# terms

id: PR:O14174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt20 gene.","definition_xrefs":["UniProtKB:O14174","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit spt20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.10c","synonyms":[{"name":"Spom972h-spt20","type":"exact"}],"termid":"PR:O14174"}


id: FYPO:0001838
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121150,121154],"is_not":false,"summary":null,"term":"FYPO:0001838"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551"],"single_locus_genotype_uniquenames":["pck2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001838","terms_by_termid":{"FYPO:0001838":null}}


id: PBO:0091849
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CLA4","termid":"PBO:0091849"}


id: PBO:0038899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor B1","termid":"PBO:0038899"}


id: MOD:01717
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino- or imino-hydrogen with a Proteome Sciences TMT6plex reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex reporter+balance reagent N-acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01717"}


id: PBO:0047496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A pseudogene 4","termid":"PBO:0047496"}


id: PBO:0041380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C5a receptor 1","termid":"PBO:0041380"}


id: PBO:0069290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 546, pseudogene","termid":"PBO:0069290"}


id: PBO:0049966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 12","termid":"PBO:0049966"}


id: MONDO:0024487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process affecting the nail.","definition_xrefs":["NCIT:C78493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nail disorder","termid":"MONDO:0002884"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nail infection","secondary_identifiers":["MEDGEN:87467","UMLS:C0343026"],"synonyms":[{"name":"nail infection","type":"exact"}],"termid":"MONDO:0024487","xrefs":{"Monarch":{"xref_id":"0024487"}}}


id: PBO:0050968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 2","termid":"PBO:0050968"}


id: GO:0021501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the prechordal plate. The prechordal plate is a thickening of the endoderm at the cranial end of the primitive streak formed by the involution of Spemann's organizer cells. The prechordal plate and the notochord induce the formation of the neural plate from the overlying ectodermal cells.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prechordal plate formation","termid":"GO:0021501"}


id: MONDO:0007295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood-onset epilepsy syndrome that is characterized by onset of seizures between 3 and 14 years (peak 8-9 years) that usually resolve by age 13 years, but can occasionally occur up to age 18 years of age. Both sexes are affected. Antecedent, birth and neonatal history is normal. A history of febrile seizure (in 5-15%) may be seen. A history of Panayiotopoulos syndrome may be present in a very small number of cases. Neurological exam and head size is normal. Development and cognition prior to onset of seizures is normal. During the course of the active epilepsy, behavioral and neuropsychological deficits may be found, particularly in language and executive functioning. These deficits improve when seizures remit.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"Landau-Kleffner syndrome","termid":"MONDO:0009509"},{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"},{"relation_name":"is_a","term_name":"childhood-onset self-limited focal epilepsy syndrome","termid":"MONDO:0800502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"self-limited epilepsy with centrotemporal spikes","secondary_identifiers":["GARD:10287","Orphanet:1945","UMLS:C0376532","DOID:3329","SCTID:44145005","MEDGEN:138210","ICD9:345.80","NCIT:C116538","icd11.foundation:1046279423","OMIM:117100"],"synonyms":[{"name":"BCECTS","type":"exact"},{"name":"BECRS","type":"exact"},{"name":"BECTS","type":"exact"},{"name":"BRE","type":"exact"},{"name":"Rolandic epilepsy","type":"exact"},{"name":"benign Rolandic epilepsy","type":"exact"},{"name":"benign Rolandic epilepsy (BRE)","type":"exact"},{"name":"benign Rolandic epilepsy of childhood (BREC)","type":"exact"},{"name":"benign childhood epilepsy with centrotemporal spike","type":"exact"},{"name":"benign childhood epilepsy with centrotemporal spikes","type":"exact"},{"name":"benign epilepsy of childhood with centrotemporal spikes","type":"exact"},{"name":"benign epilepsy of childhood with centrotemporal spikes (BECCT)","type":"related"},{"name":"benign epilepsy with centro-temporal spikes (BECTS)","type":"related"},{"name":"benign epilepsy with centrotemporal spikes","type":"exact"},{"name":"benign familial epilepsy of childhood with rolandic spikes","type":"exact"},{"name":"centralopathic epilepsy","type":"exact"},{"name":"centrotemporal epilepsy","type":"exact"},{"name":"centrotemporal epilepsy, isolated cases","type":"exact"},{"name":"childhood epilepsy with centrotemporal spikes","type":"exact"},{"name":"sylvan seizures","type":"exact"},{"name":"temporal-central focal epilepsy","type":"exact"}],"termid":"MONDO:0007295","xrefs":{"Monarch":{"xref_id":"0007295"}}}


id: MONDO:0000631
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"}]},"cv_name":"mondo","definition":"A neoplasm that arises from the bone or articular cartilage and does not invade adjacent tissues or metastasize to other anatomic sites.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"is_obsolete":false,"name":"bone benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0684516","ICD9:213.9","MEDGEN:146337","DOID:0060094","NCIT:C4880","SCTID:92027006"],"synonyms":[{"name":"benign bone neoplasm","type":"exact"},{"name":"benign bone tumor","type":"exact"},{"name":"benign bone tumour","type":"exact"},{"name":"benign neoplasm of bone","type":"exact"},{"name":"benign neoplasm of the bone","type":"exact"},{"name":"benign osseous neoplasm","type":"exact"},{"name":"benign osseous tumor","type":"exact"},{"name":"benign osseous tumour","type":"exact"},{"name":"benign tumor of bone","type":"exact"},{"name":"benign tumor of the bone","type":"exact"},{"name":"benign tumour of bone","type":"exact"},{"name":"benign tumour of the bone","type":"exact"},{"name":"bone tissue benign neoplasm","type":"exact"}],"termid":"MONDO:0000631","terms_by_termid":{"MONDO:0010621":null},"xrefs":{"Monarch":{"xref_id":"0000631"}}}


id: GO:0031754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-1 sphingosine 1-phosphate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Edg-1 sphingosine 1-phosphate receptor binding","synonyms":[{"name":"Edg-1 sphingosine 1-phosphate receptor ligand","type":"narrow"}],"termid":"GO:0031754"}


id: PBO:0075668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 3","termid":"PBO:0075668"}


id: PBO:0029454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_N-glycan_processing","termid":"PBO:0029454"}


id: PBO:0080306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 70 pseudogene","termid":"PBO:0080306"}


id: PBO:0069730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1011, pseudogene","termid":"PBO:0069730"}


id: PBO:0004793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Vps20","termid":"PBO:0004793"}


id: PBO:0068482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 63, pseudogene","termid":"PBO:0068482"}


id: FYPO:0002419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and do not divide before dying.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, without cell division (obsolete FYPO:0002419)","synonyms":[{"name":"inviable germinated spore population, without cell division","type":"exact"},{"name":"inviable population of undivided germinated spores","type":"exact"}],"termid":"FYPO:0002419"}


id: MONDO:0957263
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88376],"is_not":false,"summary":null,"term":"MONDO:0957263"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure syndrome, telomere-related, 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620367","MEDGEN:1841132","UMLS:C5830496"],"termid":"MONDO:0957263","terms_by_termid":{"MONDO:0957263":null},"xrefs":{"Monarch":{"xref_id":"0957263"}}}


id: PBO:0072124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 1","termid":"PBO:0072124"}


id: PBO:0046460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial stromal interaction 1","termid":"PBO:0046460"}


id: GO:0043568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of insulin-like growth factor receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of insulin-like growth factor receptor signaling pathway","termid":"GO:0043567"},{"relation_name":"positively_regulates","term_name":"insulin-like growth factor receptor signaling pathway","termid":"GO:0048009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of insulin-like growth factor receptor signaling pathway","synonyms":[{"name":"activation of insulin-like growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of IGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of IGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of insulin-like growth factor receptor signalling pathway","type":"exact"},{"name":"stimulation of insulin-like growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of insulin-like growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0043568"}


id: MONDO:0030929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"},{"relation_name":"is_a","term_name":"autosomal dominant primary microcephaly","termid":"MONDO:0007988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"microcephaly 27, primary, autosomal dominant","secondary_identifiers":["UMLS:C5543051","OMIM:619180","GARD:16433","MEDGEN:1783457"],"synonyms":[{"name":"MCPH27","type":"exact"},{"name":"microcephaly 27, primary, autosomal dominant","type":"exact"}],"termid":"MONDO:0030929","xrefs":{"Monarch":{"xref_id":"0030929"}}}


id: PBO:0069476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 743, pseudogene","termid":"PBO:0069476"}


id: MONDO:0030057
data:
  {"annotated_genes":["SJAG_01022"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87164],"is_not":false,"summary":null,"term":"MONDO:0030057"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01022":null},"genotype_count":0,"is_obsolete":false,"name":"neurodevelopmental, jaw, eye, and digital syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18523","UMLS:C5394477","MEDGEN:1712714","OMIM:618914"],"synonyms":[{"name":"NEDJED","type":"exact"},{"name":"NEURODEVELOPMENTAL, JAW, EYE, AND DIGITAL SYNDROME","type":"exact"},{"name":"neurodevelopmental, jaw, eye, and digital syndrome","type":"exact"}],"termid":"MONDO:0030057","terms_by_termid":{"MONDO:0030057":null},"xrefs":{"Monarch":{"xref_id":"0030057"}}}


id: MONDO:0002723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cutaneous mastocytosis (obsolete MONDO:0002723)","synonyms":[{"name":"obsolete cutaneous mastocytosis (disease)","type":"exact"}],"termid":"MONDO:0002723","xrefs":{"Monarch":{"xref_id":"0002723"}}}


id: GO:1900583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of o-orsellinic acid.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"o-orsellinic acid metabolic process","termid":"GO:1900582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"o-orsellinic acid catabolic process","synonyms":[{"name":"o-orsellinic acid breakdown","type":"exact"},{"name":"o-orsellinic acid catabolism","type":"exact"},{"name":"o-orsellinic acid degradation","type":"exact"}],"termid":"GO:1900583"}


id: GO:0061493
data:
  {"annotated_genes":["SJAG_04901","SJAG_02795","SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98732,100144,101732],"is_not":false,"summary":null,"term":"GO:0061493"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the inner plaque is on the nuclear face of the spindle pole body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central plaque of spindle pole body","termid":"GO:0005823"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02246":null,"SJAG_02795":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0015630","GO:0005816","GO:0005575"],"is_obsolete":false,"name":"central plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061493","terms_by_termid":{"GO:0061493":null}}


id: SO:0001107
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet in which the main chains of two consecutive residues are H-bonded to that of the third, and in which the dihedral angles are as follows: Residue(i): -140 degrees < phi(l) -20 degrees , -90 degrees < psi(l) < 40 degrees. Residue (i+1): -180 degrees < phi < -25 degrees or +120 degrees < phi < +180 degrees, +40 degrees < psi < +180 degrees or -180 degrees < psi < -120 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge","secondary_identifiers":["http://en.wikipedia.org/wiki/Beta_bulge","BS:00208"],"synonyms":[{"name":"beta bulge","type":"exact"}],"termid":"SO:0001107"}


id: PBO:0062607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 2","termid":"PBO:0062607"}


id: PBO:0086687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0086687"}


id: PBO:0064220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C delta 1","termid":"PBO:0064220"}


id: MONDO:0012051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic periodontitis","termid":"MONDO:0005593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodontitis, aggressive, 2","secondary_identifiers":["OMIM:608526","MESH:C566946","MEDGEN:370671","UMLS:C1969478"],"synonyms":[{"name":"periodontitis, aggressive, 2","type":"exact"},{"name":"periodontitis, aggressive, type 2","type":"exact"}],"termid":"MONDO:0012051","xrefs":{"Monarch":{"xref_id":"0012051"}}}


id: GO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the tricuspid valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve development","termid":"GO:0003171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricuspid valve development","termid":"GO:0003175"}


id: PBO:0043204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase, mitochondrial 1B","termid":"PBO:0043204"}


id: FYPO:0007511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell undergoes normal (i.e. indistinguishable from wild type) mitosis upon release from a following release from a G2/M cell cycle block imposed by activation of the mitotic DNA replication checkpoint.","definition_xrefs":["PomBase:mah","PMID:17690116","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitosis","termid":"FYPO:0001007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitosis following cell cycle arrest in response to mitotic DNA replication checkpoint","synonyms":[{"name":"normal mitosis following cell cycle arrest in response to DNA replication checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitosis following cell cycle arrest in response to mitotic DNA replication checkpoint during vegetative growth","type":"exact"},{"name":"normal mitosis following release from a mitotic DNA replication cell cycle block","type":"exact"}],"termid":"FYPO:0007511"}


id: PBO:0113026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; promotes nutrient responsive growth via the Ras-cAMP signaling pathway; phosphorylates and inhibits histone demethylase Jhd2p in response to glucose, promoting H3K4 trimethylation and maintaining H3K14 acetylation by preventing chromatin binding of Rpd3p; required for Sfl1p-mediated pseudohyphal growth; partially redundant with Tpk1p and Tpk3p; localizes to P-bodies during stationary phase; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0113026"}


id: PATO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Being supported by a peduncle or stalk.","definition_xrefs":["PATOC:GV"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pedunculate","termid":"PATO:0002388"}


id: PBO:0088842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex subunit Rqc2","termid":"PBO:0088842"}


id: PBO:0052340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 1A","termid":"PBO:0052340"}


id: PBO:0062123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 1","termid":"PBO:0062123"}


id: PBO:0071905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 43","termid":"PBO:0071905"}


id: GO:0030404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete collagenase 3 activity (obsolete GO:0030404)","synonyms":[{"name":"MMP-13","type":"exact"},{"name":"collagenase 3 activity","type":"exact"},{"name":"matrix metalloproteinase 13","type":"exact"}],"termid":"GO:0030404"}


id: GO:0090436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an leaf pavement cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a leaf pavement cell fate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf pavement cell development","termid":"GO:0090436"}


id: PBO:0068607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 58, pseudogene","termid":"PBO:0068607"}


id: PBO:0052386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 26A","termid":"PBO:0052386"}


id: PBO:0086840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein with sequence similar to hydroxyacid dehydrogenases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086840"}


id: PBO:0048873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A5","termid":"PBO:0048873"}


id: MONDO:0018492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A manifestation of von Hippel-Lindau disease or other familial renal cell cancer syndromes that present as a malignant epithelial neoplasm of the kidney. It is characterized by the presence of lipid-containing clear cells within a vascular network. The tumor usually is bilateral and polycentric, and metastasizes to unusual sites. Late metastasis is common.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal cell carcinoma","termid":"MONDO:0003008"},{"relation_name":"is_a","term_name":"clear cell renal carcinoma","termid":"MONDO:0005005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"hereditary clear cell renal cell carcinoma","secondary_identifiers":["UMLS:C1333985","GARD:9571","MEDGEN:234343","NCIT:C36260","DOID:7192","Orphanet:422526","SCTID:764961009"],"synonyms":[{"name":"Hereditary clear cell renal cell cancer","type":"exact"},{"name":"hereditary clear cell renal carcinoma","type":"exact"},{"name":"hereditary clear cell renal cell adenocarcinoma","type":"exact"},{"name":"hereditary clear cell renal cell carcinoma","type":"exact"},{"name":"hereditary conventional (clear cell) renal cell carcinoma","type":"exact"},{"name":"hereditary conventional renal cell carcinoma","type":"related"}],"termid":"MONDO:0018492","xrefs":{"Monarch":{"xref_id":"0018492"}}}


id: PBO:0081187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc fingers and homeoboxes 3","termid":"PBO:0081187"}


id: PBO:0072784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaffold attachment factor B2","termid":"PBO:0072784"}


id: MONDO:0012647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete generalized epilepsy with febrile seizures plus, type 3 (obsolete MONDO:0012647)","termid":"MONDO:0012647","xrefs":{"Monarch":{"xref_id":"0012647"}}}


id: GO:0050961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a temperature stimulus is received and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus","termid":"GO:0016048"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"part_of","term_name":"sensory perception of temperature stimulus","termid":"GO:0050951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of temperature stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of heat stimulus during sensory perception","type":"narrow"},{"name":"sensory detection of temperature stimulus","type":"exact"},{"name":"sensory detection of temperature stimulus during sensory perception","type":"exact"},{"name":"sensory detection of thermal stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of heat stimulus","type":"narrow"},{"name":"sensory perception, sensory detection of temperature stimulus","type":"exact"},{"name":"sensory perception, sensory detection of thermal stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of heat stimulus","type":"narrow"},{"name":"sensory perception, sensory transduction of temperature stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of thermal stimulus","type":"exact"},{"name":"sensory transduction of heat stimulus during sensory perception","type":"narrow"},{"name":"sensory transduction of temperature stimulus","type":"exact"},{"name":"sensory transduction of temperature stimulus during sensory perception","type":"exact"},{"name":"sensory transduction of thermal stimulus during sensory perception","type":"exact"}],"termid":"GO:0050961"}


id: SO:0000740
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a plastid such as a chloroplast.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_sequence","synonyms":[{"name":"plastid sequence","type":"exact"}],"termid":"SO:0000740"}


id: PBO:0076719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor like 5","termid":"PBO:0076719"}


id: MONDO:0007322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant chondrodysplasia punctata","termid":"MONDO:0007321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"chondrodysplasia punctata, tibial-metacarpal type","secondary_identifiers":["GARD:16715","Orphanet:79346","icd11.foundation:1513713461","MESH:C562961","UMLS:C0432224","MEDGEN:98147","NANDO:2201359","OMIM:118651","SCTID:254083002","ICD9:756.59"],"synonyms":[{"name":"chondrodysplasia punctata, Mt type","type":"related"},{"name":"chondrodysplasia punctata, tibia-metacarpal type","type":"related"}],"termid":"MONDO:0007322","xrefs":{"Monarch":{"xref_id":"0007322"}}}


id: FYPO:0003170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of arginine into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal arginine import","termid":"FYPO:0001654"},{"relation_name":"is_a","term_name":"increased amino acid import during vegetative growth","termid":"FYPO:0003169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased arginine import","synonyms":[{"name":"increased L-arginine import","type":"exact"},{"name":"increased L-arginine import across plasma membrane","type":"exact"},{"name":"increased L-arginine uptake","type":"exact"},{"name":"increased arginine import during mitotic cell cycle","type":"related"},{"name":"increased arginine import during vegetative growth","type":"exact"},{"name":"increased arginine import into cell","type":"exact"}],"termid":"FYPO:0003170"}


id: PBO:0048028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrous sheath CABYR binding protein","termid":"PBO:0048028"}


id: PBO:0068999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 243, pseudogene","termid":"PBO:0068999"}


id: PBO:0074203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC39A12 antisense RNA 1","termid":"PBO:0074203"}


id: PATO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000281 cytoplasmic sterility (obsolete PATO:0000281)","termid":"PATO:0000281"}


id: PBO:0044725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 13 (pseudogene)","termid":"PBO:0044725"}


id: PBO:0065034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 regulated carcinoma associated Stat3 activating long intergenic non-protein coding transcript","termid":"PBO:0065034"}


id: GO:1905615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11606552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of developmental vegetative growth","termid":"GO:1905613"},{"relation_name":"positively_regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of developmental vegetative growth","synonyms":[{"name":"activation of developmental vegetative growth","type":"narrow"},{"name":"up regulation of developmental vegetative growth","type":"exact"},{"name":"up-regulation of developmental vegetative growth","type":"exact"},{"name":"upregulation of developmental vegetative growth","type":"exact"}],"termid":"GO:1905615"}


id: FYPO:0006541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during mating is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during mating","synonyms":[{"name":"decreased protein accumulation during mating","type":"related"},{"name":"decreased protein level during conjugation with cellular fusion","type":"exact"},{"name":"reduced protein level during mating","type":"exact"}],"termid":"FYPO:0006541"}


id: GO:0070998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a gravitational stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of gravity","termid":"GO:0070998"}


id: MONDO:0011644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disorder of the cilliary body in the uvea that affects healthy, younger individuals who are often asymptomatic. It has a long clinical course with relapses and remissions. Symptoms include mildly decreased vision and floaters. It may be associated with autoimmune disorders.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary body disorder","termid":"MONDO:0002970"},{"relation_name":"is_a","term_name":"chorioretinitis","termid":"MONDO:0004674"},{"relation_name":"is_a","term_name":"intermediate uveitis","termid":"MONDO:0006806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pars planitis","secondary_identifiers":["UMLS:C0030593","MEDGEN:14623","MESH:D015868","OMIM:606177","SCTID:314428001","NCIT:C34903","EFO:1001088","icd11.foundation:127977237","DOID:12731","ICD9:363.21","MedDRA:10034052","GARD:7339"],"synonyms":[{"name":"familial pars planitis (subtype)","type":"related"},{"name":"inflammation of pars plana of ciliary body","type":"exact"},{"name":"pars plana of ciliary body inflammation","type":"exact"},{"name":"pars plana of ciliary bodyitis","type":"exact"},{"name":"pars planitis","type":"exact"},{"name":"peripheral retinal inflammation","type":"related"},{"name":"posterior cyclitis","type":"exact"}],"termid":"MONDO:0011644","xrefs":{"Monarch":{"xref_id":"0011644"}}}


id: GO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron that is part of the brainstem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noradrenergic neuron fate commitment","termid":"GO:0003359"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation involved in brainstem development","termid":"GO:0003361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron fate commitment involved in brainstem development","termid":"GO:0003362"}


id: PBO:0054594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1997","termid":"PBO:0054594"}


id: PBO:0030881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization_during_vegetative_growth","termid":"PBO:0030881"}


id: GO:0071588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of hydrogen peroxide (H2O2).","definition_xrefs":["GOC:mah","PMID:17043891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hydrogen peroxide mediated signaling pathway","synonyms":[{"name":"H2O2 mediated signaling pathway","type":"exact"},{"name":"hydrogen peroxide mediated signalling pathway","type":"exact"}],"termid":"GO:0071588"}


