# terms

id: GO:0031828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2C serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 2C serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 2C receptor binding","type":"exact"},{"name":"type 2C serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031828"}


id: PBO:0013106
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"csx1-related protein 1","termid":"PBO:0013106"}


id: PBO:0088665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA type, iron-sensing Fep1","termid":"PBO:0088665"}


id: PBO:0067894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 196","termid":"PBO:0067894"}


id: PBO:0008042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Tma23 (predicted)","termid":"PBO:0008042"}


id: MONDO:0003344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemangioblastoma (obsolete MONDO:0003344)","termid":"MONDO:0003344","xrefs":{"Monarch":{"xref_id":"0003344"}}}


id: PBO:0054694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2103","termid":"PBO:0054694"}


id: GO:0005516
data:
  {"annotated_genes":["SJAG_03631","SJAG_02180","SJAG_02249","SJAG_01851","SJAG_02858","SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67426,70635,75029,76968,79190,81348],"is_not":false,"summary":null,"term":"GO:0005516"}]},"cv_name":"molecular_function","definition":"Binding to calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01851":null,"SJAG_02180":null,"SJAG_02249":null,"SJAG_02858":null,"SJAG_03631":null,"SJAG_04498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calmodulin binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-202110"],"termid":"GO:0005516","terms_by_termid":{"GO:0005516":null}}


id: MONDO:0010878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 6 (SPG6) is a form of hereditary spastic paraplegia which usually presents in late adolescence or early adulthood as a pure phenotype of lower limb spasticity with hyperreflexia and extensor plantar responses, as well as mild bladder disturbances and pes cavus. Rarely, it can present as a complex phenotype with additional manifestations including epilepsy, variable peripheral neuropathy and/or memory impairment.","definition_xrefs":["Orphanet:100988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 6","secondary_identifiers":["DOID:0110811","GARD:4928","OMIM:600363","SCTID:732949006","UMLS:C1838192","MEDGEN:324965","MESH:C536866"],"synonyms":[{"name":"FSP3","type":"exact"},{"name":"NIPA1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG6","type":"exact"},{"name":"autosomal dominant familial spastic paraplegia type 3","type":"exact"},{"name":"autosomal dominant spastic paraplegia 6","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 6","type":"exact"},{"name":"familial spastic paraplegia autosomal dominant 3","type":"related"},{"name":"familial spastic paraplegia, autosomal dominant, 3","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in NIPA1","type":"exact"},{"name":"hereditary spastic paraplegia type 6","type":"exact"},{"name":"spastic paraplegia 6","type":"related"},{"name":"spastic paraplegia 6, autosomal dominant","type":"related"}],"termid":"MONDO:0010878","xrefs":{"Monarch":{"xref_id":"0010878"}}}


id: PBO:0080466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle trafficking 1 pseudogene 2","termid":"PBO:0080466"}


id: PBO:0011498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly protein Mzm1","termid":"PBO:0011498"}


id: PBO:0071884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 22","termid":"PBO:0071884"}


id: PBO:0005016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-TEFb-cap methyltransferase Pcm1","termid":"PBO:0005016"}


id: MONDO:0006811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reduction of cerebrospinal fluid pressure characterized clinically by headache which is maximal in an upright posture and occasionally by an abducens nerve palsy (see abducens nerve diseases), neck stiffness, hearing loss (see deafness); nausea; and other symptoms. This condition may be spontaneous or secondary to spinal puncture; neurosurgical procedures; dehydration; uremia; trauma (see also craniocerebral trauma); and other processes. Chronic hypotension may be associated with subdural hematomas (see hematoma, subdural) or hygromas. (From Semin Neurol 1996 Mar;16(1):5-10; Adams et al., Principles of Neurology, 6th ed, pp637-8)","definition_xrefs":["MESH:D019585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracranial hypotension","secondary_identifiers":["DOID:4723","UMLS:C0524812","MedDRA:10049977","ICD9:349.89","MEDGEN:141851","SCTID:433691000124104","EFO:1000993","icd11.foundation:363695674"],"termid":"MONDO:0006811","xrefs":{"Monarch":{"xref_id":"0006811"}}}


id: GO:0031708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an endothelin B receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"endothelin B receptor binding","synonyms":[{"name":"endothelin B receptor ligand","type":"narrow"}],"termid":"GO:0031708"}


id: PBO:0116908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, UPF0643 family","termid":"PBO:0116908"}


id: GO:0102443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (2S)-2-hydroxycarboxylate + NAD+ = a 2-oxocarboxylate + NADH + H+.","definition_xrefs":["RHEA:34555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-2-hydroxycarboxylate dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.1.1.337","MetaCyc:RXN-13927"],"termid":"GO:0102443"}


id: PBO:0080682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAS/WASL interacting protein family member 2","termid":"PBO:0080682"}


id: PBO:0109191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh4","termid":"PBO:0109191"}


id: MONDO:0009147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive hypohidrotic ectodermal dysplasia","termid":"MONDO:0016619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 10B, hypohidrotic/hair/tooth type, autosomal recessive","secondary_identifiers":["DOID:0111665","GARD:15163","MEDGEN:854356","UMLS:C3887494","OMIM:224900"],"synonyms":[{"name":"ECTD10B","type":"related"},{"name":"ectodermal dysplasia 10B, hypohidrotic/hair/tooth type, autosomal recessive","type":"exact"},{"name":"ectodermal dysplasia, anhidrotic","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic","type":"related"}],"termid":"MONDO:0009147","xrefs":{"Monarch":{"xref_id":"0009147"}}}


id: MONDO:0011435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 2, primary, autosomal recessive, with or without cortical malformations","secondary_identifiers":["GARD:15366","UMLS:C1858535","DOID:0070293","OMIM:604317","MEDGEN:346929","MESH:C565794"],"synonyms":[{"name":"MCPH2","type":"related"},{"name":"microcephaly 2, primary, autosomal recessive, with or without cortical malformations","type":"exact"}],"termid":"MONDO:0011435","xrefs":{"Monarch":{"xref_id":"0011435"}}}


id: PBO:0018170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent DNA helicase Rhp26","termid":"PBO:0018170"}


id: GO:0034925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyrene + O2 + 2 H+ + 2 e- = pyrene-4,5-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrene 4,5-monooxygenase activity (obsolete GO:0034925)","termid":"GO:0034925"}


id: GO:0071589
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[71649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any pyridine nucleoside, one of a family of organic molecules consisting of a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyridine nucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyridine nucleoside anabolism","type":"exact"},{"name":"pyridine nucleoside biosynthesis","type":"exact"},{"name":"pyridine nucleoside formation","type":"exact"},{"name":"pyridine nucleoside synthesis","type":"exact"}],"termid":"GO:0071589","terms_by_termid":{"GO:0071590":null,"GO:0071592":null}}


id: GO:0031705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a bombesin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"bombesin receptor binding","synonyms":[{"name":"bombesin receptor ligand","type":"narrow"}],"termid":"GO:0031705"}


id: PBO:0057861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3171 host gene","termid":"PBO:0057861"}


id: PBO:0003321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad22 homolog Rti1","termid":"PBO:0003321"}


id: GO:0160076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of non-canonical inflammasome complex assembly.","definition_xrefs":["PMID:26375259","PMID:22002608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"negatively_regulates","term_name":"non-canonical inflammasome complex assembly","termid":"GO:0160075"},{"relation_name":"part_of","term_name":"negative regulation of inflammasome-mediated signaling pathway","termid":"GO:0141086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of non-canonical inflammasome complex assembly","termid":"GO:0160076"}


id: GO:0075198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont haustorium neck formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"regulates","term_name":"haustorium neck formation","termid":"GO:0075197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of symbiont haustorium neck formation for entry into host","termid":"GO:0075198"}


id: MONDO:0020235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lens size anomaly (obsolete MONDO:0020235)","secondary_identifiers":["Orphanet:98652"],"termid":"MONDO:0020235","xrefs":{"Monarch":{"xref_id":"0020235"}}}


id: MONDO:0019527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disorder which does not meet classification criteria used to establish the presence of other well-defined connective tissue diseases.","definition_xrefs":["NCIT:C116776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"undifferentiated connective tissue syndrome","secondary_identifiers":["GARD:19097","MEDGEN:592754","Orphanet:90002","SCTID:239918008","MedDRA:10071575","UMLS:C0409999"],"synonyms":[{"name":"UCTD","type":"exact"},{"name":"undifferentiated connective tissue disease","type":"exact"}],"termid":"MONDO:0019527","xrefs":{"Monarch":{"xref_id":"0019527"}}}


id: GO:0016933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when glycine is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"extracellularly glycine-gated ion channel activity","synonyms":[{"name":"extracellular-glycine-gated ion channel activity","type":"exact"},{"name":"glycine receptor","type":"broad"}],"termid":"GO:0016933"}


id: PBO:0117437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein, implicated in transmembrane trasnsport or organelle fission","termid":"PBO:0117437"}


id: GO:1901328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytochalasin B stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cytochalasin B","termid":"GO:1901328"}


id: GO:0045299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The precipitation of specific crystal forms of calcium carbonate with extracellular matrix proteins in the otolith organs of the vertebrate inner ear.","definition_xrefs":["GOC:dsf","PMID:15581873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"},{"relation_name":"part_of","term_name":"otolith development","termid":"GO:0048840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otolith mineralization","termid":"GO:0045299"}


id: GO:0102636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine = 3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine + 2 5-oxo-L-prolinate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine gamma-glutamylcyclotransferase activity (obsolete GO:0102636)","termid":"GO:0102636"}


id: FYPO:0009063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to X-rays.","direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to ionizing radiation during vegetative growth","termid":"FYPO:0000267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to X-rays during vegetative growth","synonyms":[{"name":"decreased vegetative cell population growth during cellular response to X rays","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to X-rays","type":"exact"},{"name":"sensitive to X rays during vegetative growth","type":"exact"}],"termid":"FYPO:0009063"}


id: PBO:0057422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548x","termid":"PBO:0057422"}


id: PBO:0028891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_transcribed_regions_during_vegetative_growth","termid":"PBO:0028891"}


id: GO:0016166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the dehydrogenation of phytoene to produce a carotenoid intermediate such as phytofluene.","definition_xrefs":["PMID:29176862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phytoene dehydrogenase activity","termid":"GO:0016166"}


id: GO:0033355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cyclic series of interconversions involving L-ascorbate and glutathione that scavenges hydrogen peroxide and reduces it to water, with concomitant oxidation of NADPH.","definition_xrefs":["GOC:mah","MetaCyc:PWY-2261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione metabolic process","termid":"GO:0006749"},{"relation_name":"is_a","term_name":"L-ascorbic acid metabolic process","termid":"GO:0019852"},{"relation_name":"is_a","term_name":"hydrogen peroxide catabolic process","termid":"GO:0042744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150","GO:0006790","GO:0006766"],"is_obsolete":false,"name":"ascorbate glutathione cycle","synonyms":[{"name":"hydrogen peroxide detoxification","type":"related"}],"termid":"GO:0033355"}


id: PBO:0056708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of cell motility 1","termid":"PBO:0056708"}


id: GO:1990196
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The MacAB-TolC complex is a macrolide transporter complex found in E.coli and related gram-negative bacteria. Its transport activity is specific to macrolide compounds containing 14- and 15-membered lactones. It consists of the dimeric inner membrane ATPase MacB, the hexameric, periplasmic membrane fusion protein MacA and the trimeric outer membrane factor TolC.","definition_xrefs":["PMID:18955484","PMID:19254725","PMID:10879525","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide transmembrane transporter complex","termid":"GO:1990195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MacAB-TolC complex","synonyms":[{"name":"macrolide transporter MacAB-TolC complex","type":"exact"}],"termid":"GO:1990196"}


id: MONDO:0958018
data:
  {"annotated_genes":["SJAG_03144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87911],"is_not":false,"summary":null,"term":"MONDO:0958018"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"POLR-related leukodystrophy","termid":"MONDO:0100605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03144":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 27","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620675","UMLS:C5882743","MEDGEN:1844996"],"termid":"MONDO:0958018","terms_by_termid":{"MONDO:0958018":null},"xrefs":{"Monarch":{"xref_id":"0958018"}}}


id: MONDO:0006901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the peritoneal cavity. Representative examples of benign neoplasms include adenomatoid tumor and disseminated peritoneal leiomyomatosis. Representative examples of malignant neoplasms include primary peritoneal carcinoma, metastatic carcinoma to the peritoneum, and malignant mesothelioma.","definition_xrefs":["NCIT:C3322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peritoneal neoplasm","secondary_identifiers":["MEDGEN:18392","MESH:D010534","UMLS:C0031149","MedDRA:10061344","SCTID:126865007","EFO:1001100"],"synonyms":[{"name":"neoplasm of peritoneum","type":"exact"},{"name":"peritoneal neoplasm","type":"exact"},{"name":"peritoneum neoplasm","type":"exact"},{"name":"peritoneum neoplasm (disease)","type":"exact"},{"name":"peritoneum tumor","type":"exact"},{"name":"peritoneum tumour","type":"exact"},{"name":"tumor of peritoneum","type":"exact"},{"name":"tumour of peritoneum","type":"exact"}],"termid":"MONDO:0006901","xrefs":{"Monarch":{"xref_id":"0006901"}}}


id: MONDO:0004874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ganglion or cyst of synovium/tendon/bursa","secondary_identifiers":["UMLS:C0349693","ICD9:727.49","MEDGEN:578881","DOID:9754"],"termid":"MONDO:0004874","xrefs":{"Monarch":{"xref_id":"0004874"}}}


id: PBO:0046165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 3","termid":"PBO:0046165"}


id: FYPO:0007625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which does not contain a detectable mitochondrial respiratory chain complex III.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex III absent from cell","synonyms":[{"name":"absent respiratory complex III","type":"exact"},{"name":"mitochondrial respiratory chain complex III absent from cell during mitotic cell cycle","type":"related"},{"name":"mitochondrial respiratory chain complex III absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0007625"}


id: GO:1900325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltotriulose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of maltotriulose transport","termid":"GO:1900324"},{"relation_name":"negatively_regulates","term_name":"maltotriulose transport","termid":"GO:2001090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of maltotriulose transport","synonyms":[{"name":"down regulation of maltotriulose transport","type":"exact"},{"name":"down-regulation of maltotriulose transport","type":"exact"},{"name":"downregulation of maltotriulose transport","type":"exact"},{"name":"inhibition of maltotriulose transport","type":"narrow"}],"termid":"GO:1900325"}


id: FYPO:0001237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cadmium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on cadmium","synonyms":[{"name":"normal cell population growth in presence of cadmium","type":"exact"},{"name":"normal cell population growth on cadmium","type":"exact"},{"name":"normal cell population growth on cadmium ion","type":"exact"},{"name":"normal cellular response to cadmium","type":"related"},{"name":"normal growth on cadmium ions","type":"exact"},{"name":"normal vegetative cell population growth on cadmium","type":"exact"}],"termid":"FYPO:0001237"}


id: PBO:0040504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of transcription and developmental regulator AUTS2","termid":"PBO:0040504"}


id: MONDO:0044101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal pregnancy in which the conception is implanted and develops in the cornu of uterus.","definition_xrefs":["NCIT:C92761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectopic pregnancy","termid":"MONDO:0000755"},{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy, cornual","secondary_identifiers":["MESH:D065173","SCTID:87605005","UMLS:C0269286","MEDGEN:452359"],"synonyms":[{"name":"Pregnancies, cornual","type":"related"},{"name":"cornual Pregnancies","type":"related"},{"name":"cornual pregnancy","type":"exact"},{"name":"ectopic pregnancy of uterine horn","type":"exact"},{"name":"rudimentary horn pregnancy","type":"related"},{"name":"uterine horn ectopic pregnancy","type":"exact"}],"termid":"MONDO:0044101","xrefs":{"Monarch":{"xref_id":"0044101"}}}


id: GO:0106364
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61166],"is_not":false,"summary":null,"term":"GO:0106364"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-3-all-trans-polyprenylbenzoate + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = 3,4-dihydroxy-5-all-trans-polyprenylbenzoate + H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["PMID:38425362","RHEA:81195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"4-hydroxy-3-all-trans-hexaprenylbenzoate oxygenase activity","type":"narrow"}],"termid":"GO:0106364","terms_by_termid":{"GO:0106364":null}}


id: GO:1905774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP-dependent DNA helicase activity.","definition_xrefs":["GOC:rb","PMID:19734539","PMID:13679365","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA helicase activity (obsolete GO:1905774)","synonyms":[{"name":"regulation of ATP-dependent DNA helicase activity","type":"exact"}],"termid":"GO:1905774"}


id: MONDO:0010122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital thrombotic thrombocytopenic purpura is the hereditary form of thrombotic thrombocytopenic purpura (TTP) characterized by profound peripheral thrombocytopenia, microangiopathic hemolytic anemia (MAHA) and single or multiple organ failure of variable severity.","definition_xrefs":["Orphanet:93583"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"thrombotic thrombocytopenic purpura","termid":"MONDO:0018896"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"},{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"congenital thrombotic thrombocytopenic purpura","secondary_identifiers":["GARD:9430","SCTID:373420004","NANDO:1200317","MEDGEN:224783","ICD9:287.33","UMLS:C1268935","ICD10CM:M31.3","NCIT:C131657","OMIM:274150"],"synonyms":[{"name":"Microangiopathic hemolytic Anaemia","type":"related"},{"name":"Microangiopathic hemolytic Anemia","type":"related"},{"name":"Microangiopathic hemolytic Anemia, congenital","type":"related"},{"name":"Schulman-Upshaw syndrome","type":"related"},{"name":"TTP","type":"related"},{"name":"TTP, congenital","type":"related"},{"name":"USS","type":"related"},{"name":"Upshaw Factor, deficiency of","type":"related"},{"name":"Upshaw-Schulman syndrome","type":"exact"},{"name":"congenital ADAMTS-13 deficiency","type":"exact"},{"name":"congenital ADAMTS13 deficiency","type":"exact"},{"name":"congenital TTP","type":"exact"},{"name":"congenital thrombotic thrombocytopenic purpura","type":"exact"},{"name":"familial TTP","type":"exact"},{"name":"hereditary thrombotic thrombocytopenic purpura","type":"exact"},{"name":"thrombotic microangiopathy, familial","type":"related"},{"name":"thrombotic thrombocytopenic purpura, congenital","type":"related"},{"name":"thrombotic thrombocytopenic purpura, familial","type":"related"},{"name":"thrombotic thrombocytopenic purpura, hereditary","type":"exact"}],"termid":"MONDO:0010122","xrefs":{"Monarch":{"xref_id":"0010122"}}}


id: MONDO:0019569
data:
  {"annotated_genes":["SJAG_04540"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87852],"is_not":false,"summary":null,"term":"MONDO:0019569"}]},"cv_name":"mondo","definition":"Cockayne syndrome caused by mutation(s) in the ERCC8 gene, encoding DNA excision repair protein ERCC-8.","definition_xrefs":["NCIT:C135725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cockayne syndrome","termid":"MONDO:0016006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0006025","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"Cockayne syndrome type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:155488","UMLS:C0751039","Orphanet:90321","OMIM:216400","DOID:0080907","GARD:1415","icd11.foundation:1271368066"],"synonyms":[{"name":"CSA","type":"related"},{"name":"Cockayne syndrome A","type":"exact"},{"name":"Cockayne syndrome caused by mutation in ERCC8","type":"exact"},{"name":"Cockayne syndrome classic form","type":"related"},{"name":"Cockayne syndrome classical","type":"related"},{"name":"Cockayne syndrome type 1","type":"exact"},{"name":"Cockayne syndrome type A","type":"related"},{"name":"Cockayne syndrome type I","type":"exact"},{"name":"Cockayne syndrome type a","type":"exact"},{"name":"Cockayne syndrome, type A","type":"exact"},{"name":"ERCC8 Cockayne syndrome","type":"exact"}],"termid":"MONDO:0019569","terms_by_termid":{"MONDO:0019569":null},"xrefs":{"Monarch":{"xref_id":"0019569"}}}


id: GO:1904659
data:
  {"annotated_genes":["SJAG_00057","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112601,116152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[119202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"}]},"cv_name":"biological_process","definition":"The process in which D-glucose is transported across a membrane.","definition_xrefs":["PMID:9090050","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"D-glucose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015758"],"synonyms":[{"name":"glucose transmembrane transport","type":"exact"},{"name":"glucose transport","type":"related"}],"termid":"GO:1904659","terms_by_termid":{"GO:0046323":null,"GO:0098708":null}}


