# terms

id: PBO:0052203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ1 downstream neighbor","termid":"PBO:0052203"}


id: PBO:0062520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily L member 1 pseudogene","termid":"PBO:0062520"}


id: GO:0019543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionate, the anion derived from propionic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"},{"relation_name":"is_a","term_name":"short-chain fatty acid catabolic process","termid":"GO:0019626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"propionate catabolic process","synonyms":[{"name":"propionate breakdown","type":"exact"},{"name":"propionate catabolism","type":"exact"},{"name":"propionate degradation","type":"exact"}],"termid":"GO:0019543"}


id: MOD:00877
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"dimethyl pimelimidate modification from Unimod","definition_xrefs":["Unimod:455","URL:http://www.piercenet.com/files/0668ss5.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidoester crosslink dimethyl pimelimidate singly attached","synonyms":[{"name":"One end of crosslink attached, one end free","type":"related"},{"name":"Xlink:DMP-s","type":"related"}],"termid":"MOD:00877"}


id: GO:0070581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA-dependent DNA replication process in which a single-stranded DNA molecule is synthesized from a circular duplex template. Replication typically does not cease when one circumference has been replicated, but continues around the circumference several more times, producing a long single strand comprising multimers of the replicon.","definition_xrefs":["GOC:cb","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"rolling circle DNA replication","synonyms":[{"name":"rolling circle replication","type":"exact"}],"termid":"GO:0070581"}


id: PBO:0038801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 7","termid":"PBO:0038801"}


id: GO:0000750
data:
  {"annotated_genes":["SJAG_01345","SJAG_01978","SJAG_02923","SJAG_01718","SJAG_00990","SJAG_00993","SJAG_03340"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72447],"is_not":false,"summary":null,"term":"GO:0000750"},{"annotations":[95164],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[65792,91056,95165,98248,98917,108205],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"}]},"cv_name":"biological_process","definition":"A signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation with cellular fusion. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"},{"relation_name":"part_of","term_name":"response to pheromone triggering conjugation with cellular fusion","termid":"GO:0000749"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02923":null,"SJAG_03340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0000747","GO:0008150"],"is_obsolete":false,"name":"pheromone-dependent signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0007330","GO:0030454"],"synonyms":[{"name":"transduction of mating signal","type":"broad"}],"termid":"GO:0000750","terms_by_termid":{"GO:0000750":null,"GO:0071507":null,"GO:0090029":null}}


id: GO:0017003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of heme and a protein.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-tetrapyrrole linkage","termid":"GO:0017006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-heme linkage","synonyms":[{"name":"protein-haem linkage","type":"exact"}],"termid":"GO:0017003"}


id: MONDO:0013304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 von Willebrand disease (type 2 VWD) is a form of VWD characterized by a bleeding disorder associated with a qualitative deficiency and functional anomalies of the Willebrand factor (von Willebrand factor; VWF).","definition_xrefs":["Orphanet:166081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary von Willebrand disease","termid":"MONDO:0019565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease 2","secondary_identifiers":["GARD:17020","SCTID:128107007","UMLS:C1264040","DOID:0060574","MEDGEN:224736","MESH:D056728","OMIM:613554"],"synonyms":[{"name":"VON WILLEBRAND disease, type 2","type":"related"},{"name":"VWD type 2","type":"exact"},{"name":"VWD, type 2","type":"related"},{"name":"VWD2","type":"exact"},{"name":"Von Willebrand disease, type 2","type":"related"},{"name":"Von Willebrand disease, type 2A","type":"related"},{"name":"Von Willebrand disease, type 2B","type":"related"},{"name":"Von Willebrand disease, type 2M","type":"related"},{"name":"Von Willebrand disease, type 2N","type":"related"},{"name":"von Willebrand disease 2","type":"exact"},{"name":"von Willebrand disease type 2","type":"exact"},{"name":"von Willebrand disease type II","type":"exact"},{"name":"von Willebrand disease, types 2A, 2B, 2M, and 2N","type":"exact"},{"name":"von Willebrand's disease type 2","type":"exact"},{"name":"von willebrand's disease 2","type":"exact"}],"termid":"MONDO:0013304","xrefs":{"Monarch":{"xref_id":"0013304"}}}