id: GO:1905884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of triglyceride transport.","definition_xrefs":["PMID:25849533","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of acylglycerol transport","termid":"GO:1901507"},{"relation_name":"is_a","term_name":"regulation of triglyceride transport","termid":"GO:1905883"},{"relation_name":"negatively_regulates","term_name":"triglyceride transport","termid":"GO:0034197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of triglyceride transport","synonyms":[{"name":"down regulation of triacylglycerol transport","type":"exact"},{"name":"down regulation of triglyceride transport","type":"exact"},{"name":"down-regulation of triacylglycerol transport","type":"exact"},{"name":"down-regulation of triglyceride transport","type":"exact"},{"name":"downregulation of triacylglycerol transport","type":"exact"},{"name":"downregulation of triglyceride transport","type":"exact"},{"name":"inhibition of triacylglycerol transport","type":"narrow"},{"name":"inhibition of triglyceride transport","type":"narrow"},{"name":"negative regulation of triacylglycerol transport","type":"exact"}],"termid":"GO:1905884"}


id: MONDO:0100072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal diabetes, congenital sensorineural hearing loss and congenital cataracts is characterized by the three primary phenotypes of neonatal diabetes, congenital sensorineural hearing loss and congenital cataracts. Cases have reported additional varying phenotypes, including optic atrophy, hypothyroidism, severe neonatal hypotonia in males, developmental delay, facial abnormalities, and a few other more rare phenotypes. The severity and congenital onset of the phenotypes distinguish these patients from Wolfram-like syndrome patients.","definition_xrefs":["PMID:27217304","PMID:28468959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal diabetes, congenital sensorineural hearing loss and congenital cataracts","termid":"MONDO:0100072","xrefs":{"Monarch":{"xref_id":"0100072"}}}


id: PBO:0064302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polo like kinase 5 (inactive)","termid":"PBO:0064302"}


id: PBO:0039115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha hemoglobin stabilizing protein","termid":"PBO:0039115"}


id: PBO:0080672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wolframin ER transmembrane glycoprotein","termid":"PBO:0080672"}


id: PBO:0116795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosome assembly and centriole elongation protein","termid":"PBO:0116795"}


id: PBO:0062841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 7","termid":"PBO:0062841"}


id: GO:0046107
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of uracil, 2,4-dioxopyrimidine, one of the pyrimidine bases occurring in RNA, but not in DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"uracil metabolic process","termid":"GO:0019860"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"uracil biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil anabolism","type":"exact"},{"name":"uracil biosynthesis","type":"exact"},{"name":"uracil formation","type":"exact"},{"name":"uracil synthesis","type":"exact"}],"termid":"GO:0046107","terms_by_termid":{"GO:0006223":null}}


id: PBO:0034350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_kinase_activity","termid":"PBO:0034350"}


id: PBO:0089312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan glucosidase Exg2","termid":"PBO:0089312"}


id: PBO:0109977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invertase, beta-fructofuranosidase Inv2","termid":"PBO:0109977"}


id: PBO:0043713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 1","termid":"PBO:0043713"}


id: MONDO:0013510
data:
  {"annotated_genes":["SJAG_00757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89101],"is_not":false,"summary":null,"term":"MONDO:0013510"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial melanoma","termid":"MONDO:0018961"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00757":null},"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613972","UMLS:C3151417","MEDGEN:462767"],"synonyms":[{"name":"CMM6","type":"related"},{"name":"melanoma, cutaneous malignant, 6","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 6","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, type 6","type":"exact"},{"name":"susceptibility to cutaneous malignant melanoma 6","type":"related"}],"termid":"MONDO:0013510","terms_by_termid":{"MONDO:0013510":null},"xrefs":{"Monarch":{"xref_id":"0013510"}}}


id: PBO:0045888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma","termid":"PBO:0045888"}


id: GO:0052188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a cellular component in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of cellular component in other organism involved in symbiotic interaction (obsolete GO:0052188)","synonyms":[{"name":"modification of cellular component in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052188"}


id: GO:1902626
data:
  {"annotated_genes":["SJAG_04108","SJAG_00949","SJAG_01454","SJAG_02508","SJAG_00882","SJAG_04940","SJAG_01420","SJAG_03080","SJAG_03012","SJAG_00689","SJAG_04669","SJAG_02830","SJAG_03458","SJAG_03466","SJAG_04004","SJAG_04395","SJAG_01606","SJAG_02759","SJAG_01839","SJAG_02952","SJAG_00722","SJAG_01811","SJAG_04492"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57323,57970,81274,91449,94227,94647,99850,101055,102289,102483,102623,104420,105407,107928,109370,110955,112765,114106,114869,117760,117761,118636,120911],"is_not":false,"summary":null,"term":"GO:1902626"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the large subunit precursor of the preribosome.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:22735702","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"ribosomal large subunit assembly","termid":"GO:0000027"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02508":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_04004":null,"SJAG_04108":null,"SJAG_04395":null,"SJAG_04492":null,"SJAG_04669":null,"SJAG_04940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"assembly of large subunit precursor of preribosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"66S preribosome assembly","type":"narrow"},{"name":"66S preribosome formation","type":"narrow"},{"name":"preribosome, large subunit precursor formation","type":"exact"}],"termid":"GO:1902626","terms_by_termid":{"GO:1902626":null}}


id: GO:0005749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain.","definition_xrefs":["GOC:vw","GOC:mtg_sensu","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (obsolete GO:0005749)","synonyms":[{"name":"mitochondrial fumarate reductase complex","type":"exact"}],"termid":"GO:0005749"}


id: GO:0102543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: epsilon-rhodomycinone + H2O = 15-demethoxy-epsilon-rhodomycinone + methanol + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete epsilon-rhodomycinone methylesterase activity (obsolete GO:0102543)","termid":"GO:0102543"}


id: MONDO:0000637
data:
  {"annotated_genes":["SJAG_03905","SJAG_03453","SJAG_01349","SJAG_01748","SJAG_05979","SJAG_01013","SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89173,89019,89021,89018,89174,89020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[87979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the musculoskeletal system","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_04287":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"musculoskeletal system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1714562","UMLS:C0036210","DOID:0060100","NCIT:C166357"],"synonyms":[{"name":"cancer of musculoskeletal system","type":"exact"},{"name":"malignant musculoskeletal system neoplasm","type":"exact"},{"name":"malignant neoplasm of musculoskeletal system","type":"exact"},{"name":"musculoskeletal system cancer","type":"exact"},{"name":"skeletal system cancer","type":"related"}],"termid":"MONDO:0000637","terms_by_termid":{"MONDO:0002629":null,"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0000637"}}}


id: PBO:0003608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase (predicted)","termid":"PBO:0003608"}


id: PBO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetate transmembrane transporter (predicted)","termid":"PBO:0001009"}


id: PBO:0065559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 like","termid":"PBO:0065559"}


id: GO:0019575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose, catalyzed by the enzyme beta-fructofuranosidase (EC:3.2.1.26).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using beta-fructofuranosidase (obsolete GO:0019575)","synonyms":[{"name":"sucrose breakdown, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolic process, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolism, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose degradation, using beta-fructofuranosidase","type":"exact"}],"termid":"GO:0019575"}


id: _global:results_in_commitment_to
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p 'results in commitment to' c if and only if p is a developmental process and c is a cell and p results in the state of c changing such that is can only develop into a single cell type.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_commitment_to","secondary_identifiers":["RO:0002348","GOREL:0001017"],"termid":"_global:results_in_commitment_to"}


id: PBO:0117130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1B antisense RNA 2","termid":"PBO:0117130"}


id: PBO:0004810
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.31","termid":"PBO:0004810"}


id: FYPO:0006077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 9 of histone H3 occurs to a greater extent than normal at ribosomal DNA.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at rDNA during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at rDNA during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at ribosomal DNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9 methylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at rDNA during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at rDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0006077"}


id: MONDO:0006701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm of the anterior pituitary gland in which the neoplastic cells do not stain with acidic or basic dyes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gland adenoma","termid":"MONDO:0006373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromophobe adenoma","secondary_identifiers":["NCIT:C2857","MEDGEN:1747","MESH:D000238","DOID:3828","EFO:1000867","ICDO:8270/0","UMLS:C0001432"],"synonyms":[{"name":"chromophobe adenoma of pituitary gland","type":"exact"},{"name":"chromophobe adenoma of the pituitary gland","type":"exact"},{"name":"pituitary chromophobe adenoma","type":"exact"},{"name":"pituitary gland chromophobe adenoma","type":"exact"}],"termid":"MONDO:0006701","xrefs":{"Monarch":{"xref_id":"0006701"}}}


id: PATO:0002267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edge shape","termid":"PATO:0002267"}


id: FYPO:0006831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis begins later than normal.","definition_xrefs":["PomBase:mah","GO:0031671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of primary cell septum biogenesis","synonyms":[{"name":"delayed onset of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"delayed onset of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"delayed onset of primary cell septum formation","type":"exact"},{"name":"delayed onset of primary septum biogenesis","type":"exact"},{"name":"delayed onset of primary septum synthesis","type":"related"},{"name":"delayed primary cell septum biogenesis","type":"exact"}],"termid":"FYPO:0006831"}


id: GO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving carbon catabolites that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0000429"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription","termid":"GO:0045991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"carbon catabolite activation of transcription from RNA polymerase II promoter","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000436"}


id: MONDO:0029136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"LAMA2-related muscular dystrophy","termid":"MONDO:0100228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, limb-girdle, autosomal recessive 23","secondary_identifiers":["UMLS:C4748327","Orphanet:565837","MEDGEN:1648462","GARD:22270","OMIM:618138"],"synonyms":[{"name":"LGMDR23","type":"related"},{"name":"laminin subunit alpha 2-related limb-girdle muscular dystrophy R23","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 23","type":"exact"}],"termid":"MONDO:0029136","xrefs":{"Monarch":{"xref_id":"0029136"}}}


id: PBO:0001607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase/lipase (predicted)","termid":"PBO:0001607"}


id: PBO:0074795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13","termid":"PBO:0074795"}


id: MONDO:1012597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in cattle due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, cattle","secondary_identifiers":["OMIA:000202-9913"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Bos taurus (taurine cattle)","type":"exact"}],"termid":"MONDO:1012597","xrefs":{"Monarch":{"xref_id":"1012597"}}}


id: GO:0072348
data:
  {"annotated_genes":["SJAG_01660","SJAG_00991","SJAG_05213","SJAG_03652","SJAG_03577","SJAG_04673","SJAG_02962","SJAG_04325","SJAG_04295","SJAG_01589","SJAG_00835","SJAG_03334","SJAG_02780","SJAG_01890","SJAG_01344","SJAG_03497","SJAG_03452","SJAG_00671","SJAG_02463","SJAG_01941","SJAG_02779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[73540,81014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[64602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[97386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[115102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[98924,97935,120204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[103256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[103257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[72231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[90080,104506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990543"},{"annotations":[90228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[105540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[95173],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[67065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[62427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"},{"annotations":[102567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[91969,91968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of compounds that contain sulfur, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_00835":null,"SJAG_00991":null,"SJAG_01344":null,"SJAG_01589":null,"SJAG_01660":null,"SJAG_01890":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_03652":null,"SJAG_04295":null,"SJAG_04325":null,"SJAG_04673":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sulfur compound transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"sulfur-containing compound transport","type":"exact"}],"termid":"GO:0072348","terms_by_termid":{"GO:0035348":null,"GO:0071934":null,"GO:0071996":null,"GO:0098709":null,"GO:0140125":null,"GO:0160007":null,"GO:1902358":null,"GO:1902434":null,"GO:1903712":null,"GO:1905135":null,"GO:1905626":null,"GO:1990543":null,"GO:1990545":null,"GO:1990553":null,"GO:1990554":null,"GO:1990557":null,"GO:1990559":null}}


id: MONDO:0004592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious bacterial cutaneous infection that affects children and is usually caused by Staphylococcus aureus. It usually presents in the face with honey colored scabs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma","termid":"MONDO:0002922"},{"relation_name":"is_a","term_name":"staphylococcus aureus infection","termid":"MONDO:0005545"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"streptococcal infection","termid":"MONDO:0021680"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"impetigo","secondary_identifiers":["ICD9:684","NCIT:C99088","UMLS:C0021099","icd11.foundation:971176543","DOID:8504","MESH:D007169","SCTID:48277006","MEDGEN:9440","ICD10CM:L01"],"termid":"MONDO:0004592","xrefs":{"Monarch":{"xref_id":"0004592"}}}


id: MONDO:0015062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the stomach.","definition_xrefs":["NCIT:C95871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system neuroendocrine tumor, grade 1/2","termid":"MONDO:0000386"},{"relation_name":"is_a","term_name":"gastric neuroendocrine neoplasm","termid":"MONDO:0003111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","secondary_identifiers":["MEDGEN:474032","ONCOTREE:SWDNET","UMLS:C3272399"],"synonyms":[{"name":"GNET","type":"exact"},{"name":"gastric NET","type":"exact"},{"name":"gastric NET G1/2","type":"exact"},{"name":"gastric neuroendocrine tumor","type":"exact"},{"name":"gastric neuroendocrine tumour","type":"exact"},{"name":"gastric well differentiated endocrine tumor","type":"exact"},{"name":"gastric well differentiated endocrine tumor/carcinoma","type":"exact"},{"name":"gastric well differentiated endocrine tumour","type":"exact"},{"name":"well-differentiated neuroendocrine tumors of the stomach","type":"related"},{"name":"well-differentiated neuroendocrine tumours of the stomach","type":"related"}],"termid":"MONDO:0015062","xrefs":{"Monarch":{"xref_id":"0015062"}}}


id: PBO:0031027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_pheromone_in_growth_medium","termid":"PBO:0031027"}


id: MONDO:0014228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fuchs' endothelial dystrophy in which the cause of the disease is a mutation in the AGBL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fuchs' endothelial dystrophy","termid":"MONDO:0005321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, Fuchs endothelial, 8","secondary_identifiers":["UMLS:C3809798","OMIM:615523","GARD:18223","MEDGEN:816128"],"synonyms":[{"name":"AGBL1 Fuchs' endothelial dystrophy","type":"exact"},{"name":"FECD8","type":"related"},{"name":"Fuchs' endothelial dystrophy caused by mutation in AGBL1","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, 8","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, type 8","type":"exact"}],"termid":"MONDO:0014228","xrefs":{"Monarch":{"xref_id":"0014228"}}}


id: GO:0061774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of sister chromatid cohesion by the topological unlinking of a cohesin ring to DNA.","definition_xrefs":["GOC:vw","PMID:26687354","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cohesin unloading (obsolete GO:0061774)","synonyms":[{"name":"DNA exit from the cohesin ring","type":"exact"}],"termid":"GO:0061774"}


id: FYPO:0004763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome does not occur during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during meiosis","termid":"FYPO:0004762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to kinetochore during meiosis I","synonyms":[{"name":"abolished protein localisation to kinetochore during meiosis I","type":"exact"},{"name":"abolished protein localization to kinetochore during first meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to meiotic kinetochore during meiosis I","type":"exact"},{"name":"protein localization to kinetochore during meiosis I abolished","type":"exact"}],"termid":"FYPO:0004763"}


id: PBO:0050722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 8","termid":"PBO:0050722"}


id: PBO:0017909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transmembrane transporter (predicted)","termid":"PBO:0017909"}


id: MONDO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fungal infections caused by trichosporon that may become systemic especially in an immunocompromised host. Clinical manifestations range from superficial cutaneous infections to systemic lesions in multiple organs.","definition_xrefs":["MESH:D060586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic systemic mycosis","termid":"MONDO:0045033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichosporonosis","secondary_identifiers":["SCTID:240761008","DOID:0050290","MEDGEN:452453","UMLS:C0343939"],"synonyms":[{"name":"Trichosporon caused disease or disorder","type":"exact"},{"name":"Trichosporon disease or disorder","type":"exact"},{"name":"Trichosporon infectious disease","type":"exact"}],"termid":"MONDO:0000306","xrefs":{"Monarch":{"xref_id":"0000306"}}}


id: PBO:0071531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 34","termid":"PBO:0071531"}


id: PBO:0004162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity-regulating kinase Kin1","termid":"PBO:0004162"}


id: MONDO:0004450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A occlusion precerebral artery that involves the carotid artery segment.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occlusion precerebral artery","termid":"MONDO:0003718"},{"relation_name":"is_a","term_name":"carotid artery disorder","termid":"MONDO:0005269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carotid artery occlusion","secondary_identifiers":["MEDGEN:539079","DOID:807","UMLS:C0265101","ICD9:433.10","SCTID:266254007"],"synonyms":[{"name":"carotid artery segment occlusion precerebral artery","type":"exact"},{"name":"occlusion and stenosis of carotid artery","type":"exact"},{"name":"occlusion precerebral artery of carotid artery segment","type":"exact"}],"termid":"MONDO:0004450","xrefs":{"Monarch":{"xref_id":"0004450"}}}


id: FYPO:0001023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cisplatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on cisplatin","synonyms":[{"name":"normal cell population growth in presence of cisplatin","type":"exact"},{"name":"normal cell population growth on cisplatin","type":"exact"},{"name":"normal cellular response to cisplatin","type":"related"},{"name":"normal growth on cis-DDP","type":"exact"},{"name":"normal vegetative cell population growth on cisplatin","type":"exact"}],"termid":"FYPO:0001023"}


id: FYPO:0007462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of filamentous actin measured the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. The total actin level (globular and filamentous actin) may be normal or abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased filamentous actin level","synonyms":[{"name":"increased F-actin level","type":"exact"},{"name":"increased accumulation of filamentous actin in cell","type":"related"},{"name":"increased cellular F-actin level","type":"exact"},{"name":"increased cellular filamentous actin level","type":"exact"},{"name":"increased filamentous actin level during mitotic cell cycle","type":"related"},{"name":"increased filamentous actin level during vegetative growth","type":"exact"}],"termid":"FYPO:0007462"}


id: PBO:0043018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHL1 antisense RNA 2","termid":"PBO:0043018"}


id: GO:0061631
data:
  {"annotated_genes":["SJAG_00208","SJAG_04573","SJAG_05340","SJAG_01679","SJAG_02918","SJAG_05022","SJAG_04612","SJAG_04857","SJAG_00293","SJAG_00931","SJAG_00855","SJAG_00300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66368,73055,75174,76113,79300,79784,89606,89824,89984,104161,116252,118773],"is_not":false,"summary":null,"term":"GO:0061631"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of ubiquitin from one protein to another via the reaction X-ubiquitin + Y = Y-ubiquitin + X, where both the X-ubiquitin and Y-ubiquitin linkages are thioester bonds between the C-terminal glycine of ubiquitin and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:BioGRID","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-protein transferase activity","termid":"GO:0004842"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00293":null,"SJAG_00300":null,"SJAG_00855":null,"SJAG_00931":null,"SJAG_01679":null,"SJAG_02918":null,"SJAG_04573":null,"SJAG_04612":null,"SJAG_04857":null,"SJAG_05022":null,"SJAG_05340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0003824","GO:0019787","GO:0003674","GO:0004842","GO:0016740"],"is_obsolete":false,"name":"ubiquitin conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.2.23"],"synonyms":[{"name":"E2","type":"broad"},{"name":"HECT E3","type":"related"}],"termid":"GO:0061631","terms_by_termid":{"GO:0061631":null}}


id: MONDO:0014580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the DPP6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant primary microcephaly","termid":"MONDO:0007988"},{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 33","secondary_identifiers":["UMLS:C4225375","GARD:16082","MEDGEN:899389","OMIM:616311","DOID:0070063"],"synonyms":[{"name":"DPP6 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD33","type":"exact"},{"name":"autosomal dominant intellectual disability 33","type":"exact"},{"name":"autosomal dominant mental retardation 33","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 33","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in DPP6","type":"exact"},{"name":"intellectual disability, autosomal dominant 33","type":"exact"},{"name":"intellectual disability, autosomal dominant type 33","type":"exact"},{"name":"mental retardation, autosomal dominant 33","type":"related"},{"name":"mental retardation, autosomal dominant type 33","type":"exact"}],"termid":"MONDO:0014580","xrefs":{"Monarch":{"xref_id":"0014580"}}}


id: GO:0034200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glycero-beta-D-manno-heptose 1,7-bisphosphate + H2O = D-glycero-beta-D-manno-heptose 1-phosphate + phosphate.","definition_xrefs":["PMID:11279237","RHEA:28518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase activity","secondary_identifiers":["MetaCyc:RXN0-4361","EC:3.1.3.82"],"synonyms":[{"name":"D,D-heptose 1,7-bisphosphate phosphatase activity","type":"exact"}],"termid":"GO:0034200"}


id: GO:0010322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of isopentenyl diphosphate produced via the methylerythritol (MEP) pathway (mevalonate-independent).","definition_xrefs":["PMID:16531478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","termid":"GO:0019288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","synonyms":[{"name":"regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"}],"termid":"GO:0010322"}


id: PBO:0086474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; identified by expression profiling and mass spectrometry","termid":"PBO:0086474"}


id: PR:O94519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spf30 gene.","definition_xrefs":["UniProtKB:O94519","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor spf30 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.02c","synonyms":[{"name":"Spom972h-spf30","type":"exact"},{"name":"survival of motor neuron-related-splicing factor 30 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94519"}


id: PBO:0075338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin related VPS10 domain containing receptor 3","termid":"PBO:0075338"}


id: MONDO:0009178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa dystrophica Neurotrophica","secondary_identifiers":["UMLS:C0268368","ICD9:757.39","MESH:C562637","OMIM:226500","MEDGEN:78666","SCTID:254176007"],"synonyms":[{"name":"epidermolysis bullosa dystrophica Neurotrophica","type":"exact"},{"name":"epidermolysis bullosa progressiva, recessive","type":"related"},{"name":"epidermolysis bullosa with congenital deafness","type":"related"}],"termid":"MONDO:0009178","xrefs":{"Monarch":{"xref_id":"0009178"}}}