id: PBO:0070867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14 pseudogene 5","termid":"PBO:0070867"}


id: PBO:0086749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted to contain a transmembrane domain; not an essential gene; YNL095C has a paralog, ECM3, that arose from the whole genome duplication","termid":"PBO:0086749"}


id: PBO:0044868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND2B antisense RNA 1","termid":"PBO:0044868"}


id: PBO:0051811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-triphosphate receptor associated 1","termid":"PBO:0051811"}


id: MOD:01467
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:302#K","PubMed:15939799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menadione quinone derivative","termid":"MOD:00621"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"menadione quinone derivative - site K","synonyms":[{"name":"Menadione","type":"related"},{"name":"Menadione quinone derivative","type":"related"}],"termid":"MOD:01467"}


id: PBO:0064248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D family member 6","termid":"PBO:0064248"}


id: PBO:0073342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 4","termid":"PBO:0073342"}


id: PBO:0070633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 4","termid":"PBO:0070633"}


id: PBO:0085681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteasomal and 40S ribosomal subunit biogenesis; required for cleavage of the 20S pre-rRNA to generate the mature 18S rRNA; cleavage is activated by Fun12p, a GTPase and translation initiation factor; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0085681"}


id: GO:0097498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any endothelial tube morphogenesis process by which the tube is increased in length.","definition_xrefs":["GOC:dgh","PMID:23698350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial tube lumen extension","termid":"GO:0097498"}


id: PBO:0050709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 7","termid":"PBO:0050709"}


id: MONDO:0033009
data:
  {"annotated_genes":["SJAG_04201"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87044],"is_not":false,"summary":null,"term":"MONDO:0033009"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04201":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080247","MEDGEN:1617227","GARD:16249","OMIM:617731","UMLS:C4540274"],"synonyms":[{"name":"GAMOS5","type":"related"},{"name":"Galloway-Mowat syndrome 5","type":"exact"}],"termid":"MONDO:0033009","terms_by_termid":{"MONDO:0033009":null},"xrefs":{"Monarch":{"xref_id":"0033009"}}}


id: PBO:0041877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"castor zinc finger 1","termid":"PBO:0041877"}


id: PBO:0039272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase","termid":"PBO:0039272"}


id: GO:0070313
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of RGS6, a negative regulator of heterotrimeric G protein signaling, with the DMAP1-Dnmt1 transcriptional repressor complex; in the complex, RGS6 inhibits the transcriptional repressor activity of DMAP1.","definition_xrefs":["GOC:mah","PMID:14734556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RGS6-DNMT1-DMAP1 complex","termid":"GO:0070313"}


id: PR:O60086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ilv6 gene.","definition_xrefs":["UniProtKB:O60086","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetolactate synthase small subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.04","synonyms":[{"name":"AHAS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ALS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ilv6","type":"exact"},{"name":"acetohydroxy-acid synthase small subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60086"}


id: MONDO:1010041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meckel diverticulum that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel diverticulum, non-human animal","secondary_identifiers":["OMIA:001217"],"termid":"MONDO:1010041","xrefs":{"Monarch":{"xref_id":"1010041"}}}


id: PBO:0031061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination","termid":"PBO:0031061"}


id: PBO:0082028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase; involved with Gas2p in spore wall assembly; has similarity to Gas1p; localizes to the cell wall","termid":"PBO:0082028"}


id: MONDO:0011036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Porencephaly-cerebellar hypoplasia-internal malformations syndrome is rare central nervous system malformation syndrome characterized by bilateral porencephaly, absence of the septum pellucidum and cerebellar hypoplasia with absent vermis. Additionally, dysmorphic facial features (hypertelorism, epicanthic folds, high arched palate, prominent metopic suture), macrocephaly, corneal clouding, situs inversus, tetralogy of Fallot, atrial septal defects and/or seizures have been observed.","definition_xrefs":["Orphanet:2941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porencephaly-cerebellar hypoplasia-internal malformations syndrome","secondary_identifiers":["MEDGEN:331296","GARD:4437","MESH:C536336","UMLS:C1832472","SCTID:763821001","OMIM:601322"],"synonyms":[{"name":"Bonnemann Meinecke syndrome","type":"related"},{"name":"Bonnemann-Meinecke syndrome","type":"exact"},{"name":"porencephaly cerebellar hypoplasia internal malformations","type":"related"},{"name":"porencephaly, cerebellar hypoplasia, and internal malformations","type":"related"}],"termid":"MONDO:0011036","xrefs":{"Monarch":{"xref_id":"0011036"}}}


id: PBO:0051500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 23","termid":"PBO:0051500"}


id: GO:0015601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["EC:3.6.3.21","TC:3.A.1.3.10"],"gene_count":0,"genotype_count":0,"name":"obsolete cystine/diaminopimelate porter activity (obsolete GO:0015601)","synonyms":[{"name":"cystine/diaminopimelate porter activity","type":"exact"}],"termid":"GO:0015601"}


id: PR:O14114
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abo1 gene.","definition_xrefs":["UniProtKB:O14114","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C31G5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.19","synonyms":[{"name":"Spom972h-abo1","type":"exact"}],"termid":"PR:O14114"}


id: PR:O42847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 8A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C23A1.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.09","secondary_identifiers":["UniProtKB:O42847"],"synonyms":[{"name":"Spom972h-RBM8A","type":"exact"}],"termid":"PR:O42847"}


id: GO:0047687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-ascorbate + H2O + O2 = L-threonate + 2 H+ + oxalate.","definition_xrefs":["EC:1.13.11.13"],"gene_count":0,"genotype_count":0,"name":"obsolete ascorbate 2,3-dioxygenase activity (obsolete GO:0047687)","synonyms":[{"name":"AAoxygenase activity","type":"exact"},{"name":"ascorbate 2,3-dioxygenase activity","type":"exact"},{"name":"ascorbate:oxygen 2,3-oxidoreductase (bond-cleaving)","type":"exact"}],"termid":"GO:0047687"}


id: PBO:0055077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2494","termid":"PBO:0055077"}


id: PBO:0059911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 34","termid":"PBO:0059911"}


id: PBO:0016934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium transport regulatory factor (predicted)","termid":"PBO:0016934"}


id: PBO:0074391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 2","termid":"PBO:0074391"}


id: PBO:0041587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 2","termid":"PBO:0041587"}


id: GO:0080001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which seed mucilage expands through hydration and breaks the outer cell wall that encapsulates the whole seed upon imbibition. Mucilage, mainly composed of pectins, is formed during seed development and deposited into the apoplast underneath the outer wall of the seed coat.","definition_xrefs":["PMID:18266922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"seed germination","termid":"GO:0009845"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage extrusion from seed coat","synonyms":[{"name":"mucilage release from seed coat","type":"related"},{"name":"secretion of mucilage from seed coat","type":"related"}],"termid":"GO:0080001"}


id: MONDO:0015453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cogan syndrome (CS) is a rare autoimmune disorder of unknown origin characterized by inflammatory ocular disease (mainly interstitial keratitis) and vestibulo-auditory manifestations (mainly acute onset hearing loss, tinnitus and vertigo), in the setting of a negative work-up for syphilis, with a variable risk of developing into a systemic disease. Systemic manifestations may occur in more than 70% of cases.","definition_xrefs":["Orphanet:1467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease of ear, nose and throat","termid":"MONDO:0000587"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"Cogan syndrome","secondary_identifiers":["UMLS:C0271270","MedDRA:10056667","SCTID:405810005","DOID:0060216","MEDGEN:82871","GARD:1421","icd11.foundation:2098089327","MESH:D055952"],"synonyms":[{"name":"Cogan syndrome","type":"exact"},{"name":"Cogan's syndrome","type":"exact"},{"name":"diffuse interstitual keratitis","type":"exact"}],"termid":"MONDO:0015453","xrefs":{"Monarch":{"xref_id":"0015453"}}}


id: GO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response to protect an organism from a directly detected or perceived external threat from an insect or insects to that organism.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to insect","secondary_identifiers":["GO:0002214"],"synonyms":[{"name":"physiological defense response to insect","type":"exact"}],"termid":"GO:0002213"}


id: PBO:0017816
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Familial Kufor-Rakeb Syndrome","termid":"PBO:0017816"}


id: PBO:0056093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYN proto-oncogene, Src family tyrosine kinase","termid":"PBO:0056093"}


id: PBO:0119645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease MRP subunit p64","termid":"PBO:0119645"}


id: GO:0001799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type IIb hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type II hypersensitivity","termid":"GO:0002892"},{"relation_name":"regulates","term_name":"type IIb hypersensitivity","termid":"GO:0001795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type IIb hypersensitivity","termid":"GO:0001799"}


id: GO:0009134
data:
  {"annotated_genes":["SJAG_02009","SJAG_03903","SJAG_04048","SJAG_05314","SJAG_02785","SJAG_04334","SJAG_00605","SJAG_02135","SJAG_03977","SJAG_00685","SJAG_02369","SJAG_00027","SJAG_04192","SJAG_03828","SJAG_02107","SJAG_03676","SJAG_04495","SJAG_02945","SJAG_00461","SJAG_06622","SJAG_06621","SJAG_02796","SJAG_00839","SJAG_03660","SJAG_01310","SJAG_03373","SJAG_01595"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72251],"is_not":false,"summary":null,"term":"GO:0009134"},{"annotations":[111346,107745,118333,107374,100139,107375,99868,79614,96380,107376,111340,111341,111343,105284,74188,105543,107746,111342,111344,111345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[90422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[77909,74840],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[71751],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[115283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009191"},{"annotations":[78222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_01595":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"nucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside diphosphate breakdown","type":"exact"},{"name":"nucleoside diphosphate catabolism","type":"exact"},{"name":"nucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009134","terms_by_termid":{"GO:0006110":null,"GO:0006256":null,"GO:0009134":null,"GO:0009191":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: GO:0141034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that disrupts the host actin cytoskeleton by inhibiting host actin from polymerizing. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24253566","PMID:23409096","PMID:30297616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via inhibition of actin polymerization","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via inhibition of actin polymerization","type":"exact"}],"termid":"GO:0141034"}


id: GO:0007539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transmission of information about sexual status from the initial, general, determination to signals specific to the soma.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination","termid":"GO:0007538"},{"relation_name":"part_of","term_name":"somatic sex determination","termid":"GO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary sex determination, soma","termid":"GO:0007539"}


id: FYPO:0001036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is delaminated, i.e. one or more of its layers peels off.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology during vegetative growth","termid":"FYPO:0000351"},{"relation_name":"is_a","term_name":"delaminated cell wall","termid":"FYPO:0002948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002946","FYPO:0000002"],"is_obsolete":false,"name":"delaminated cell wall during vegetative growth","synonyms":[{"name":"delaminate cell wall during vegetative growth","type":"exact"},{"name":"delaminated cell wall during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001036"}


id: GO:0072156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a distal tubule are generated and organized. The distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tubule morphogenesis","termid":"GO:0072156"}


id: PBO:0079430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin epsilon 1","termid":"PBO:0079430"}


id: PBO:0078140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 19","termid":"PBO:0078140"}


id: MONDO:0016012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diethylstilbestrol (DES) syndrome is a malformation syndrome reported in offspring (children and grandchildren) of women exposed to DES during pregnancy and is characterized by reproductive tract malformations, decreased fertility and increased risk of developing clear cell carcinoma of the vagina and cervix in young women. Reproductive malformations reported in DES syndrome include small, T-shaped uteri and other uterotubal anomalies that increase the risk of miscarriages in women and epididymal cysts, microphallus, cryptorchidism, or testicular hypoplasia in men. DES, a synthetic nonsteroidal estrogen was widely prescribed from 1940-1970 to prevent miscarriage.","definition_xrefs":["Orphanet:1916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diethylstilbestrol syndrome","secondary_identifiers":["GARD:1859","icd11.foundation:1134098724","MEDGEN:799290","SCTID:716005004","NCIT:C113422","UMLS:C0853695","MedDRA:10012780"],"synonyms":[{"name":"DES embryofetopathy","type":"exact"},{"name":"DES syndrome","type":"exact"},{"name":"Distilbene embryofetopathy","type":"exact"},{"name":"antenatal diethylstilbestrol exposure","type":"related"},{"name":"diethylstilbestrol embryofetopathy","type":"exact"},{"name":"fetal diethylstilbestrol syndrome","type":"related"},{"name":"foetal diethylstilbestrol syndrome","type":"related"}],"termid":"MONDO:0016012","xrefs":{"Monarch":{"xref_id":"0016012"}}}


id: GO:0006011
data:
  {"annotated_genes":["SJAG_02178","SJAG_01089","SJAG_01209"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74309,81972,110848],"is_not":false,"summary":null,"term":"GO:0006011"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-alpha-D-glucose, a substance composed of alpha-D-glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_01209":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UDP-alpha-D-glucose metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"UDP-glucose metabolism","type":"exact"}],"termid":"GO:0006011","terms_by_termid":{"GO:0006011":null}}


id: GO:0031331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular catabolic process (obsolete GO:0031331)","synonyms":[{"name":"activation of cellular catabolic process","type":"narrow"},{"name":"positive regulation of cellular breakdown","type":"exact"},{"name":"positive regulation of cellular catabolism","type":"exact"},{"name":"positive regulation of cellular degradation","type":"exact"},{"name":"stimulation of cellular catabolic process","type":"narrow"},{"name":"up regulation of cellular catabolic process","type":"exact"},{"name":"up-regulation of cellular catabolic process","type":"exact"},{"name":"upregulation of cellular catabolic process","type":"exact"}],"termid":"GO:0031331"}


id: MONDO:0019396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare glomerular disease characterized by abnormal accumulation of type III collagen within the mesangium and subendothelial space of the glomerulus. Clinically it usually manifests with proteinuria (often in the nephrotic range), microscopic hematuria, peripheral edema and/or hypertension. In some cases progression to end-stage renal failure is observed.","definition_xrefs":["Orphanet:84087"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"glomerular disorder","termid":"MONDO:0019722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"collagen type III glomerulopathy","secondary_identifiers":["SCTID:708127008","ICD9:583.89","MEDGEN:836996","UMLS:C3872695","GARD:19048"],"synonyms":[{"name":"Collagenofibrotic glomerulopathy","type":"exact"}],"termid":"MONDO:0019396","xrefs":{"Monarch":{"xref_id":"0019396"}}}


id: PBO:0090205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body half bridge protein Sfi1","termid":"PBO:0090205"}


id: PBO:0075554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPEM family member 2","termid":"PBO:0075554"}


id: PBO:0054910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2324","termid":"PBO:0054910"}


id: PBO:0087464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of an alternative replication factor C complex; important for DNA replication and genome integrity; suppresses spontaneous DNA damage; involved in homologous recombination-mediated repair and telomere homeostasis; required for PCNA (Pol30p) unloading during DNA replication","termid":"PBO:0087464"}


id: PBO:0089351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoenolpyruvate transmembrane transporter Pet1","termid":"PBO:0089351"}


id: GO:0033295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroxyectoine.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"quaternary ammonium group binding","termid":"GO:0050997"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hydroxyectoine binding","termid":"GO:0033295"}


id: PBO:0034264
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_role","termid":"PBO:0034264"}


id: PBO:0085418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; confers resistance to short-chain monocarboxylic acids and quinidine; involved in the excretion of excess amino acids; AQR1 has a paralog, QDR1, that arose from the whole genome duplication; relocalizes from plasma membrane to cytoplasm upon DNA replication stress","termid":"PBO:0085418"}


id: PR:O74857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13408:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.07","secondary_identifiers":["UniProtKB:O74857"],"synonyms":[{"name":"RNA polymerase III subunit C4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C53 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC18.07","type":"related"},{"name":"Spom972h-POLR3D","type":"exact"},{"name":"rpc4","type":"related"}],"termid":"PR:O74857"}


id: MONDO:0014934
data:
  {"annotated_genes":["SJAG_02084"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88968],"is_not":false,"summary":null,"term":"MONDO:0014934"}]},"cv_name":"mondo","definition":"Any autosomal dominant cerebellar ataxia in which the cause of the disease is a mutation in the UBA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02084":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 24","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934666","DOID:0111615","OMIM:617133","UMLS:C4310699"],"synonyms":[{"name":"SCAR24","type":"exact"},{"name":"UBA5 autosomal dominant cerebellar ataxia","type":"exact"},{"name":"autosomal dominant cerebellar ataxia caused by mutation in UBA5","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 24","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 24; SCAR24","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive type 24","type":"exact"}],"termid":"MONDO:0014934","terms_by_termid":{"MONDO:0014934":null},"xrefs":{"Monarch":{"xref_id":"0014934"}}}


id: PBO:0045952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like domain multiple 8","termid":"PBO:0045952"}


id: GO:0061920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propionyl-CoA + lysine in peptide = CoA + N-propionyl-lysine-peptide.","definition_xrefs":["PMID:17267393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"protein propionyltransferase activity","secondary_identifiers":["RHEA:54020"],"termid":"GO:0061920"}


id: MONDO:0030512
data:
  {"annotated_genes":["SJAG_01854"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87900],"is_not":false,"summary":null,"term":"MONDO:0030512"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01854":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 85, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:631082","MEDGEN:1794263","DOID:0112345","UMLS:C5562053","OMIM:619686"],"synonyms":[{"name":"SPG85","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 85","type":"exact"}],"termid":"MONDO:0030512","terms_by_termid":{"MONDO:0030512":null},"xrefs":{"Monarch":{"xref_id":"0030512"}}}


id: PBO:0091377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 family heat shock protein Ssa1","termid":"PBO:0091377"}


id: GO:0102213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: coenzyme A + ATP + an in-chain hydroxy fatty acid = diphosphoric acid + AMP + a in-chain hydroxyacyl-CoA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete in-chain hydroxy fatty acyl-CoA synthetase activity (obsolete GO:0102213)","termid":"GO:0102213"}


id: PBO:0041562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 81","termid":"PBO:0041562"}


id: GO:0046630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a gamma-delta T cell population by cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"},{"relation_name":"is_a","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell proliferation","synonyms":[{"name":"gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"gamma-delta T-cell proliferation","type":"exact"},{"name":"gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046630"}


id: PBO:0086512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; deletion decreases transcription of downstream gene ALD6; YPL062W is not an essential gene; null mutant shows decrease in terpenoid production; homozygous diploid mutant shows a decrease in glycogen accumulation","termid":"PBO:0086512"}


id: PBO:0029482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell_population_(obsolete_FYPO:0002233)","termid":"PBO:0029482"}


id: PBO:0073957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 6","termid":"PBO:0073957"}


id: PATO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's having an onset and time course between acute and chronic.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute","termid":"PATO:0002091"}


id: PATO:0002385
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines, usually parallel, with at least one salient angle on the margin","definition_xrefs":["FNA:FNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated","termid":"PATO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striate-angular","termid":"PATO:0002385"}


id: MONDO:0005169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of neoplasms composed of T-lymphocytes with a mature (peripheral/post-thymic) immunophenotypic profile and/or NK-cells.","definition_xrefs":["NCIT:C27909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell and NK-cell neoplasm","termid":"MONDO:0024615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"neoplasm of mature T-cells or NK-cells","secondary_identifiers":["ONCOTREE:MTNN","EFO:0002426","MEDGEN:233675","UMLS:C1334640"],"synonyms":[{"name":"mature T and NK neoplasms","type":"exact"},{"name":"mature T-cell and NK-cell neoplasm","type":"exact"},{"name":"mature T-cell neoplasm","type":"exact"}],"termid":"MONDO:0005169","xrefs":{"Monarch":{"xref_id":"0005169"}}}


id: PBO:0046746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 3 like 1","termid":"PBO:0046746"}


id: MONDO:0008299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior column ataxia","secondary_identifiers":["OMIM:176250","MESH:C536342","MEDGEN:357379","UMLS:C1867923"],"synonyms":[{"name":"Biemond ataxia","type":"related"},{"name":"posterior column ataxia","type":"exact"}],"termid":"MONDO:0008299","xrefs":{"Monarch":{"xref_id":"0008299"}}}


id: GO:0032580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the thin, flattened compartments that form the central portion of the Golgi complex.","definition_xrefs":["GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"Golgi cisterna","termid":"GO:0031985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005794","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Golgi cisterna membrane","synonyms":[{"name":"Golgi apparatus cisterna membrane","type":"exact"},{"name":"Golgi stack membrane","type":"exact"}],"termid":"GO:0032580"}


id: PBO:0004945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine diphosphorylase Uap1/Qri1(predicted)","termid":"PBO:0004945"}


id: PBO:0042117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 188B, pseudogene","termid":"PBO:0042117"}