id: MOD:01569
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01569"}


id: GO:0009669
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sucrose(out) + monovalent cation(out) = sucrose(in) + monovalent cation(in).","definition_xrefs":["TC:2.A.2.-.-","GOC:jy","TC:2.A.2.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"sucrose transmembrane transporter activity","termid":"GO:0008515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sucrose:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"sucrose permease activity","type":"related"},{"name":"sucrose:cation symporter activity","type":"broad"},{"name":"sucrose:monovalent cation symporter activity","type":"exact"}],"termid":"GO:0009669","terms_by_termid":{"GO:0008506":null}}


id: GO:0052742
data:
  {"annotated_genes":["SJAG_01863","SJAG_04537","SJAG_05330","SJAG_00114","SJAG_00638","SJAG_01571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78279,73524,95068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004430"},{"annotations":[73309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016303"},{"annotations":[93686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052811"},{"annotations":[74395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000285"},{"annotations":[81444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016308"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a phosphatidylinositol = ADP + a phosphatidylinositol phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00638":null,"SJAG_01571":null,"SJAG_01863":null,"SJAG_04537":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1675773"],"synonyms":[{"name":"1-phosphatidylinositol kinase activity","type":"exact"}],"termid":"GO:0052742","terms_by_termid":{"GO:0000285":null,"GO:0004430":null,"GO:0016303":null,"GO:0016308":null,"GO:0052811":null}}


id: GO:0034177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 12 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 12 signaling pathway","termid":"GO:0034175"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 12 signaling pathway","termid":"GO:0034174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 12 signaling pathway","synonyms":[{"name":"positive regulation of TLR12 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 12 signalling pathway","type":"exact"}],"termid":"GO:0034177"}


id: MONDO:0024521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial abdominal aortic aneurysm","termid":"MONDO:0007031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial abdominal, 1","secondary_identifiers":["MEDGEN:339961","GARD:16491","OMIM:100070","UMLS:C1853365"],"synonyms":[{"name":"AAA1","type":"exact"},{"name":"abdominal aortic aneurysm","type":"related"},{"name":"aneurysm, abdominal aortic","type":"related"},{"name":"aortic aneurysm, familial abdominal 1","type":"exact"},{"name":"aortic aneurysm, familial abdominal, 1","type":"exact"}],"termid":"MONDO:0024521","xrefs":{"Monarch":{"xref_id":"0024521"}}}


id: PBO:0079187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 16, pseudogene","termid":"PBO:0079187"}


id: MONDO:0016296
data:
  {"annotated_genes":["SJAG_03698","SJAG_00321","SJAG_03418","SJAG_03597"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032787"},{"annotations":[87707,87708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026763"},{"annotations":[88805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030886"}]},"cv_name":"mondo","definition":"Holoprosencephaly (HPE) is a complex brain malformation resulting from incomplete cleavage of the prosencephalon, occurring between the 18th and 28th day of gestation, and affecting both the forebrain and face, which results in neurological manifestations and facial anomalies of variable severity.","definition_xrefs":["Orphanet:2162"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_03418":null,"SJAG_03597":null,"SJAG_03698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:Q04.2","MedDRA:10056304","icd11.foundation:1712699129","NCIT:C74988","MEDGEN:38214","NORD:1247","DOID:4621","OMIMPS:236100","SCTID:30915001","MESH:D016142","GARD:6665","NANDO:2200819","UMLS:C0079541"],"synonyms":[{"name":"HPE","type":"exact"},{"name":"holoprosencephaly sequence","type":"exact"}],"termid":"MONDO:0016296","terms_by_termid":{"MONDO:0026763":null,"MONDO:0030886":null,"MONDO:0032787":null},"xrefs":{"Monarch":{"xref_id":"0016296"}}}