id: MONDO:0014178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inclusion body myopathy with Paget disease of bone and frontotemporal dementia in which the cause of the disease is a mutation in the HNRNPA2B1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia","termid":"MONDO:0000507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 2","secondary_identifiers":["OMIM:615422","UMLS:C3809468","DOID:0111384","MEDGEN:815798","GARD:15962"],"synonyms":[{"name":"HNRNPA2B1 inclusion body myopathy with Paget disease of bone and frontotemporal dementia","type":"exact"},{"name":"IBMPFD2","type":"related"},{"name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia caused by mutation in HNRNPA2B1","type":"exact"},{"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 2","type":"exact"},{"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia type 2","type":"exact"},{"name":"multisystem Proteinopathy 2","type":"related"}],"termid":"MONDO:0014178","xrefs":{"Monarch":{"xref_id":"0014178"}}}


id: PBO:0062802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 1A","termid":"PBO:0062802"}


id: GO:0046932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate + Na+(out) => ATP + H2O + Na+(in), by a rotational mechanism.","definition_xrefs":["RHEA:58158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium-transporting ATP synthase activity, rotational mechanism","secondary_identifiers":["TC:3.A.2.1.2"],"synonyms":[{"name":"sodium-translocating F-type ATPase activity","type":"exact"},{"name":"sodium-transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:0046932"}


id: PBO:0052220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily V member 1","termid":"PBO:0052220"}


id: GO:0035964
data:
  {"annotated_genes":["SJAG_03268","SJAG_04391"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73002,119734],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"}]},"cv_name":"biological_process","definition":"The evagination of a Golgi membrane, resulting in formation of a COPI-coated vesicle.","definition_xrefs":["PMID:17041781","GOC:br","PMID:10052452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle budding from membrane","termid":"GO:0006900"},{"relation_name":"part_of","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03268":null,"SJAG_04391":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"COPI-coated vesicle budding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COPI vesicle budding","type":"exact"}],"termid":"GO:0035964","terms_by_termid":{"GO:0048205":null}}


id: PBO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase (predicted)","termid":"PBO:0000121"}


id: MONDO:0030847
data:
  {"annotated_genes":["SJAG_01665"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87512],"is_not":false,"summary":null,"term":"MONDO:0030847"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01665":null},"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, type 1C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1722257","DOID:0112190","OMIM:619110","UMLS:C5436834","GARD:16421"],"synonyms":[{"name":"DA1C","type":"exact"},{"name":"arthrogryposis, distal, type 1C","type":"exact"}],"termid":"MONDO:0030847","terms_by_termid":{"MONDO:0030847":null},"xrefs":{"Monarch":{"xref_id":"0030847"}}}


id: PBO:0016925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu32","termid":"PBO:0016925"}


id: GO:0061834
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of an actin filament where the structure forks.","definition_xrefs":["PMID:18256280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin filament","termid":"GO:0005884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin filament branch point","synonyms":[{"name":"microfilament branch point","type":"exact"}],"termid":"GO:0061834"}


id: GO:0048835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that reduces the number of petals produced in a developing flower.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete specification of decreased petal number (obsolete GO:0048835)","termid":"GO:0048835"}


id: PBO:0110289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex RNA-binding protein Rna15","termid":"PBO:0110289"}


id: GO:1903015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of exo-alpha-sialidase activity.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:23544079","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of exo-alpha-sialidase activity (obsolete GO:1903015)","synonyms":[{"name":"regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"regulation of acetylneuraminidase activity","type":"exact"},{"name":"regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"regulation of alpha-neuraminidase activity","type":"exact"},{"name":"regulation of neuraminidase activity","type":"exact"},{"name":"regulation of sialidase activity","type":"exact"}],"termid":"GO:1903015"}


id: PBO:0003299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor Mfm3","termid":"PBO:0003299"}


id: PBO:0084150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity methionine permease; integral membrane protein with 13 putative membrane-spanning regions; involved in both methionine and cysteine uptake; subject to transport-activity dependent, methionine-induced endocytosis, vacuolar delivery and degradation; starvation-induced endocytosis is transport-activity independent","termid":"PBO:0084150"}


id: GO:1900966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methanophenazine metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of methanophenazine metabolic process","termid":"GO:1900965"},{"relation_name":"negatively_regulates","term_name":"methanophenazine metabolic process","termid":"GO:1900629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of methanophenazine metabolic process","synonyms":[{"name":"down regulation of methanophenazine metabolic process","type":"exact"},{"name":"down regulation of methanophenazine metabolism","type":"exact"},{"name":"down-regulation of methanophenazine metabolic process","type":"exact"},{"name":"down-regulation of methanophenazine metabolism","type":"exact"},{"name":"downregulation of methanophenazine metabolic process","type":"exact"},{"name":"downregulation of methanophenazine metabolism","type":"exact"},{"name":"inhibition of methanophenazine metabolic process","type":"narrow"},{"name":"inhibition of methanophenazine metabolism","type":"exact"},{"name":"negative regulation of methanophenazine metabolism","type":"exact"}],"termid":"GO:1900966"}


id: FYPO:0005647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the kinetochore is divided into two or more parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal kinetochore morphology","termid":"FYPO:0005646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"split kinetochore","termid":"FYPO:0005647"}


id: PBO:0040821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 1","termid":"PBO:0040821"}


id: GO:0031499
data:
  {"annotated_genes":["SJAG_01176","SJAG_16455","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72007,78080,80837],"is_not":false,"summary":null,"term":"GO:0031499"}]},"cv_name":"cellular_component","definition":"A multiprotein complex having distributive polyadenylation activity of a variety of RNA substrates including hypomodified and incorrectly folded tRNAs, pre-snRNAs, pre-snoRNAs, incorrectly spliced or processed pre-mRNAs, cryptic unstable transcripts (CUTs), pre-rRNAs and rRNA fragments released as part of rRNA processing. In S. cerevisiae, the complex consists of either Pap2 (also known as Trf4) or Trf5, Air1 or Air2, and Mtr4, and is involved in RNA 3'-end processing and in RNA surveillance and quality control.","definition_xrefs":["PMID:16373491","PMID:16431988","PMID:16973437","PMID:17410208","PMID:17652137","PMID:15935758","PMID:15173578","PMID:16374505","PMID:15935759","PMID:15828860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_03984":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TRAMP complex","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Wikipedia:TRAMP_complex"],"synonyms":[{"name":"TRAMP4 complex","type":"narrow"},{"name":"TRAMP5 complex","type":"narrow"},{"name":"Trf4 complex","type":"narrow"},{"name":"Trf4 poly(A) polymerase complex","type":"narrow"},{"name":"Trf4p-Air2p-Mtr4p polyadenylation complex","type":"narrow"}],"termid":"GO:0031499","terms_by_termid":{"GO:0031499":null}}


id: _global:directly_positively_regulates_activity_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"The entity A, immediately upstream of the entity B, has an activity that positively regulates an activity performed by B. \\nFor example, A and B may be gene products and binding of B by A positively regulates the kinase activity of B.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulates_activity_of","termid":"_global:directly_regulates_activity_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulates_activity_of","secondary_identifiers":["RO:0002450"],"synonyms":[{"name":"molecularly increases activity of","type":"exact"}],"termid":"_global:directly_positively_regulates_activity_of"}


id: PBO:0056749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 5, N6-adenosine","termid":"PBO:0056749"}


id: PBO:0041168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG3 antisense RNA 1","termid":"PBO:0041168"}


id: PBO:0052802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 42, pseudogene","termid":"PBO:0052802"}


id: GO:1903296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate secretion, where glutamate acts as a neurotransmitter.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16782817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"positive regulation of glutamate secretion","termid":"GO:0014049"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, glutamatergic","termid":"GO:0051968"},{"relation_name":"is_a","term_name":"regulation of glutamate secretion, neurotransmission","termid":"GO:1903294"},{"relation_name":"positively_regulates","term_name":"glutamate secretion, neurotransmission","termid":"GO:0061535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of glutamate secretion, neurotransmission","synonyms":[{"name":"activation of glutamate secretion, neurotransmission","type":"narrow"},{"name":"up regulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"up-regulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"upregulation of glutamate secretion, neurotransmission","type":"exact"}],"termid":"GO:1903296"}


id: PBO:0063803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase regulatory subunit alpha 2","termid":"PBO:0063803"}


id: PBO:0004277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase(predicted)","termid":"PBO:0004277"}


id: MONDO:0958175
data:
  {"annotated_genes":["SJAG_00539","SJAG_00322"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87541,87542],"is_not":false,"summary":null,"term":"MONDO:0958175"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial microsomia","termid":"MONDO:0015397"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00322":null,"SJAG_00539":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniofacial microsomia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:501171","OMIM:164210","UMLS:C3495417"],"termid":"MONDO:0958175","terms_by_termid":{"MONDO:0958175":null},"xrefs":{"Monarch":{"xref_id":"0958175"}}}


id: MONDO:0012928
data:
  {"annotated_genes":["SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88573],"is_not":false,"summary":null,"term":"MONDO:0012928"}]},"cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 42 is a pure form of hereditary spastic paraplegia characterized by slowly progressive spastic paraplegia of lower extremities with an age of onset ranging from childhood to adulthood and patients presenting with spastic gait, increased tendon reflexes in lower limbs, extensor plantar response, weakness and atrophy of lower limb muscles and, in rare cases, pes cavus. No abnormalities are noted on magnetic resonance imaging.","definition_xrefs":["Orphanet:171863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 42","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567262","SCTID:763070001","OMIM:612539","GARD:17073","UMLS:C2675528","MEDGEN:393407","DOID:0110794"],"synonyms":[{"name":"SLC33A1 autosomal dominant pure spastic paraplegia","type":"exact"},{"name":"SPG42","type":"exact"},{"name":"autosomal dominant pure spastic paraplegia caused by mutation in SLC33A1","type":"exact"},{"name":"autosomal dominant spastic paraplegia 42","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 42","type":"exact"},{"name":"hereditary spastic paraplegia type 42","type":"exact"},{"name":"spastic paraplegia 42, autosomal dominant","type":"related"}],"termid":"MONDO:0012928","terms_by_termid":{"MONDO:0012928":null},"xrefs":{"Monarch":{"xref_id":"0012928"}}}


id: FYPO:0000700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"},{"relation_name":"is_a","term_name":"increased DNA N-glycosylase activity","termid":"FYPO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000700"}


id: GO:0102874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-16:0-2-18:2-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-16:0-2-18:3-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:17064923"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-16:0-2-18:2-digalactosyldiacylglycerol desaturase activity (obsolete GO:0102874)","termid":"GO:0102874"}


id: PBO:0027175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_septated_vegetative_cell","termid":"PBO:0027175"}


id: GO:0048592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the eye are generated and organized.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"eye development","termid":"GO:0001654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye morphogenesis","secondary_identifiers":["GO:0048748"],"termid":"GO:0048592"}


id: PBO:0072538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 68","termid":"PBO:0072538"}


id: GO:1901271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipooligosaccharide.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide biosynthetic process","synonyms":[{"name":"lipooligosaccharide anabolism","type":"exact"},{"name":"lipooligosaccharide biosynthesis","type":"exact"},{"name":"lipooligosaccharide formation","type":"exact"},{"name":"lipooligosaccharide synthesis","type":"exact"}],"termid":"GO:1901271"}


id: MONDO:0033309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 32","secondary_identifiers":["MEDGEN:1626697","UMLS:C4540342","DOID:0080278","OMIM:617757"],"synonyms":[{"name":"JBTS32","type":"related"},{"name":"Joubert syndrome 32","type":"exact"}],"termid":"MONDO:0033309","xrefs":{"Monarch":{"xref_id":"0033309"}}}


id: MONDO:0100538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"dysplasminogenemia","secondary_identifiers":["UMLS:C4225445","MEDGEN:904685"],"termid":"MONDO:0100538","xrefs":{"Monarch":{"xref_id":"0100538"}}}


id: MONDO:0019671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radial hemimelia is a congenital longitudinal deficiency of the radius bone of the forearm characterized by partial or total absence of the radius.","definition_xrefs":["Orphanet:93321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemimelia","termid":"MONDO:0016240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"radial hemimelia","secondary_identifiers":["UMLS:C0265581","GARD:225","ICD9:755.59","SCTID:48008009","icd11.foundation:653269137","MEDGEN:539344"],"synonyms":[{"name":"congenital longitudinal deficiency of the radius","type":"exact"},{"name":"radial clubhand","type":"exact"},{"name":"radial longitidinal meromelia","type":"exact"},{"name":"radial ray agenesis","type":"exact"}],"termid":"MONDO:0019671","xrefs":{"Monarch":{"xref_id":"0019671"}}}


id: GO:1901464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole metabolic process","termid":"GO:1901402"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"down regulation of tetrapyrrole anabolism","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"down regulation of tetrapyrrole formation","type":"exact"},{"name":"down regulation of tetrapyrrole synthesis","type":"exact"},{"name":"down-regulation of tetrapyrrole anabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"down-regulation of tetrapyrrole formation","type":"exact"},{"name":"down-regulation of tetrapyrrole synthesis","type":"exact"},{"name":"downregulation of tetrapyrrole anabolism","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"downregulation of tetrapyrrole formation","type":"exact"},{"name":"downregulation of tetrapyrrole synthesis","type":"exact"},{"name":"inhibition of tetrapyrrole anabolism","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthesis","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthetic process","type":"narrow"},{"name":"inhibition of tetrapyrrole formation","type":"exact"},{"name":"inhibition of tetrapyrrole synthesis","type":"exact"},{"name":"negative regulation of tetrapyrrole anabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"negative regulation of tetrapyrrole formation","type":"exact"},{"name":"negative regulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901464"}


id: PBO:0051872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily containing leucine rich repeat 2","termid":"PBO:0051872"}


id: GO:0070384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the Harderian gland over time, from its formation to the mature structure. The Harderian gland is an anterior orbital structure usually associated with the nictitating membrane, and produces and secretes a variety of substances to the eye, depending upon the species.","definition_xrefs":["GOC:hjd","PMID:7559104","PMID:16856596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Harderian gland development","termid":"GO:0070384"}


id: GO:0030346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein phosphatase 2B.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein phosphatase 2B binding","synonyms":[{"name":"calcineurin binding","type":"exact"},{"name":"protein phosphatase 3 binding","type":"related"}],"termid":"GO:0030346"}


id: MONDO:0008243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurodegenerative disorder leading to dementia. It is characterized by frontotemporal lobar degeneration with accumulation of tau proteins which form Pick bodies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontotemporal dementia","termid":"MONDO:0017276"},{"relation_name":"is_a","term_name":"cerebral degeneration","termid":"MONDO:0024238"},{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"Pick disease","secondary_identifiers":["ICD9:331.11","MESH:D020774","OMIM:172700","SCTID:13092008","ICD10CM:G31.01","MEDGEN:116020","DOID:11870","EFO:0003096","NCIT:C85008","UMLS:C0236642"],"synonyms":[{"name":"PICK disease of brain","type":"exact"},{"name":"Pick disease","type":"exact"},{"name":"Pick disease of the brain","type":"related"},{"name":"Pick's disease","type":"related"},{"name":"dementia in Pick's disease","type":"exact"},{"name":"dementia with lobar atrophy and neuronal cytoplasmic inclusions","type":"related"},{"name":"lobar atrophy of brain","type":"exact"},{"name":"lobar atrophy of the brain","type":"related"}],"termid":"MONDO:0008243","xrefs":{"Monarch":{"xref_id":"0008243"}}}


id: GO:0030092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the formation of a flagellum.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of flagellum assembly (obsolete GO:0030092)","synonyms":[{"name":"regulation of flagella assembly","type":"related"},{"name":"regulation of flagella biogenesis","type":"related"},{"name":"regulation of flagellum assembly","type":"exact"},{"name":"regulation of flagellum biogenesis","type":"related"}],"termid":"GO:0030092"}


id: PBO:0086595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression induced during heat stress; YNL019C has a paralog, YNL033W, that arose from a segmental duplication","termid":"PBO:0086595"}


id: PBO:0114138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase Dea3","termid":"PBO:0114138"}


id: MONDO:0021453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the retina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina neoplasm","termid":"MONDO:0021231"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of retina","secondary_identifiers":["NCIT:C3624","SCTID:92321003","ICD9:224.5","UMLS:C0154027","MEDGEN:57580","icd11.foundation:1433648317"],"synonyms":[{"name":"benign neoplasm of the retina","type":"exact"},{"name":"benign retina neoplasm","type":"exact"},{"name":"benign retina tumor","type":"exact"},{"name":"benign retina tumour","type":"exact"},{"name":"benign retinal neoplasm","type":"exact"},{"name":"benign retinal tumor","type":"exact"},{"name":"benign retinal tumour","type":"exact"},{"name":"benign tumor of retina","type":"exact"},{"name":"benign tumor of the retina","type":"exact"},{"name":"benign tumour of retina","type":"exact"},{"name":"benign tumour of the retina","type":"exact"},{"name":"retina benign neoplasm","type":"exact"}],"termid":"MONDO:0021453","xrefs":{"Monarch":{"xref_id":"0021453"}}}


id: GO:0030695
data:
  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id: MONDO:0015617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary gastro-esophageal disease (obsolete MONDO:0015617)","secondary_identifiers":["Orphanet:165658"],"synonyms":[{"name":"genetic gastro-esophageal disease","type":"exact"}],"termid":"MONDO:0015617","xrefs":{"Monarch":{"xref_id":"0015617"}}}


id: MONDO:0013527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lissencephaly in which the cause of the disease is a mutation in the NDE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microlissencephaly","termid":"MONDO:0015204"},{"relation_name":"is_a","term_name":"microcephaly with lissencephaly and/or hydranencephaly","termid":"MONDO:0700116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 4","secondary_identifiers":["OMIM:614019","DOID:0112235","MEDGEN:462811","UMLS:C3151461"],"synonyms":[{"name":"LIS4","type":"related"},{"name":"NDE1 lissencephaly (disease)","type":"exact"},{"name":"lissencephaly (disease) caused by mutation in NDE1","type":"exact"},{"name":"lissencephaly 4","type":"exact"},{"name":"lissencephaly 4 (with microcephaly)","type":"exact"},{"name":"lissencephaly 4 with microcephaly","type":"related"},{"name":"lissencephaly 4, with microcephaly","type":"related"},{"name":"lissencephaly type 4","type":"exact"}],"termid":"MONDO:0013527","xrefs":{"Monarch":{"xref_id":"0013527"}}}


id: MONDO:0004644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute monocytic leukemia","termid":"MONDO:0007896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"subacute monocytic leukemia","secondary_identifiers":["ICD9:206.20","MEDGEN:508955","ICD9:206.2","DOID:8696","SCTID:188746008","UMLS:C0152275"],"termid":"MONDO:0004644","xrefs":{"Monarch":{"xref_id":"0004644"}}}


id: RO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c involved in regulation of p if c enables  'p' and p' causally upstream of p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of_or_within","termid":"RO:0002264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of","termid":"RO:0002263"}


id: PBO:0077984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 6-1","termid":"PBO:0077984"}


id: PBO:0042507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 1","termid":"PBO:0042507"}


id: MONDO:0019721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A renal or urinary tract malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital anomaly of kidney and urinary tract","termid":"MONDO:0019719"}],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic renal or urinary tract malformation (obsolete MONDO:0019721)","secondary_identifiers":["Orphanet:93547"],"synonyms":[{"name":"syndrome associated with congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"syndromic congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"syndromic renal or urinary tract malformation","type":"exact"}],"termid":"MONDO:0019721","xrefs":{"Monarch":{"xref_id":"0019721"}}}


id: GO:0032805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle receptor catabolic process","termid":"GO:0032803"},{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"positive regulation of receptor catabolic process","termid":"GO:2000646"},{"relation_name":"positively_regulates","term_name":"low-density lipoprotein particle receptor catabolic process","termid":"GO:0032802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein particle receptor catabolic process","synonyms":[{"name":"activation of low-density lipoprotein receptor catabolic process","type":"narrow"},{"name":"positive regulation of low-density lipoprotein receptor breakdown","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor catabolism","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor degradation","type":"exact"},{"name":"stimulation of low-density lipoprotein receptor catabolic process","type":"narrow"},{"name":"up regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor catabolic process","type":"exact"}],"termid":"GO:0032805"}


id: PBO:0060967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transcription factor, X-box binding like 1","termid":"PBO:0060967"}


id: PBO:0046780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA transcriptional coactivator and phosphatase 1","termid":"PBO:0046780"}


id: MONDO:0018701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital nemaline myopathy (obsolete MONDO:0018701)","secondary_identifiers":["Orphanet:457074"],"termid":"MONDO:0018701","xrefs":{"Monarch":{"xref_id":"0018701"}}}


id: GO:0051292
data:
  {"annotated_genes":["SJAG_01833"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109697],"is_not":false,"summary":null,"term":"GO:0051292"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nuclear pore complex.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear pore organization","termid":"GO:0006999"},{"relation_name":"is_a","term_name":"pore complex assembly","termid":"GO:0046931"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01833":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"nuclear pore complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NPC assembly","type":"exact"},{"name":"nuclear pore assembly","type":"exact"},{"name":"nuclear pore biogenesis","type":"exact"},{"name":"nuclear pore biosynthesis","type":"exact"},{"name":"nuclear pore complex biogenesis","type":"exact"},{"name":"nuclear pore complex biosynthesis","type":"exact"},{"name":"nuclear pore complex formation","type":"exact"},{"name":"nuclear pore formation","type":"exact"}],"termid":"GO:0051292","terms_by_termid":{"GO:0051292":null}}


id: PBO:0089281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas2","termid":"PBO:0089281"}