id: MONDO:0024334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"peripheral nerve lesion","secondary_identifiers":["MEDGEN:1843468","UMLS:C1963788"],"termid":"MONDO:0024334","xrefs":{"Monarch":{"xref_id":"0024334"}}}


id: PBO:0084656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor succinate dehydrogenase isozyme; participates in oxidation of succinate and transfer of electrons to ubiquinone; induced during the diauxic shift in a Cat8p-dependent manner; YJL045W has a paralog, SDH1, that arose from the whole genome duplication","termid":"PBO:0084656"}


id: FYPO:0001775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the eisosome filament is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abnormal protein localization to eisosome filament","termid":"FYPO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to eisosome filament","synonyms":[{"name":"abolished protein localisation to eisosome filament","type":"exact"},{"name":"abolished protein localization to eisosome filament during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to eisosome filament during vegetative growth","type":"exact"},{"name":"abolished protein localization to linear eisosome","type":"exact"},{"name":"protein localization to eisosome filament abolished","type":"exact"}],"termid":"FYPO:0001775"}


id: PBO:0081673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF594 divergent transcript","termid":"PBO:0081673"}


id: GO:0044092
data:
  {"annotated_genes":["SJAG_03088","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107071,97154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that stops or reduces the rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.","definition_xrefs":["GO:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of molecular function","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044092","terms_by_termid":{"GO:1904530":null}}


id: PBO:0074205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC39A13 antisense RNA 1","termid":"PBO:0074205"}


id: PR:000036979
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ras-like protein 1 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PMID:29453312","PomBase:MH","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ras-like protein 1 (Schizosaccharomyces pombe)","termid":"PR:000036978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras1/GTP+","pombase_gene_id":"SPAC17H9.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: ras-like protein 1, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ras1/GTP+","type":"exact"},{"name":"ras1/GTP+","type":"exact"}],"termid":"PR:000036979"}


id: GO:0090617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["PMID:25181358","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"mitochondrial mRNA 5'-end processing","termid":"GO:0090617"}


id: GO:0047286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptide diphthamide + NAD+ = peptide N-(ADP-D-ribosyl)diphthamide + niacinamide.","definition_xrefs":["EC:2.4.2.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"NAD+-diphthamide ADP-ribosyltransferase activity","secondary_identifiers":["RHEA:11820","Reactome:R-HSA-5336421","MetaCyc:RXN-11372"],"synonyms":[{"name":"ADP-ribosyltransferase activity","type":"broad"},{"name":"NAD+:peptide-diphthamide N-(ADP-D-ribosyl)transferase activity","type":"related"},{"name":"NAD-diphthamide ADP-ribosyltransferase activity","type":"exact"},{"name":"mono(ADP-ribosyl)transferase activity","type":"broad"}],"termid":"GO:0047286"}


id: PBO:0029212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dTTP_biosynthetic_process","termid":"PBO:0029212"}


id: PBO:0005744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf21","termid":"PBO:0005744"}


id: PBO:0062671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily Z member 2 pseudogene","termid":"PBO:0062671"}


id: GO:0140790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: histone serine phosphate + H2O = histone serine + phosphate, and histone threonine phosphate + H2O = histone threonine + phosphate.","definition_xrefs":["PMID:18614045"],"gene_count":0,"genotype_count":0,"name":"obsolete histone serine/threonine phosphatase activity (obsolete GO:0140790)","termid":"GO:0140790"}


id: PBO:0044319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1","termid":"PBO:0044319"}


id: GO:0031968
data:
  {"annotated_genes":["SJAG_03435","SJAG_04759","SJAG_04996","SJAG_03416","SJAG_00812","SJAG_00948","SJAG_01780","SJAG_05268","SJAG_00569","SJAG_03502","SJAG_00605","SJAG_00048","SJAG_02084","SJAG_01900","SJAG_05259","SJAG_02355","SJAG_01212","SJAG_03358","SJAG_03415","SJAG_03328","SJAG_00655","SJAG_00265","SJAG_04370","SJAG_01134","SJAG_01260","SJAG_02361","SJAG_04270","SJAG_02848","SJAG_00880","SJAG_00235","SJAG_02543","SJAG_00999","SJAG_04203","SJAG_03345","SJAG_01929","SJAG_00810","SJAG_01951","SJAG_02265","SJAG_00368","SJAG_00428","SJAG_03710","SJAG_03464","SJAG_01357","SJAG_03175","SJAG_04732","SJAG_01305","SJAG_00699","SJAG_04072","SJAG_02641","SJAG_00031","SJAG_03515","SJAG_01312","SJAG_00754"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91073,106729,117751],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036266"},{"annotations":[101133,107851,104402,103237,106375,107720,102414,108513,117752,119668,106730,91076],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032473"},{"annotations":[118598,71722,76529,71679,81866],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032865"},{"annotations":[109141],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031315"},{"annotations":[113752,112360],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140595"},{"annotations":[75321,90040,109639,93745,104661,93775,107913,106265,73436,74627,76445,104355,103361,72658,111235,120787,97957,119574,90867,106525,97302,74201,93986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005741"},{"annotations":[72220,108099,64843,101302,80938,80757],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005742"},{"annotations":[90339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005640"},{"annotations":[75133,62553,71678,92194],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001401"}]},"cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing in a cellular organelle, lipid bilayer of an organelle envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer membrane","termid":"GO:0019867"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"organelle envelope","termid":"GO:0031967"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00048":null,"SJAG_00235":null,"SJAG_00265":null,"SJAG_00368":null,"SJAG_00428":null,"SJAG_00569":null,"SJAG_00605":null,"SJAG_00655":null,"SJAG_00699":null,"SJAG_00754":null,"SJAG_00810":null,"SJAG_00812":null,"SJAG_00880":null,"SJAG_00948":null,"SJAG_00999":null,"SJAG_01134":null,"SJAG_01212":null,"SJAG_01260":null,"SJAG_01305":null,"SJAG_01312":null,"SJAG_01357":null,"SJAG_01780":null,"SJAG_01900":null,"SJAG_01929":null,"SJAG_01951":null,"SJAG_02084":null,"SJAG_02265":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02543":null,"SJAG_02641":null,"SJAG_02848":null,"SJAG_03175":null,"SJAG_03328":null,"SJAG_03345":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03435":null,"SJAG_03464":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03710":null,"SJAG_04072":null,"SJAG_04203":null,"SJAG_04270":null,"SJAG_04370":null,"SJAG_04732":null,"SJAG_04759":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organelle outer membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031968","terms_by_termid":{"GO:0001401":null,"GO:0005640":null,"GO:0005741":null,"GO:0005742":null,"GO:0031315":null,"GO:0032473":null,"GO:0032865":null,"GO:0036266":null,"GO:0140595":null}}


id: MONDO:0015494
data:
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id: PBO:0082566
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id: GO:0061565
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id: PBO:0091298
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id: GO:0003690
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id: GO:0010209
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id: GO:2000208
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id: PBO:0027238
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id: PBO:0034748
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id: GO:0099402
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id: PBO:0016521
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id: GO:0072704
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id: PBO:0029634
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id: PBO:0017034
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id: MONDO:0003177
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id: GO:0008804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + NH3 + CO2 = ADP + carbamoyl phosphate.","definition_xrefs":["EC:2.7.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"carbamate kinase activity","secondary_identifiers":["RHEA:10152","MetaCyc:CARBAMATE-KINASE-RXN"],"synonyms":[{"name":"ATP:carbamate phosphotransferase activity","type":"related"},{"name":"CKase activity","type":"related"},{"name":"carbamoyl phosphokinase activity","type":"related"},{"name":"carbamyl phosphokinase activity","type":"related"}],"termid":"GO:0008804"}


id: GO:0051186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor metabolic process (obsolete GO:0051186)","synonyms":[{"name":"cofactor metabolism","type":"exact"}],"termid":"GO:0051186"}


id: FYPO:0007314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 at the central core of the centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation at centromere during vegetative growth","termid":"FYPO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at centromeric central core during vegetative growth","type":"exact"},{"name":"increased histone H4K12 acetylation at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0007314"}


id: PBO:0074162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F5","termid":"PBO:0074162"}


id: GO:0075258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of teliospore formation, which is the formation of a thick-walled resting or overwintering spore produced by the rust fungi (Uredinales) and smut fungi (Ustilaginales) in which karyogamy occurs.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"},{"relation_name":"is_a","term_name":"regulation of teliospore formation","termid":"GO:0075256"},{"relation_name":"negatively_regulates","term_name":"teliospore formation","termid":"GO:0075255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of teliospore formation","termid":"GO:0075258"}


id: FYPO:0004885
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"}],"single_locus_phenotype":[{"annotations":[121262,121254,121264,121281,121283,121285,121255,121261,121265,121278,121282,121284,121280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[121258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear envelope is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":8,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild type"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cmp7delta vps4-ts(I307T L327S aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_05207","SJAG_03892"],"name":"abnormal protein localization to nuclear envelope during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_04489","SJAG_01050","SJAG_03783","SJAG_03892","SJAG_05207"],"single_locus_genotype_uniquenames":["vps4delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","did4delta","vps24delta","nur1delta","cmp7delta"],"synonyms":[{"name":"abnormal protein localisation to nuclear envelope during vegetative growth","type":"exact"},{"name":"abnormal protein localization to nuclear envelope during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004885","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007073":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0071330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 7","termid":"PBO:0071330"}


id: PBO:0016895
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae KNS1","termid":"PBO:0016895"}


id: GO:0100068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates pyrimidine-containing compound salvage.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pyrimidine-containing compound salvage by transcription from RNA polymerase II promoter (obsolete GO:0100068)","termid":"GO:0100068"}


id: GO:0050011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citramalyl-CoA = itaconyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.56","MetaCyc:ITACONYL-COA-HYDRATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"itaconyl-CoA hydratase activity","secondary_identifiers":["RHEA:13785"],"synonyms":[{"name":"citramalyl-CoA hydro-lyase (itaconyl-CoA-forming)","type":"related"},{"name":"citramalyl-CoA hydro-lyase activity","type":"related"},{"name":"itaconyl coenzyme A hydratase activity","type":"related"}],"termid":"GO:0050011"}


id: PBO:0070649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 20","termid":"PBO:0070649"}


id: PBO:0017586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, TPR lobe subcomplex subunit Cut9/Apc6","termid":"PBO:0017586"}


id: MONDO:0016924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 4 disorder","termid":"MONDO:0700011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 4","secondary_identifiers":["MEDGEN:1392317","GARD:20845","SCTID:726342002","Orphanet:262206","UMLS:C4518492"],"synonyms":[{"name":"partial duplication of chromosome type 4","type":"exact"},{"name":"partial trisomy of chromosome 4","type":"exact"}],"termid":"MONDO:0016924","xrefs":{"Monarch":{"xref_id":"0016924"}}}


id: MONDO:0006374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choriocarcinoma that develops in the placenta. It is the rarest form of gestational choriocarcinoma. Metastases to the mother and infant may occur.","definition_xrefs":["NCIT:C8893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta cancer","termid":"MONDO:0002178"},{"relation_name":"is_a","term_name":"gestational choriocarcinoma","termid":"MONDO:0020550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"placental choriocarcinoma","secondary_identifiers":["SCTID:448401007","EFO:1000479","DOID:2024","UMLS:C0855173","MEDGEN:167782"],"synonyms":[{"name":"choriocarcinoma of placenta","type":"related"},{"name":"choriocarcinoma of the placenta","type":"exact"},{"name":"placenta choriocarcinoma","type":"related"},{"name":"placenta choriocarcinoma (disease)","type":"exact"},{"name":"placental choriocarcinoma","type":"exact"}],"termid":"MONDO:0006374","xrefs":{"Monarch":{"xref_id":"0006374"}}}


id: PBO:0066139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB1 divergent transcript","termid":"PBO:0066139"}


id: GO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a long-chain fatty acid from one side of a membrane to the other. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transmembrane transporter activity","termid":"GO:0015245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"long-chain fatty acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-2046093","Reactome:R-HSA-382575","GO:0008562","GO:0005325","Reactome:R-HSA-5684043","Reactome:R-HSA-434381","Reactome:R-HSA-2046087","RHEA:39283"],"synonyms":[{"name":"long-chain fatty acid transporter activity","type":"related"}],"termid":"GO:0005324"}


id: MONDO:0006162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the colon or rectum. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C96160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"},{"relation_name":"is_a","term_name":"intestinal neuroendocrine tumor G1","termid":"MONDO:0021533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colorectal neuroendocrine tumor G1","secondary_identifiers":["EFO:1000195","MEDGEN:474244","UMLS:C3272611"],"synonyms":[{"name":"colorectal NET G1","type":"exact"},{"name":"colorectal carcinoid tumor","type":"exact"},{"name":"colorectal carcinoid tumour","type":"exact"},{"name":"colorectal neuroendocrine tumor G1","type":"exact"},{"name":"colorectum NET G1","type":"exact"},{"name":"colorectum carcinoid tumor","type":"exact"},{"name":"colorectum carcinoid tumour","type":"exact"},{"name":"colorectum neuroendocrine neoplasm G1","type":"exact"},{"name":"colorectum neuroendocrine tumor, well differentiated, low grade","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of colorectum","type":"exact"},{"name":"large intestinal neuroendocrine tumor G1","type":"exact"},{"name":"large intestinal neuroendocrine tumour G1","type":"exact"}],"termid":"MONDO:0006162","xrefs":{"Monarch":{"xref_id":"0006162"}}}


id: FYPO:0008127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype where a ribosome is mislocalized to the nucleoplasm in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"ribosome mislocalized to nucleoplasm","termid":"FYPO:0008127"}


id: PBO:0046580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 22","termid":"PBO:0046580"}


id: PR:O60141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 94 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03000","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein saf4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.10c","secondary_identifiers":["UniProtKB:O60141"],"synonyms":[{"name":"Spom972h-CCDC94","type":"exact"}],"termid":"PR:O60141"}


id: FYPO:0002827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased chromatin silencing at silent mating-type cassette","synonyms":[{"name":"decreased chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"decreased chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"reduced chromatin silencing at silent mating-type cassette","type":"exact"}],"termid":"FYPO:0002827"}


id: PR:Q12126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division protein kinase 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase crk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.07","secondary_identifiers":["UniProtKB:Q12126"],"synonyms":[{"name":"Spom972h-CDK7","type":"exact"},{"name":"mitotic catastrophe suppressor 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q12126"}


id: PR:G2TRN9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.11c gene.","definition_xrefs":["UniProtKB:G2TRN9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C11D3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.11c","synonyms":[{"name":"Spom972h-SPAC11D3.11c","type":"exact"}],"termid":"PR:G2TRN9"}


id: PBO:0048059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 8","termid":"PBO:0048059"}


id: SO:0001915
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region defined by a cluster of experimentally determined transcription starting sites.","definition_xrefs":["PMID:21372179","SO:andrewgibson","PMID:19624849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_start_cluster","synonyms":[{"name":"TSC","type":"exact"},{"name":"TSS cluster","type":"exact"},{"name":"transcriptional initiation cluster","type":"exact"},{"name":"transcriptional start site cluster","type":"exact"}],"termid":"SO:0001915"}


id: PBO:0081009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 45","termid":"PBO:0081009"}


id: GO:0070424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway (NLR) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","synonyms":[{"name":"regulation of NOD signaling pathway","type":"narrow"},{"name":"regulation of nucleotide-binding oligomerization domain containing signaling pathway","type":"narrow"},{"name":"regulation of nucleotide-binding oligomerization domain containing signalling pathway","type":"narrow"}],"termid":"GO:0070424"}


id: GO:0042104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"regulation of activated T cell proliferation","termid":"GO:0046006"},{"relation_name":"positively_regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of activated T cell proliferation","synonyms":[{"name":"activation of activated T cell proliferation","type":"narrow"},{"name":"positive regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of activated T-cell proliferation","type":"exact"},{"name":"positive regulation of activated T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of activated T cell proliferation","type":"narrow"},{"name":"up regulation of activated T cell proliferation","type":"exact"},{"name":"up-regulation of activated T cell proliferation","type":"exact"},{"name":"upregulation of activated T cell proliferation","type":"exact"}],"termid":"GO:0042104"}


id: MONDO:0010784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloramphenicol toxicity","secondary_identifiers":["MEDGEN:374104","OMIM:515000","UMLS:C1838989"],"synonyms":[{"name":"anemia, chloramphenicol-induced","type":"related"},{"name":"chloramphenicol resistance","type":"related"},{"name":"chloramphenicol toxicity","type":"exact"}],"termid":"MONDO:0010784","xrefs":{"Monarch":{"xref_id":"0010784"}}}


id: PBO:0003143
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.1","termid":"PBO:0003143"}


id: MONDO:0016698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade II, slow growing tumor of children and young adults, usually located intraventricularly. It is the most common ependymal neoplasm. It often causes clinical symptoms by blocking cerebrospinal fluid pathways. Key histological features include perivascular pseudorosettes and ependymal rosettes. (WHO)","definition_xrefs":["NCIT:C3017"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign glioma","termid":"MONDO:0000638"},{"relation_name":"excluded_subClassOf","term_name":"low grade ependymoma","termid":"MONDO:0016697"},{"relation_name":"is_a","term_name":"ependymal tumor","termid":"MONDO:0003266"},{"relation_name":"is_a","term_name":"grade II glioma","termid":"MONDO:0021639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ependymoma","secondary_identifiers":["MEDGEN:41825","EFO:1000028","GARD:6353","MESH:D004806","NANDO:2200088","Orphanet:251636","ONCOTREE:EPM","ICDO:9391/3","DOID:4844","UMLS:C0014474","MedDRA:10014967"],"synonyms":[{"name":"WHO grade II ependymal neoplasm","type":"narrow"},{"name":"WHO grade II ependymal tumor","type":"narrow"},{"name":"WHO grade II ependymal tumour","type":"narrow"},{"name":"benign ependymoma","type":"exact"},{"name":"clear cell ependymoma (histologic variant)","type":"related"},{"name":"ependymoma","type":"exact"},{"name":"ependymoma, benign","type":"narrow"},{"name":"ependymoma, familial","type":"related"},{"name":"epithelial ependymoma","type":"exact"},{"name":"papillary ependymoma (histologic variant)","type":"related"},{"name":"tanycytic ependymoma (histologic variant)","type":"related"}],"termid":"MONDO:0016698","xrefs":{"Monarch":{"xref_id":"0016698"}}}


id: GO:0071851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during G1 phase, as a result of deprivation of nitrogen.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:0071851)","synonyms":[{"name":"G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"}],"termid":"GO:0071851"}


id: FYPO:0002051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, elongated, has no septum, and contains more than one nucleus. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002049"},{"relation_name":"is_a","term_name":"swollen multinucleate vegetative cell","termid":"FYPO:0004257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000005"],"is_obsolete":false,"name":"swollen elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate vegetative cell with increased cell volume","type":"exact"},{"name":"enlarged elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"large elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"swollen elongated multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"swollen elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002051"}


id: PBO:0036075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036075"}


id: MONDO:0020499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nipah virus disease, caused by the Nipah virus, is a recently discovered zoonotic disease characterized by fever, constitutional symptoms and encephalitis, sometimes accompanied by respiratory illness.","definition_xrefs":["Orphanet:99825"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infectious encephalitis","termid":"MONDO:0020067"},{"relation_name":"is_a","term_name":"henipavirus infectious disease","termid":"MONDO:0005785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nipah virus disease","secondary_identifiers":["GARD:19689","MEDGEN:728863","DOID:0050192","UMLS:C1320202"],"synonyms":[{"name":"Nipah encephalitis","type":"exact"},{"name":"Nipah fever","type":"exact"},{"name":"Nipah virus infectious disease","type":"exact"}],"termid":"MONDO:0020499","xrefs":{"Monarch":{"xref_id":"0020499"}}}


id: PBO:0041479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 80","termid":"PBO:0041479"}


id: MONDO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete breast duct papilloma (obsolete MONDO:0002059)","termid":"MONDO:0002059","xrefs":{"Monarch":{"xref_id":"0002059"}}}


id: PBO:0076334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYT2 antisense RNA 1","termid":"PBO:0076334"}


id: PBO:0050165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 21","termid":"PBO:0050165"}


id: GO:0061056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"somite development","termid":"GO:0061053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sclerotome development","termid":"GO:0061056"}