id: PBO:0052279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 6A","termid":"PBO:0052279"}


id: GO:0071516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initial formation of a stable single-strand DNA lesion that triggers programmed gene conversion at the mating-type locus, thereby restricting mating-type interconversion to one of the two sister chromatids during DNA replication.","definition_xrefs":["GOC:mah","PMID:18723894"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of imprinting at mating-type locus (obsolete GO:0071516)","synonyms":[{"name":"mating type determination, establishment of imprinting","type":"exact"}],"termid":"GO:0071516"}


id: PBO:0050178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA lyase","termid":"PBO:0050178"}


id: PBO:0070051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 8, pseudogene","termid":"PBO:0070051"}


id: GO:1904427
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:22910094","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of calcium ion membrane transport","type":"narrow"},{"name":"activation of calcium ion transmembrane transport","type":"narrow"},{"name":"activation of transmembrane calcium transport","type":"narrow"},{"name":"positive regulation of calcium ion membrane transport","type":"exact"},{"name":"positive regulation of transmembrane calcium transport","type":"exact"},{"name":"up regulation of calcium ion membrane transport","type":"exact"},{"name":"up regulation of calcium ion transmembrane transport","type":"exact"},{"name":"up regulation of transmembrane calcium transport","type":"exact"},{"name":"up-regulation of calcium ion membrane transport","type":"exact"},{"name":"up-regulation of calcium ion transmembrane transport","type":"exact"},{"name":"up-regulation of transmembrane calcium transport","type":"exact"},{"name":"upregulation of calcium ion membrane transport","type":"exact"},{"name":"upregulation of calcium ion transmembrane transport","type":"exact"},{"name":"upregulation of transmembrane calcium transport","type":"exact"}],"termid":"GO:1904427","terms_by_termid":{"GO:1905665":null}}


id: PBO:0027770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_recombination_frequency","termid":"PBO:0027770"}


id: MONDO:0008308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priapism, familial idiopathic","secondary_identifiers":["UMLS:C1867771","MESH:C531791","MEDGEN:356846","OMIM:176620"],"synonyms":[{"name":"familial idiopathic priapism","type":"related"},{"name":"priapism, familial idiopathic","type":"exact"}],"termid":"MONDO:0008308","xrefs":{"Monarch":{"xref_id":"0008308"}}}


id: PBO:0045495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSEL antisense RNA 1","termid":"PBO:0045495"}


id: PBO:0076909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor A, mitochondrial pseudogene 1","termid":"PBO:0076909"}


id: PBO:0070861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 14","termid":"PBO:0070861"}


id: PBO:0066819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 118","termid":"PBO:0066819"}


id: FYPO:0007334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at centromere outer repeat regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere outer repeat","termid":"FYPO:0002346"},{"relation_name":"is_a","term_name":"abolished chromatin silencing","termid":"FYPO:0007333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"abolished chromatin silencing at centromere outer repeat","synonyms":[{"name":"abolished chromatin silencing at centromere otr","type":"exact"},{"name":"abolished chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"abolished chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"abolished chromatin silencing at pericentric region","type":"related"},{"name":"abolished chromatin silencing at pericentromeric region","type":"related"},{"name":"abolished heterochromatin silencing at centromere outer repeat region","type":"exact"},{"name":"chromatin silencing at centromere outer repeat abolished","type":"exact"}],"termid":"FYPO:0007334"}


id: PBO:0088536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Gcn20","termid":"PBO:0088536"}