id: GO:0072221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric distal convoluted tubule over time, from its formation to the mature structure. The metanephric distal convoluted tubule is the first segment of the metanephric nephron lying just downstream from the loop of Henle, immediately after the macula densa. Among other functions, in humans it is responsible for the reabsorption of about 5% of filtered sodium via the thiazide-sensitive Na-Cl symporter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal convoluted tubule development","termid":"GO:0072025"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}


id: GO:0045931
data:
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id: PATO:0000119
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id: MONDO:0024905
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id: GO:1990018
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id: GO:0099080
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id: PR:O43050
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id: PBO:0044784
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id: GO:0048330
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id: GO:0097370
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id: PBO:0066320
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id: PBO:0084170
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id: PATO:0002441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape in which the bearer's surface is highly topographical with ridges, pits, rugosity or other surface structures.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornamentation","termid":"PATO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornamented","termid":"PATO:0002441"}


id: PBO:0003956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan-alpha-1,4-glucosidase","termid":"PBO:0003956"}


id: MONDO:0017822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"functioning pituitary gland adenoma","termid":"MONDO:0003429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed functioning pituitary adenoma","secondary_identifiers":["UMLS:C0346305","MEDGEN:577354","Orphanet:314759","GARD:21390","SCTID:254961003"],"synonyms":[{"name":"mixed secreting pituitary adenoma","type":"exact"}],"termid":"MONDO:0017822","xrefs":{"Monarch":{"xref_id":"0017822"}}}


id: MONDO:0022756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 1q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on thelong arm (q) of chromosome 1. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 1q deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0008669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 1","termid":"MONDO:0016866"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1q deletion","secondary_identifiers":["MEDGEN:1825942","Orphanet:262001","icd11.foundation:296620919","UMLS:C5679674","GARD:8669"],"synonyms":[{"name":"1q deletion","type":"related"},{"name":"1q monosomy","type":"related"},{"name":"deletion 1q","type":"related"},{"name":"monosomy 1q","type":"related"},{"name":"partial deletion of chromosome 1q","type":"exact"},{"name":"partial deletion of the long arm of chromosome 1","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 1","type":"exact"},{"name":"partial monosomy 1q","type":"related"},{"name":"partial monosomy of chromosome 1q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 1","type":"exact"}],"termid":"MONDO:0022756","xrefs":{"Monarch":{"xref_id":"0022756"}}}


id: PBO:0068710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 91, pseudogene","termid":"PBO:0068710"}


id: PBO:0065308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 27","termid":"PBO:0065308"}


id: MONDO:0001510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease of orbital part of eye adnexa","termid":"MONDO:0004751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral displacement of eye","secondary_identifiers":["DOID:12360","UMLS:C0155272","ICD9:376.36","SCTID:48747004","MEDGEN:509888"],"synonyms":[{"name":"lateral displacement of globe","type":"exact"}],"termid":"MONDO:0001510","xrefs":{"Monarch":{"xref_id":"0001510"}}}


id: MONDO:0020616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group, mn (obsolete MONDO:0020616)","secondary_identifiers":["OMIM:111300"],"synonyms":[{"name":"BLOOD GROUP, MN","type":"related"},{"name":"Blood Group, Mnss System","type":"related"},{"name":"MN","type":"related"},{"name":"Mn Blood Group","type":"related"},{"name":"Mns Blood Group Systed","type":"related"},{"name":"Mnss Blood Group System","type":"related"},{"name":"blood group, MNSs system","type":"exact"}],"termid":"MONDO:0020616","xrefs":{"Monarch":{"xref_id":"0020616"}}}


id: PBO:0046729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"envoplakin like","termid":"PBO:0046729"}


id: PBO:0038657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 7, tartrate resistant (putative)","termid":"PBO:0038657"}


id: PBO:0089128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein/dubious","termid":"PBO:0089128"}


id: PR:Q9UUH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A metallophosphoesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C630.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.12","secondary_identifiers":["UniProtKB:Q9UUH0"],"synonyms":[{"name":"Spom972h-MPPE1","type":"exact"}],"termid":"PR:Q9UUH0"}


id: PBO:0050215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 32","termid":"PBO:0050215"}


id: GO:0003203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the endocardial cushion is generated and organized. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme morphogenesis","termid":"GO:0072132"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"endocardial cushion development","termid":"GO:0003197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion morphogenesis","termid":"GO:0003203"}


id: FYPO:0004067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0071619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 2 residues during vegetative growth","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0004067"}


id: PBO:0060345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin X","termid":"PBO:0060345"}


id: MONDO:0003518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma that involves the mediastinum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"},{"relation_name":"is_a","term_name":"extragonadal non-dysgerminomatous germ cell tumor","termid":"MONDO:0020539"},{"relation_name":"is_a","term_name":"mediastinal germ cell tumor","termid":"MONDO:0021067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinum teratoma","secondary_identifiers":["MEDGEN:233175","UMLS:C1334682","NCIT:C6438","DOID:5568"],"synonyms":[{"name":"mediastinum teratoma","type":"exact"},{"name":"teratoma of mediastinum","type":"exact"}],"termid":"MONDO:0003518","xrefs":{"Monarch":{"xref_id":"0003518"}}}


id: GO:0102062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-cis-farnesyl diphosphate = (+)-alpha-santalene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.50","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-santalene synthase activity","secondary_identifiers":["RHEA:30463","MetaCyc:RXN-10567"],"termid":"GO:0102062"}


id: GO:0060633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dph","GOC:txnOH","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription initiation","termid":"GO:2000143"},{"relation_name":"negatively_regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription initiation by RNA polymerase II","synonyms":[{"name":"negative regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060633"}


id: PBO:0029444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_glutamine","termid":"PBO:0029444"}


id: MONDO:0010936
data:
  {"annotated_genes":["SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87141],"is_not":false,"summary":null,"term":"MONDO:0010936"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the CHMP2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"behavioral variant of frontotemporal dementia","termid":"MONDO:0017160"},{"relation_name":"is_a","term_name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","termid":"MONDO:0030923"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04489":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:600795","OMIM:614696","SCTID:702393003","UMLS:C1833296","DOID:0060208","GARD:15322","DOID:0111227","ICD9:331.19","MEDGEN:318833","MESH:C563708","MESH:C579991"],"synonyms":[{"name":"CHMP2B amyotrophic lateral sclerosis","type":"exact"},{"name":"CHMP2B-related amyotrophic lateral sclerosis","type":"exact"},{"name":"Dmt1","type":"related"},{"name":"FTD3","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in CHMP2B","type":"exact"},{"name":"amyotrophic lateral sclerosis, Chmp2B-related","type":"exact"},{"name":"dementia, familial nonspecific","type":"related"},{"name":"frontotemporal dementia, chromosome 3-linked","type":"exact"}],"termid":"MONDO:0010936","terms_by_termid":{"MONDO:0010936":null},"xrefs":{"Monarch":{"xref_id":"0010936"}}}


id: GO:0120507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the base-exchange of a guanine residue with queuine at the wobble position of the anticodon of tRNAs. The eukaryotic tRNA-guanine transglycosylase exists as a heterodimer of a catalytic subunit (QTRT1 in humans) and an accessory subunit (QTRT2 in humans), whereas the bacterial enzyme is homodimeric.","definition_xrefs":["PMID:20354154","PMID:38181786","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tRNA-guanine transglycosylase complex","synonyms":[{"name":"TGT","type":"exact"},{"name":"queuine tRNA-ribosyltransferase complex","type":"exact"}],"termid":"GO:0120507"}


id: GO:0045442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + deacetoxycephalosporin C + O2 = CO2 + deacetylcephalosporin C + succinate.","definition_xrefs":["RHEA:16805","EC:1.14.11.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"deacetoxycephalosporin-C hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.11.26-RXN","KEGG_REACTION:R05229"],"synonyms":[{"name":"3'-methylcephem hydroxylase activity","type":"related"},{"name":"DACS","type":"related"},{"name":"DAOC hydroxylase activity","type":"related"},{"name":"beta-lactam hydroxylase activity","type":"exact"},{"name":"deacetoxycephalosporin C hydroxylase activity","type":"related"},{"name":"deacetoxycephalosporin-C,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"deacetylcephalosporin C synthase activity","type":"related"}],"termid":"GO:0045442"}


id: GO:0060455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"regulation of gastric acid secretion","termid":"GO:0060453"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"negatively_regulates","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of gastric acid secretion","termid":"GO:0060455"}


id: PBO:0052760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 52","termid":"PBO:0052760"}


id: PATO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000866 suckling reflex value (obsolete PATO:0000866)","termid":"PATO:0000866"}


id: GO:0070078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from arginine at position 2 of the histone.","definition_xrefs":["GOC:BHF","GOC:vk"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R2 demethylation (obsolete GO:0070078)","termid":"GO:0070078"}


id: PBO:0048336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 47","termid":"PBO:0048336"}


id: GO:0090595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + L-lysine = CoA + H+ + N(6)-acetyl-L-lysine.","definition_xrefs":["RHEA:69476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid N-acetyltransferase activity","termid":"GO:0140085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"L-lysine N6-acetyltransferase","secondary_identifiers":["EC:2.3.1.306","MetaCyc:LYSACET-RXN"],"synonyms":[{"name":"acetyl-CoA:L-lysine N6-acetyltransferase","type":"exact"}],"termid":"GO:0090595"}


id: MONDO:0958034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"lipodystrophy, familial partial, type 9","secondary_identifiers":["OMIM:620683","UMLS:C5882746","MEDGEN:1845936"],"termid":"MONDO:0958034","xrefs":{"Monarch":{"xref_id":"0958034"}}}


id: PBO:0005514
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.19","termid":"PBO:0005514"}


id: GO:0140833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphotyrosine (position 1).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0003824","GO:0140096","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat Y1 kinase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain Y1 kinase activity","type":"exact"}],"termid":"GO:0140833"}


id: PBO:0043887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone","termid":"PBO:0043887"}


id: MONDO:0008926
data:
  {"annotated_genes":["SJAG_00995","SJAG_02031","SJAG_02828","SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008955"},{"annotations":[87499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012553"},{"annotations":[86829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014696"},{"annotations":[87500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012554"},{"annotations":[88402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010216"}]},"cv_name":"mondo","definition":"Cerebrooculofacioskeletal (COFS) syndrome is a rare genetic disorder, belonging to a family of diseases of DNA repair, characterized by a severe sensorineural involvement.","definition_xrefs":["Orphanet:1466"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Cockayne syndrome","termid":"MONDO:0016006"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_02031":null,"SJAG_02828":null,"SJAG_04114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0021190","MONDO:0005328"],"is_obsolete":false,"name":"COFS syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080910","GARD:6027","MEDGEN:1762238","NCIT:C3817","OMIMPS:214150","UMLS:C5399761"],"synonyms":[{"name":"COFS","type":"exact"},{"name":"Cerebro Oculo Facio Skeletal Syndrome","type":"exact"},{"name":"Pena-Shokeir syndrome type 2","type":"exact"},{"name":"cerebro-oculo-facio-skeletal syndrome","type":"exact"},{"name":"cerebrooculofacioskeletal syndrome","type":"exact"}],"termid":"MONDO:0008926","terms_by_termid":{"MONDO:0008955":null,"MONDO:0010216":null,"MONDO:0012553":null,"MONDO:0012554":null,"MONDO:0014696":null},"xrefs":{"Monarch":{"xref_id":"0008926"}}}


id: PBO:0046817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid amide hydrolase 2","termid":"PBO:0046817"}


id: MOD:00625
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylmaleimide derivatized residue","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:00625"}


id: MONDO:0016726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuronal tumor (obsolete MONDO:0016726)","secondary_identifiers":["Orphanet:251924"],"termid":"MONDO:0016726","xrefs":{"Monarch":{"xref_id":"0016726"}}}


id: GO:0046316
data:
  {"annotated_genes":["SJAG_00633"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81746],"is_not":false,"summary":null,"term":"GO:0046316"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + ATP = 6-phospho-D-gluconate + ADP + 2 H+.","definition_xrefs":["RHEA:19433","EC:2.7.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"gluconokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLUCONOKIN-RXN","KEGG_REACTION:R01737"],"synonyms":[{"name":"ATP:D-gluconate 6-phosphotransferase activity","type":"related"},{"name":"gluconate kinase activity","type":"related"},{"name":"gluconokinase (phosphorylating)","type":"related"}],"termid":"GO:0046316","terms_by_termid":{"GO:0046316":null}}


id: MOD:00056
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to N-acetyl-L-isoleucine.","definition_xrefs":["PubMed:8034631","RESID:AA0047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-isoleucine","synonyms":[{"name":"(2S,3S)-2-acetamido-3-methylpentanoic acid","type":"exact"},{"name":"2-acetylamino-3-methylpentanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-methylpentanoic acid","type":"exact"},{"name":"AcIle","type":"exact"},{"name":"N-acetyl-L-isoleucine","type":"exact"},{"name":"N-acetylated L-isoleucine","type":"exact"},{"name":"acetylisoleucine","type":"exact"}],"termid":"MOD:00056"}


id: PBO:0056794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFF pseudogene 3","termid":"PBO:0056794"}


id: RO:HOM0000072
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Biological homology that involves an ectopic structure and the normally positioned structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_biological_homology_relationship_with","termid":"RO:HOM0000008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homeosis_relationship_with","synonyms":[{"name":"heterotopy","type":"related"}],"termid":"RO:HOM0000072"}


id: MONDO:0011774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the MYO3A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 30","secondary_identifiers":["OMIM:607101","GARD:22603","UMLS:C1846784","MEDGEN:335521","DOID:0110489","MESH:C564624"],"synonyms":[{"name":"DFNB30","type":"narrow"},{"name":"MYO3A autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 30","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 30","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in MYO3A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 30","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 30","type":"exact"},{"name":"deafness, autosomal recessive 30","type":"narrow"},{"name":"deafness, autosomal recessive type 30","type":"narrow"}],"termid":"MONDO:0011774","xrefs":{"Monarch":{"xref_id":"0011774"}}}


id: MONDO:1011342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Otorhinolaryngologic disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342","xrefs":{"Monarch":{"xref_id":"1011342"}}}


id: FYPO:0004893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is normal (i.e. indistinguishable from wild type) during the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:11069657","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0002157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal 1,3-beta-D-glucan synthase activity during vegetative growth","synonyms":[{"name":"normal 1,3-beta-D-glucan synthase activity during vegetative growth during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004893"}


id: FYPO:0006246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to nucleus during cellular response to osmotic stress","synonyms":[{"name":"increased protein localisation to nucleus during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleus during osmotic stress","type":"exact"}],"termid":"FYPO:0006246"}


id: PBO:0085226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p; associates with actin patches on cell cortex; promotes protein-protein interactions essential for endocytosis; binds to and activates Arp2/3 complex in vitro; phosphorylation of Thr-1225 is regulated by MAPK Hog1p in response to osmotic stress; previously thought to be a subunit of poly(A) ribonuclease","termid":"PBO:0085226"}


id: MONDO:0018083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign disorder of tyrosine metabolism detected upon newborn screening and often observed in premature infants. It shows no clinical symptoms. It is characterized by tyrosinemia, moderate hyperphenylalaninemia, and tyrosiluria that usually resolve after 2 months of age.","definition_xrefs":["Orphanet:3402"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"},{"relation_name":"is_a","term_name":"tyrosinemia","termid":"MONDO:0004741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"transient tyrosinemia of the newborn","secondary_identifiers":["UMLS:C0268485","GARD:5388","MEDGEN:541331"],"synonyms":[{"name":"transient neonatal tyrosinemia","type":"exact"},{"name":"transient tyrosinemia of the neonate","type":"exact"},{"name":"tyrosine-oxidase temporary deficiency","type":"related"}],"termid":"MONDO:0018083","xrefs":{"Monarch":{"xref_id":"0018083"}}}


id: GO:0006232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of TDP, ribosylthymine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate biosynthetic process","termid":"GO:0009194"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"TDP metabolic process","termid":"GO:0046043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"TDP biosynthetic process","synonyms":[{"name":"TDP anabolism","type":"exact"},{"name":"TDP biosynthesis","type":"exact"},{"name":"TDP formation","type":"exact"},{"name":"TDP synthesis","type":"exact"}],"termid":"GO:0006232"}


id: FYPO:0003356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to papuamide B during mating. Cells stop growing (and may die) at a concentration of papuamide B that allows wild type cells to grow.","definition_xrefs":["PMID:24514900","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to papuamide B during mating","synonyms":[{"name":"sensitive to papuamide B during conjugation with cellular fusion","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids during mating","type":"broad"}],"termid":"FYPO:0003356"}


id: PBO:0058727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6855","termid":"PBO:0058727"}


id: MONDO:0019239
data:
  {"annotated_genes":["SJAG_03861","SJAG_02901","SJAG_04449","SJAG_02791","SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958179"},{"annotations":[88214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958192"},{"annotations":[87296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[88691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"},{"annotations":[88733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011152"},{"annotations":[88336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012596"},{"annotations":[87756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013531"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of serine family amino acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null,"SJAG_02901":null,"SJAG_03861":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of serine family metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681286","GARD:18968","MEDGEN:1842840","Orphanet:79194"],"synonyms":[{"name":"disorder of serine or glycine metabolism","type":"related"},{"name":"inborn disorder of serine or glycine metabolism","type":"exact"},{"name":"inborn error of serine family amino acid metabolic process","type":"exact"},{"name":"inborn serine family amino acid metabolic process disorder","type":"exact"},{"name":"rare inborn error of serine family amino acid metabolic process","type":"exact"}],"termid":"MONDO:0019239","terms_by_termid":{"MONDO:0009736":null,"MONDO:0011152":null,"MONDO:0012596":null,"MONDO:0013531":null,"MONDO:0014466":null,"MONDO:0958179":null,"MONDO:0958192":null},"xrefs":{"Monarch":{"xref_id":"0019239"}}}


id: GO:0005693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U12, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U12 snRNP, most of which remain associated with the U12 snRNA both while the U12 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:krc","ISBN:0879695897","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U12 snRNP","synonyms":[{"name":"snRNP U12","type":"exact"}],"termid":"GO:0005693"}


id: PBO:0040725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated transcription factor 1","termid":"PBO:0040725"}


id: PBO:0067553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 704, pseudogene","termid":"PBO:0067553"}


id: PBO:0071539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 4","termid":"PBO:0071539"}


id: FYPO:0005999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any transfer RNA (tRNA) primary transcript, tRNA precursor or processing intermediate, or mature tRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"altered tRNA or precursor level","synonyms":[{"name":"abnormal tRNA or precursor level","type":"exact"},{"name":"altered tRNA or precursor accumulation","type":"related"},{"name":"altered tRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered tRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered tRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005999"}


id: PBO:0063808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1","termid":"PBO:0063808"}


id: MONDO:0000447
data:
  {"annotated_genes":["SJAG_03535","SJAG_01950","SJAG_00175"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008265"},{"annotations":[87880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014860"},{"annotations":[86921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054743"}]},"cv_name":"mondo","definition":"An autosomal dominant inherited condition characterized by many cysts of various sizes scattered throughout the liver.","definition_xrefs":["GARD:0009457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_01950":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant polycystic liver disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10048834","MEDGEN:56388","OMIMPS:174050","MedDRA:10010427","DOID:0050770","SCTID:72925005","MedDRA:10083939","HP:0006557","Orphanet:2924","UMLS:C0158683","ICD9:751.62","icd11.foundation:1361740083","GARD:9457","NCIT:C82833","ICD10CM:Q44.6","icd11.foundation:423904268"],"synonyms":[{"name":"AD polycystic liver disease","type":"exact"},{"name":"ADPLD","type":"exact"},{"name":"PCLD","type":"exact"},{"name":"congenital cystic liver disease","type":"related"},{"name":"congenital hepatic cyst","type":"related"},{"name":"fibrocystic liver disease","type":"related"},{"name":"isolated congenital polycystic liver disease","type":"exact"},{"name":"isolated polycystic liver disease","type":"exact"},{"name":"polycystic liver disease","type":"exact"}],"termid":"MONDO:0000447","terms_by_termid":{"MONDO:0008265":null,"MONDO:0014860":null,"MONDO:0054743":null},"xrefs":{"Monarch":{"xref_id":"0000447"}}}


id: GO:0039665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Induction of organellar membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with a viral capsid. Results in release of the virus contents from an organelle into the host cell cytoplasm.","definition_xrefs":["GOC:jl","VZ:985","UniProtKB-KW:KW-1173","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"symbiont entry into host cell via permeabilization of host membrane","termid":"GO:0140267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"permeabilization of host organelle membrane involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via permeabilization of host organelle membrane","type":"related"},{"name":"viral membrane-penetration protein","type":"related"},{"name":"viral penetration via host endosomal membrane disruption by virus","type":"exact"},{"name":"viral penetration via perforation of host organellar membrane by virus","type":"exact"},{"name":"viral penetration via permeabilization of host organellar membrane","type":"exact"}],"termid":"GO:0039665"}


id: PBO:0048705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine receptor alpha 2","termid":"PBO:0048705"}


id: GO:0021677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 8. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dgh","GOC:curators","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 8 morphogenesis","termid":"GO:0021674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 8 formation","termid":"GO:0021677"}


id: GO:0034616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a laminar fluid shear stress stimulus. Laminar fluid flow is the force acting on an object in a system where the fluid is moving across a solid surface in parallel layers. As an example, laminar shear stress can be seen where blood flows against the luminal side of blood vessel walls.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fluid shear stress","termid":"GO:0034405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to laminar fluid shear stress","termid":"GO:0034616"}


id: PBO:0077234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMCC1 divergent transcript","termid":"PBO:0077234"}


id: PATO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"quality","termid":"PATO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative","termid":"PATO:0000068"}