id: MONDO:0009935
data:
  {"annotated_genes":["SJAG_03866","SJAG_04757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88448,88449],"is_not":false,"summary":null,"term":"MONDO:0009935"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary pulmonary hypertension","termid":"MONDO:0001999"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pulmonary hypertension, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1802382","OMIM:265400","UMLS:C5676877","MESH:C564862"],"synonyms":[{"name":"pulmonary hypertension, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0009935","terms_by_termid":{"MONDO:0009935":null},"xrefs":{"Monarch":{"xref_id":"0009935"}}}


id: PBO:0072690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX1 partner transcriptional co-repressor 1","termid":"PBO:0072690"}


id: PBO:0065625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 3","termid":"PBO:0065625"}


id: GO:0035459
data:
  {"annotated_genes":["SJAG_03558","SJAG_00072","SJAG_02349","SJAG_03153","SJAG_01381","SJAG_02539","SJAG_05344","SJAG_05345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035652"},{"annotations":[76599,76957,77405,78871,80243,73087,78295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090110"}]},"cv_name":"biological_process","definition":"The formation of a macromolecular complex between the coat proteins and proteins and/or lipoproteins that are going to be transported by a vesicle.","definition_xrefs":["GOC:bf","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_01381":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vesicle cargo loading","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cargo loading into vesicle","type":"exact"},{"name":"cargo selection","type":"exact"}],"termid":"GO:0035459","terms_by_termid":{"GO:0035652":null,"GO:0090110":null}}


id: GO:0102040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: fumarate + a menaquinol = succinate + a menaquinone.","definition_xrefs":["GOC:pz","PMID:11850430"],"gene_count":0,"genotype_count":0,"name":"obsolete fumarate reductase (menaquinone) (obsolete GO:0102040)","termid":"GO:0102040"}


id: PR:O13803
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 82 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17H9.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.06c","secondary_identifiers":["UniProtKB:O13803"],"synonyms":[{"name":"Spom972h-CCDC82","type":"exact"}],"termid":"PR:O13803"}


id: PBO:0089024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Alpha/Beta hydrolase fold, DUF726 family protein","termid":"PBO:0089024"}


id: PBO:0079763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin recognition factor in ER associated degradation 1","termid":"PBO:0079763"}


id: PBO:0073404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 7","termid":"PBO:0073404"}


id: PBO:0055188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2612","termid":"PBO:0055188"}


id: PBO:0073284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 5","termid":"PBO:0073284"}


id: GO:0008817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + 2 corrinoid + reduced [electron-transfer flavoprotein] = 2 adenosylcorrinoid + 3 H+ + oxidized [electron-transfer flavoprotein] + 2 triphosphate. The corrinoid can be cob(II)yrinate a,c diamide, cob(II)inamide or cob(II)alamin.","definition_xrefs":["PMID:19933577","PMID:5946606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"corrinoid adenosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05218","Reactome:R-HSA-3322125","GO:0043784","Reactome:R-HSA-3159253","EC:2.5.1.17"],"synonyms":[{"name":"ATP:cob(I)alamin Co-beta-adenosyltransferase activity","type":"narrow"},{"name":"ATP:cob(I)alamin cobeta-adenosyltransferase activity","type":"related"},{"name":"ATP:cob(I)yrinic acid-a,c-diamide cobeta-adenosyltransferase activity","type":"narrow"},{"name":"ATP:corrinoid adenosyltransferase activity","type":"related"},{"name":"aquacob(I)alamin adenosyltransferase activity","type":"narrow"},{"name":"aquocob(I)alamin vitamin B12s adenosyltransferase activity","type":"narrow"},{"name":"cob(I)alamin adenosyltransferase activity","type":"narrow"},{"name":"cob(I)yrinic acid a,c-diamide adenosyltransferase activity","type":"narrow"},{"name":"cob(II)yrinic acid a,c-diamide reductase activity","type":"narrow"},{"name":"cob(II)yrinic acid-a,c-diamide:FMN oxidoreductase activity","type":"narrow"},{"name":"vitamin B12s adenosyltransferase activity","type":"related"}],"termid":"GO:0008817"}


id: PBO:0003447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq7","termid":"PBO:0003447"}


id: PBO:0088087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose-4-epimerase; catalyzes interconversion of UDP-galactose and UDP-D-glucose in galactose metabolism; also catalyzes conversion of alpha-D-glucose or alpha-D-galactose to their beta-anomers; human homolog GALE implicated in galactosemia, can complement yeast null mutant","termid":"PBO:0088087"}


id: MOD:00137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue into L-3-phenyllactic acid.","definition_xrefs":["PubMed:1973541","RESID:AA0128","Unimod:7#F"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-phenyllactic acid","synonyms":[{"name":"(2S)-2-hydroxy-3-phenylpropanoic acid","type":"exact"},{"name":"Deamidated","type":"related"},{"name":"Deamidation","type":"related"},{"name":"L-3-phenyllactic acid","type":"exact"},{"name":"MOD_RES 3-phenyllactic acid","type":"exact"}],"termid":"MOD:00137"}


id: PBO:0061347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 5","termid":"PBO:0061347"}


id: PBO:0066032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 1","termid":"PBO:0066032"}


id: PBO:0076143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 2","termid":"PBO:0076143"}


id: MONDO:0006887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the parametrium, the connective tissue of the pelvic floor, extending from the subserous coat of the uterus laterally between the layers of the broad ligament.","definition_xrefs":["MESH:D010249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pelvic inflammatory disease","termid":"MONDO:0000922"},{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"serositis","termid":"MONDO:0043786"},{"relation_name":"is_a","term_name":"disorder of uterine broad ligament","termid":"MONDO:0045043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parametritis","secondary_identifiers":["MEDGEN:18295","EFO:1001084","DOID:1260","SCTID:280483007","UMLS:C0030455"],"synonyms":[{"name":"inflammation of parametrium","type":"exact"},{"name":"parametrium inflammation","type":"exact"},{"name":"pelvic cellulitis","type":"exact"}],"termid":"MONDO:0006887","xrefs":{"Monarch":{"xref_id":"0006887"}}}


id: MONDO:0006527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lack of sweating or the ability to sweat when provoked by the appropriate stimulus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland disorder","termid":"MONDO:0006615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"anhidrosis","secondary_identifiers":["SCTID:39659002","ICD9:705.0","UMLS:C0003028","DOID:11156","ICD10CM:L74.4","MESH:D007007","EFO:1000670","MEDGEN:1550"],"synonyms":[{"name":"absence of sweating","type":"exact"},{"name":"adiaphoresis","type":"exact"}],"termid":"MONDO:0006527","xrefs":{"Monarch":{"xref_id":"0006527"}}}


id: PBO:0041206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bystin like","termid":"PBO:0041206"}


id: PBO:0049391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 4","termid":"PBO:0049391"}


id: PBO:0060129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 30","termid":"PBO:0060129"}


id: PBO:0050506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C5","termid":"PBO:0050506"}


id: MONDO:0018909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete legionellosis (obsolete MONDO:0018909)","termid":"MONDO:0018909","xrefs":{"Monarch":{"xref_id":"0018909"}}}


id: PBO:0055950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 58","termid":"PBO:0055950"}


id: PR:G2TRP5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.17","synonyms":[{"name":"Spom972h-cox7","type":"exact"}],"termid":"PR:G2TRP5"}


id: PBO:0038318
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abstract","termid":"PBO:0038318"}


id: MONDO:0004436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liposarcoma that arises from the ovary and is composed of round to oval mesenchymal cells, small signet ring lipoblasts, and a rich network of capillaries in a myxoid stroma.","definition_xrefs":["NCIT:C5235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma of the ovary","termid":"MONDO:0003589"},{"relation_name":"is_a","term_name":"myxoid liposarcoma","termid":"MONDO:0013280"},{"relation_name":"is_a","term_name":"familial ovarian cancer","termid":"MONDO:0016248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian myxoid liposarcoma","secondary_identifiers":["MEDGEN:235420","UMLS:C1335170","DOID:8023"],"synonyms":[{"name":"myxoid liposarcoma of ovary","type":"exact"},{"name":"myxoid liposarcoma of the ovary","type":"exact"},{"name":"ovarian myxoid liposarcoma","type":"exact"},{"name":"ovary myxoid liposarcoma","type":"exact"}],"termid":"MONDO:0004436","xrefs":{"Monarch":{"xref_id":"0004436"}}}


id: PBO:0046754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 7","termid":"PBO:0046754"}


id: MONDO:0021761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An erythrocytic disorder that is characterized by macrocytosis and megaloblastic changes of the bone marrow cells, with additional morphological defects of hands and feet.","definition_xrefs":["PMID:7641772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acral dysostosis dyserythropoiesis syndrome","termid":"MONDO:0021761","xrefs":{"Monarch":{"xref_id":"0021761"}}}


id: GO:0072467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that occurs in response to signals generated as a result of cell shape checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete response to cell shape checkpoint signaling (obsolete GO:0072467)","synonyms":[{"name":"cell shape checkpoint effector process","type":"exact"},{"name":"response to signal involved in cell shape checkpoint","type":"exact"}],"termid":"GO:0072467"}


id: PBO:0055746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA regulator of hepatic lineages 1","termid":"PBO:0055746"}


id: MONDO:0014313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity","secondary_identifiers":["DOID:0111941","MEDGEN:816672","GARD:17732","OMIM:615707","Orphanet:437552","UMLS:C3810342"],"synonyms":[{"name":"CD16 deficiency","type":"exact"},{"name":"IMD20","type":"related"},{"name":"autosomal recessive primary immunodeficiency with defective spontaneous NK cell cytotoxicity","type":"exact"},{"name":"immunodeficiency 20","type":"related"},{"name":"immunodeficiency type 20","type":"exact"}],"termid":"MONDO:0014313","xrefs":{"Monarch":{"xref_id":"0014313"}}}


id: FYPO:0002627
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cell wall differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall during vegetative growth","termid":"FYPO:0000027"},{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"altered level of substance in cell wall","termid":"FYPO:0007492"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered level of substance in cell wall during vegetative growth","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abnormal level of substance in cell wall during vegetative growth","type":"exact"},{"name":"altered level of substance in cell wall during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002627","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: GO:1904801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron remodeling.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21609829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron maturation","termid":"GO:0014042"},{"relation_name":"is_a","term_name":"regulation of neuron remodeling","termid":"GO:1904799"},{"relation_name":"positively_regulates","term_name":"neuron remodeling","termid":"GO:0016322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron remodeling","synonyms":[{"name":"activation of axon pruning","type":"narrow"},{"name":"activation of neuron remodeling","type":"narrow"},{"name":"activation of neuronal remodeling","type":"narrow"},{"name":"positive regulation of axon pruning","type":"narrow"},{"name":"positive regulation of neuron remodelling","type":"exact"},{"name":"positive regulation of neuronal remodeling","type":"exact"},{"name":"up regulation of axon pruning","type":"narrow"},{"name":"up regulation of neuron remodeling","type":"exact"},{"name":"up regulation of neuronal remodeling","type":"exact"},{"name":"up-regulation of axon pruning","type":"narrow"},{"name":"up-regulation of neuron remodeling","type":"exact"},{"name":"up-regulation of neuronal remodeling","type":"exact"},{"name":"upregulation of axon pruning","type":"narrow"},{"name":"upregulation of neuron remodeling","type":"exact"},{"name":"upregulation of neuronal remodeling","type":"exact"}],"termid":"GO:1904801"}


id: PBO:0077952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 10-1","termid":"PBO:0077952"}


id: PBO:0003036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase Alr2 (predicted)","termid":"PBO:0003036"}


id: SO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a chromoplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chromoplast_sequence","termid":"SO:0000744"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_chromosome","synonyms":[{"name":"chromoplast chromosome","type":"exact"}],"termid":"SO:0000821"}


id: MONDO:0008100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipples inverted","secondary_identifiers":["OMIM:163600","MEDGEN:82844","UMLS:C0269269"],"synonyms":[{"name":"Mammillae Invertitae","type":"related"},{"name":"nipples inverted","type":"exact"}],"termid":"MONDO:0008100","xrefs":{"Monarch":{"xref_id":"0008100"}}}


id: PBO:0028108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_inositol_pentakisphosphate_level","termid":"PBO:0028108"}


id: PBO:0040716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF chromatin remodeling complex subunit BCL7B","termid":"PBO:0040716"}


id: PBO:0031093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vacuoles_present_in_increased_numbers_during_vegetative_growth","termid":"PBO:0031093"}


id: PBO:0064725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 61","termid":"PBO:0064725"}


id: PBO:0109079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3103","termid":"PBO:0109079"}


id: PBO:0005889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glycine, mitochondrial","termid":"PBO:0005889"}


id: PR:O94375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rex4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.09c","synonyms":[{"name":"Spom972h-rex4","type":"exact"}],"termid":"PR:O94375"}


id: MOD:01154
data:
  {"annotated_genes":["SJAG_03632","SJAG_03524","SJAG_02902","SJAG_02980"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82316,82388,82450,82451],"is_not":false,"summary":null,"term":"MOD:01154"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid to pyruvic acid.","definition_xrefs":["PubMed:10085076","PubMed:3042771","PubMed:8464063","RESID:AA0127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.0-71.1 Da","termid":"MOD:00769"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null,"SJAG_03632":null},"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Cys)","type":"exact"},{"name":"MOD_RES Pyruvic acid (Ser)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:01154","terms_by_termid":{"MOD:01154":null}}


id: MONDO:0032848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 65, susceptibility to viral infections","secondary_identifiers":["MEDGEN:1684865","DOID:0111978","OMIM:618648","UMLS:C5231441"],"synonyms":[{"name":"IMD65","type":"related"},{"name":"IMMUNODEFICIENCY 65, SUSCEPTIBILITY TO VIRAL INFECTIONS","type":"related"}],"termid":"MONDO:0032848","xrefs":{"Monarch":{"xref_id":"0032848"}}}


id: PBO:0044666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCXR divergent transcript","termid":"PBO:0044666"}


id: MONDO:0003032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the superior vena cava.","definition_xrefs":["NCIT:C5378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"},{"relation_name":"is_a","term_name":"great vessel cancer","termid":"MONDO:0040676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"superior vena cava angiosarcoma","secondary_identifiers":["DOID:4522","UMLS:C1336530","MEDGEN:234373"],"synonyms":[{"name":"angiosarcoma (disease) of anterior vena cava","type":"exact"},{"name":"angiosarcoma of Superior vena cava","type":"exact"},{"name":"angiosarcoma of the Superior vena cava","type":"exact"},{"name":"anterior vena cava angiosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003032","xrefs":{"Monarch":{"xref_id":"0003032"}}}


id: PBO:0074086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 3","termid":"PBO:0074086"}


id: PBO:0062419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 59 pseudogene","termid":"PBO:0062419"}


id: MONDO:0001498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by the dilated tortuous veins of the spermatic cord with a marked left-sided predominance. Adverse effect on male fertility occurs when varicocele leads to an increased scrotal (and testicular) temperature and reduced testicular volume.","definition_xrefs":["MESH:D014646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pelvic varices","termid":"MONDO:0004869"},{"relation_name":"is_a","term_name":"scrotal disorder","termid":"MONDO:0045003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"varicocele","secondary_identifiers":["MEDGEN:22619","DOID:12337","ICD10CM:I86.1","SCTID:46871008","UMLS:C0042341","ICD9:456.4"],"synonyms":[{"name":"scrotal varices","type":"exact"},{"name":"scrotum varicose disease","type":"exact"},{"name":"varicose disease of scrotum","type":"exact"}],"termid":"MONDO:0001498","xrefs":{"Monarch":{"xref_id":"0001498"}}}


id: PBO:0091615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine acetyltransferase","termid":"PBO:0091615"}


id: PBO:0003399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex zeta subunit Cct6","termid":"PBO:0003399"}


id: GO:1990680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a melanocyte-stimulating hormone stimulus. The binding of any one of three melanocyte-stimulating hormones causes dispersal of melanosomes in melanophores of poikilothermic vertebrates.","definition_xrefs":["PMID:17036007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to melanocyte-stimulating hormone","synonyms":[{"name":"response to MSH","type":"exact"}],"termid":"GO:1990680"}


id: GO:0140084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of haploid amoebae cells with matching mating types to form a larger cell, which ingests additional amoebae and forms a cellulose wall. The resulting macrocyst undergoes recombination and meiosis followed by release of haploid amoebae. An example of this process can be found in Dictyostelium discoideum.","definition_xrefs":["PMID:20089169","PMID:16592095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sexual macrocyst formation","synonyms":[{"name":"macrocyst formation","type":"related"},{"name":"sexual fusion","type":"related"}],"termid":"GO:0140084"}


id: MONDO:0019339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"47, XYY syndrome is a sex chromosome aneuploidy where males receive an additional Y chromosome, and is characterized clinically by tall stature evident from childhood, macrocephaly, facial features (mild hypertelorism, low set ears, a mildly flat malar region), speech delay and an increased risk for social and emotional difficulties, attention deficit hyperactive disorder and autistic spectrum disorder.","definition_xrefs":["Orphanet:8"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"47,XYY syndrome","secondary_identifiers":["NCIT:C85237","GARD:5674","MEDGEN:473794","MedDRA:10056894","SCTID:50749006","NORD:1871","MESH:C535317","UMLS:C3266843"],"synonyms":[{"name":"47, XYY syndrome","type":"related"},{"name":"47,XYY","type":"exact"},{"name":"47,XYY syndrome","type":"exact"},{"name":"Double Y","type":"exact"},{"name":"Double Y syndrome","type":"exact"},{"name":"XYY Syndrome","type":"exact"},{"name":"XYY karyotype","type":"exact"},{"name":"XYY syndrome","type":"exact"},{"name":"Y disomy","type":"exact"},{"name":"YY syndrome","type":"related"},{"name":"disomy Y","type":"exact"}],"termid":"MONDO:0019339","xrefs":{"Monarch":{"xref_id":"0019339"}}}


id: PBO:0110030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 2","termid":"PBO:0110030"}


id: PBO:0043446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 7","termid":"PBO:0043446"}


id: PBO:0057863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3174","termid":"PBO:0057863"}


id: PBO:0072010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 12","termid":"PBO:0072010"}


id: FYPO:0001753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow normally (i.e. indistinguishably from wild type) under anaerobic conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal anaerobic cell population growth","synonyms":[{"name":"normal anaerobic growth","type":"broad"}],"termid":"FYPO:0001753"}


id: PBO:0063310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCGF3 antisense RNA 1","termid":"PBO:0063310"}


id: PBO:0047768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOSL2 antisense RNA 1","termid":"PBO:0047768"}


id: MONDO:0019692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple epiphyseal dysplasia and pseudoachondroplasia (obsolete MONDO:0019692)","secondary_identifiers":["icd11.foundation:2078345611","Orphanet:93429"],"termid":"MONDO:0019692","xrefs":{"Monarch":{"xref_id":"0019692"}}}


id: GO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral response seeking to protect an organism from an a perceived external threat from a nematode or nematodes to that organism.","definition_xrefs":["PMID:14506883","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral defense response","termid":"GO:0002209"},{"relation_name":"is_a","term_name":"defense response to nematode","termid":"GO:0002215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral defense response to nematode","synonyms":[{"name":"behavioural defense response to nematode","type":"exact"}],"termid":"GO:0002212"}


id: PBO:0004090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 4-epimerase Uge1","termid":"PBO:0004090"}


id: GO:0120306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of perturbations or damage to the actin cytoskeleton.","definition_xrefs":["PMID:32915139","GOC:krc","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to actin cytoskeletal stress","references_by_uniquename":{"PMID:32915139":null},"secondary_identifiers":["GO:1903957","GO:1904804","GO:1903956","GO:1904805"],"synonyms":[{"name":"cellular response to actin cytoskeleton stress","type":"exact"},{"name":"cellular response to latrunculin A","type":"narrow"},{"name":"cellular response to latrunculin B","type":"narrow"},{"name":"response to latrunculin A","type":"narrow"},{"name":"response to latrunculin B","type":"narrow"}],"termid":"GO:0120306"}


id: MONDO:0975827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome 21","secondary_identifiers":["OMIM:301132"],"termid":"MONDO:0975827","xrefs":{"Monarch":{"xref_id":"0975827"}}}


id: PBO:0039933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 38","termid":"PBO:0039933"}


id: PBO:0108893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 6","termid":"PBO:0108893"}


id: FYPO:0003488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated cell during cellular response to ionizing radiation (obsolete FYPO:0003488)","synonyms":[{"name":"elongated cell during cellular response to IR","type":"exact"},{"name":"elongated cell during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"elongated cell during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"elongated in response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003488"}


id: RO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is in taxon y if an only if y is an organism, and the relationship between x and y is one of: part of (reflexive), developmentally preceded by, derives from, secreted by, expressed.","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_taxon","termid":"RO:0002162"}


