}


id: GO:0046298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4-dichlorobenzoate metabolic process","termid":"GO:0018898"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2,4-dichlorobenzoate catabolic process","synonyms":[{"name":"2,4-dichlorobenzoate breakdown","type":"exact"},{"name":"2,4-dichlorobenzoate catabolism","type":"exact"},{"name":"2,4-dichlorobenzoate degradation","type":"exact"}],"termid":"GO:0046298"}


id: PBO:0058043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4264","termid":"PBO:0058043"}


id: GO:0050480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-(4-oxo-4,5-dihydro-1H-imidazol-5-yl)propanoic acid + H2O = N-formimidoyl-L-glutamate + H+.","definition_xrefs":["EC:3.5.2.7","RHEA:23660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"imidazolonepropionase activity","secondary_identifiers":["MetaCyc:IMIDAZOLONEPROPIONASE-RXN","KEGG_REACTION:R02288"],"synonyms":[{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate amidohydrolase activity","type":"related"},{"name":"4(5)-imidazolone-5(4)-propionic acid hydrolase activity","type":"related"},{"name":"imidazolone propionic acid hydrolase activity","type":"related"},{"name":"imidazolone-5-propionate hydrolase activity","type":"related"}],"termid":"GO:0050480"}


id: GO:1900008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.","definition_xrefs":["GOC:TermGenie","PMID:15020466"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:1900008)","synonyms":[{"name":"down regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"down regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"down regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging","type":"related"},{"name":"down regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"},{"name":"negative regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"negative regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"negative regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:1900008"}


id: PBO:0034431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_G0_to_G1_transition","termid":"PBO:0034431"}


id: PBO:0067166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 219, pseudogene","termid":"PBO:0067166"}


id: FYPO:0008088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the oscillations of homologous chromosomes which occurs at meiotic metaphase I is abolished.","definition_xrefs":["PMID:33529549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome oscillation at meiotic metaphase I","termid":"FYPO:0008098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished chromosome oscillation at meiotic metaphase I","synonyms":[{"name":"loss of chromosome oscillation at meiotic metaphase I","type":"exact"}],"termid":"FYPO:0008088"}


id: PBO:0050179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1","termid":"PBO:0050179"}


id: PBO:0056448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3","termid":"PBO:0056448"}


id: MONDO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete radioulnar synostosis with amegakaryocytic thrombocytopenia (obsolete MONDO:0000205)","termid":"MONDO:0000205","xrefs":{"Monarch":{"xref_id":"0000205"}}}


id: PBO:0064281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M2","termid":"PBO:0064281"}


id: PBO:0081561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 485","termid":"PBO:0081561"}


id: PBO:0026744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_UV","termid":"PBO:0026744"}


id: MONDO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of depression characterized by the inability to find pleasure in positive things combined with physical agitation, insomnia, or decreased appetite.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"depressive disorder","termid":"MONDO:0002050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melancholia","secondary_identifiers":["UMLS:C0025193","NCIT:C34812","DOID:2848","EFO:1002014","MEDGEN:6288"],"synonyms":[{"name":"depression with melancholic features","type":"exact"},{"name":"melancholic depression","type":"exact"}],"termid":"MONDO:0002444","xrefs":{"Monarch":{"xref_id":"0002444"}}}


id: FYECO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a xenobiotic substrate was added to the medium or assay buffer in excess compared to standard medium or assay buffers. A xenobiotic substrate is a macromolecular substrate which is not synthesised by S. pombe.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ xenobiotic substrate","termid":"FYECO:0000061"}


id: GO:0160114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure which joins the B1 protofilament of the B tubule to the A10 and A11 protofilaments of the A tubule within an axonemal microtubule doublet.","definition_xrefs":["GOC:krc","PMID:29430673","PMID:37295417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal microtubule doublet outer junction","termid":"GO:0160114"}


id: GO:0042436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of compounds that contain an indole (2,3-benzopyrrole) skeleton.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole-containing compound catabolic process","synonyms":[{"name":"indole derivative catabolic process","type":"exact"},{"name":"indole derivative catabolism","type":"exact"},{"name":"indole-containing compound breakdown","type":"exact"},{"name":"indole-containing compound catabolism","type":"exact"},{"name":"indole-containing compound degradation","type":"exact"}],"termid":"GO:0042436"}