id: MONDO:0031071
data:
  {"annotated_genes":["SJAG_01621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87586],"is_not":false,"summary":null,"term":"MONDO:0031071"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 21","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824003","OMIM:620072","UMLS:C5774230"],"synonyms":[{"name":"DBA21","type":"exact"},{"name":"diamond-blackfan anaemia 21","type":"exact"},{"name":"diamond-blackfan anemia 21","type":"exact"}],"termid":"MONDO:0031071","terms_by_termid":{"MONDO:0031071":null},"xrefs":{"Monarch":{"xref_id":"0031071"}}}


id: PBO:0083633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3); subunit of the core complex of eIF3; part of a Prt1p-Rpg1p-Nip1p subcomplex that stimulates binding of mRNA and tRNA(i)Met to ribosomes; essential for loading mRNA onto ribosome at entry and exit channels of preinitiation complex; involved in translation reinitiation; eIF3 is also involved in programmed stop codon readthrough","termid":"PBO:0083633"}


id: MONDO:0005633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute disseminated encephalomyelitis (obsolete MONDO:0005633)","termid":"MONDO:0005633","xrefs":{"Monarch":{"xref_id":"0005633"}}}


id: MONDO:0043125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ptosis","termid":"MONDO:0000728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"mcpherson robertson cammarano syndrome","secondary_identifiers":["MESH:C538161","MEDGEN:419888","UMLS:C2931751"],"synonyms":[{"name":"dominantly inherited ptosis, strabismus and ectopic pupils","type":"related"}],"termid":"MONDO:0043125","xrefs":{"Monarch":{"xref_id":"0043125"}}}


id: PBO:0054741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2150","termid":"PBO:0054741"}


id: PBO:0065338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteinase 3","termid":"PBO:0065338"}


id: MONDO:1012340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic valvular disease, non-human animal","termid":"MONDO:1011647"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic valvular disease, dog","secondary_identifiers":["OMIA:001246-9615"],"termid":"MONDO:1012340","xrefs":{"Monarch":{"xref_id":"1012340"}}}


id: PATO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process to oxygen which is lower than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"aerobic (for occurrence)","termid":"PATO:0001459"},{"relation_name":"is_a","term_name":"decreased sensitivity of a process","termid":"PATO:0001552"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased sensitivity of a process to oxygen","synonyms":[{"name":"low sensitivity of occurrent to oxygen","type":"exact"}],"termid":"PATO:0001554"}


id: GO:0043143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which proteins and protein complexes involved in translation are transported to, or maintained in, a specific location.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051179","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation by machinery localization","synonyms":[{"name":"establishment and maintenance of translational machinery localization","type":"exact"},{"name":"establishment and maintenance of translational protein localization","type":"exact"},{"name":"regulation of translation by machinery localisation","type":"exact"},{"name":"translational machinery localization","type":"exact"},{"name":"translational protein localization","type":"exact"}],"termid":"GO:0043143"}


id: GO:0033450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GUC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"GUC codon-amino acid adaptor activity","synonyms":[{"name":"GTC codon-amino acid adaptor activity","type":"exact"},{"name":"valine tRNA","type":"related"}],"termid":"GO:0033450"}


id: PBO:0048971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 2, mitochondrial","termid":"PBO:0048971"}


id: PBO:0077035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 3","termid":"PBO:0077035"}


id: PBO:0076866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX13 family member D","termid":"PBO:0076866"}


id: PATO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's having 3 or more hues or degrees of saturations.","definition_xrefs":["merriam-webster.:merriam-webster."],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motley","termid":"PATO:0001534"}


id: PBO:0068676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 57, pseudogene","termid":"PBO:0068676"}


id: PBO:0046744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 3","termid":"PBO:0046744"}


id: GO:0015566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of acriflavin from one side of a membrane to the other. Acriflavin is a fluorescent dye used as a local antiseptic and also as a biological stain. It intercalates into nucleic acids thereby inhibiting bacterial and viral replication.","definition_xrefs":["PubChem_Compound:6842"],"gene_count":0,"genotype_count":0,"name":"obsolete acriflavine transmembrane transporter activity (obsolete GO:0015566)","synonyms":[{"name":"acriflavin resistant pump activity","type":"related"},{"name":"acriflavin transporter activity","type":"related"},{"name":"acriflavine transporter activity","type":"related"}],"termid":"GO:0015566"}


id: PBO:0065726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader-Willi region non-protein coding RNA 3","termid":"PBO:0065726"}


id: GO:0010691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.","definition_xrefs":["GOC:txnOH","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels","termid":"GO:0010691"}


id: PBO:0049741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit epsilon 1","termid":"PBO:0049741"}


id: GO:0005476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carnitine (mitochondrial) + O-acyl-L-carnitine (cytoplasm) = carnitine (cytoplasm) + O-acyl-L-carnitine (mitochondrial).","definition_xrefs":["PMID:9032458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine transmembrane transporter activity","termid":"GO:0015226"},{"relation_name":"is_a","term_name":"O-acyl-L-carnitine transmembrane transporter activity","termid":"GO:0015227"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"carnitine:O-acyl-L-carnitine antiporter activity","secondary_identifiers":["Reactome:R-HSA-200424"],"synonyms":[{"name":"carnitine/acyl carnitine carrier activity","type":"exact"},{"name":"carnitine:acyl carnitine carrier activity","type":"exact"},{"name":"fatty acyl carnitine carrier","type":"exact"}],"termid":"GO:0005476"}


id: GO:1901488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of transcription factor catabolism that results in positive regulation of the SREBP signaling pathway.","definition_xrefs":["GOC:vw","GOC:TermGenie","PMID:22833559"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process (obsolete GO:1901488)","synonyms":[{"name":"positive regulation of SREBP signaling pathway by inhibition of SREBP degradation","type":"narrow"},{"name":"positive regulation of SREBP signaling pathway by negative regulation of SREBP degradation","type":"narrow"},{"name":"positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolism","type":"exact"},{"name":"positive regulation of SREBP-mediated signaling pathway by negative regulation of transcription factor catabolic process","type":"exact"},{"name":"positive regulation of SREBP-mediated signalling pathway by negative regulation of transcription factor catabolic process","type":"exact"}],"termid":"GO:1901488"}


id: GO:0035465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway that is involved in the determination of the lateral plate mesoderm with respect to its left and right halves.","definition_xrefs":["GOC:dgh","PMID:15084459"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:0035465)","synonyms":[{"name":"regulation of TGF-beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of TGF-beta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of transforming growth factor beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of transforming growth factor beta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:0035465"}


id: GO:0045479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recruitment of vesicles to the fusome. The vesicles become the fusome tubule network and are necessary for the assembly of the fusome.","definition_xrefs":["PMID:9046244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"},{"relation_name":"part_of","term_name":"fusome organization","termid":"GO:0045478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"vesicle targeting to fusome","synonyms":[{"name":"vesicle-fusome targeting","type":"exact"}],"termid":"GO:0045479"}


id: MONDO:1010676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microtia that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtia, non-human animal","termid":"MONDO:1010091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia, pig","secondary_identifiers":["OMIA:001952-9823"],"termid":"MONDO:1010676","xrefs":{"Monarch":{"xref_id":"1010676"}}}


id: MONDO:0004689
data:
  {"annotated_genes":["SJAG_02117","SJAG_03371","SJAG_04978","SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011417"},{"annotations":[87409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859328"},{"annotations":[87268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010651"},{"annotations":[86828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"},{"annotations":[88946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010200"}]},"cv_name":"mondo","definition":"An inherited metabolic disorder that involves metabolic disturbances in the processing or distribution of dietary minerals.","definition_xrefs":["DOID:896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02117":null,"SJAG_02399":null,"SJAG_03371":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn metal metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:6325","MESH:D008664","UMLS:C0025534"],"synonyms":[{"name":"metal metabolism disorder","type":"broad"},{"name":"metal metabolism, inborn error","type":"related"}],"termid":"MONDO:0004689","terms_by_termid":{"MONDO:0010200":null,"MONDO:0010651":null,"MONDO:0011301":null,"MONDO:0011417":null,"MONDO:0859328":null},"xrefs":{"Monarch":{"xref_id":"0004689"}}}


id: SO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone that is invalid.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated","termid":"SO:0000790"},{"relation_name":"is_a","term_name":"cDNA_clone","termid":"SO:0000317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_cDNA_clone","synonyms":[{"name":"invalidated cDNA clone","type":"exact"}],"termid":"SO:0000809"}


id: MONDO:1011223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal detachment that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal detachment, non-human animal","termid":"MONDO:1010321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal detachment, horse","secondary_identifiers":["OMIA:000275-9796"],"termid":"MONDO:1011223","xrefs":{"Monarch":{"xref_id":"1011223"}}}


id: PBO:0050418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D pseudogene 2","termid":"PBO:0050418"}


id: MONDO:0005642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conjunctivitis due to hypersensitivity to various allergens.","definition_xrefs":["MESH:D003233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic conjunctivitis","termid":"MONDO:0002314"},{"relation_name":"is_a","term_name":"eye allergy","termid":"MONDO:0005551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005046"],"is_obsolete":false,"name":"atopic conjunctivitis","secondary_identifiers":["EFO:0007141","UMLS:C0009766","HP:0007879","NCIT:C34506","DOID:11204","SCTID:473460002","ICD9:372.14","MEDGEN:3590"],"synonyms":[{"name":"Atopic conjunctivitis","type":"exact"},{"name":"allergic conjunctivitis","type":"exact"},{"name":"allergic conjunctivitis (disease)","type":"exact"},{"name":"allergic form of conjunctivitis (disease)","type":"exact"}],"termid":"MONDO:0005642","xrefs":{"Monarch":{"xref_id":"0005642"}}}


id: MONDO:0013110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"disorder of folate metabolism and transport","termid":"MONDO:0017313"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"neurodegenerative syndrome due to cerebral folate transport deficiency","secondary_identifiers":["SCTID:711403001","ICD9:266.2","MEDGEN:442763","UMLS:C2751584","DOID:0050719","icd11.foundation:1158040363","Orphanet:217382","GARD:10594","MESH:C567791","OMIM:613068"],"synonyms":[{"name":"cerebral folate deficiency syndrome","type":"related"},{"name":"cerebral folate receptor alpha deficiency","type":"exact"},{"name":"cerebral folate transport deficiency","type":"related"},{"name":"neurodegeneration due to cerebral folate TRANSPORT deficiency","type":"related"},{"name":"neurodegenerative syndrome due to cerebral folate transport deficiency","type":"exact"}],"termid":"MONDO:0013110","xrefs":{"Monarch":{"xref_id":"0013110"}}}


id: PBO:0064753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 89","termid":"PBO:0064753"}


id: PBO:0059822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 2","termid":"PBO:0059822"}


id: PR:O13724
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein ZPR1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10876:SF0","PRO:DNx","OMA:SCHPO01538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zpr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.04c","secondary_identifiers":["UniProtKB:O13724"],"synonyms":[{"name":"Spom972h-ZNF259","type":"exact"}],"termid":"PR:O13724"}


id: GO:0043958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propanoyl-CoA + NAD+ = acryloyl-CoA + H+ + NADH.","definition_xrefs":["PMID:12603323","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acryloyl-CoA reductase (NADH) activity","secondary_identifiers":["MetaCyc:RXN-8568","EC:1.3.1.95","RHEA:34471"],"synonyms":[{"name":"acryloyl-CoA reductase activity","type":"broad"},{"name":"acryloyl-coenzyme A reductase activity","type":"broad"},{"name":"acrylyl-CoA reductase (NADH)","type":"exact"},{"name":"propionyl-CoA dehydrogenase","type":"broad"}],"termid":"GO:0043958"}


id: PR:P87157
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A target of Myb protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor-binding protein C25H2.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.16c","secondary_identifiers":["UniProtKB:P87157"],"synonyms":[{"name":"Spom972h-TOM1","type":"exact"}],"termid":"PR:P87157"}


id: PBO:0042726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein C pseudogene 1","termid":"PBO:0042726"}


id: GO:0072392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"phenol metabolic process","termid":"GO:0072390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol catabolic process","termid":"GO:0072392"}


id: _global:has_negative_regulatory_component_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"_global:has_regulatory_component_activity"},{"relation_name":"is_a","term_name":"negatively_regulated_by","termid":"_global:negatively_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_negative_regulatory_component_activity","secondary_identifiers":["RO:0002014"],"termid":"_global:has_negative_regulatory_component_activity"}


id: MONDO:0008741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PAGOD syndrome is a severe developmental syndrome characterized by multiple congenital anomalies including cardiovascular defects, pulmonary hypoplasia, diaphragmatic defects and genital anomalies.","definition_xrefs":["Orphanet:991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGOD syndrome","secondary_identifiers":["MESH:C537018","SCTID:722132007","GARD:3086","UMLS:C1859967","OMIM:202660","MEDGEN:347985"],"synonyms":[{"name":"Kennerknecht sorgo Oberhoffer syndrome","type":"related"},{"name":"PAGOD syndrome","type":"exact"},{"name":"agonadism with multiple internal malformations","type":"related"},{"name":"pulmonary hypoplasia, hypoplasia of the pulmonary artery, agonadism, omphalocele-diaphragmatic defect, and dextrocardia","type":"related"},{"name":"pulmonary hypoplasia-agonadism-dextrocardia-diaphragmatic hernia syndrome","type":"exact"}],"termid":"MONDO:0008741","xrefs":{"Monarch":{"xref_id":"0008741"}}}


id: PBO:0072602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase related","termid":"PBO:0072602"}


id: GO:0022897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a peptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by proton movement.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete proton-dependent peptide secondary active transmembrane transporter activity (obsolete GO:0022897)","synonyms":[{"name":"hydrogen/oligopeptide symporter","type":"related"}],"termid":"GO:0022897"}


id: PBO:0029084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_terbinafine","termid":"PBO:0029084"}


id: PBO:0049238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM7 antisense RNA 2","termid":"PBO:0049238"}


id: PBO:0085176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-methyltransferase; catalyzes two different O-methylation steps in ubiquinone (Coenzyme Q) biosynthesis; component of a mitochondrial ubiquinone-synthesizing complex; phosphoprotein","termid":"PBO:0085176"}


id: PBO:0083415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the essential ORF SEC61/YLR378C","termid":"PBO:0083415"}


id: PBO:0069411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 672, pseudogene","termid":"PBO:0069411"}


id: MONDO:0020184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare eyebrow/eyelashes anomaly (obsolete MONDO:0020184)","secondary_identifiers":["Orphanet:98594"],"termid":"MONDO:0020184","xrefs":{"Monarch":{"xref_id":"0020184"}}}


id: PBO:0060584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 21, pseudogene","termid":"PBO:0060584"}


id: PBO:0049416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2F, retinal","termid":"PBO:0049416"}


id: PBO:0080438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS54 subunit of GARP complex","termid":"PBO:0080438"}


id: SO:0001902
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region surrounding a cis_splice site, either within 1-3 bases of the exon or 3-8 bases of the intron.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"},{"relation_name":"part_of","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_region","synonyms":[{"name":"splice region","type":"related"}],"termid":"SO:0001902"}


id: PBO:0038377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_treated_by_substance","termid":"PBO:0038377"}


id: PBO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-11-1 (pseudogene)","termid":"PBO:0051251"}


id: PBO:0027667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing","termid":"PBO:0027667"}


id: PBO:0087541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RAVE complex (Rav1p, Rav2p, Skp1p); the RAVE complex promotes assembly of the V-ATPase holoenzyme; required for transport between the early and late endosome/PVC and for localization of TGN membrane proteins; potential Cdc28p substrate","termid":"PBO:0087541"}


id: GO:0019903
data:
  {"annotated_genes":["SJAG_04638"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64466],"is_not":false,"summary":null,"term":"GO:0019903"}]},"cv_name":"molecular_function","definition":"Binding to a protein phosphatase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase binding","termid":"GO:0019902"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"protein phosphatase binding","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0019903","terms_by_termid":{"GO:0019903":null}}


id: GO:1901844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication by electrical coupling involved in cardiac conduction.","definition_xrefs":["PMID:17130302","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"},{"relation_name":"regulates","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication by electrical coupling involved in cardiac conduction","termid":"GO:1901844"}


id: GO:1901167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-chlorocatechol.","definition_xrefs":["UniPathway:UPA00083","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"3-chlorocatechol metabolic process","synonyms":[{"name":"3-chlorocatechol metabolism","type":"exact"}],"termid":"GO:1901167"}


id: GO:1901692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of compound eye retinal cell apoptotic process.","definition_xrefs":["PMID:12021768","GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye retinal cell apoptotic process","termid":"GO:1901692"}


id: PBO:0017800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl metalloaminopeptidase Aap1","termid":"PBO:0017800"}


id: PBO:0039768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 3 (Gill blood group)","termid":"PBO:0039768"}


id: MONDO:1010082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Evans syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia, non-human animal","termid":"MONDO:1010069"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia, non-human animal","termid":"MONDO:1011406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evans syndrome, non-human animal","secondary_identifiers":["OMIA:001286"],"termid":"MONDO:1010082","xrefs":{"Monarch":{"xref_id":"1010082"}}}


id: PBO:0075789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 10","termid":"PBO:0075789"}


id: PBO:0049112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 174","termid":"PBO:0049112"}


id: SO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, of a nucleotide molecule, that interacts selectively and non-covalently with polypeptide residues of a nuclease.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease_binding_site","synonyms":[{"name":"nuclease binding site","type":"exact"}],"termid":"SO:0000059"}


id: MONDO:0002576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal rhabdomyosarcoma that arises from the extrahepatic bile ducts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct rhabdomyosarcoma","termid":"MONDO:0002577"},{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma","termid":"MONDO:0009993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"embryonal extrahepatic bile duct rhabdomyosarcoma","secondary_identifiers":["NCIT:C5847","MEDGEN:234244","DOID:3253","UMLS:C1333505"],"synonyms":[{"name":"embryonal extrahepatic bile duct rhabdomyosarcoma","type":"exact"},{"name":"embryonal rhabdomyosarcoma (disease) of extrahepatic bile duct","type":"exact"},{"name":"embryonal rhabdomyosarcoma of extrahepatic bile duct","type":"exact"},{"name":"embryonal rhabdomyosarcoma of the extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct embryonal rhabdomyosarcoma","type":"exact"},{"name":"extrahepatic bile duct embryonal rhabdomyosarcoma (disease)","type":"exact"}],"termid":"MONDO:0002576","xrefs":{"Monarch":{"xref_id":"0002576"}}}


id: GO:0043703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a photoreceptor cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate determination","termid":"GO:0048664"},{"relation_name":"part_of","term_name":"photoreceptor cell fate commitment","termid":"GO:0046552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell fate determination","termid":"GO:0043703"}


id: FYPO:0002542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a lower extent than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide (obsolete FYPO:0002542)","synonyms":[{"name":"decreased protein threonine phosphorylation at TP site during cellular response to hydrogen peroxide","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to H2O2","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation at threonine-proline site during cellular response to hydrogen peroxide","type":"exact"},{"name":"reduced protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002542"}


id: GO:0046110
data:
  {"annotated_genes":["SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xanthine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"xanthine metabolism","type":"exact"}],"termid":"GO:0046110","terms_by_termid":{"GO:0009115":null}}


id: GO:0140276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heterochromatin maintenance that is involved in chromatin silencing at or near a centromere.","definition_xrefs":["GOC:TermGenie","PMID:21289066","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete pericentric heterochromatin maintenance (obsolete GO:0140276)","synonyms":[{"name":"heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region","type":"related"},{"name":"heterochromatin maintenance involved in chromatin silencing at centromeric outer repeats","type":"exact"},{"name":"heterochromatin maintenance involved in chromatin silencing at pericentric region","type":"related"}],"termid":"GO:0140276"}


id: PBO:0042954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 8","termid":"PBO:0042954"}


id: PBO:0000563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase, poly(A)-specific ribonuclease complex subunit Pan2 (predicted)","termid":"PBO:0000563"}


id: PBO:0085436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly (A)+ RNA-binding protein; abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs; component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; implicated in regulation of translation; carries Q/N-rich domain at C- terminus, identified as candidate prion; ribosome-bound Pub1p modulates stop codon decoding during translation termination","termid":"PBO:0085436"}


id: MONDO:0011388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical cancer (obsolete MONDO:0011388)","synonyms":[{"name":"cervical cancer","type":"related"}],"termid":"MONDO:0011388","xrefs":{"Monarch":{"xref_id":"0011388"}}}


id: PBO:0072388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 14","termid":"PBO:0072388"}


id: GO:2000410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thymocyte migration","synonyms":[{"name":"regulation of immature T cell migration","type":"related"},{"name":"regulation of immature T lymphocyte migration","type":"related"},{"name":"regulation of immature T-cell migration","type":"related"},{"name":"regulation of immature T-lymphocyte migration","type":"related"},{"name":"regulation of thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000410"}


id: PBO:0047432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 3","termid":"PBO:0047432"}


id: PBO:0080994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 25","termid":"PBO:0080994"}


id: MONDO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atypical teratoid rhabdoid tumor (obsolete MONDO:0002215)","termid":"MONDO:0002215","xrefs":{"Monarch":{"xref_id":"0002215"}}}


id: GO:1990525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Baculovirus Inhibitor of apoptosis protein Repeat (BIR) domain.","definition_xrefs":["InterPro:IPR001370","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"BIR domain binding","synonyms":[{"name":"Baculovirus Inhibitor of apoptosis protein Repeat domain binding","type":"exact"}],"termid":"GO:1990525"}


id: PBO:0091821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane spermine family transmembrane transporter Caf5","termid":"PBO:0091821"}


id: PBO:0089172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein repair carboxyl methyl esterase","termid":"PBO:0089172"}


id: GO:1990434
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron-dense plaque at the lower end of a stereocilia tip link that provides the anchor in the stereocilia membrane at the tip of the stereocilium from which the tip link rises.","definition_xrefs":["PMID:19447093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia tip-link density","termid":"GO:1990427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lower tip-link density","synonyms":[{"name":"LTLD","type":"exact"}],"termid":"GO:1990434"}