id: MONDO:0000668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to orient parts of the body.","definition_xrefs":["DOID:0060138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autotopagnosia","secondary_identifiers":["MEDGEN:65883","UMLS:C0234511"],"termid":"MONDO:0000668","xrefs":{"Monarch":{"xref_id":"0000668"}}}


id: PBO:0025457
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"changed from ncRNA to protein 20151128","termid":"PBO:0025457"}


id: PBO:0086541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR006C is not an essential gene","termid":"PBO:0086541"}


id: GO:0098736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the force of heart muscle contraction.","definition_xrefs":["GOC:BHF","PMID:17242280","GOC:dos","GOC:rl","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of the force of heart contraction","termid":"GO:0098736"}


id: MONDO:0020842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Medullary carcinoma may refer to one of several different tumors of epithelial origin. As the term 'medulla' is a generic anatomic descriptor for the mid-layer of various organ tissues, a medullary tumor usually arises from the 'mid-layer tissues' of the relevant organ.","definition_xrefs":["Wikipedia:Medullary_carcinoma"],"gene_count":0,"genotype_count":0,"name":"obsolete medullary carcinoma (obsolete MONDO:0020842)","secondary_identifiers":["NCIT:C8998"],"termid":"MONDO:0020842","xrefs":{"Monarch":{"xref_id":"0020842"}}}


id: MONDO:0011219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Fried's tooth and nail syndrome","secondary_identifiers":["OMIM:602401","GARD:16903","DOID:0111661","Orphanet:99672","SCTID:239020008","UMLS:C3551424","MEDGEN:764338"],"synonyms":[{"name":"ECTD8","type":"related"},{"name":"ectodermal dysplasia 8, hair/tooth/nail type","type":"related"}],"termid":"MONDO:0011219","xrefs":{"Monarch":{"xref_id":"0011219"}}}


id: PR:Q10073
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H1.08c gene.","definition_xrefs":["UniProtKB:Q10073","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized CCDC90 family protein C3H1.08c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.08c","synonyms":[{"name":"Spom972h-SPAC3H1.08c","type":"exact"}],"termid":"PR:Q10073"}


id: MONDO:0016046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial clubfoot with or without associated lower limb anomalies is a rare congenital limb malformation syndrome characterized by malalignment of the bones and joints of the foot and ankle, with presence of forefoot and midfoot adductus, hindfoot varus, and ankle equinus, presenting as rigid inward turning of the foot towards the midline, in various members of a single family. Hypoplasia of lower leg muscles is a frequently associated finding. Patients may present with other low-limb malformations, such as patellar hypoplasia, oblique talus, tibial hemimelia, and polydactyly.","definition_xrefs":["Orphanet:199315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial clubfoot with or without associated lower limb anomalies","secondary_identifiers":["GARD:17093","UMLS:C5680522","MEDGEN:1843133"],"termid":"MONDO:0016046","xrefs":{"Monarch":{"xref_id":"0016046"}}}


id: GO:0003989
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79134],"is_not":false,"summary":null,"term":"GO:0003989"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA.","definition_xrefs":["EC:6.4.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA carboxylase activity","termid":"GO:0016421"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"acetyl-CoA carboxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-75851","MetaCyc:ACETYL-COA-CARBOXYLTRANSFER-RXN","Reactome:R-HSA-8876889","RHEA:11308","Reactome:R-HSA-200555"],"synonyms":[{"name":"acetyl coenzyme A carboxylase activity","type":"related"},{"name":"acetyl-CoA:carbon-dioxide ligase (ADP-forming)","type":"related"}],"termid":"GO:0003989","terms_by_termid":{"GO:0003989":null}}


id: PBO:0072382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 8","termid":"PBO:0072382"}


id: GO:0007542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transmission of information about sexual status, from the initial general determination, to signals specific to the germ-line.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination","termid":"GO:0007538"},{"relation_name":"part_of","term_name":"germ-line sex determination","termid":"GO:0018992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary sex determination, germ-line","termid":"GO:0007542"}


id: GO:2000955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin metabolic process","termid":"GO:2000954"},{"relation_name":"negatively_regulates","term_name":"cyclodextrin metabolic process","termid":"GO:2000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of cyclodextrin metabolic process","synonyms":[{"name":"negative regulation of cyclodextrin metabolism","type":"exact"}],"termid":"GO:2000955"}


id: PBO:0017031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GEMIN7 ortholog","termid":"PBO:0017031"}


id: PBO:0039148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 3","termid":"PBO:0039148"}


id: MONDO:1012533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"calvarial hyperostotic syndrome, non-human animal","termid":"MONDO:1011658"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calvarial hyperostotic syndrome, lion","secondary_identifiers":["OMIA:002245-9689"],"termid":"MONDO:1012533","xrefs":{"Monarch":{"xref_id":"1012533"}}}


id: FYPO:0003585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome, is decreased.","definition_xrefs":["GO:0031145","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteasomal ubiquitin-dependent protein degradation","termid":"FYPO:0004545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased anaphase-promoting complex-dependent protein catabolic process","synonyms":[{"name":"decreased anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"decreased anaphase-promoting complex-dependent protein catabolic process during mitotic cell cycle","type":"related"},{"name":"decreased anaphase-promoting complex-dependent protein catabolic process during vegetative growth","type":"exact"},{"name":"decreased anaphase-promoting complex-dependent protein degradation","type":"exact"},{"name":"reduced anaphase-promoting complex-dependent protein catabolic process","type":"exact"}],"termid":"FYPO:0003585"}


id: PBO:0030830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoribosylamine-glycine_ligase_activity","termid":"PBO:0030830"}


id: PBO:0074654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 41B","termid":"PBO:0074654"}


id: MONDO:0010416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, cataract, retinitis pigmentosa, and sperm abnormalities","secondary_identifiers":["OMIM:300719","MESH:C567467","MEDGEN:395517","UMLS:C2678011"],"synonyms":[{"name":"deafness, cataract, retinitis pigmentosa, and sperm abnormalities","type":"exact"},{"name":"deafness, cataract, retinitis pigmentosa, and sperm abnormalities, X-linked recessive","type":"exact"}],"termid":"MONDO:0010416","xrefs":{"Monarch":{"xref_id":"0010416"}}}


id: PBO:0039516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 31","termid":"PBO:0039516"}


id: FYPO:0002896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to calcium ions. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription during cellular response to calcium ion","synonyms":[{"name":"normal transcription during cellular response to calcium","type":"exact"},{"name":"normal transcription during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"normal transcription in response to calcium","type":"exact"}],"termid":"FYPO:0002896"}


id: PBO:0027864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_acetylation","termid":"PBO:0027864"}


id: PBO:0077039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 7","termid":"PBO:0077039"}


id: GO:0106120
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a sterol biosynthetic process.","definition_xrefs":["GOC:rph","PMID:16459310","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"regulation of sterol biosynthetic process","termid":"GO:0106118"},{"relation_name":"positively_regulates","term_name":"sterol biosynthetic process","termid":"GO:0016126"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of sterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106120","terms_by_termid":{"GO:0070452":null}}


id: PBO:0079912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 2","termid":"PBO:0079912"}


id: GO:0036085
data:
  {"annotated_genes":["SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95179],"is_not":false,"summary":null,"term":"GO:0036085"}]},"cv_name":"biological_process","definition":"The directed movement of GDP-fucose into the Golgi lumen. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:sart","PMID:3458237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-fucose transmembrane transport","termid":"GO:0015783"},{"relation_name":"is_a","term_name":"cytosol to Golgi apparatus transport","termid":"GO:0140820"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"GDP-fucose import into Golgi lumen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GDP-fucose import into Golgi","type":"exact"},{"name":"GDP-fucose transport across Golgi membrane","type":"exact"},{"name":"GDP-fucose transport into Golgi lumen","type":"exact"}],"termid":"GO:0036085","terms_by_termid":{"GO:0036085":null}}


id: PBO:0025547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein Udp7","termid":"PBO:0025547"}


id: MONDO:0006678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A concretion in the urinary bladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lower urinary tract calculus","termid":"MONDO:0004828"},{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder calculus","secondary_identifiers":["DOID:11355","MedDRA:10005001","ICD9:594.1","SCTID:70650003","MESH:D001744","UMLS:C0005683","EFO:1000839","MEDGEN:14149"],"termid":"MONDO:0006678","xrefs":{"Monarch":{"xref_id":"0006678"}}}


id: PBO:0029723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_nocodazole","termid":"PBO:0029723"}


id: MONDO:0011916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive Charcot-Marie-Tooth disease with hoarseness (ARCMT2K or CMT4C4) is a severe early-onset form of axonal CMT peripheral sensorimotor polyneuropathy.","definition_xrefs":["Orphanet:101097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2K","secondary_identifiers":["DOID:0110167","MEDGEN:375064","GARD:12448","OMIM:607831","SCTID:725047007","UMLS:C1842983"],"synonyms":[{"name":"ARCMT2K","type":"exact"},{"name":"CMT2K","type":"related"},{"name":"Charcot-Marie-Tooth disease, autosomal dominant, type 2K","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2K","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2K","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2K","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy axonal type 2K","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, axonal, type 2K","type":"related"},{"name":"autosomal recessive Charcot-Marie-Tooth disease with hoarseness","type":"exact"},{"name":"autosomal recessive axonal CMT4C4","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease disease type 2K","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2K","type":"exact"}],"termid":"MONDO:0011916","xrefs":{"Monarch":{"xref_id":"0011916"}}}


id: GO:0042940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the D-enantiomer of an amino acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"D-amino acid transport","termid":"GO:0042940"}


id: GO:0090521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a podocyte from one site to another, often during the development of a multicellular organism or multicellular structure. A podocyte is a specialized kidney epithelial cell.","definition_xrefs":["GOC:pm","PMID:21402783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte cell migration","synonyms":[{"name":"glomerular visceral epithelial cell migration","type":"exact"}],"termid":"GO:0090521"}


id: GO:1905535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eukaryotic translation initiation factor 4F complex assembly.","definition_xrefs":["PMID:18426977","GOC:PARL","GO_REF:0000058","GOC:TermGenie","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"eukaryotic translation initiation factor 4F complex assembly","termid":"GO:0097010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of eukaryotic translation initiation factor 4F complex assembly","synonyms":[{"name":"regulation of eIF-4F assembly","type":"exact"},{"name":"regulation of eIF4F assembly","type":"exact"}],"termid":"GO:1905535"}


id: PR:P40382
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdt1 gene.","definition_xrefs":["UniProtKB:P40382","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle protein cdt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.18","synonyms":[{"name":"Spom972h-cdt1","type":"exact"}],"termid":"PR:P40382"}


id: GO:0035443
data:
  {"annotated_genes":["SJAG_01344","SJAG_01983","SJAG_01660","SJAG_03577","SJAG_05213","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[115102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[98924,97935,120204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[104914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The directed movement of a tripeptide across a membrane by means of some agent such as a transporter or pore. A tripeptide is a compound containing three amino acids linked together by peptide bonds.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"tripeptide transport","termid":"GO:0042939"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"tripeptide transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tripeptide membrane transport","type":"exact"}],"termid":"GO:0035443","terms_by_termid":{"GO:0071996":null,"GO:0098709":null,"GO:0140207":null,"GO:0160007":null}}


id: GO:0018611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methylbenzoate + NADH + O2 + H+ = NAD+ + 1,2-dihydroxymethylcyclohexa-3,5-dienecarboxylate.","definition_xrefs":["UM-BBD_enzymeID:e0190"],"gene_count":0,"genotype_count":0,"name":"obsolete toluate dioxygenase activity (obsolete GO:0018611)","termid":"GO:0018611"}


id: GO:0003778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete dynactin motor (obsolete GO:0003778)","synonyms":[{"name":"dynactin motor","type":"exact"}],"termid":"GO:0003778"}


id: PBO:0047251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 239 member B","termid":"PBO:0047251"}


id: GO:2000306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of photomorphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photomorphogenesis","termid":"GO:0010099"},{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"photomorphogenesis","termid":"GO:0009640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of photomorphogenesis","synonyms":[{"name":"positive regulation of plant development in response to light","type":"exact"}],"termid":"GO:2000306"}


id: GO:1900663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of emericellamide A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of emericellamide biosynthetic process","termid":"GO:1900660"},{"relation_name":"is_a","term_name":"regulation of emericellamide A biosynthetic process","termid":"GO:1900661"},{"relation_name":"positively_regulates","term_name":"emericellamide A biosynthetic process","termid":"GO:1900617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of emericellamide A biosynthetic process","synonyms":[{"name":"activation of emericellamide A anabolism","type":"exact"},{"name":"activation of emericellamide A biosynthesis","type":"exact"},{"name":"activation of emericellamide A biosynthetic process","type":"narrow"},{"name":"activation of emericellamide A formation","type":"exact"},{"name":"activation of emericellamide A synthesis","type":"exact"},{"name":"positive regulation of emericellamide A anabolism","type":"exact"},{"name":"positive regulation of emericellamide A biosynthesis","type":"exact"},{"name":"positive regulation of emericellamide A formation","type":"exact"},{"name":"positive regulation of emericellamide A synthesis","type":"exact"},{"name":"up regulation of emericellamide A anabolism","type":"exact"},{"name":"up regulation of emericellamide A biosynthesis","type":"exact"},{"name":"up regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"up regulation of emericellamide A formation","type":"exact"},{"name":"up regulation of emericellamide A synthesis","type":"exact"},{"name":"up-regulation of emericellamide A anabolism","type":"exact"},{"name":"up-regulation of emericellamide A biosynthesis","type":"exact"},{"name":"up-regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"up-regulation of emericellamide A formation","type":"exact"},{"name":"up-regulation of emericellamide A synthesis","type":"exact"},{"name":"upregulation of emericellamide A anabolism","type":"exact"},{"name":"upregulation of emericellamide A biosynthesis","type":"exact"},{"name":"upregulation of emericellamide A biosynthetic process","type":"exact"},{"name":"upregulation of emericellamide A formation","type":"exact"},{"name":"upregulation of emericellamide A synthesis","type":"exact"}],"termid":"GO:1900663"}


id: MONDO:0006878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the family moraxellaceae.","definition_xrefs":["MESH:D045828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Moraxellaceae infectious disease","secondary_identifiers":["EFO:1001072"],"synonyms":[{"name":"Moraxella infection","type":"related"},{"name":"Moraxella infections","type":"related"},{"name":"Moraxellaceae caused disease or disorder","type":"exact"},{"name":"Moraxellaceae disease or disorder","type":"exact"},{"name":"Moraxellaceae infection","type":"related"},{"name":"Psychobacter infection","type":"related"},{"name":"Psychobacter infections","type":"related"},{"name":"infection, Moraxella","type":"related"},{"name":"infection, Moraxellaceae","type":"related"},{"name":"infection, Psychobacter","type":"related"},{"name":"infections, Moraxella","type":"related"},{"name":"infections, Moraxellaceae","type":"related"},{"name":"infections, Psychobacter","type":"related"}],"termid":"MONDO:0006878","xrefs":{"Monarch":{"xref_id":"0006878"}}}


id: PBO:0089231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI family protein, domain found in context with a broad range of enzymes","termid":"PBO:0089231"}


id: PBO:0078333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-5","termid":"PBO:0078333"}


id: PBO:0084061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) for yeast Rab family member Ypt6p; involved in vesicle mediated protein transport","termid":"PBO:0084061"}


id: SO:0001256
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polyploid where the multiple chromosome set was derived from a different organism.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"SO:0001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allopolyploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Allopolyploid"],"termid":"SO:0001256"}


id: GO:0060205
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a cytoplasmic vesicle.","definition_xrefs":["GOC:dph","GOC:vesicles"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle lumen","termid":"GO:0031983"},{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"cytoplasmic vesicle lumen","synonyms":[{"name":"cytoplasmic membrane-bounded vesicle lumen","type":"related"},{"name":"cytoplasmic membrane-enclosed vesicle lumen","type":"related"}],"termid":"GO:0060205"}


id: PBO:0054284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1675","termid":"PBO:0054284"}


id: PBO:0072862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP","termid":"PBO:0072862"}


id: GO:0061551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trigeminal ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion development","synonyms":[{"name":"trigeminal ganglia development","type":"related"}],"termid":"GO:0061551"}


id: GO:0044477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism inhibits or disrupts platelet aggregation in another organism via the action of a venom.","definition_xrefs":["PMID:28435120","PMID:37818211","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of hemostasis","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated suppression of platelet aggregation","synonyms":[{"name":"envenomation resulting in negative regulation of platelet aggregation in another organism","type":"exact"},{"name":"envenomation resulting in negative regulation of platelet aggregation in other organism","type":"exact"},{"name":"envenomation suppressing platelet aggregation","type":"exact"},{"name":"venom-mediated suppression of platelet agglutination","type":"related"}],"termid":"GO:0044477"}


id: GO:1905133
data:
  {"annotated_genes":["SJAG_04126","SJAG_01330","SJAG_01837","SJAG_01082","SJAG_01515","SJAG_03327","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108243,116476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[77142,118654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[100567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[115760],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[103234],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic chromosome separation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw","PMID:15620645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic chromosome separation","termid":"GO:1905132"},{"relation_name":"is_a","term_name":"negative regulation of chromosome separation","termid":"GO:1905819"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of meiotic chromosome separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of chromosome separation during meiosis","type":"exact"},{"name":"down regulation of meiotic chromosome resolution","type":"exact"},{"name":"down regulation of meiotic chromosome separation","type":"exact"},{"name":"down-regulation of chromosome separation during meiosis","type":"exact"},{"name":"down-regulation of meiotic chromosome resolution","type":"exact"},{"name":"down-regulation of meiotic chromosome separation","type":"exact"},{"name":"downregulation of chromosome separation during meiosis","type":"exact"},{"name":"downregulation of meiotic chromosome resolution","type":"exact"},{"name":"downregulation of meiotic chromosome separation","type":"exact"},{"name":"inhibition of chromosome separation during meiosis","type":"narrow"},{"name":"inhibition of meiotic chromosome resolution","type":"narrow"},{"name":"inhibition of meiotic chromosome separation","type":"narrow"},{"name":"negative regulation of chromosome separation during meiosis","type":"exact"},{"name":"negative regulation of meiotic chromosome resolution","type":"exact"}],"termid":"GO:1905133","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:1902661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucose mediated signaling pathway.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:24277933","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glucose mediated signaling pathway","termid":"GO:1902659"},{"relation_name":"positively_regulates","term_name":"glucose mediated signaling pathway","termid":"GO:0010255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucose mediated signaling pathway","synonyms":[{"name":"activation of glucose mediated signaling pathway","type":"narrow"},{"name":"activation of glucose mediated signalling","type":"narrow"},{"name":"positive regulation of glucose mediated signalling","type":"exact"},{"name":"up regulation of glucose mediated signaling pathway","type":"exact"},{"name":"up regulation of glucose mediated signalling","type":"exact"},{"name":"up-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"up-regulation of glucose mediated signalling","type":"exact"},{"name":"upregulation of glucose mediated signaling pathway","type":"exact"},{"name":"upregulation of glucose mediated signalling","type":"exact"}],"termid":"GO:1902661"}


id: PBO:0029667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_morphology_during_mitosis","termid":"PBO:0029667"}


id: MONDO:0018506
data:
  {"annotated_genes":["SJAG_03920","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88620,88621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011719"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"mesenchymal tumor of small intestine","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843104","GARD:21761","Orphanet:423798","UMLS:C5680077"],"synonyms":[{"name":"mesenchymal tumor of small bowel","type":"exact"},{"name":"mesenchymal tumour of small bowel","type":"exact"}],"termid":"MONDO:0018506","terms_by_termid":{"MONDO:0011719":null},"xrefs":{"Monarch":{"xref_id":"0018506"}}}


id: RO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with_via_parasite-host_interaction","termid":"RO:0002443"}


id: PR:Q9Y7R5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An insulin-induced gene 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSIG family protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.05c","secondary_identifiers":["UniProtKB:Q9Y7R5"],"synonyms":[{"name":"SPCC306.05c","type":"related"},{"name":"Spom972h-INSIG1","type":"exact"}],"termid":"PR:Q9Y7R5"}


id: _global:helper_property_(not_for_use_in_curation)
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper_property_(not_for_use_in_curation)","secondary_identifiers":["RO:0002464"],"termid":"_global:helper_property_(not_for_use_in_curation)"}


id: PBO:0041303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2CD5 antisense RNA 1","termid":"PBO:0041303"}


id: PBO:0082466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium/H+ antiporter localized to the endoplasmic reticulum membrane; member of the calcium exchanger (CAX) family; potential Cdc28p substrate","termid":"PBO:0082466"}


id: PBO:0059825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 5","termid":"PBO:0059825"}


id: MONDO:1010241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Giant axonal neuropathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy, non-human animal","termid":"MONDO:1010239"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"giant axonal neuropathy, non-human animal","secondary_identifiers":["OMIA:001207"],"termid":"MONDO:1010241","xrefs":{"Monarch":{"xref_id":"1010241"}}}


id: PBO:0084633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2634 methylation of the 25S rRNA; S-adenosylmethionine-dependent; associates with precursors of the 60S ribosomal subunit; predicted to be involved in ribosome biogenesis","termid":"PBO:0084633"}


id: GO:0021630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory nerve to attain its fully functional state. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve maturation","synonyms":[{"name":"CN I maturation","type":"exact"}],"termid":"GO:0021630"}


id: PBO:0053650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 702","termid":"PBO:0053650"}


id: PATO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an entire organism or part of an organism.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organismal quality","termid":"PATO:0001995"}


id: MONDO:0043114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Landy-Donnai syndrome","secondary_identifiers":["MEDGEN:419417","MESH:C537266","UMLS:C2931460"],"synonyms":[{"name":"hydrops, ectrodactyly, syndactyly, duplication of the great toes","type":"related"}],"termid":"MONDO:0043114","xrefs":{"Monarch":{"xref_id":"0043114"}}}


id: GO:0030502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of bone mineralization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ossification","termid":"GO:0030279"},{"relation_name":"is_a","term_name":"regulation of bone mineralization","termid":"GO:0030500"},{"relation_name":"is_a","term_name":"negative regulation of biomineral tissue development","termid":"GO:0070168"},{"relation_name":"negatively_regulates","term_name":"bone mineralization","termid":"GO:0030282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone mineralization","synonyms":[{"name":"down regulation of bone mineralization","type":"exact"},{"name":"down-regulation of bone mineralization","type":"exact"},{"name":"downregulation of bone mineralization","type":"exact"},{"name":"inhibition of bone mineralization","type":"narrow"}],"termid":"GO:0030502"}


id: GO:0060603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the mammary ducts are generated and organized. Mammary ducts are epithelial tubes that transport milk.","definition_xrefs":["GOC:dph","PMID:17120154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"mammary gland morphogenesis","termid":"GO:0060443"},{"relation_name":"part_of","term_name":"mammary gland epithelium development","termid":"GO:0061180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland duct morphogenesis","termid":"GO:0060603"}


id: PBO:0061900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid receptor delta 1","termid":"PBO:0061900"}


id: MONDO:0015857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare non-malformative gynecologic or obstetric disease (obsolete MONDO:0015857)","secondary_identifiers":["Orphanet:180199"],"termid":"MONDO:0015857","xrefs":{"Monarch":{"xref_id":"0015857"}}}


id: PBO:0035869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_transport_along_microtubule_during_vegetative_growth","termid":"PBO:0035869"}


id: FYPO:0004171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell that is subject to glucose starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during glucose starvation","synonyms":[{"name":"normal RNA accumulation during glucose starvation","type":"related"},{"name":"normal RNA level during cellular response to glucose starvation","type":"exact"},{"name":"normal RNA level during glucose depletion","type":"exact"},{"name":"normal RNA level during glucose deprivation","type":"exact"},{"name":"normal RNA level during glucose limitation","type":"related"},{"name":"normal cellular RNA level during glucose starvation","type":"exact"},{"name":"normal mRNA level during glucose starvation","type":"narrow"},{"name":"normal transcript level during glucose starvation","type":"exact"}],"termid":"FYPO:0004171"}


id: PBO:0108966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 1C","termid":"PBO:0108966"}


id: GO:0038007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a netrin protein to its receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Netrins can act as chemoattractant signals for some cells and chemorepellent signals for others. Netrins also have roles outside of cell and axon guidance.","definition_xrefs":["PMID:15960985","PMID:10399919","PMID:19785719","GOC:signaling","PMID:20108323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"netrin-activated signaling pathway","synonyms":[{"name":"netrin signaling pathway","type":"exact"},{"name":"netrin-activated signal transduction pathway","type":"exact"},{"name":"netrin-activated signalling pathway","type":"exact"},{"name":"netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:0038007"}


id: PBO:0052691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 15","termid":"PBO:0052691"}


id: PBO:0059665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 31","termid":"PBO:0059665"}


id: MONDO:0004950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the stomach.","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric carcinoma","secondary_identifiers":["ICD9:230.2","UMLS:C0699791","SCTID:187741001","NCIT:C4911","SCTID:92756002","DOID:10538","DOID:5517","EFO:0000178","MEDGEN:147066","ICD9:151.3"],"synonyms":[{"name":"Ca fundus - stomach","type":"narrow"},{"name":"cancer of fundus of stomach","type":"narrow"},{"name":"cancer of stomach","type":"broad"},{"name":"cancer of the stomach","type":"broad"},{"name":"carcinoma of stomach","type":"exact"},{"name":"carcinoma of the stomach","type":"exact"},{"name":"fundus of stomach cancer","type":"narrow"},{"name":"gastric (stomach) cancer","type":"broad"},{"name":"gastric cancer","type":"broad"},{"name":"gastric cancer, NOS","type":"broad"},{"name":"gastric carcinoma","type":"exact"},{"name":"gastric fundus cancer","type":"narrow"},{"name":"malignant fundus of stomach neoplasm","type":"narrow"},{"name":"malignant neoplasm of fundus of stomach","type":"narrow"},{"name":"malignant tumor of fundus of stomach","type":"narrow"},{"name":"malignant tumour of fundus of stomach","type":"narrow"},{"name":"stomach cancer","type":"broad"},{"name":"stomach carcinoma","type":"exact"}],"termid":"MONDO:0004950","xrefs":{"Monarch":{"xref_id":"0004950"}}}


id: GO:0050060
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain alcohol + 2 NAD+ + H2O = a long-chain carboxylate + 2 NADH.","definition_xrefs":["MetaCyc:LONG-CHAIN-ALCOHOL-DEHYDROGENASE-RXN","EC:1.1.1.192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"long-chain-alcohol dehydrogenase activity","secondary_identifiers":["RHEA:17977"],"synonyms":[{"name":"fatty alcohol oxidoreductase activity","type":"related"},{"name":"long-chain alcohol dehydrogenase activity","type":"related"},{"name":"long-chain-alcohol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050060"}


id: MONDO:0011998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant slowed nerve conduction velocity is a hereditary demyelinating motor and sensory neuropathy characterized by slowed nerve conduction velocities, in the absence of clinically apparent neurological deficits, gait abnormalities or muscular atrophy, associated with a germline mutation in the ARGHEF10 gene.","definition_xrefs":["Orphanet:140481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy","termid":"MONDO:0015358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"autosomal dominant slowed nerve conduction velocity","secondary_identifiers":["MEDGEN:330829","MESH:C564269","OMIM:608236","SCTID:764854006","UMLS:C1842357","GARD:16962"],"synonyms":[{"name":"SNCV","type":"related"},{"name":"autosomal dominant slowed nerve conduction velocity","type":"exact"},{"name":"slowed nerve conduction velocity, AD","type":"exact"},{"name":"slowed nerve conduction velocity, autosomal dominant","type":"related"}],"termid":"MONDO:0011998","xrefs":{"Monarch":{"xref_id":"0011998"}}}


id: GO:1901435
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of toluene catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of toluene catabolic process","termid":"GO:1901434"},{"relation_name":"is_a","term_name":"negative regulation of toluene metabolic process","termid":"GO:1901438"},{"relation_name":"negatively_regulates","term_name":"toluene catabolic process","termid":"GO:0042203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of toluene catabolic process","synonyms":[{"name":"down regulation of toluene breakdown","type":"exact"},{"name":"down regulation of toluene catabolic process","type":"exact"},{"name":"down regulation of toluene catabolism","type":"exact"},{"name":"down regulation of toluene degradation","type":"exact"},{"name":"down-regulation of toluene breakdown","type":"exact"},{"name":"down-regulation of toluene catabolic process","type":"exact"},{"name":"down-regulation of toluene catabolism","type":"exact"},{"name":"down-regulation of toluene degradation","type":"exact"},{"name":"downregulation of toluene breakdown","type":"exact"},{"name":"downregulation of toluene catabolic process","type":"exact"},{"name":"downregulation of toluene catabolism","type":"exact"},{"name":"downregulation of toluene degradation","type":"exact"},{"name":"inhibition of toluene breakdown","type":"exact"},{"name":"inhibition of toluene catabolic process","type":"narrow"},{"name":"inhibition of toluene catabolism","type":"exact"},{"name":"inhibition of toluene degradation","type":"exact"},{"name":"negative regulation of toluene breakdown","type":"exact"},{"name":"negative regulation of toluene catabolism","type":"exact"},{"name":"negative regulation of toluene degradation","type":"exact"}],"termid":"GO:1901435"}


id: PBO:0085044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential INO80 chromatin remodeling complex subunit; preferentially binds DNA ends, protecting them from exonucleatic cleavage; deletion affects telomere maintenance via recombination; related to mammalian high mobility group proteins","termid":"PBO:0085044"}


id: PBO:0039892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor alpha","termid":"PBO:0039892"}


id: FYPO:0003227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the long cytoplasmic microtubules characteristic of interphase cells remain present after mitosis begins and the mitotic spindle forms.","definition_xrefs":["PomBase:mah","PMID:18799626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"interphase microtubules present during mitosis","synonyms":[{"name":"interphase cytoplasmic microtubules present during mitosis","type":"exact"},{"name":"interphase microtubules present during M phase of mitotic cell cycle","type":"related"},{"name":"interphase microtubules present during mitosis during vegetative growth","type":"exact"},{"name":"interphase microtubules present during mitotic M phase","type":"related"},{"name":"interphase microtubules present during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0003227"}


id: GO:0103069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 17alpha-hydroxyprogesterone + O2 + reduced [NADPH--hemoprotein reductase] = 11-deoxycortisol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:50308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 21-monooxygenase activity","termid":"GO:0004509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"17-hydroxyprogesterone 21-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN66-356"],"termid":"GO:0103069"}


id: MONDO:0004006
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceptionally rare cystadenofibroma that arises from the rete ovarii.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"rete ovarii neoplasm","termid":"MONDO:0003192"},{"relation_name":"is_a","term_name":"cystadenofibroma","termid":"MONDO:0003464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rete ovarii cystadenofibroma","secondary_identifiers":["NCIT:C40020","UMLS:C1514906","DOID:6838","MEDGEN:308159"],"synonyms":[{"name":"cystadenofibroma of rete ovarii","type":"exact"},{"name":"rete ovarii cystadenofibroma","type":"exact"}],"termid":"MONDO:0004006","xrefs":{"Monarch":{"xref_id":"0004006"}}}


id: MONDO:0000425
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  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id: PATO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being free of curves, bends, or angles.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"straight","termid":"PATO:0002180"}


id: PBO:0042873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 119","termid":"PBO:0042873"}


id: PBO:0056464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase 2","termid":"PBO:0056464"}


id: GO:0097069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroxine stimulus.","definition_xrefs":["PMID:9916872","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to thyroid hormone stimulus","termid":"GO:0097067"},{"relation_name":"is_a","term_name":"response to thyroxine","termid":"GO:0097068"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"cellular response to L-phenylalanine derivative","termid":"GO:1904387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thyroxine stimulus","synonyms":[{"name":"cellular response to T4 stimulus","type":"exact"}],"termid":"GO:0097069"}


id: PBO:0087443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit H of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; serves as an activator or a structural stabilizer of the V-ATPase; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087443"}


id: PBO:0029029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body_during_mitosis","termid":"PBO:0029029"}


id: GO:1901620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway","termid":"GO:0008589"},{"relation_name":"regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901620"}


id: GO:0052057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type III secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type III secretion system (obsolete GO:0052057)","termid":"GO:0052057"}


id: GO:0090224
data:
  {"annotated_genes":["SJAG_00514","SJAG_00244","SJAG_02332","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[73183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[117032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[91697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"spindle organization","termid":"GO:0007051"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"regulation of spindle organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle organisation","type":"exact"}],"termid":"GO:0090224","terms_by_termid":{"GO:0060236":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: PBO:0089395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF757 family protein, human PBDC1 ortholog","termid":"PBO:0089395"}


id: PBO:0045841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 31","termid":"PBO:0045841"}


id: MONDO:0060677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 1","termid":"MONDO:0016883"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1p35 deletion syndrome","secondary_identifiers":["MEDGEN:1632676","UMLS:C4693669","OMIM:617930"],"synonyms":[{"name":"chromosome 1p35 deletion syndrome","type":"exact"}],"termid":"MONDO:0060677","xrefs":{"Monarch":{"xref_id":"0060677"}}}


id: MONDO:0017762
data:
  {"annotated_genes":["SJAG_00379","SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012251"},{"annotations":[87268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010651"},{"annotations":[88905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[88946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010200"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of cellular copper ion homeostasis.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of mineral absorption and transport","termid":"MONDO:0017761"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of copper metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0012714","GARD:21354","icd11.foundation:1926278296","SCTID:79886009","Orphanet:309839","MEDGEN:507647","ICD9:275.1","MedDRA:10061091"],"synonyms":[{"name":"copper Transport disorders","type":"related"},{"name":"inborn cellular copper ion homeostasis disorder","type":"exact"},{"name":"inborn error of cellular copper ion homeostasis","type":"exact"},{"name":"rare inborn error of cellular copper ion homeostasis","type":"exact"}],"termid":"MONDO:0017762","terms_by_termid":{"MONDO:0010200":null,"MONDO:0010572":null,"MONDO:0010651":null,"MONDO:0012251":null},"xrefs":{"Monarch":{"xref_id":"0017762"}}}


id: GO:0072005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a kidney is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of animal organ identity","termid":"GO:0048496"},{"relation_name":"part_of","term_name":"kidney rudiment formation","termid":"GO:0072003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of kidney identity","synonyms":[{"name":"maintenance of kidney anlage identity","type":"related"}],"termid":"GO:0072005"}


id: GO:0046151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"},{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment catabolic process","synonyms":[{"name":"eye pigment breakdown","type":"exact"},{"name":"eye pigment catabolism","type":"exact"},{"name":"eye pigment degradation","type":"exact"}],"termid":"GO:0046151"}


id: PBO:0065501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis susceptibility 1 candidate 3","termid":"PBO:0065501"}


id: FYPO:0005328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of cyclobutane pyrimidine dimers by error-free translesion synthesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:20453833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal error-free translesion synthesis","termid":"FYPO:0005325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0001312"],"is_obsolete":false,"name":"normal error-free translesion synthesis of cyclobutane pyrimidine dimers","synonyms":[{"name":"normal error-free translesion synthesis across TT-CPD","type":"exact"},{"name":"normal error-free translesion synthesis of cyclobutane pyrimidine dimers during mitotic cell cycle","type":"related"},{"name":"normal error-free translesion synthesis of cyclobutane pyrimidine dimers during vegetative growth","type":"exact"}],"termid":"FYPO:0005328"}


id: MONDO:0011071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The disorder is characterized by thrombocytopenia of varying severity and a predisposition to hematologic malignancies. It may be caused due to germ line variations in the RUNX1, ETV6 or ANKRD26 genes.","definition_xrefs":["PMID:28600339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary thrombocytopenia and hematologic cancer predisposition syndrome","secondary_identifiers":["NCIT:C162696","Orphanet:71290","MESH:C563324","SCTID:725034002","GARD:10352"],"synonyms":[{"name":"familial platelet syndrome with predisposition to acute myelogenous leukaemia","type":"related"},{"name":"familial thrombocytopenia with propensity to acute myelogenous leukaemia","type":"related"},{"name":"hereditary thrombocytopenia and hematologic cancer predisposition syndrome","type":"exact"},{"name":"thrombocytopenia, familial, with propensity to acute myelogenous leukaemia","type":"related"}],"termid":"MONDO:0011071","xrefs":{"Monarch":{"xref_id":"0011071"}}}


id: MONDO:0015948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic skin vascular disorder (obsolete MONDO:0015948)","secondary_identifiers":["Orphanet:183478"],"synonyms":[{"name":"genetic skin vascular disorder","type":"related"}],"termid":"MONDO:0015948","xrefs":{"Monarch":{"xref_id":"0015948"}}}


id: MONDO:0043510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute and chronic (see also brain INJURIES, CHRONIC) injuries to the brain, including the cerebral hemispheres, CEREBELLUM, and brain STEM. Clinical manifestations depend on the nature of injury. Diffuse trauma to the brain is frequently associated with DIFFUSE AXONAL INJURY or COMA, POST-TRAUMATIC. Localized injuries may be associated with NEUROBEHAVIORAL MANIFESTATIONS; HEMIPARESIS, or other focal neurologic deficits.","definition_xrefs":["MESH:D001930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"nervous system injury","termid":"MONDO:0044745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain injury","synonyms":[{"name":"brain Traumas","type":"related"},{"name":"brain injury","type":"exact"},{"name":"brain trauma","type":"related"},{"name":"injury of brain","type":"exact"}],"termid":"MONDO:0043510","xrefs":{"Monarch":{"xref_id":"0043510"}}}


id: PBO:0087880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator of a variety of genes; phosphorylation by protein kinase A stimulates Opi1p function in negative regulation of phospholipid biosynthetic genes; involved in telomere maintenance; null exhibits disrupted mitochondrial metabolism and low cardiolipin content, strongly correlated with overproduction of inositol; binds to phosphatidic acid","termid":"PBO:0087880"}


id: GO:0004399
data:
  {"annotated_genes":["SJAG_01137"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82097],"is_not":false,"summary":null,"term":"GO:0004399"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-histidinol + 2 NAD+ = 3 H+ + L-histidine + 2 NADH.","definition_xrefs":["RHEA:20641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01137":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histidinol dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.1.1.23","MetaCyc:RXN-8001"],"termid":"GO:0004399","terms_by_termid":{"GO:0004399":null}}


id: CHEBI:47322
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE","termid":"CHEBI:47322"}


id: GO:0160211
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the lipid bilayers that surround an apicoplast and form the apicoplast envelope.","definition_xrefs":["PMID:38865262","PMID:20124342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"apicoplast","termid":"GO:0020011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"apicoplast membrane","termid":"GO:0160211"}


id: PBO:0003344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tea1 anchoring protein Mod5","termid":"PBO:0003344"}


id: PBO:0028134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snoRNA_primary_transcript_level","termid":"PBO:0028134"}


id: PBO:0026993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_chloroacetaldehyde","termid":"PBO:0026993"}


id: MONDO:0017247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary sequestration","termid":"MONDO:0017843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"communicating congenital bronchopulmonary-foregut malformation","secondary_identifiers":["MEDGEN:539496","UMLS:C0265790","Orphanet:280821","GARD:21092"],"termid":"MONDO:0017247","xrefs":{"Monarch":{"xref_id":"0017247"}}}


id: GO:0102223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 H+ + 15-cis-4,4'-diapophytoene + 4 FAD = 4,4'-diapolycopene + 4 FADH2. This reaction consists of four successive dehydrogenations that lead to the introduction of three double bonds into 4,4'-diapophytoene (dehydrosqualene), with 4,4'-diapophytofluene, 4,4'-diapo-zeta-carotene and 4,4'-diapolycopene as intermediates, and 4,4'-diapolycopene as the end product.","definition_xrefs":["RHEA:31391","PMID:8002598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor","termid":"GO:0052890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4,4'-diapophytoene desaturase (4,4'-diaponeurosporene-forming)","secondary_identifiers":["GO:0102961","GO:0102225","GO:0102962","EC:1.3.8.2","MetaCyc:RXN-12224"],"synonyms":[{"name":"4,4'-diapo-zeta-carotene desaturase activity","type":"narrow"},{"name":"4,4'-diaponeurosporene desaturase activity","type":"narrow"},{"name":"4,4'-diapophytoene desaturase activity","type":"broad"},{"name":"4,4'-diapophytofluene desaturase activity","type":"narrow"}],"termid":"GO:0102223"}


id: PBO:0064435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase 1","termid":"PBO:0064435"}


id: PBO:0041700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 6","termid":"PBO:0041700"}


id: MONDO:1011672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gestational disease affecting pregnant animals characterized by excessive accumulation of fluid within the allantoic cavity and associated with fetal and placental abnormalities and fetal mortality.","definition_xrefs":["PMID:27613513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, non-human animal","secondary_identifiers":["OMIA:002053"],"termid":"MONDO:1011672","xrefs":{"Monarch":{"xref_id":"1011672"}}}