id: PATO:0000722
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000722 relative yield value (obsolete PATO:0000722)","termid":"PATO:0000722"}


id: PBO:0049260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSC divergent transcript","termid":"PBO:0049260"}


id: PBO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-L, N-acetylglucosaminylphosphatidyl inositoldeacetylase (predicted)","termid":"PBO:0001690"}


id: PBO:0053602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 632","termid":"PBO:0053602"}


id: PBO:0072670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 3","termid":"PBO:0072670"}


id: PR:Q10111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18G6.12c gene.","definition_xrefs":["UniProtKB:Q10111","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18G6.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.12c","synonyms":[{"name":"Spom972h-SPAC18G6.12c","type":"exact"}],"termid":"PR:Q10111"}


id: MONDO:0006862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular pain in numerous body regions that can be reproduced by pressure on trigger points, localized hardenings in skeletal muscle tissue. Pain is referred to a location distant from the trigger points. A prime example is the temporomandibular joint dysfunction syndrome.","definition_xrefs":["MESH:D009209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myofascial pain syndrome","secondary_identifiers":["MEDGEN:6496","EFO:1001054","UMLS:C0027073","SCTID:24693007","DOID:431","MedDRA:10048780","ICD9:729.1"],"termid":"MONDO:0006862","xrefs":{"Monarch":{"xref_id":"0006862"}}}


id: GO:0160168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=9 symmetry. The T=9 capsid is composed of 12 pentameric and 80 hexameric capsomeres.","definition_xrefs":["PMID:37138077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=9 icosahedral viral capsid","secondary_identifiers":["VZ:5316"],"termid":"GO:0160168"}


id: PR:Q9P370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19B12.11c gene.","definition_xrefs":["UniProtKB:Q9P370","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein bud20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.11c","synonyms":[{"name":"Spom972h-SPAC19B12.11c","type":"exact"}],"termid":"PR:Q9P370"}


id: PBO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotically Upregulated Gene","termid":"PBO:0000310"}


id: PBO:0061923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily F member 12, pseudogene","termid":"PBO:0061923"}


id: GO:0072058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the outer stripe over time, from its formation to the mature structure. The outer stripe is the region of the kidney outer medulla that lies just below the cortex. The proximal straight tubules (S3) characterize this region.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"renal outer medulla development","termid":"GO:0072054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer stripe development","termid":"GO:0072058"}


id: PBO:0039110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor","termid":"PBO:0039110"}


id: RO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_succeeded_by","termid":"RO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"part_of_developmental_precursor_of","termid":"RO:0002287"}


id: PBO:0081931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1A","termid":"PBO:0081931"}


id: MONDO:0009200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eyebrow duplication-syndactyly syndrome is characterized by partial duplication of the eyebrows and syndactyly of the fingers and toes. It has been described in three patients (a brother and sister and an isolated case). Skin hyperelasticity, hypertrichosis and long eyelashes, and abnormal periorbital wrinkling were also reported in some of the patients. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:3172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eyebrow duplication-syndactyly syndrome","secondary_identifiers":["MESH:C536383","MEDGEN:347327","OMIM:227210","UMLS:C1856896","GARD:2216"],"synonyms":[{"name":"eyebrows duplication of, with stretchable skin and syndactyly","type":"related"},{"name":"eyebrows, DUPLICATION of, with stretchable skin and syndactyly","type":"related"}],"termid":"MONDO:0009200","xrefs":{"Monarch":{"xref_id":"0009200"}}}


id: PBO:0012217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_movement_of","termid":"PBO:0012217"}


id: PBO:0056292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoamine oxidase A","termid":"PBO:0056292"}


id: PBO:0081534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 444","termid":"PBO:0081534"}


id: GO:0033132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hexokinase activity","termid":"GO:1903300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glucokinase activity","synonyms":[{"name":"down regulation of glucokinase activity","type":"exact"},{"name":"down-regulation of glucokinase activity","type":"exact"},{"name":"downregulation of glucokinase activity","type":"exact"},{"name":"glucokinase inhibitor","type":"narrow"},{"name":"inhibition of glucokinase activity","type":"narrow"}],"termid":"GO:0033132"}


id: MONDO:0019592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. In gonochoristic organisms, congenital conditions in which development of chromosomal, gonadal, or anatomical sex is atypical. Effects from exposure to abnormal levels of gonadal hormones in the maternal environment, or disruption of the function of those hormones by ENDOCRINE DISRUPTORS are included.","definition_xrefs":["MESH:D012734"],"gene_count":0,"genotype_count":0,"name":"obsolete disorder of sex development (obsolete MONDO:0019592)","termid":"MONDO:0019592","xrefs":{"Monarch":{"xref_id":"0019592"}}}


id: MONDO:0014471
data:
  {"annotated_genes":["SJAG_02564","SJAG_07003","SJAG_00133","SJAG_01503"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020727"},{"annotations":[88683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032869"},{"annotations":[86926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014091"},{"annotations":[87312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011421"},{"annotations":[88364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957254"},{"annotations":[88363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957255"}]},"cv_name":"mondo","definition":"A rare, genetic, mitochondrial oxidative phosphorylation disorder that may present with a wide range of symptoms (including muscular hypotonia, hypertrophic cardiomyopathy, psychomotor delay, encephalopathy, peripheral neuropathy, lactic acidosis, 3-methylglutaconic aciduria) and clinical syndromes (including NARP and MILS).","definition_xrefs":["Orphanet:254913"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete isolated oxidative phosphorylation complex disorder (obsolete MONDO:0016805)","termid":"MONDO:0016805"},{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_01503":null,"SJAG_02564":null,"SJAG_07003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:902255625","DOID:0111143","GARD:18649","UMLS:C4757950","OMIMPS:604273","MEDGEN:1655626"],"synonyms":[{"name":"isolated ATP synthase deficiency","type":"narrow"},{"name":"isolated mitochondrial respiratory chain complex V deficiency","type":"narrow"},{"name":"mitochondrial complex V (ATP synthase) deficiency","type":"exact"}],"termid":"MONDO:0014471","terms_by_termid":{"MONDO:0011421":null,"MONDO:0014091":null,"MONDO:0020727":null,"MONDO:0032869":null,"MONDO:0957254":null,"MONDO:0957255":null},"xrefs":{"Monarch":{"xref_id":"0014471"}}}


id: MONDO:1012129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin A deficiency, non-human animal","termid":"MONDO:1011726"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin A deficiency, gray wolf","secondary_identifiers":["OMIA:000552-9612"],"termid":"MONDO:1012129","xrefs":{"Monarch":{"xref_id":"1012129"}}}


id: MONDO:0007165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic ataxia with congenital miosis is a rare hereditary ataxia characterized by an apparently non-progressive or slowly progressive symmetrical ataxia of gait, pyramidal signs in the limbs, spasticity and hyperreflexia (especially in the lower limbs) together with dysarthria and impaired pupillary reaction to light, presenting as a fixed miosis (with pupils that seldom exceed 2 mm in diameter and dilate poorly with mydriatics). Nystagmus may also be present.","definition_xrefs":["Orphanet:1182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant spastic ataxia","termid":"MONDO:0017846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"spastic ataxia 7","secondary_identifiers":["MESH:C566247","OMIM:108650","SCTID:763669001","DOID:0050945","GARD:16560","MEDGEN:354750","UMLS:C1862441","ICD10CM:G11.4"],"synonyms":[{"name":"SPAX7","type":"exact"},{"name":"autosomal dominant spastic ataxia type 7","type":"exact"},{"name":"miosis, congenital, with spastic ataxia","type":"related"},{"name":"spastic ataxia 7, autosomal dominant","type":"related"},{"name":"spastic ataxia type 7","type":"exact"},{"name":"spastic ataxia with congenital miosis","type":"related"}],"termid":"MONDO:0007165","xrefs":{"Monarch":{"xref_id":"0007165"}}}


id: GO:0019304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose, that occurs in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnose catabolic process","termid":"GO:0019301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"anaerobic rhamnose catabolic process","synonyms":[{"name":"anaerobic rhamnose breakdown","type":"exact"},{"name":"anaerobic rhamnose catabolism","type":"exact"},{"name":"anaerobic rhamnose degradation","type":"exact"}],"termid":"GO:0019304"}


id: MONDO:1010768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitiligo that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitiligo, non-human animal","termid":"MONDO:1010136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo, cattle","secondary_identifiers":["OMIA:001055-9913"],"termid":"MONDO:1010768","xrefs":{"Monarch":{"xref_id":"1010768"}}}


id: FYPO:0002364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H4 acetylation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone acetylation during vegetative growth","termid":"FYPO:0000456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H4 acetylation during vegetative growth","synonyms":[{"name":"abnormal histone H4 acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002364"}


id: MONDO:0044725
data:
  {"annotated_genes":["SJAG_00874"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86903],"is_not":false,"summary":null,"term":"MONDO:0044725"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00874":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to GINS1 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17941","UMLS:C5568132","OMIM:617827","Orphanet:505227","DOID:0111993","MEDGEN:1799555"],"synonyms":[{"name":"CID due to GINS1 deficiency","type":"exact"},{"name":"IMD55","type":"related"},{"name":"combined immunodeficiency with intrauterine growth retardation-NK cell deficiency-neutropenia","type":"exact"},{"name":"combined immunodeficiency with intrauterine growth retardation-natural killer cell deficiency-neutropenia","type":"exact"},{"name":"immunodeficiency 55","type":"related"}],"termid":"MONDO:0044725","terms_by_termid":{"MONDO:0044725":null},"xrefs":{"Monarch":{"xref_id":"0044725"}}}


id: GO:1901107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving granaticin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"granaticin metabolic process","synonyms":[{"name":"granaticin metabolism","type":"exact"}],"termid":"GO:1901107"}


id: MONDO:0012028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune disease, susceptibility to, 3","secondary_identifiers":["MEDGEN:333993","OMIM:608392","UMLS:C1842112"],"synonyms":[{"name":"AIS3","type":"exact"},{"name":"autoimmune disease susceptibility locus, chromosome 8-related","type":"related"},{"name":"autoimmune disease, susceptibility to, 3","type":"exact"},{"name":"vitiligo-associated multiple autoimmune disease susceptibility 4","type":"related"}],"termid":"MONDO:0012028","xrefs":{"Monarch":{"xref_id":"0012028"}}}


id: GO:0019463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glycine into other compounds, including creatine.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine catabolic process to creatine (obsolete GO:0019463)","synonyms":[{"name":"glycine breakdown to creatine","type":"exact"},{"name":"glycine degradation to creatine","type":"exact"}],"termid":"GO:0019463"}


id: FYPO:0001752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of homocitrate synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased homocitrate synthase activity","synonyms":[{"name":"reduced homocitrate synthase activity","type":"exact"}],"termid":"FYPO:0001752"}


id: GO:0034199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of the inactive enzyme protein kinase A.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of protein kinase activity","termid":"GO:0032147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of protein kinase A activity","secondary_identifiers":["Reactome:R-HSA-163615"],"synonyms":[{"name":"protein kinase A activation","type":"exact"}],"termid":"GO:0034199"}


id: MONDO:0024301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of mineral metabolism disease that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"acquired mineral metabolism disease","secondary_identifiers":["DOID:0050032"],"synonyms":[{"name":"acquired mineral metabolism disease","type":"exact"},{"name":"mineral metabolism disease","type":"related"}],"termid":"MONDO:0024301","xrefs":{"Monarch":{"xref_id":"0024301"}}}


id: GO:0021580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the medulla oblongata. This process pertains to the initial formation of a structure from unspecified parts. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hindbrain formation","termid":"GO:0021576"},{"relation_name":"part_of","term_name":"medulla oblongata morphogenesis","termid":"GO:0021579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata formation","synonyms":[{"name":"medulla biosynthesis","type":"related"},{"name":"medulla formation","type":"related"},{"name":"myelencephalon biosynthesis","type":"related"},{"name":"myelencephalon formation","type":"related"}],"termid":"GO:0021580"}


id: GO:1905803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23721876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to manganese ion","termid":"GO:1905802"},{"relation_name":"negatively_regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to manganese ion","synonyms":[{"name":"down regulation of cellular response to manganese","type":"exact"},{"name":"down regulation of cellular response to manganese ion","type":"exact"},{"name":"down-regulation of cellular response to manganese","type":"exact"},{"name":"down-regulation of cellular response to manganese ion","type":"exact"},{"name":"downregulation of cellular response to manganese","type":"exact"},{"name":"downregulation of cellular response to manganese ion","type":"exact"},{"name":"inhibition of cellular response to manganese","type":"narrow"},{"name":"inhibition of cellular response to manganese ion","type":"narrow"},{"name":"negative regulation of cellular response to manganese","type":"exact"}],"termid":"GO:1905803"}


id: GO:0007174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of epidermal growth factor (EGF), following internalization of the receptor-bound ligand into the signal-receiving cell. Full breakdown of epidermal growth factor results in a ligand that is unable to bind and activate its receptor.","definition_xrefs":["GOC:bf","GOC:signaling","PMID:2985587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0030163","GO:0008150"],"is_obsolete":false,"name":"epidermal growth factor catabolic process","synonyms":[{"name":"EGF breakdown","type":"exact"},{"name":"EGF catabolism","type":"exact"},{"name":"EGF receptor ligand processing","type":"related"},{"name":"epidermal growth factor breakdown","type":"exact"},{"name":"epidermal growth factor catabolism","type":"exact"},{"name":"epidermal growth factor ligand processing","type":"related"},{"name":"intracellular EGF processing","type":"related"},{"name":"receptor-mediated EGF processing","type":"related"}],"termid":"GO:0007174"}


id: PBO:0028748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_containing_anucleate_spores","termid":"PBO:0028748"}


id: PBO:0061610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NudC domain containing 1","termid":"PBO:0061610"}


id: MOD:01649
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tyrosine removal","termid":"MOD:01649"}


id: SO:0001935
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 20th residue (a lysine), from the start of the H3 protein is tri-methylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K20_trimethylation_site","synonyms":[{"name":"H3K20 trimethylation site","type":"exact"}],"termid":"SO:0001935"}


id: GO:0010404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cell wall hydroxyproline-rich glycoprotein that consist of a core-protein backbone O-glycosylated by one or more complex carbohydrates.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall proteoglycan metabolic process","termid":"GO:0010384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall hydroxyproline-rich glycoprotein metabolic process","synonyms":[{"name":"cell wall hydroxyproline-rich glycoprotein metabolism","type":"exact"}],"termid":"GO:0010404"}


id: GO:1903747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of protein localization to mitochondrion.","definition_xrefs":["GOC:TermGenie","PMID:16857185","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein localization to mitochondrion","synonyms":[{"name":"regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"regulation of establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:1903747"}


id: MONDO:0018084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Uhl anomaly is characterized by an almost complete absence of the myocardium in the right ventricle resulting in a thin walled nonfunctional right ventricle manifesting with cardiac arrhythmias and right ventricular failure. Cases of partial absence of right ventricular myocardium which remains asymptomatic or mildly symptomatic until adulthood have also been reported. Patients presenting with complete Uhl anomaly should be considered for cardiac transplantation.","definition_xrefs":["Orphanet:3403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Uhl anomaly","secondary_identifiers":["MESH:C536932","MedDRA:10048951","MEDGEN:78576","GARD:5393","UMLS:C0265857"],"synonyms":[{"name":"Uhl's anomaly","type":"related"},{"name":"parchment right ventricle","type":"related"}],"termid":"MONDO:0018084","xrefs":{"Monarch":{"xref_id":"0018084"}}}


id: SO:0001325
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_methylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_methylguanosine","secondary_identifiers":["RNAMOD:030"],"synonyms":[{"name":"N2 methylguanosine","type":"exact"},{"name":"N2-methylguanosine","type":"exact"},{"name":"m2G","type":"exact"}],"termid":"SO:0001325"}


id: PBO:0041360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4BPA pseudogene 3","termid":"PBO:0041360"}


id: PBO:0079731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 8 (pseudogene)","termid":"PBO:0079731"}


id: PBO:0017073
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae RPR1","termid":"PBO:0017073"}


id: PR:O74510
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt3 gene.","definition_xrefs":["UniProtKB:O74510","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.07c","synonyms":[{"name":"Spom972h-bqt3","type":"exact"}],"termid":"PR:O74510"}


id: PBO:0038708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 2","termid":"PBO:0038708"}


id: MONDO:0023833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal choroiditis (MFC) is an inflammatory disorder characterized by swelling of the eye (called uveitis) and multiple lesions in the choroid, a layer of blood vessels between the white of the eye and the retina. Symptoms include blurry vision, floaters, sensitivity to light, blind spots and mild eye discomfort. Though the cause is unknown, multifocal choroiditis is seen most frequently in women ages 20 to 60, and usually affects both eyes. MFC is generally treated with steroid medication that can be taken orally or injected into the eye. Multifocal choroiditis is a chronic condition, thus symptoms may return or worsen even after successful treatment.","definition_xrefs":["GARD:0009824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choroiditis","termid":"MONDO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"multifocal choroiditis","secondary_identifiers":["MESH:C537374","UMLS:C1533060","GARD:9824","SCTID:414783007","icd11.foundation:1197219411","MEDGEN:288551","MESH:D000080364"],"termid":"MONDO:0023833","xrefs":{"Monarch":{"xref_id":"0023833"}}}


id: PBO:0034699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocytic docking protein Mso1","termid":"PBO:0034699"}


id: PBO:0032716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_error-free_translesion_synthesis","termid":"PBO:0032716"}


id: PBO:0047371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 3","termid":"PBO:0047371"}


id: PBO:0057882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3186","termid":"PBO:0057882"}


id: PBO:0040920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"base methyltransferase of 25S rRNA 2 homolog","termid":"PBO:0040920"}


id: PBO:0038774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T2","termid":"PBO:0038774"}


id: PBO:0054630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2035","termid":"PBO:0054630"}


id: PBO:0064515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit K pseudogene 2","termid":"PBO:0064515"}


id: GO:0052662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-zeaxanthin + 4 H+ + 2 O2 + 4 reduced [2Fe-2S]-[ferredoxin] = all-trans-violaxanthin + 2 H2O + 4 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:32443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"zeaxanthin epoxidase activity","secondary_identifiers":["GO:0052663","MetaCyc:RXN-13193","EC:1.14.15.21","GO:0009540","KEGG_REACTION:R10070"],"synonyms":[{"name":"antheraxanthin epoxidase activity","type":"narrow"},{"name":"zea-epoxidase activity","type":"related"},{"name":"zeaxanthin epoxidase [overall] activity","type":"related"}],"termid":"GO:0052662"}


id: PBO:0004437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex alpha subunit Egd2","termid":"PBO:0004437"}


id: PBO:0074065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 40","termid":"PBO:0074065"}


id: PBO:0061266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notum, palmitoleoyl-protein carboxylesterase","termid":"PBO:0061266"}


id: PBO:0048621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 2","termid":"PBO:0048621"}


id: GO:0038082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate, where the MAP kinase (MAPK) is part of a MAPK signaling cascade that passes on a signal within an osmosensory signaling pathway.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase phosphatase activity involved in regulation of osmosensory signaling pathway (obsolete GO:0038082)","synonyms":[{"name":"Hog1 phosphatase activity","type":"narrow"},{"name":"MAP kinase phosphatase activity involved in regulation of osmosensory signalling pathway","type":"exact"},{"name":"MAPK phosphatase activity involved in regulation of osmosensory signaling pathway","type":"exact"}],"termid":"GO:0038082"}


id: PATO:0001805
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's formed or tending to form flakes or thin, crisp fragments.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flaky","termid":"PATO:0001805"}


id: MONDO:0004664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection characterized by the infestation with worms, mainly in the intestine.","definition_xrefs":["NCIT:C84751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helminthiasis","secondary_identifiers":["MESH:D006373","UMLS:C0018889","ICD9:120-129.99","EFO:1001342","SCTID:27601005","ICD9:128.9","ICD10CM:B65-B83","MEDGEN:6765","ICD9:128.8","DOID:883"],"synonyms":[{"name":"helminth infection","type":"exact"},{"name":"helminthiasis","type":"exact"},{"name":"helminthosis","type":"exact"},{"name":"parasitic helminthiasis infectious disease","type":"exact"},{"name":"worm infection","type":"related"}],"termid":"MONDO:0004664","xrefs":{"Monarch":{"xref_id":"0004664"}}}


id: PBO:0044492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP51A1 antisense RNA 1","termid":"PBO:0044492"}


id: PBO:0029960
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytochrome-c_oxidase_activity","termid":"PBO:0029960"}


id: PBO:0074946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 110","termid":"PBO:0074946"}


id: PBO:0033747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033747"}


id: PBO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L13/L16 (predicted)","termid":"PBO:0002365"}


id: PBO:0116247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit f","termid":"PBO:0116247"}


id: PATO:0000182
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000182 abdominal tone (obsolete PATO:0000182)","termid":"PATO:0000182"}


id: MONDO:0019248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of inherited lysosomal storage diseases characterized by accumulation of lipids and carbohydrates in the tissues, resulting in mental disabilities and skeletal malformations.","definition_xrefs":["NCIT:C61267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"glycoproteinosis","termid":"MONDO:0017731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"mucolipidosis","secondary_identifiers":["UMLS:C0026697","MEDGEN:7731","Orphanet:79212","DOID:0080488","icd11.foundation:714623911","SCTID:70528007","GARD:18975","MESH:D009081"],"termid":"MONDO:0019248","xrefs":{"Monarch":{"xref_id":"0019248"}}}