id: GO:1990890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a netrin receptor.","definition_xrefs":["PMID:9126742","GOC:kmv","PMID:8861902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"netrin receptor binding","termid":"GO:1990890"}


id: GO:0042895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete antibiotic transmembrane transporter activity (obsolete GO:0042895)","synonyms":[{"name":"antibiotic transporter activity","type":"related"}],"termid":"GO:0042895"}


id: PBO:0009082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Cfh4 (predicted)","termid":"PBO:0009082"}


id: PBO:0042681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEBPB antisense RNA 1","termid":"PBO:0042681"}


id: PR:O60177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C23E6.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.02","synonyms":[{"name":"Spom972h-rrp2","type":"exact"}],"termid":"PR:O60177"}


id: PBO:0041112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binder of sperm protein homolog 1","termid":"PBO:0041112"}


id: MONDO:0011230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by benign depositions of calcium in the posterior longitudinal ligament. Signs and symptoms result from the compression of nerve roots and include motor and sensory disturbances in the lower and upper extremities, and pain in the neck and arms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ossification of the posterior longitudinal ligament of the spine","secondary_identifiers":["OMIM:602475","NANDO:1200371","MEDGEN:355447","DOID:0060887","MESH:C537143","SCTID:90448008","UMLS:C1865343","EFO:0005895","NCIT:C84975"],"synonyms":[{"name":"OPLL","type":"exact"},{"name":"ossification of Posterior longitudinal ligament","type":"exact"},{"name":"ossification of the POSTERIOR longitudinal ligament of spine","type":"related"}],"termid":"MONDO:0011230","xrefs":{"Monarch":{"xref_id":"0011230"}}}


id: GO:0004309
data:
  {"annotated_genes":["SJAG_00570","SJAG_01154","SJAG_03964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72317,73707,107116],"is_not":false,"summary":null,"term":"GO:0004309"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: polyphosphate(n) + H2O = polyphosphate(n-1) + phosphate.","definition_xrefs":["EC:3.6.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_01154":null,"SJAG_03964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"exopolyphosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:21528","MetaCyc:EXOPOLYPHOSPHATASE-RXN"],"synonyms":[{"name":"Gra-Pase activity","type":"related"},{"name":"acid phosphoanhydride phosphohydrolase activity","type":"related"},{"name":"exopolypase activity","type":"related"},{"name":"metaphosphatase activity","type":"broad"},{"name":"polyphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0004309","terms_by_termid":{"GO:0004309":null}}


id: PBO:0074550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 3","termid":"PBO:0074550"}


id: MOD:01098
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a naphthylalanine.","definition_xrefs":["DeltaMass:243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"naphthylalanine residue","termid":"MOD:01098"}


id: PBO:0041651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 1","termid":"PBO:0041651"}


id: MONDO:0019846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired central diabetes insipidus (acquired CDI) is a subtype of central diabetes insipidus (CDI), characterized by polyuria and polydipsia, due to an idiopathic or secondary decrease in vasopressin (AVP) production.","definition_xrefs":["Orphanet:95626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central diabetes insipidus","termid":"MONDO:0015790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired central diabetes insipidus","secondary_identifiers":["GARD:19291","ICD10CM:E23.2","icd11.foundation:1677009817","MEDGEN:1843437","UMLS:C5680256"],"synonyms":[{"name":"acquired CDI","type":"exact"},{"name":"acquired central diabetes insipidus","type":"exact"},{"name":"acquired neurogenic diabetes insipidus","type":"exact"}],"termid":"MONDO:0019846","xrefs":{"Monarch":{"xref_id":"0019846"}}}


id: SO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_feature with an extent of zero.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_feature","termid":"SO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction","synonyms":[{"name":"boundary","type":"exact"},{"name":"breakpoint","type":"exact"}],"termid":"SO:0000699"}


id: PBO:0045464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D1","termid":"PBO:0045464"}


id: MONDO:1011403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperadrenocorticism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperadrenocorticism, non-human animal","secondary_identifiers":["OMIA:000494"],"termid":"MONDO:1011403","xrefs":{"Monarch":{"xref_id":"1011403"}}}


id: GO:0036075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ossification that requires the replacement of a preexisting tissue prior to bone tissue formation.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"replacement ossification","synonyms":[{"name":"indirect ossification","type":"exact"}],"termid":"GO:0036075"}


id: MONDO:0010432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemostatic disorder characterized by a tendency to thrombosis that has X-linked recessive inheritance, and can be caused by a gain-of-function mutation in the gene encoding factor IX (F9).","definition_xrefs":["OMIM:300807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombophilia","termid":"MONDO:0100240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombophilia, X-linked, due to factor 9 defect","secondary_identifiers":["DOID:0111899","MEDGEN:411730","MESH:C567581","UMLS:C2749016"],"synonyms":[{"name":"THPH8","type":"related"},{"name":"deep Venous thrombosis, protection against","type":"related"},{"name":"deep venous thrombosis, protection against, X-linked recessive","type":"exact"},{"name":"thrombophilia 8, X-linked, due to factor IX defect, X-linked recessive","type":"exact"},{"name":"thrombophilia, X-linked, due to factor 9 defect","type":"exact"},{"name":"thrombophilia, X-linked, due to factor IX defect","type":"exact"}],"termid":"MONDO:0010432","xrefs":{"Monarch":{"xref_id":"0010432"}}}


id: PBO:0046103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 6","termid":"PBO:0046103"}


id: GO:1901366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of funalenone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"funalenone metabolic process","termid":"GO:1901364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"funalenone biosynthetic process","synonyms":[{"name":"funalenone anabolism","type":"exact"},{"name":"funalenone biosynthesis","type":"exact"},{"name":"funalenone formation","type":"exact"},{"name":"funalenone synthesis","type":"exact"}],"termid":"GO:1901366"}


id: FYPO:0003671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ATP binding","termid":"FYPO:0003671"}


id: PBO:0081867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 805","termid":"PBO:0081867"}


id: GO:0051316
data:
  {"annotated_genes":["SJAG_00678","SJAG_03327","SJAG_03217","SJAG_04076","SJAG_01211","SJAG_05220","SJAG_02346","SJAG_03926","SJAG_03989","SJAG_03437","SJAG_04508","SJAG_00418","SJAG_02814","SJAG_00794","SJAG_01371","SJAG_00918","SJAG_05266","SJAG_01775","SJAG_02731","SJAG_01837","SJAG_03220","SJAG_01278","SJAG_01805","SJAG_03683","SJAG_05319","SJAG_01224"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89677,95674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051456"},{"annotations":[118667],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"},{"annotations":[111091,97422,112313,116075,107397,118905,115200,109759,100502,103235,90965,97176,111845,92811,104336,109440,112269,102413,110834,91572,99780,95655,117909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00678":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04508":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0051317"],"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiotic chromosome segregation","type":"related"},{"name":"attachment of spindle microtubules to meiotic chromosome","type":"exact"}],"termid":"GO:0051316","terms_by_termid":{"GO:0051455":null,"GO:0051456":null,"GO:1904967":null}}


id: GO:0046920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->3) linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-(1->3)-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9605644","Reactome:R-HSA-9603984","Reactome:R-HSA-9605609","Reactome:R-HSA-9605682"],"synonyms":[{"name":"alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:0046920"}


id: GO:0071234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylalanine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"response to phenylalanine","termid":"GO:0080053"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to phenylalanine","termid":"GO:0071234"}


id: PBO:0001683
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Rhp57 independently of Swi5","termid":"PBO:0001683"}


id: GO:0061426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter and activates or increases the frequency, rate or extent of sulfite transport.","definition_xrefs":["PMID:10870099","GOC:dph","PMID:10234785"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061426)","termid":"GO:0061426"}


id: MONDO:0014319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any renal agenesis in which the cause of the disease is a mutation in the FGF20 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal agenesis","termid":"MONDO:0018470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypodysplasia/aplasia 2","secondary_identifiers":["UMLS:C3810359","MEDGEN:816689","OMIM:615721"],"synonyms":[{"name":"FGF20 renal agenesis (disease)","type":"exact"},{"name":"RHDA2","type":"related"},{"name":"renal agenesis (disease) caused by mutation in FGF20","type":"exact"},{"name":"renal hypodysplasia/aplasia 2","type":"exact"},{"name":"renal hypodysplasia/aplasia type 2","type":"exact"}],"termid":"MONDO:0014319","xrefs":{"Monarch":{"xref_id":"0014319"}}}


id: PBO:0004009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN component Cdc14","termid":"PBO:0004009"}


id: GO:1900943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900940"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900941"},{"relation_name":"positively_regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"activation of (Z)-nonadeca-1,14-diene anabolism","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene biosynthesis","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene formation","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene synthesis","type":"narrow"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900943"}


id: MONDO:0002761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly differentiated variant of cervical squamous cell carcinoma characterized by the presence of a warty surface and stromal invasion with pushing borders. The malignant cells have abundant cytoplasm and minimal nuclear atypia. Koilocytosis is not present.","definition_xrefs":["NCIT:C40190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"},{"relation_name":"is_a","term_name":"cervical squamous cell carcinoma","termid":"MONDO:0006143"},{"relation_name":"is_a","term_name":"papillary carcinoma of the cervix uteri","termid":"MONDO:0016285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical verrucous carcinoma","secondary_identifiers":["DOID:3743","MEDGEN:275713","UMLS:C1516435"],"synonyms":[{"name":"cervical verrucous carcinoma","type":"exact"},{"name":"uterine cervix verrucous carcinoma","type":"exact"}],"termid":"MONDO:0002761","xrefs":{"Monarch":{"xref_id":"0002761"}}}


id: MONDO:0007901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"levator-medial rectus synkinesis","secondary_identifiers":["MEDGEN:320592","MESH:C563625","OMIM:151610","UMLS:C1835403"],"synonyms":[{"name":"levator-medial rectus synkinesis","type":"exact"},{"name":"oculomotor-levator synkinesis","type":"related"}],"termid":"MONDO:0007901","xrefs":{"Monarch":{"xref_id":"0007901"}}}


id: PBO:0030013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_Calcofluor_White","termid":"PBO:0030013"}


id: PBO:0053372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 297","termid":"PBO:0053372"}


id: PBO:0087498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Elongator complex; Elongator is required for modification of wobble nucleosides in tRNA; exhibits histone acetyltransferase activity that is directed to histones H3 and H4; disruption confers resistance to K. lactis zymotoxin; human homolog ELP3 can partially complement yeast elp3 null mutant","termid":"PBO:0087498"}


id: GO:0103103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 9-methylthiononylhydroximate = 8-methylthiooctyldesulfoglucosinolate + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose: 9-methylthiononylhydroximate S-glucosyltransferase activity (obsolete GO:0103103)","termid":"GO:0103103"}


id: GO:0031016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating hormones.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas development","secondary_identifiers":["Wikipedia:Pancreas"],"termid":"GO:0031016"}


id: PBO:0005803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit YmL33 (predicted)","termid":"PBO:0005803"}


id: GO:0071641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of macrophage inflammatory protein 1 alpha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of macrophage inflammatory protein 1 alpha production","termid":"GO:0071640"},{"relation_name":"negatively_regulates","term_name":"macrophage inflammatory protein-1 alpha production","termid":"GO:0071608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of macrophage inflammatory protein 1 alpha production","synonyms":[{"name":"negative regulation of CCL3 production","type":"exact"},{"name":"negative regulation of MIP-1a production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"negative regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071641"}


id: MOD:01637
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-glutamine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamine removal","termid":"MOD:01637"}


id: GO:0050583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + H2 = NADPH + H+.","definition_xrefs":["EC:1.12.1.3","MetaCyc:1.12.1.3-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","termid":"GO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydrogen dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:18637"],"synonyms":[{"name":"NADP-linked hydrogenase activity","type":"related"},{"name":"NADP-reducing hydrogenase activity","type":"related"},{"name":"hydrogen:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050583"}


id: PBO:0000073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transmembrane helices","termid":"PBO:0000073"}


id: PBO:0011997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase subunit A (predicted)","termid":"PBO:0011997"}


id: GO:1904523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA amplification.","definition_xrefs":["GOC:TermGenie","PMID:26195783","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"regulates","term_name":"DNA amplification","termid":"GO:0006277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA amplification","termid":"GO:1904523"}


id: PBO:0040903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 7","termid":"PBO:0040903"}


id: GO:0019625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide, into cyanuric acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrazine catabolic process","termid":"GO:0019381"},{"relation_name":"is_a","term_name":"cyanuric acid metabolic process","termid":"GO:0042199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrazine catabolic process to cyanuric acid","synonyms":[{"name":"atrazine breakdown to cyanuric acid","type":"exact"},{"name":"atrazine degradation to cyanuric acid","type":"exact"}],"termid":"GO:0019625"}


id: PBO:0089009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid elongase Elo2","termid":"PBO:0089009"}


id: GO:0010745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process in which a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:add","GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage derived foam cell differentiation","termid":"GO:0010743"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"negatively_regulates","term_name":"macrophage derived foam cell differentiation","termid":"GO:0010742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage derived foam cell differentiation","termid":"GO:0010745"}


id: GO:0047085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyphenylacetonitrile + H+ + NADPH + O2 = 4-hydroxymandelonitrile + H2O + NADP+.","definition_xrefs":["RHEA:50732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydroxyphenylacetonitrile 2-monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.42-RXN","KEGG_REACTION:R02708"],"synonyms":[{"name":"4-hydroxyphenylacetonitrile hydroxylase activity","type":"exact"},{"name":"4-hydroxyphenylacetonitrile monooxygenase activity","type":"exact"},{"name":"4-hydroxyphenylacetonitrile,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"exact"}],"termid":"GO:0047085"}


id: PBO:0069114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 363, pseudogene","termid":"PBO:0069114"}


id: PBO:0029244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_caffeine","termid":"PBO:0029244"}


id: GO:0034844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: naphthyl-2-methyl-succinate + succinyl-CoA = naphthyl-2-methyl-succinyl-CoA + succinate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthyl-2-methyl-succinate CoA-transferase activity (obsolete GO:0034844)","termid":"GO:0034844"}


id: GO:1990656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering process in which t-SNARES are localized to distinct domains in the cell membrane. t-SNAREs are cell surface proteins which are part of secretory microdomain assemblies.","definition_xrefs":["PMID:22528485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"t-SNARE clustering","termid":"GO:1990656"}


id: FYPO:0002274
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121151,121159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[121158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[121584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[121154,121150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[121489],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[121147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[121144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is abnormal. A protein metabolic process is a series of chemical reactions and pathways involving a specific protein.","definition_xrefs":["GO:0019538","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03940":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":7,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein metabolic process","references_by_uniquename":{"PMID:26774782":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697","SJAG_04551","SJAG_03940","SJAG_00610","SJAG_01787","SJAG_02592"],"single_locus_genotype_uniquenames":["Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","gms1delta","sty1delta","pck1delta","pck2delta","nem2delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cellular protein metabolic process","type":"exact"},{"name":"abnormal protein metabolism","type":"exact"}],"termid":"FYPO:0002274","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0003727":null,"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: MONDO:0000710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease characterized by inflammation located in stomach and located in duodenum, has symptom nausea, has symptom vomiting, has symptom weight loss and has symptom loss of appetite.","definition_xrefs":["DOID:0060191","PMID:12769447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenitis","termid":"MONDO:0004627"},{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"},{"relation_name":"is_a","term_name":"small bowel Crohn disease","termid":"MONDO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"gastroduodenal Crohn disease","secondary_identifiers":["MEDGEN:1613956","UMLS:C4544979"],"synonyms":[{"name":"gastroduodenal Crohn's disease","type":"exact"},{"name":"upper GI Crohn's disease","type":"exact"}],"termid":"MONDO:0000710","xrefs":{"Monarch":{"xref_id":"0000710"}}}


id: GO:0016151
data:
  {"annotated_genes":["SJAG_00309","SJAG_04679","SJAG_02766","SJAG_05338","SJAG_04896"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59083,59474,59655,66715,66748],"is_not":false,"summary":null,"term":"GO:0016151"}]},"cv_name":"molecular_function","definition":"Binding to a nickel (Ni) cation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_02766":null,"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"nickel cation binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null},"synonyms":[{"name":"Ni binding","type":"exact"},{"name":"nickel binding","type":"exact"}],"termid":"GO:0016151","terms_by_termid":{"GO:0016151":null}}


id: FYPO:0003171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell has two nuclei and the mitotic cell cycle is arrested after the septum has formed, but before cells have separated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"has_part","term_name":"monoseptate","termid":"FYPO:0001225"},{"relation_name":"has_part","term_name":"mitotic cell cycle arrest before cell separation","termid":"FYPO:0002888"},{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"mitotic cell cycle arrest before cell separation","termid":"FYPO:0002888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"binucleate monoseptate cell with mitotic cell cycle arrest before cell separation","synonyms":[{"name":"binucleate monoseptate cell with cell cycle arrest before cell separation during mitotic cell cycle","type":"related"},{"name":"binucleate monoseptate cell with mitotic cell cycle arrest before cell separation after cytokinesis","type":"exact"},{"name":"binucleate monoseptate cell with mitotic cell cycle arrest before cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"binucleate monoseptate cell with mitotic cell cycle arrest before cytokinetic cell separation","type":"exact"},{"name":"mitotic cell cycle arrest before cell separation with binucleate monoseptate cell","type":"exact"},{"name":"nuclear division arrest with septation (normal cell length)","type":"exact"}],"termid":"FYPO:0003171"}


id: MONDO:0009531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lip prints (obsolete MONDO:0009531)","secondary_identifiers":["OMIM:247150"],"synonyms":[{"name":"lip prints","type":"exact"}],"termid":"MONDO:0009531","xrefs":{"Monarch":{"xref_id":"0009531"}}}


id: PBO:0085900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in mitochondrial DNA maintenance; required for slowed DNA synthesis-induced filamentous growth","termid":"PBO:0085900"}


id: PBO:0116611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3137","termid":"PBO:0116611"}


id: PBO:0081171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 9 pseudogene 1","termid":"PBO:0081171"}


id: PBO:0091726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, expressed in late meiosis and quiescence","termid":"PBO:0091726"}


id: MONDO:0044337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm characterized by the presence of atypical mesenchymal-stromal cells. Representative examples include endometrial stromal sarcoma and prostate stromal sarcoma.","definition_xrefs":["NCIT:C6926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"stromal sarcoma","secondary_identifiers":["MEDGEN:235091","UMLS:C1370723","ICDO:8935/3"],"synonyms":[{"name":"stromal sarcoma","type":"exact"},{"name":"stromal sarcoma, malignant","type":"exact"},{"name":"stromal tumor, malignant","type":"exact"}],"termid":"MONDO:0044337","xrefs":{"Monarch":{"xref_id":"0044337"}}}


id: PBO:0061135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 1 pseudogene 1","termid":"PBO:0061135"}


id: PBO:0034178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ubiquitinates","termid":"PBO:0034178"}


id: MONDO:0019994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 13 is an uniparental disomy of maternal origin that most likely do not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only mother is a carrier.","definition_xrefs":["Orphanet:97678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 13 disorder","termid":"MONDO:0700020"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 13","secondary_identifiers":["GARD:19382","UMLS:C4722325","MEDGEN:1656812","icd11.foundation:729188840"],"synonyms":[{"name":"UPD(13)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 13","type":"exact"}],"termid":"MONDO:0019994","xrefs":{"Monarch":{"xref_id":"0019994"}}}


id: PBO:0088940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and type II fatty acid synthase component","termid":"PBO:0088940"}


id: RO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in","termid":"RO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"role_of","termid":"RO:0000081"}


id: GO:0009879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or a part of an organism such that it is symmetric around a central axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"},{"relation_name":"part_of","term_name":"radial pattern formation","termid":"GO:0009956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of radial symmetry","synonyms":[{"name":"determination of radial asymmetry","type":"exact"}],"termid":"GO:0009879"}


id: PBO:0053515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 504","termid":"PBO:0053515"}