id: MONDO:0017925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"T-cell immunodeficiency with epidermodysplasia verruciformis is a rare primary immunodeficiency characterized by increased susceptibility to infection by human papillomavirus, presenting in childhood with disseminated flat wart-like cutaneous lesions. Burkitt lymphoma has also been reported. Whilst total T-cell counts are normal, there is impaired TCR signaling, profound peripheral naive T-cell lymphopenia with memory T-cells displaying an exhaustion phenotype.","definition_xrefs":["Orphanet:324294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-cell immunodeficiency with epidermodysplasia verruciformis","secondary_identifiers":["MEDGEN:1648416","UMLS:C4749500","GARD:17483"],"synonyms":[{"name":"T-cell immunodeficiency due to RHOH deficiency","type":"exact"}],"termid":"MONDO:0017925","xrefs":{"Monarch":{"xref_id":"0017925"}}}


id: FYPO:0006498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to UV","synonyms":[{"name":"increased protein phosphorylation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to UV during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0006498"}


id: PATO:0001242
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which is equal to the distance between repeating units of a wave pattern.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wavelength","termid":"PATO:0001242"}


id: MONDO:0009651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudo-Hurler polydystrophy (obsolete MONDO:0009651)","termid":"MONDO:0009651","xrefs":{"Monarch":{"xref_id":"0009651"}}}


id: GO:0048827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a phyllome over time, from its formation to the mature structure. A phyllome is a collective term for all the different types of leaves appearing on plants.","definition_xrefs":["PO:0006001","GOC:devbiol","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phyllome development","termid":"GO:0048827"}


id: PBO:0062742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 1","termid":"PBO:0062742"}


id: PBO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase Tkt1","termid":"PBO:0090424"}


id: PBO:0050288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNF1A antisense RNA 1","termid":"PBO:0050288"}


id: GO:0061289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of the target cell, resulting a change in cell state that contributes to the progression of the kidney over time.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in kidney development (obsolete GO:0061289)","synonyms":[{"name":"Wnt receptor signaling pathway involved in kidney development","type":"exact"},{"name":"Wnt receptor signalling pathway involved in kidney development","type":"exact"},{"name":"Wnt-activated signaling pathway involved in kidney development","type":"exact"}],"termid":"GO:0061289"}


id: FYPO:0004635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000932"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to mitotic spindle","synonyms":[{"name":"increased protein localisation to mitotic spindle","type":"exact"},{"name":"increased protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"increased protein localization to spindle during mitosis","type":"exact"},{"name":"increased protein localization to spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0004635"}


id: PBO:0052745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 37","termid":"PBO:0052745"}


id: GO:0071133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM8.","definition_xrefs":["PMID:16995821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM8 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM8 complex","type":"narrow"}],"termid":"GO:0071133"}


id: PBO:0062139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 6","termid":"PBO:0062139"}


id: GO:0032355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen.","definition_xrefs":["ISBN:0911910123","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to estradiol","synonyms":[{"name":"response to E2 stimulus","type":"exact"},{"name":"response to estradiol stimulus","type":"exact"}],"termid":"GO:0032355"}


id: MONDO:0012912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by a constellation of clinical features collectively termed Albright hereditary osteodystrophy (AHO) but no evidence of resistance to parathyroid hormone (PTH), which is seen in other forms of pseudohypoparathyroidism (PHP).","definition_xrefs":["Orphanet:79445"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"},{"relation_name":"is_a","term_name":"pseudohypoparathyroidism","termid":"MONDO:0019992"},{"relation_name":"is_a","term_name":"disorder of GNAS inactivation","termid":"MONDO:0800466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"pseudopseudohypoparathyroidism","secondary_identifiers":["UMLS:C0033835","SCTID:237659007","NANDO:2200348","ICD9:275.49","OMIM:612463","Orphanet:665","NCIT:C129722","icd11.foundation:245649135","DOID:4183","GARD:7860","MEDGEN:10995","MESH:D011556"],"synonyms":[{"name":"Albright Hereditary osteodystrophy with multiple hormone resistance","type":"exact"},{"name":"Albright hereditary osteodystrophy without multiple hormone resistance","type":"related"},{"name":"Albright hereditary osteodystrophy-PPHP syndrome","type":"exact"},{"name":"Normocalcemic pseudohypoparathyroidism","type":"exact"},{"name":"Normocalcemic pseudohypoparathyroidism (disorder) [ambiguous]","type":"exact"},{"name":"PPHP","type":"related"},{"name":"Pseudopseudo-hypoparathyroidism","type":"related"},{"name":"aho-PPHP syndrome","type":"exact"},{"name":"pseudo-pseudohypoparathyroidism","type":"related"},{"name":"pseudopseudohypoparathyroidism","type":"exact"}],"termid":"MONDO:0012912","xrefs":{"Monarch":{"xref_id":"0012912"}}}


id: GO:0016826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid sulfur-nitrogen bond.","definition_xrefs":["EC:3.10.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on acid sulfur-nitrogen bonds","synonyms":[{"name":"hydrolase activity, acting on acid sulphur-nitrogen bonds","type":"exact"}],"termid":"GO:0016826"}


id: MONDO:1010871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any mucopolysaccharidosis that occurs in dogs due to a mutation in the GUSB gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis, GUSB-related, dog","secondary_identifiers":["OMIA:000667-9615"],"synonyms":[{"name":"mucopolysaccharidosis VII, dog","type":"related"}],"termid":"MONDO:1010871","xrefs":{"Monarch":{"xref_id":"1010871"}}}


id: PBO:0062776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 4","termid":"PBO:0062776"}


id: MOD:00185
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-4'-bromophenylalanine.","definition_xrefs":["PubMed:9033387","PubMed:2076468","RESID:AA0176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated L-phenylalanine","termid":"MOD:00972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-4'-bromophenylalanine","synonyms":[{"name":"(2S)-2-amino-3-(4-bromophenyl)propanoic acid","type":"exact"},{"name":"4'BrPhe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-4'-bromophenylalanine","type":"exact"},{"name":"bromination","type":"related"},{"name":"p-bromophenylalanine","type":"exact"},{"name":"para-bromophenylalanine","type":"exact"}],"termid":"MOD:00185"}


id: GO:1900789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pseurotin A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam catabolic process","termid":"GO:0072340"},{"relation_name":"is_a","term_name":"pseurotin A metabolic process","termid":"GO:1900788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pseurotin A catabolic process","synonyms":[{"name":"Pseurotin breakdown","type":"related"},{"name":"Pseurotin catabolic process","type":"related"},{"name":"Pseurotin catabolism","type":"related"},{"name":"Pseurotin degradation","type":"related"},{"name":"pseurotin A breakdown","type":"exact"},{"name":"pseurotin A catabolism","type":"exact"},{"name":"pseurotin A degradation","type":"exact"}],"termid":"GO:1900789"}


id: PBO:0081435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 286A","termid":"PBO:0081435"}


id: PBO:0039033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 10, pseudogene","termid":"PBO:0039033"}


id: FYPO:0007600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrial outer membrane is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitochondrion","termid":"FYPO:0004336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to mitochondrial outer membrane","synonyms":[{"name":"decreased protein localisation to mitochondrial outer membrane","type":"exact"},{"name":"decreased protein localization to mitochondrial outer membrane during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to mitochondrial outer membrane during vegetative growth","type":"exact"},{"name":"decreased protein localization to mitochondrion outer membrane","type":"exact"},{"name":"reduced protein localization to mitochondrial outer membrane","type":"exact"}],"termid":"FYPO:0007600"}


id: MONDO:0015433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 17 syndrome is a rare chromosomal anomaly syndrome, resulting from partial deletion of chromosome 17, characterized by highly variable manifestations, ranging from a severe phenotype which presents with lissencephaly and severe intellectual disability to a milder phenotype that includes short stature, microcephaly, intellectual disability, seizures (that may be pharmacoresistant), café-au-lait spots, retinal flecks and minor facial dysmorphism, depending on the presence or absence of the Miller-Dieker critical region.","definition_xrefs":["Orphanet:1441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 17 disorder","termid":"MONDO:0020583"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 17","secondary_identifiers":["MEDGEN:419477","GARD:4724","UMLS:C2931714","MESH:C538046"],"synonyms":[{"name":"R17","type":"related"},{"name":"Ring 17","type":"related"},{"name":"Ring chromosome 17 syndrome","type":"related"},{"name":"Ring chromosome type 17","type":"exact"},{"name":"chromosome 17 ring","type":"related"}],"termid":"MONDO:0015433","xrefs":{"Monarch":{"xref_id":"0015433"}}}


id: MONDO:0009234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive inherited disorder characterized by prolonged partial thromboplastin time and absence of bleeding diathesis.","definition_xrefs":["NCIT:C98946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital high-molecular-weight kininogen deficiency","secondary_identifiers":["UMLS:C0272340","GARD:2684","NANDO:2200685","OMIM:228960","DOID:0111676","MEDGEN:75780","SCTID:27312002","icd11.foundation:453135247","ICD9:286.9","MESH:C537060","Orphanet:483"],"synonyms":[{"name":"Fitzgerald trait","type":"related"},{"name":"Fitzgerald trait kininogen deficiency, total, included","type":"related"},{"name":"Flaujeac factor deficiency","type":"related"},{"name":"Flaujeac trait","type":"related"},{"name":"Flaujeac trait, included","type":"related"},{"name":"HMWK","type":"related"},{"name":"HMWK deficiency","type":"related"},{"name":"Williams trait","type":"related"},{"name":"Williams trait, included","type":"related"},{"name":"high molecular weight kininogen deficiency","type":"exact"},{"name":"high-molecular-weight kininogen deficiency, congenital","type":"related"},{"name":"kininogen deficiency","type":"exact"},{"name":"kininogen deficiency, high molecular weight","type":"related"},{"name":"kininogen deficiency, high molecular weight and LOW molecular weight, included","type":"related"},{"name":"kininogen deficiency, high molecular weight and Low molecular weight","type":"related"},{"name":"kininogen deficiency, total","type":"related"}],"termid":"MONDO:0009234","xrefs":{"Monarch":{"xref_id":"0009234"}}}


id: PBO:0029229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_EPC","termid":"PBO:0029229"}


id: GO:0015261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete lactate channel activity (obsolete GO:0015261)","synonyms":[{"name":"lactate channel activity","type":"exact"}],"termid":"GO:0015261"}


id: PBO:0077108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 13","termid":"PBO:0077108"}


id: PBO:0069392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 652, pseudogene","termid":"PBO:0069392"}


id: PBO:0081771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 703","termid":"PBO:0081771"}


id: MONDO:0700170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasm that occurs in a horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"},{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equine neoplasm","termid":"MONDO:0700170","xrefs":{"Monarch":{"xref_id":"0700170"}}}


id: PR:Q9UU84
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug170 gene.","definition_xrefs":["UniProtKB:Q9UU84","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 170 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.03","synonyms":[{"name":"Spom972h-mug170","type":"exact"}],"termid":"PR:Q9UU84"}


id: FYPO:0001832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which phosphoglycerate mutase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphoglycerate mutase activity","termid":"FYPO:0001831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished phosphoglycerate mutase activity","synonyms":[{"name":"phosphoglycerate mutase activity abolished","type":"exact"}],"termid":"FYPO:0001832"}


id: PR:Q9Y709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- skp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of kinetochore protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.05","synonyms":[{"name":"P19/Skp1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-skp1","type":"exact"}],"termid":"PR:Q9Y709"}


id: PBO:0047089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member A","termid":"PBO:0047089"}


id: MONDO:0958349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lipomatous, dysraphic malformation characterized by attachment to the dorsal surface of the spinal cord but not extending to the conus. It can be associated with others features such as a stalk and vertebral bone abnormalities.","definition_xrefs":["Orphanet:645362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphic spinal cord lipoma","termid":"MONDO:0958260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"dorsal spinal cord lipoma","secondary_identifiers":["MEDGEN:741207","UMLS:C1827419"],"termid":"MONDO:0958349","xrefs":{"Monarch":{"xref_id":"0958349"}}}


id: PBO:0052218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium sodium-activated channel subfamily T member 2","termid":"PBO:0052218"}


id: GO:0007350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hierarchical steps resulting in the progressive subdivision of the anterior/posterior axis of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastoderm segmentation","termid":"GO:0007350"}


id: PBO:0044875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 4C","termid":"PBO:0044875"}


id: FYPO:0000877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"decreased centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000877"}


id: GO:0031407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any oxylipin, any of a group of biologically active compounds formed by oxidative metabolism of polyunsaturated fatty acids.","definition_xrefs":["GOC:mah","PMID:11960741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"oxylipin metabolic process","synonyms":[{"name":"oxylipin metabolism","type":"exact"}],"termid":"GO:0031407"}


id: MONDO:0015115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic metabolic liver disease (obsolete MONDO:0015115)","secondary_identifiers":["Orphanet:101940","MedDRA:10019689"],"termid":"MONDO:0015115","xrefs":{"Monarch":{"xref_id":"0015115"}}}


id: MONDO:0044144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder in which an individual experiences recurrent, unexpected panic attacks and persistent concern about having additional panic attacks. Agoraphobia is a component of this disorder.","definition_xrefs":["NCIT:C97194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agoraphobia","termid":"MONDO:0003709"},{"relation_name":"is_a","term_name":"panic disorder","termid":"MONDO:0005383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panic disorder with agoraphobia","secondary_identifiers":["SCTID:35607004","MEDGEN:472969","UMLS:C0236800"],"synonyms":[{"name":"panic disorder with agoraphobia","type":"exact"}],"termid":"MONDO:0044144","xrefs":{"Monarch":{"xref_id":"0044144"}}}


id: PBO:0084219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase); dimeric enzyme that catalyzes the third step in the common pathway for methionine and threonine biosynthesis; enzyme has nucleotide-binding, dimerization and catalytic regions","termid":"PBO:0084219"}


id: GO:0046347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannosomine, 2-amino-2-deoxymannose; the D-isomer is a constituent of neuraminic acids as well as mucolipids and mucoproteins.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosamine metabolic process","termid":"GO:0006050"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannosamine biosynthetic process","synonyms":[{"name":"mannosamine anabolism","type":"exact"},{"name":"mannosamine biosynthesis","type":"exact"},{"name":"mannosamine formation","type":"exact"},{"name":"mannosamine synthesis","type":"exact"}],"termid":"GO:0046347"}


id: PR:Q9P7D8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7D8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized rhomboid protein P4H10.10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.10","synonyms":[{"name":"Spom972h-SPBP4H10.10","type":"exact"}],"termid":"PR:Q9P7D8"}


id: FYPO:0000317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a population contains cells with more than one phenotype, usually different morphologies.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mixed population (obsolete FYPO:0000317)","termid":"FYPO:0000317"}


id: MONDO:0014708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 14 syndrome is characterized by intellectual deficit, retinal and skin pigmentation disorders, seizures, and dysmorphic features, including flat occiput, epicanthal folds, downward slanting eyes, flat nasal bridge, upturned nostrils, short neck, and large low set ears.","definition_xrefs":["Orphanet:1440"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"chromosome 14 disorder","termid":"MONDO:0700021"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 14","secondary_identifiers":["SCTID:702345009","NORD:939","UMLS:C2930916","ICD9:758.89","MESH:C535487","OMIM:616606","GARD:6072","MEDGEN:419284"],"synonyms":[{"name":"Chromosome 14 Ring","type":"exact"},{"name":"RING chromosome 14 syndrome","type":"related"},{"name":"Ring 14","type":"related"},{"name":"Ring chromosome type 14","type":"exact"},{"name":"chromosome 14 ring","type":"related"},{"name":"ring chromosome 14 syndrome, isolated cases","type":"exact"}],"termid":"MONDO:0014708","xrefs":{"Monarch":{"xref_id":"0014708"}}}


id: PR:Q10224
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trm9 gene.","definition_xrefs":["UniProtKB:Q10224","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (carboxymethyluridine(34)-5-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.03c","synonyms":[{"name":"Spom972h-trm9","type":"exact"},{"name":"tRNA (uracil-5-)-methyltransferase trm9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA [Um34] methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA methylase 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10224"}


id: GO:0003016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.","definition_xrefs":["GOC:mtg_cardio","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"},{"relation_name":"part_of","term_name":"respiratory gaseous exchange by respiratory system","termid":"GO:0007585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory system process","secondary_identifiers":["GO:0010802"],"synonyms":[{"name":"respiratory gaseous exchange","type":"exact"}],"termid":"GO:0003016"}


id: PBO:0089065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acyl-CoA binding protein Acb1","termid":"PBO:0089065"}


id: GO:0061790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a dense core granule membrane to the plasma membrane.","definition_xrefs":["PMID:26575293","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"part_of","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0140056","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"dense core granule docking","termid":"GO:0061790"}


id: GO:0015085
data:
  {"annotated_genes":["SJAG_04028","SJAG_01400","SJAG_04096","SJAG_04698","SJAG_03850","SJAG_02322","SJAG_04471","SJAG_01090","SJAG_02019","SJAG_05229","SJAG_02877","SJAG_04668","SJAG_02532"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111322],"is_not":false,"summary":null,"term":"GO:0015085"},{"annotations":[79033,116417,74172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[71854,93035,80199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[76209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[82026,73174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[101510,94189,94247,115901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transfer of calcium (Ca) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03850":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04471":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"calcium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRANS-RXN-144","Reactome:R-HSA-2534359"],"termid":"GO:0015085","terms_by_termid":{"GO:0005262":null,"GO:0005388":null,"GO:0008331":null,"GO:0015085":null,"GO:0015275":null,"GO:0015369":null}}


id: PBO:0043598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXVII alpha 1 chain","termid":"PBO:0043598"}


id: PBO:0090838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH tandem zinc finger protein, human Tristetraprolin homolog Zfs1, involved in mRNA catabolism","termid":"PBO:0090838"}


id: GO:0033283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an organic acid from one side of a membrane to the other according to the reaction: ATP + H2O + organic acid(out/in) = ADP + phosphate + organic acid(in/out).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid transmembrane transporter activity","termid":"GO:0005342"},{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled organic acid transmembrane transporter activity","synonyms":[{"name":"ATP-dependent organic acid transmembrane transporter activity","type":"exact"},{"name":"organic acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0033283"}


id: PBO:0116746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 related chromatin remodeling ATPase with DExD box 1","termid":"PBO:0116746"}


id: GO:1903588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood vessel endothelial cell proliferation involved in sprouting angiogenesis.","definition_xrefs":["PMID:23388056","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell proliferation","termid":"GO:0001937"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:1903587"},{"relation_name":"negatively_regulates","term_name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"down regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"down regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"down-regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"down-regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"downregulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"downregulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"inhibition of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"inhibition of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"narrow"},{"name":"negative regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"}],"termid":"GO:1903588"}


id: GO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A punctate, filamentous structure composed of Bcl10 that appears in the cytoplasm of T-cells shortly after T-cell receptor stimulation. Polkadots stands for Punctate Oligomeric Killing and Activating DOmains Transducing Signals.","definition_xrefs":["PMID:16495340","PMID:14724296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"polkadots","termid":"GO:0002096"}


id: PBO:0032728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_MCB_promoter","termid":"PBO:0032728"}


id: GO:1901706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of bone as it progresses from its formation to the mature state.","definition_xrefs":["GOC:TermGenie","PMID:21571217","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in bone development","termid":"GO:1901706"}


id: PBO:0003349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial adenine nucleotide carrier Anc1","termid":"PBO:0003349"}


id: GO:1905188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metaphase/anaphase transition of meiosis I.","definition_xrefs":["PMID:21389117","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902104"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiosis I","termid":"GO:1905186"},{"relation_name":"positively_regulates","term_name":"metaphase/anaphase transition of meiosis I","termid":"GO:1990949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of metaphase/anaphase transition of meiosis I","synonyms":[{"name":"positive regulation of meiosis I metaphase/anaphase transition","type":"exact"}],"termid":"GO:1905188"}


id: PBO:0108834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase activating complex subunit Npr2","termid":"PBO:0108834"}


id: PBO:0109631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1B (pseudogene)","termid":"PBO:0109631"}


id: PBO:0084158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity tryptophan and tyrosine permease; overexpression confers FK506 and FTY720 resistance","termid":"PBO:0084158"}


id: GO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proteolytic digestion of components in the acrosomal matrix that occurs as part of the acrosome reaction. The process can occur either in the cumulus oophorous facilitating the penetration of it by the sperm, or at the zona pellucida allowing the sperm to reach the plasma membrane of the egg where the inner acrosomal membrane of the sperm can interact with the egg plasma membrane.","definition_xrefs":["GOC:dph","PMID:3886029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"},{"relation_name":"part_of","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"acrosome matrix dispersal","termid":"GO:0002077"}


id: PBO:0087701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RES complex; RES complex is required for nuclear pre-mRNA retention and splicing; involved in bud-site selection; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern due to a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids","termid":"PBO:0087701"}


id: PR:G2TRK1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A5.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.19","synonyms":[{"name":"Spom972h-SPAC17A5.19","type":"exact"}],"termid":"PR:G2TRK1"}


id: MONDO:0010961
data:
  {"annotated_genes":["SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87023],"is_not":false,"summary":null,"term":"MONDO:0010961"}]},"cv_name":"mondo","definition":"Prohormone convertase-I deficiency is the rarest form of monogenic obesity. The disorder is characterized by severe childhood obesity, hypoadrenalism, reactive hypoglycaemia, and elevated circulating levels of certain prohormones.","definition_xrefs":["Orphanet:71528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"inherited obesity","termid":"MONDO:0019182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"obesity due to prohormone convertase I deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:722053001","UMLS:C1833053","MEDGEN:318777","DOID:0111698","GARD:16689","MESH:C563423","OMIM:600955"],"synonyms":[{"name":"PCI deficiency","type":"exact"},{"name":"PCSK1 Deficiency","type":"exact"},{"name":"obesity and endocrinopathy due to impaired processing of prohormones","type":"related"},{"name":"obesity with impaired prohormone processing","type":"exact"},{"name":"proprotein convertase 1/3 deficiency","type":"related"}],"termid":"MONDO:0010961","terms_by_termid":{"MONDO:0010961":null},"xrefs":{"Monarch":{"xref_id":"0010961"}}}


id: PR:Q9UT74
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys2 gene.","definition_xrefs":["UniProtKB:Q9UT74","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoaconitase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.16","synonyms":[{"name":"Spom972h-lys2","type":"exact"},{"name":"homoaconitate hydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT74"}


id: PBO:0061280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 1","termid":"PBO:0061280"}


id: PBO:0017019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, human DHX29 ortholog (predicted)","termid":"PBO:0017019"}


id: PBO:0057585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 890","termid":"PBO:0057585"}


id: PBO:0063749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 14","termid":"PBO:0063749"}


id: PBO:0031505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_K-252a","termid":"PBO:0031505"}


id: GO:0047845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxylimonoate + H2O = deoxylimononate D-ring-lactone + H+.","definition_xrefs":["EC:3.1.1.46","RHEA:14997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"deoxylimonate A-ring-lactonase activity","secondary_identifiers":["MetaCyc:DEOXYLIMONATE-A-RING-LACTONASE-RXN","KEGG_REACTION:R03803"],"synonyms":[{"name":"deoxylimonate A-ring-lactonohydrolase activity","type":"related"}],"termid":"GO:0047845"}


id: FYPO:0001057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal amino acid import","synonyms":[{"name":"abnormal amino acid import across plasma membrane","type":"exact"},{"name":"abnormal amino acid import into cell","type":"exact"},{"name":"abnormal amino acid uptake","type":"exact"}],"termid":"FYPO:0001057"}


id: PATO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's having equal dimensions or measurements.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isometrical","termid":"PATO:0001573"}


id: GO:0008748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-ethylmaleimide + NADPH + 2 H+ = N-ethylsuccinimide + NADP+.","definition_xrefs":["MetaCyc:RXN0-5101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"N-ethylmaleimide reductase activity","secondary_identifiers":["RHEA:35523"],"termid":"GO:0008748"}


id: GO:1905139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the apical ectodermal ridge. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["PMID:9323126","GO_REF:0000081","GOC:TermGenie","PMID:18359901","PMID:9596583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"appendage morphogenesis","termid":"GO:0035107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical ectodermal ridge formation","synonyms":[{"name":"AER formation","type":"related"},{"name":"apical epidermal ridge formation","type":"exact"},{"name":"crista ectodermalis apicalis formation","type":"related"}],"termid":"GO:1905139"}


id: MONDO:0024386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of large cell lung carcinoma characterized by a predominance of clear cells that may or may not contain glycogen.","definition_xrefs":["NCIT:C4451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"large cell lung carcinoma, clear cell variant","secondary_identifiers":["ONCOTREE:CCLC","UMLS:C1707407","MEDGEN:317518"],"synonyms":[{"name":"clear cell carcinoma of lung, large cell type","type":"exact"},{"name":"clear cell carcinoma of the lung","type":"related"},{"name":"clear cell carcinoma of the lung, large cell type","type":"exact"},{"name":"clear cell lung carcinoma, large cell type","type":"exact"},{"name":"large cell lung carcinoma, clear cell variant","type":"exact"}],"termid":"MONDO:0024386","xrefs":{"Monarch":{"xref_id":"0024386"}}}


id: PBO:0044187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTR9 homolog, Paf1/RNA polymerase II complex component","termid":"PBO:0044187"}


id: MONDO:0010033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Generalized peeling skin syndrome (PSS) is a form of PSS presenting with a generalized distribution. It comprises two sub-types: the non-inflammatory (PSS type A) and the inflammatory (PSS type B) form. PSS type A is characterized by generalized white scaling with superficial peeling of the skin, while PSS type B is characterized by superficial patchy peeling of the entire skin with underlying erythroderma, associated with pruritus, and atopy.","definition_xrefs":["Orphanet:263543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peeling skin syndrome","termid":"MONDO:0019347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"generalized peeling skin syndrome","secondary_identifiers":["SCTID:718749004","UMLS:C4305156","MEDGEN:930825","GARD:12862"],"synonyms":[{"name":"PSS1","type":"related"},{"name":"generalised PSS","type":"exact"},{"name":"generalised deciduous skin","type":"exact"},{"name":"generalized PSS","type":"exact"},{"name":"generalized deciduous skin","type":"exact"},{"name":"peeling skin syndrome 1","type":"related"},{"name":"peeling skin syndrome type 1","type":"exact"}],"termid":"MONDO:0010033","xrefs":{"Monarch":{"xref_id":"0010033"}}}


id: PBO:0067825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 127","termid":"PBO:0067825"}


id: MONDO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ulcerative pyoderma usually caused by group A beta-hemolytic streptococcal infection at the site of minor trauma. (Dorland, 27th ed)","definition_xrefs":["MESH:D004473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impetigo","termid":"MONDO:0004592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ecthyma","secondary_identifiers":["ICD9:686.8","UMLS:C0013568","MEDGEN:8541","icd11.foundation:337308923","DOID:11907","SCTID:85791004"],"termid":"MONDO:0001404","xrefs":{"Monarch":{"xref_id":"0001404"}}}


id: PBO:0042186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B3","termid":"PBO:0042186"}


id: MONDO:0010820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders which feature impaired motor control characterized by bradykinesia, muscle rigidity; tremor; and postural instability. Parkinsonian diseases are generally divided into primary parkinsonism (see parkinson disease), secondary parkinsonism (see parkinson disease, secondary) and inherited forms. These conditions are associated with dysfunction of dopaminergic or closely related motor integration neuronal pathways in the basal ganglia.","definition_xrefs":["MESH:D020734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive juvenile Parkinson disease 2","secondary_identifiers":["OMIM:600116","MEDGEN:401500","UMLS:C1868675","DOID:0060368","GARD:9642"],"synonyms":[{"name":"JP","type":"related"},{"name":"PARK2","type":"related"},{"name":"PDJ","type":"related"},{"name":"PRKN young-onset Parkinson disease","type":"exact"},{"name":"Parkinson disease 2","type":"related"},{"name":"Parkinson disease 2, autosomal recessive juvenile","type":"related"},{"name":"Parkinson disease autosomal recessive, early onset","type":"related"},{"name":"Parkinson disease, juvenile, autosomal recessive","type":"related"},{"name":"Parkinson disease, juvenile, type 2","type":"exact"},{"name":"Parkinsonism, early onset, with diurnal fluctuation","type":"related"},{"name":"Parkinsonism, early-onset, with diurnal fluctuation","type":"related"},{"name":"autosomal recessive juvenile Parkinson disease","type":"related"},{"name":"autosomal recessive juvenile Parkinson disease 2","type":"exact"},{"name":"autosomal recessive juvenile Parkinson disease type 2","type":"exact"},{"name":"autosomal recessive juvenile Parkinson's disease 2","type":"related"},{"name":"juvenile parkinsonism","type":"related"},{"name":"young-onset Parkinson disease caused by mutation in PRKN","type":"exact"}],"termid":"MONDO:0010820","xrefs":{"Monarch":{"xref_id":"0010820"}}}


id: PATO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's behavior.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioral quality of a process","synonyms":[{"name":"behavioral quality of occurrent","type":"exact"}],"termid":"PATO:0001530"}


id: MONDO:0850110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous melanoma","termid":"MONDO:0005012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"melanoma in congenital melanocytic nevus","secondary_identifiers":["NCIT:C48613","MEDGEN:313976","UMLS:C1711221","DOID:0070327"],"termid":"MONDO:0850110","xrefs":{"Monarch":{"xref_id":"0850110"}}}


id: PBO:0030631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sucrose_carbon_source","termid":"PBO:0030631"}


id: PBO:0117242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor methyltransferase Efm7","termid":"PBO:0117242"}


id: PBO:0005616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid oxidase (predicted)","termid":"PBO:0005616"}


id: PBO:0075205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 17","termid":"PBO:0075205"}


id: PBO:0069336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 596, pseudogene","termid":"PBO:0069336"}


id: GO:1904446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of Sertoli cell barrier.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18057314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of establishment of Sertoli cell barrier","termid":"GO:1904444"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"establishment of Sertoli cell barrier","termid":"GO:0097368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of Sertoli cell barrier","synonyms":[{"name":"activation of establishment of BTB","type":"narrow"},{"name":"activation of establishment of SCB","type":"narrow"},{"name":"activation of establishment of Sertoli cell barrier","type":"narrow"},{"name":"activation of establishment of blood-testis barrier","type":"narrow"},{"name":"positive regulation of establishment of BTB","type":"exact"},{"name":"positive regulation of establishment of SCB","type":"exact"},{"name":"positive regulation of establishment of blood-testis barrier","type":"exact"},{"name":"up regulation of establishment of BTB","type":"exact"},{"name":"up regulation of establishment of SCB","type":"exact"},{"name":"up regulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"up regulation of establishment of blood-testis barrier","type":"exact"},{"name":"up-regulation of establishment of BTB","type":"exact"},{"name":"up-regulation of establishment of SCB","type":"exact"},{"name":"up-regulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"up-regulation of establishment of blood-testis barrier","type":"exact"},{"name":"upregulation of establishment of BTB","type":"exact"},{"name":"upregulation of establishment of SCB","type":"exact"},{"name":"upregulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"upregulation of establishment of blood-testis barrier","type":"exact"}],"termid":"GO:1904446"}


id: PR:O14302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cyk3 gene.","definition_xrefs":["UniProtKB:O14302","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokinesis protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.06c","synonyms":[{"name":"Spom972h-cyk3","type":"exact"}],"termid":"PR:O14302"}


id: GO:2000636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of primary microRNA processing.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of miRNA processing","termid":"GO:1903800"},{"relation_name":"is_a","term_name":"regulation of primary miRNA processing","termid":"GO:2000634"},{"relation_name":"positively_regulates","term_name":"primary miRNA processing","termid":"GO:0031053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of primary miRNA processing","synonyms":[{"name":"positive regulation of pri-miRNA processing","type":"exact"},{"name":"positive regulation of primary microRNA processing","type":"exact"}],"termid":"GO:2000636"}


id: PBO:0000718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase Sod1","termid":"PBO:0000718"}


id: GO:0019245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D(-)-lactate from other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate biosynthetic process from pyruvate","termid":"GO:0019244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D(-)-lactate biosynthetic process from pyruvate","synonyms":[{"name":"D(-)-lactate anabolism from pyruvate","type":"exact"},{"name":"D(-)-lactate formation from pyruvate","type":"exact"},{"name":"D(-)-lactate synthesis from pyruvate","type":"exact"}],"termid":"GO:0019245"}


id: PBO:0057225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 381","termid":"PBO:0057225"}


id: MOD:00669
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a octanoyloxy group.","definition_xrefs":["Unimod:426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanoylated residue","termid":"MOD:00666"},{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-octanoylated residue","synonyms":[{"name":"OOctRes","type":"exact"},{"name":"Octanoyl","type":"related"},{"name":"octanoyl","type":"related"}],"termid":"MOD:00669"}


id: SO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory element that acts in response to a stimulus, usually via transcription factor binding.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"response_element","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:response_element","type":"exact"},{"name":"response element","type":"exact"}],"termid":"SO:0002205"}


id: MONDO:1010776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus, non-human animal","termid":"MONDO:1010138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pemphigus, goat","secondary_identifiers":["OMIA:001188-9925"],"termid":"MONDO:1010776","xrefs":{"Monarch":{"xref_id":"1010776"}}}


id: PBO:0000014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stabilizes","termid":"PBO:0000014"}


id: PR:G2TRM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.17 gene.","definition_xrefs":["UniProtKB:G2TRM9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.17","synonyms":[{"name":"Spom972h-SPAC4H3.17","type":"exact"}],"termid":"PR:G2TRM9"}


id: GO:0009023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-cysteine + activated-tRNA = L-serine + tRNA containing a thionucleotide.","definition_xrefs":["GOC:go_curators","EC:2.8.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA sulfurtransferase (obsolete GO:0009023)","synonyms":[{"name":"tRNA sulfurtransferase","type":"exact"},{"name":"tRNA sulphurtransferase activity","type":"exact"}],"termid":"GO:0009023"}


id: GO:0004450
data:
  {"annotated_genes":["SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75609],"is_not":false,"summary":null,"term":"GO:0004450"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH.","definition_xrefs":["RHEA:19629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isocitrate dehydrogenase [NAD(P)+] activity","termid":"GO:0004448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"isocitrate dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-450984","MetaCyc:ISOCITDEH-RXN","Reactome:R-HSA-389540","Reactome:R-HSA-389550","EC:1.1.1.42"],"synonyms":[{"name":"NADP isocitric dehydrogenase activity","type":"exact"},{"name":"NADP(+)-ICDH activity","type":"related"},{"name":"NADP(+)-IDH activity","type":"related"},{"name":"NADP(+)-linked isocitrate dehydrogenase activity","type":"exact"},{"name":"NADP-dependent isocitrate dehydrogenase activity","type":"exact"},{"name":"NADP-dependent isocitric dehydrogenase activity","type":"exact"},{"name":"NADP-linked isocitrate dehydrogenase activity","type":"exact"},{"name":"NADP-specific isocitrate dehydrogenase activity","type":"exact"},{"name":"dual-cofactor-specific isocitrate dehydrogenase activity","type":"related"},{"name":"isocitrate (NADP) dehydrogenase activity","type":"exact"},{"name":"isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"exact"},{"name":"isocitrate dehydrogenase (NADP) activity","type":"exact"},{"name":"isocitrate dehydrogenase (NADP-dependent) activity","type":"exact"},{"name":"isocitrate:NADP+ oxidoreductase (decarboxylating)","type":"exact"},{"name":"triphosphopyridine nucleotide-linked isocitrate dehydrogenase activity","type":"exact"}],"termid":"GO:0004450","terms_by_termid":{"GO:0004450":null}}


id: MONDO:0010482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked parkinsonism-spasticity syndrome is a rare genetic neurological disorder characterized by parkinsonian features (including resting or action tremor, cogwheel rigidity, hypomimia and bradykinesia) associated with variably penetrant spasticity, hyperactive deep tendon reflexes and Babinski sign.","definition_xrefs":["Orphanet:363654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"},{"relation_name":"is_a","term_name":"ATP6AP2-related disorder","termid":"MONDO:0100146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked parkinsonism-spasticity syndrome","secondary_identifiers":["GARD:17567","MEDGEN:813052","UMLS:C3806722","DOID:0112105","OMIM:300911"],"synonyms":[{"name":"PARKINSONISM with spasticity, X-linked","type":"related"},{"name":"Parkinsonism with spasticity, X-linked, X-linked recessive","type":"exact"},{"name":"XPDS","type":"exact"}],"termid":"MONDO:0010482","xrefs":{"Monarch":{"xref_id":"0010482"}}}


id: MONDO:0020036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare nervous system cancer.","gene_count":0,"genotype_count":0,"name":"obsolete rare nervous system tumor (obsolete MONDO:0020036)","secondary_identifiers":["Orphanet:98062"],"synonyms":[{"name":"nervous system rare tumor","type":"exact"},{"name":"rare nervous system cancer","type":"exact"},{"name":"rare nervous system neoplasm","type":"exact"}],"termid":"MONDO:0020036","xrefs":{"Monarch":{"xref_id":"0020036"}}}


id: MONDO:0005305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epistaxis (obsolete MONDO:0005305)","termid":"MONDO:0005305","xrefs":{"Monarch":{"xref_id":"0005305"}}}


id: PBO:0088615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor subunit Rrn11","termid":"PBO:0088615"}


id: MONDO:0003926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma that involves the pleura.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nerve schwannoma","termid":"MONDO:0004820"},{"relation_name":"is_a","term_name":"pleural neoplasm","termid":"MONDO:0021065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurilemmoma of the pleura","secondary_identifiers":["NCIT:C5418","UMLS:C1335435","DOID:6564","MEDGEN:233863"],"synonyms":[{"name":"neurilemmoma of pleura","type":"exact"},{"name":"pleura schwannoma","type":"exact"},{"name":"pleural neurilemmoma","type":"exact"},{"name":"pleural schwannoma","type":"exact"},{"name":"schwannoma of pleura","type":"exact"},{"name":"schwannoma of the pleura","type":"exact"}],"termid":"MONDO:0003926","xrefs":{"Monarch":{"xref_id":"0003926"}}}


id: MONDO:0002663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic mastocytosis (obsolete MONDO:0002663)","termid":"MONDO:0002663","xrefs":{"Monarch":{"xref_id":"0002663"}}}


id: PBO:0004105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit D (predicted)","termid":"PBO:0004105"}


id: PR:Q9UTJ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu1-1 gene.","definition_xrefs":["UniProtKB:Q9UTJ3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 1/2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.06","synonyms":[{"name":"Spom972h-meu1-1","type":"exact"}],"termid":"PR:Q9UTJ3"}


id: FYPO:0007146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abolished, and the protein is present in the cytoplasm instead, during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to nucleus, with protein mislocalized to cytoplasm, during meiotic cell cycle","synonyms":[{"name":"abolished protein localization in nucleus, with protein mislocalized to cytoplasm, during meiotic cell cycle","type":"exact"},{"name":"nuclear exclusion, with protein mislocalized to cytoplasm, during meiotic cell cycle","type":"related"},{"name":"nuclear protein exclusion, with protein mislocalized to cytoplasm, during meiotic cell cycle","type":"related"},{"name":"protein localization to nucleus abolished, with protein mislocalized to cytoplasm, during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007146"}


id: PBO:0086306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with homology to human PDCD5; PDCD5 is involved in programmed cell death; N-terminal region forms a conserved triple-helix bundle structure; overproduction suppresses lethality due to expression of the dominant PET9 allele AAC2-A128P; overexpression promotes H2O2-induced apoptosis; YMR074C is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0086306"}


id: MONDO:0009762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus, congenital, autosomal recessive","secondary_identifiers":["OMIM:257400","MESH:C564938","DOID:0111797","MEDGEN:462921","UMLS:C3151571"],"synonyms":[{"name":"Nystagmus, congenital motor, autosomal recessive","type":"related"},{"name":"nystagmus, congenital, autosomal recessive","type":"exact"}],"termid":"MONDO:0009762","xrefs":{"Monarch":{"xref_id":"0009762"}}}


id: GO:0046888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"hormone secretion","termid":"GO:0046879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of hormone secretion","synonyms":[{"name":"down regulation of hormone secretion","type":"exact"},{"name":"down-regulation of hormone secretion","type":"exact"},{"name":"downregulation of hormone secretion","type":"exact"},{"name":"inhibition of hormone secretion","type":"narrow"}],"termid":"GO:0046888"}


id: PBO:0109106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial UbiB/ABC kinase -like family family membrane protein contact site protein Cqd1","termid":"PBO:0109106"}


id: GO:0033626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation by cell surface receptor linked signal transduction. This can occur by increased affinity of an integrin for its extracellular ligands.","definition_xrefs":["PMID:14754902","PMID:12213832","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"positive regulation of integrin activation","termid":"GO:0033625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0023052","GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of integrin activation by cell surface receptor linked signal transduction","synonyms":[{"name":"cell surface receptor linked signal transduction leading to integrin activation","type":"exact"},{"name":"cell surface receptor linked signal transduction leading to integrin complex activation","type":"exact"}],"termid":"GO:0033626"}


id: PBO:0017530
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of Sporulation Abnormal mutant","termid":"PBO:0017530"}


id: PBO:0003769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3g","termid":"PBO:0003769"}


id: PBO:0052533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 6","termid":"PBO:0052533"}


id: PBO:0084548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the quinone oxidoreductase family; up-regulated in response to the fungicide mancozeb; possibly up-regulated by iodine","termid":"PBO:0084548"}


id: GO:0044460
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a flagellum, a long whiplike or feathery structure borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellum part (obsolete GO:0044460)","synonyms":[{"name":"flagellum component","type":"exact"},{"name":"flagellum part","type":"exact"}],"termid":"GO:0044460"}


id: GO:0014861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by depolarization of muscle membrane and ionic fluxes.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"regulation of skeletal muscle contraction by action potential","termid":"GO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction via regulation of action potential","synonyms":[{"name":"regulation of skeletal muscle contraction via membrane action potential","type":"related"}],"termid":"GO:0014861"}


id: PBO:0063797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate dehydrogenase","termid":"PBO:0063797"}


id: MONDO:0015442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary breast and ovarian cancer syndrome (obsolete MONDO:0015442)","termid":"MONDO:0015442","xrefs":{"Monarch":{"xref_id":"0015442"}}}


id: SO:0000966
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, circular DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"single_stranded_RNA_chromosome","termid":"SO:0000962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_single_stranded_RNA_chromosome","synonyms":[{"name":"circular single stranded RNA chromosome","type":"exact"}],"termid":"SO:0000966"}


id: PBO:0062851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTOA pseudogene 1","termid":"PBO:0062851"}


id: PR:O60103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase MARCH6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04016","PANTHER:PTHR13145:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD-associated E3 ubiquitin-protein ligase doa10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.07","secondary_identifiers":["UniProtKB:O60103"],"synonyms":[{"name":"Spom972h-MARCH6","type":"exact"}],"termid":"PR:O60103"}


id: GO:1905502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to acetyl-CoA, an acyl-CoA having acetyl as its S-acetyl component.","definition_xrefs":["GOC:bc","PMID:24927529","GOC:krc","GOC:PARL","GOC:TermGenie","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA binding","termid":"GO:0120227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"acetyl-CoA binding","synonyms":[{"name":"acetyl-coenzyme A binding","type":"exact"}],"termid":"GO:1905502"}


id: GO:0033563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone is directed to a specific target site along the dorsal-ventral body axis in response to a combination of attractive and repulsive cues. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral axon guidance","synonyms":[{"name":"dorsal-ventral axon guidance","type":"exact"},{"name":"dorsal/ventral axon pathfinding","type":"exact"},{"name":"dorsoventral axon guidance","type":"exact"}],"termid":"GO:0033563"}