id: MONDO:0009257
data:
  {"annotated_genes":["SJAG_03818","SJAG_02951","SJAG_01784"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87847,87848,87849],"is_not":false,"summary":null,"term":"MONDO:0009257"}]},"cv_name":"mondo","definition":"Galactose epimerase deficiency is a very rare, moderate to severe form of galactosemia characterized by moderate to severe signs of impaired galactose metabolism.","definition_xrefs":["Orphanet:79238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosemia","termid":"MONDO:0018116"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02951":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"galactose epimerase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5392","UMLS:C0751161","MEDGEN:199598","NANDO:2200534","SCTID:8849004","DOID:0111458","OMIM:230350"],"synonyms":[{"name":"GALE deficiency","type":"exact"},{"name":"GALE-D","type":"exact"},{"name":"Gale deficiency","type":"related"},{"name":"UDP-galactose-4-epimerase deficiency","type":"exact"},{"name":"epimerase deficiency galactosemia","type":"exact"},{"name":"galactose epimerase deficiency","type":"exact"},{"name":"galactosemia 3","type":"related"},{"name":"galactosemia type 3","type":"exact"},{"name":"uridine diphosphate galactose-4-epimerase deficiency","type":"exact"}],"termid":"MONDO:0009257","terms_by_termid":{"MONDO:0009257":null},"xrefs":{"Monarch":{"xref_id":"0009257"}}}


id: SO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_array_member","synonyms":[{"name":"gene array member","type":"exact"}],"termid":"SO:0000081"}


id: PBO:0031832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_morphology","termid":"PBO:0031832"}


id: GO:0018788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: atrazine + H2O = chloride + H+ + hydroxyatrazine.","definition_xrefs":["RHEA:11312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"atrazine chlorohydrolase activity","secondary_identifiers":["KEGG_REACTION:R05558","UM-BBD_reactionID:r0113","MetaCyc:3.8.1.8-RXN","EC:3.8.1.8"],"synonyms":[{"name":"AtzA","type":"related"}],"termid":"GO:0018788"}


id: MONDO:0015480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma of superior eyelid is a rare developmental defect during embryogenesis characterized by a typically unilateral, partial or full-thickness, variably sized defect of the superior eyelid, ranging from a small notch to complete absence of the entire lid, which is commonly triangular in shape (with base at eyelid margin) and located on the medial third of the lid. It can occur isolated, associated with other anomalies (e.g. ocular/orbital and facial), or as part of a syndrome.","definition_xrefs":["Orphanet:155884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"},{"relation_name":"is_a","term_name":"coloboma of eyelid","termid":"MONDO:0020357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma of superior eyelid","secondary_identifiers":["GARD:19977","SCTID:763132003","UMLS:C1863872","MEDGEN:350283"],"synonyms":[{"name":"superior palpebral coloboma","type":"exact"}],"termid":"MONDO:0015480","xrefs":{"Monarch":{"xref_id":"0015480"}}}


id: PR:Q9P7E1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7E1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein P4H10.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.07","synonyms":[{"name":"Spom972h-SPBP4H10.07","type":"exact"}],"termid":"PR:Q9P7E1"}


id: MONDO:0020414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"aortic arch defects","termid":"MONDO:0015236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent fifth aortic arch","secondary_identifiers":["Orphanet:99076","UMLS:C0345066","icd11.foundation:82536098","GARD:19636","MEDGEN:576728"],"termid":"MONDO:0020414","xrefs":{"Monarch":{"xref_id":"0020414"}}}


id: GO:0042428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"},{"relation_name":"is_a","term_name":"ammonium ion metabolic process","termid":"GO:0097164"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serotonin metabolic process","synonyms":[{"name":"serotonin metabolism","type":"exact"}],"termid":"GO:0042428"}


id: GO:0004731
data:
  {"annotated_genes":["SJAG_01359","SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80903],"is_not":false,"summary":null,"term":"GO:0004731"},{"annotations":[79581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017061"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01359":null,"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"purine-nucleoside phosphorylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PNP-RXN","Reactome:R-HSA-74242","Reactome:R-HSA-74249","RHEA:19805","Reactome:R-HSA-112034","Reactome:R-HSA-9755044","Reactome:R-HSA-112033","Reactome:R-HSA-9735775","Reactome:R-HSA-9735789"],"synonyms":[{"name":"PNPase activity","type":"related"},{"name":"PUNPI","type":"related"},{"name":"PUNPII","type":"related"},{"name":"inosine phosphorylase activity","type":"narrow"},{"name":"inosine-guanosine phosphorylase activity","type":"related"},{"name":"purine deoxynucleoside phosphorylase activity","type":"related"},{"name":"purine deoxyribonucleoside phosphorylase activity","type":"related"},{"name":"purine nucleoside phosphorylase activity","type":"related"},{"name":"purine ribonucleoside phosphorylase activity","type":"related"},{"name":"purine-nucleoside:phosphate ribosyltransferase activity","type":"related"}],"termid":"GO:0004731","terms_by_termid":{"GO:0004731":null,"GO:0017061":null}}


id: FYPO:0006387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle pole body organization is abnormal. Mitotic spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the mitotic spindle pole body (SPB).","definition_xrefs":["GO:1905047","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body organization","synonyms":[{"name":"abnormal mitotic SPB organization","type":"exact"},{"name":"abnormal mitotic spindle pole body organisation","type":"exact"}],"termid":"FYPO:0006387"}


id: GO:0045030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity, activated by UTP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled pyrimidinergic nucleotide receptor activity","termid":"GO:0071553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled UTP receptor activity","secondary_identifiers":["GO:0015065"],"synonyms":[{"name":"UTP-activated nucleotide receptor activity","type":"broad"},{"name":"purinoceptor type U","type":"broad"},{"name":"uridine nucleotide receptor activity","type":"broad"}],"termid":"GO:0045030"}


id: PBO:0057465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR583 host gene","termid":"PBO:0057465"}


id: PR:Q9UTC5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YggC that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase C227.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.14","secondary_identifiers":["UniProtKB:Q9UTC5"],"synonyms":[{"name":"Spom972h-yggC","type":"exact"}],"termid":"PR:Q9UTC5"}


id: PBO:0018022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic septin Spn7","termid":"PBO:0018022"}


id: GO:0102422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: curcumin 4'-O-beta-D-gentiotrioside + UDP-alpha-D-glucose = curcumin 4'-O-beta-D-gentiotetraside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete curcumin-4'-O-beta-D-gentiotrioside 1,6-glucosyltransferase activity (obsolete GO:0102422)","termid":"GO:0102422"}


id: PR:P56329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2 subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23001:SF3","OMA:SCHPO01020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.04c","secondary_identifiers":["UniProtKB:P56329"],"synonyms":[{"name":"Spom972h-EIF2S2","type":"exact"},{"name":"eIF-2-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56329"}


id: PBO:0057151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 299","termid":"PBO:0057151"}


id: GO:0044559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts the activity of a voltage-gated potassium channel in another organism via the action of a venom.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of ion channel activity","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of voltage-gated potassium channel activity","synonyms":[{"name":"envenomation resulting in modulation of voltage-gated potassium channel activity in another organism","type":"exact"},{"name":"envenomation resulting in modulation of voltage-gated potassium channel activity in other organism","type":"exact"}],"termid":"GO:0044559"}


id: MONDO:0018344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete periodic paralysis with transient compartment-like syndrome (obsolete MONDO:0018344)","secondary_identifiers":["Orphanet:397755"],"termid":"MONDO:0018344","xrefs":{"Monarch":{"xref_id":"0018344"}}}


id: GO:1904371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to actin cortical patch.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to actin cortical patch","termid":"GO:1904370"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell cortex","termid":"GO:1904777"},{"relation_name":"negatively_regulates","term_name":"protein localization to actin cortical patch","termid":"GO:0044379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to actin cortical patch","synonyms":[{"name":"down regulation of protein localisation to actin cortical patch","type":"exact"},{"name":"down regulation of protein localization to actin cortical patch","type":"exact"},{"name":"down-regulation of protein localisation to actin cortical patch","type":"exact"},{"name":"down-regulation of protein localization to actin cortical patch","type":"exact"},{"name":"downregulation of protein localisation to actin cortical patch","type":"exact"},{"name":"downregulation of protein localization to actin cortical patch","type":"exact"},{"name":"inhibition of protein localisation to actin cortical patch","type":"narrow"},{"name":"inhibition of protein localization to actin cortical patch","type":"narrow"},{"name":"negative regulation of protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:1904371"}


id: PBO:0071176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 17","termid":"PBO:0071176"}


id: GO:0150177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylethanolamine metabolic process.","definition_xrefs":["PMID:30074985","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylethanolamine metabolic process","termid":"GO:0150175"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"phosphatidylethanolamine metabolic process","termid":"GO:0046337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylethanolamine metabolic process","termid":"GO:0150177"}


id: PBO:0026894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_nitrogen_starvation","termid":"PBO:0026894"}


id: PBO:0075653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splA/ryanodine receptor domain and SOCS box containing 2","termid":"PBO:0075653"}


id: MONDO:0018248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-seizures-macrocephaly-obesity syndrome is a rare syndromic obesity due to complex chromosomal rearrangement characterized by development delay and intellectual disability, childhood-onset obesity, seizures, poor coordination and broad-based gait, macrocephaly and mild dysmorphic features (such as narrow palpebral fissures, malar hypoplasia and thin upper lips), eczema, ocular abnormalities and a social personality.","definition_xrefs":["Orphanet:369950"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-seizures-macrocephaly-obesity syndrome","secondary_identifiers":["GARD:21583","MEDGEN:1650833","UMLS:C4749455"],"synonyms":[{"name":"Der(8)t(8;12)","type":"exact"}],"termid":"MONDO:0018248","xrefs":{"Monarch":{"xref_id":"0018248"}}}


id: PBO:0030768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_stress_during_vegetative_growth","termid":"PBO:0030768"}


id: PBO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heavy metal ion homeostasis protein (predicted)","termid":"PBO:0002076"}


id: GO:2000315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0045743"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:2000313"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"positive regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000315"}


id: PBO:0074483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 2","termid":"PBO:0074483"}


id: PBO:0030026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_agglutination","termid":"PBO:0030026"}


id: MONDO:0006748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A variant of epilepsy characterized by continuous focal jerking of a body part over a period of hours, days, or even years without spreading to other body regions. Contractions may be aggravated by movement and are reduced, but not abolished during sleep. electroencephalography demonstrates epileptiform (spike and wave) discharges over the hemisphere opposite to the affected limb in most instances. The repetitive movements may originate from the cerebral cortex or from subcortical structures (e.g., brain stem; basal ganglia). This condition is associated with Russian Spring and Summer encephalitis; Rasmussen syndrome; multiple sclerosis; diabetes mellitus; brain neoplasms; and cerebrovascular disorders.","definition_xrefs":["PMID:8800935","MESH:D017036","PMID:7681771"],"gene_count":0,"genotype_count":0,"name":"obsolete epilepsia partialis continua (obsolete MONDO:0006748)","secondary_identifiers":["EFO:1000924","ICD9:345.7","DOID:11349","MEDGEN:39303","SCTID:241006","MedDRA:10015034","ICD9:345.70","UMLS:C0085543","icd11.foundation:669338526"],"termid":"MONDO:0006748","xrefs":{"Monarch":{"xref_id":"0006748"}}}


id: PBO:0081527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF436 antisense RNA 1","termid":"PBO:0081527"}


id: MONDO:0004551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of a congenital diverticulum of the lower intestine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine diverticulitis","termid":"MONDO:0001229"},{"relation_name":"is_a","term_name":"enteritis","termid":"MONDO:0043579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Meckel diverticulitis","secondary_identifiers":["NCIT:C27300","MEDGEN:75634","DOID:8408","SCTID:48241004","icd11.foundation:543494453","UMLS:C0267497"],"synonyms":[{"name":"Meckel diverticulitis","type":"exact"},{"name":"Meckel's diverticulitis","type":"related"},{"name":"Meckel's diverticulum inflammation","type":"exact"},{"name":"inflammation of Meckel's diverticulum","type":"exact"}],"termid":"MONDO:0004551","xrefs":{"Monarch":{"xref_id":"0004551"}}}


id: PBO:0082994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic L-asparaginase, involved in asparagine catabolism; catalyzes hydrolysis of L-asparagine to aspartic acid and ammonia; important enzyme for the treatment of acute lymphoblastic leukemia; has low glutaminase activity and dependence; synthesized constitutively","termid":"PBO:0082994"}


id: PR:Q9UQY2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11599:SF8","OMA:SCHPO01989","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.06","secondary_identifiers":["UniProtKB:Q9UQY2"],"synonyms":[{"name":"Spom972h-PSMB1","type":"exact"}],"termid":"PR:Q9UQY2"}


id: FYPO:0000810
data:
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id: PBO:0074572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 28","termid":"PBO:0074572"}


id: MOD:01823
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cysTMT6plex-126 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01823"}


id: GO:0001840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.","definition_xrefs":["ISBN:0878932437","ISBN:0878932585","GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate development","termid":"GO:0001840"}


id: MONDO:0017815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of porencephaly that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porencephaly","termid":"MONDO:0017410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired porencephaly","secondary_identifiers":["MEDGEN:508833","SCTID:38837006","UMLS:C0151860","Orphanet:314697","GARD:21386"],"synonyms":[{"name":"acquired porencephaly","type":"exact"}],"termid":"MONDO:0017815","xrefs":{"Monarch":{"xref_id":"0017815"}}}


id: FYPO:0004980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the equatorial microtubule organizing center is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to cortical microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000935"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to eMTOC during vegetative growth","synonyms":[{"name":"decreased protein localisation to eMTOC during vegetative growth","type":"exact"},{"name":"decreased protein localization to eMTOC during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to equatorial microtubule organizing center during vegetative growth","type":"exact"},{"name":"decreased protein localization to mitotic eMTOC","type":"related"},{"name":"reduced protein localization to eMTOC during vegetative growth","type":"exact"}],"termid":"FYPO:0004980"}


id: PBO:0042076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 144C, pseudogene","termid":"PBO:0042076"}


id: PBO:0058179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4473","termid":"PBO:0058179"}


id: PBO:0030365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_vegetative_cell,_septa_grouped","termid":"PBO:0030365"}


id: PBO:0048910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member E, pseudogene","termid":"PBO:0048910"}


id: GO:0086070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between an SA node cardiomyocyte and its surroundings that contributes to the process of the SA node cardiomyocyte communicating with an atrial cardiomyocyte in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"SA node cell to atrial cardiac muscle cell communication","synonyms":[{"name":"SA node cardiac muscle cell to atrial cardiac muscle cell communication","type":"exact"},{"name":"SA node cardiomyocyte to atrial cardiomyocyte communication","type":"exact"},{"name":"SAN cardiomyocyte to atrial cardiomyocyte communication","type":"exact"},{"name":"sinoatrial node cardiomyocyte to atrial cardiomyocyte communication","type":"exact"},{"name":"sinus node cardiomyocyte to atrial cardiomyocyte communication","type":"narrow"}],"termid":"GO:0086070"}


id: PBO:0045479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 1","termid":"PBO:0045479"}


id: GO:0009123
data:
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id: PBO:0030730
data:
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id: PBO:0078848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 4","termid":"PBO:0078848"}


id: PBO:0084372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipoate-protein ligase; octanoyl-CoA: protein transferase required along with Lip2 and Lip5 for lipoylation of Lat1p and Kgd2p; similar to E. coli LplA; null mutant displays reduced frequency of mitochondrial genome loss","termid":"PBO:0084372"}


id: PBO:0075217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein 13","termid":"PBO:0075217"}


id: GO:0102488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dTTP + 2 H2O = dTMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dTTP phosphohydrolase activity (obsolete GO:0102488)","termid":"GO:0102488"}


id: PBO:0005181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35a","termid":"PBO:0005181"}


id: PBO:0054464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1863","termid":"PBO:0054464"}


id: PBO:0034311
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_via_type_II_bouton_to","termid":"PBO:0034311"}


id: PBO:0069591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 865, pseudogene","termid":"PBO:0069591"}


id: SO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds in which: the main-chain NH of residue(i) is H-bonded to the main-chain CO of residue(i+5), the main-chain CO of residue i is H-bonded to the main-chain NH of residue(i+4), these loops have an RL nest at residues i+3 and i+4.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_bulge_loop","termid":"SO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop_six","secondary_identifiers":["BS:00211"],"synonyms":[{"name":"beta bulge loop six","type":"exact"}],"termid":"SO:0001110"}


id: PBO:0063034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK1 interacting protein 1","termid":"PBO:0063034"}


id: MONDO:1010419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narcolepsy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, non-human animal","termid":"MONDO:1010003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy, domestic cat","secondary_identifiers":["OMIA:000703-9685"],"termid":"MONDO:1010419","xrefs":{"Monarch":{"xref_id":"1010419"}}}


id: PBO:0050161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 17","termid":"PBO:0050161"}


id: GO:0045605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"negative regulation of epidermis development","termid":"GO:0045683"},{"relation_name":"negatively_regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermal cell differentiation","synonyms":[{"name":"down regulation of epidermal cell differentiation","type":"exact"},{"name":"down-regulation of epidermal cell differentiation","type":"exact"},{"name":"downregulation of epidermal cell differentiation","type":"exact"},{"name":"inhibition of epidermal cell differentiation","type":"narrow"},{"name":"negative regulation of hypodermal cell differentiation","type":"related"}],"termid":"GO:0045605"}


id: GO:1904583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polyamine macromolecule stimulus.","definition_xrefs":["GOC:TermGenie","PMID:20805360","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to polyamine macromolecule","synonyms":[{"name":"response to polyamine","type":"exact"},{"name":"response to polyamines","type":"exact"}],"termid":"GO:1904583"}


id: FYPO:0001546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to zinc ion","synonyms":[{"name":"decreased RNA accumulation during cellular response to zinc ion","type":"related"},{"name":"decreased RNA level during cellular response to zinc","type":"exact"},{"name":"decreased RNA level during cellular response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to zinc ion during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to zinc ion","type":"narrow"},{"name":"decreased transcript level during cellular response to zinc ion","type":"exact"},{"name":"reduced RNA level during cellular response to zinc ion","type":"exact"}],"termid":"FYPO:0001546"}


id: GO:0040004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attaching of a collagen and cuticulin-based cuticle to the epithelium underlying it. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, collagen and cuticulin-based cuticle","termid":"GO:0018996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collagen and cuticulin-based cuticle attachment to epithelium","synonyms":[{"name":"cuticular attachment to epithelium","type":"broad"}],"termid":"GO:0040004"}


id: MONDO:0017244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoxanthomatous diffuse cutaneous mastocytosis (PDCM) is a rare form of diffuse cutaneous mastocytosis (DCM) characterized by yellow-orange infiltrated and xanthogranuloma-like lesions with only limited blistering.","definition_xrefs":["Orphanet:280794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse cutaneous mastocytosis","termid":"MONDO:0019315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pseudoxanthomatous diffuse cutaneous mastocytosis","secondary_identifiers":["UMLS:C5679949","GARD:21089","MEDGEN:1842453"],"synonyms":[{"name":"Pseudoxanthomatous DCM","type":"exact"},{"name":"infiltrative small vesicular DCM","type":"exact"},{"name":"infiltrative small vesicular diffuse cutaneous mastocytosis","type":"exact"}],"termid":"MONDO:0017244","xrefs":{"Monarch":{"xref_id":"0017244"}}}


id: GO:0018323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of peptidyl-cysteine to form peptidyl-L-cysteine sulfinic acid.","definition_xrefs":["RESID:AA0262"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via L-cysteine sulfinic acid (obsolete GO:0018323)","synonyms":[{"name":"enzyme active site formation via L-cysteine sulphinic acid","type":"exact"}],"termid":"GO:0018323"}


id: PBO:0079042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-4","termid":"PBO:0079042"}


id: PBO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacyl-tRNA hydrolase (predicted)","termid":"PBO:0001559"}


id: PBO:0001343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain protein (predicted)","termid":"PBO:0001343"}


id: PBO:0075705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 1","termid":"PBO:0075705"}


id: GO:0015988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons across a membrane and against an electrochemical gradient, using energy from a source such as ATP hydrolysis, light, or electron transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transport","termid":"GO:1902600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"energy coupled proton transmembrane transport, against electrochemical gradient","termid":"GO:0015988"}


id: GO:0035082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and organization of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements.","definition_xrefs":["GOC:jl","GOC:bf","GOC:cilia","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle formation","termid":"GO:0001578"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"axoneme assembly","secondary_identifiers":["GO:0035083","GO:0035084"],"synonyms":[{"name":"axoneme biogenesis","type":"related"},{"name":"ciliary axoneme assembly","type":"exact"},{"name":"cilium axoneme assembly","type":"exact"},{"name":"cilium axoneme biogenesis","type":"related"},{"name":"flagellar axoneme assembly","type":"exact"},{"name":"flagellum axoneme assembly","type":"exact"}],"termid":"GO:0035082"}