id: GO:1901988
data:
  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regulation of cell cycle phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"down regulation of cell cycle phase transition","type":"exact"},{"name":"down regulation of cell cycle transition","type":"exact"},{"name":"down-regulation of cell cycle phase transition","type":"exact"},{"name":"down-regulation of cell cycle transition","type":"exact"},{"name":"downregulation of cell cycle phase transition","type":"exact"},{"name":"downregulation of cell cycle transition","type":"exact"},{"name":"inhibition of cell cycle phase transition","type":"narrow"},{"name":"inhibition of cell cycle transition","type":"exact"},{"name":"negative regulation of cell cycle transition","type":"exact"}],"termid":"GO:1901988","terms_by_termid":{"GO:0001100":null,"GO:0007094":null,"GO:0007095":null,"GO:0010972":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031573":null,"GO:0031578":null,"GO:0033314":null,"GO:0033315":null,"GO:0033316":null,"GO:0044773":null,"GO:0044778":null,"GO:0044878":null,"GO:0051598":null,"GO:0090267":null,"GO:0110031":null,"GO:0140499":null,"GO:1902103":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:2000134":null}}


id: PBO:0060426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAB1 pseudogene 1","termid":"PBO:0060426"}


id: PBO:0041117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-TFIID TATA-box binding protein associated factor 1","termid":"PBO:0041117"}


id: PBO:0027500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_fluconazole","termid":"PBO:0027500"}


id: PBO:0043209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 2","termid":"PBO:0043209"}


id: GO:0018473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-2-methyl-5-isopropylhexa-2,5-dienal + NAD+ + H2O = NADH + H+ + cis-2-methyl-5-isopropylhexa-2,5-dienoic acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-2-methyl-5-isopropylhexa-2,5-dienal dehydrogenase activity (obsolete GO:0018473)","termid":"GO:0018473"}


id: PBO:0063609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 1","termid":"PBO:0063609"}


id: FYPO:0004994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of meiosis","termid":"FYPO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of meiosis I","synonyms":[{"name":"delayed meiosis I","type":"exact"},{"name":"delayed onset of first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004994"}


id: GO:1904585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a putrescine stimulus.","definition_xrefs":["GO_REF:0000071","PMID:20805360","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to putrescine","synonyms":[{"name":"response to 1,4-Butanediamine","type":"exact"},{"name":"response to 1,4-Diaminobutane","type":"exact"},{"name":"response to tetramethylenediamine","type":"exact"}],"termid":"GO:1904585"}


id: PBO:0065433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 6","termid":"PBO:0065433"}


id: FYPO:0003306
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the mitotic index is lower than normal. The mitotic index is the proportion of the population undergoing mitosis at any given time.","definition_xrefs":["PMID:22684255","PomBase:mah","PMID:11683392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased mitotic index","synonyms":[{"name":"reduced mitotic index","type":"exact"}],"termid":"FYPO:0003306"}


id: GO:0021542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hippocampus development","termid":"GO:0021766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dentate gyrus development","termid":"GO:0021542"}


id: MONDO:0012326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the ILDR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 42","secondary_identifiers":["UMLS:C1864818","MEDGEN:351225","OMIM:609646","MESH:C566460","DOID:0110500","GARD:22614"],"synonyms":[{"name":"DFNB42","type":"narrow"},{"name":"ILDR1 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 42","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 42","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in ILDR1","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 42","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 42","type":"exact"},{"name":"deafness, autosomal recessive 42","type":"narrow"},{"name":"deafness, autosomal recessive type 42","type":"narrow"}],"termid":"MONDO:0012326","xrefs":{"Monarch":{"xref_id":"0012326"}}}


id: GO:0044588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to laminaribiose, a disaccharide.","definition_xrefs":["GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"laminaribiose binding","termid":"GO:0044588"}


id: MONDO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"mechanical entropion","secondary_identifiers":["UMLS:C0155189","DOID:13112","MEDGEN:509838","SCTID:38683003","ICD9:374.02"],"termid":"MONDO:0001636","xrefs":{"Monarch":{"xref_id":"0001636"}}}


id: GO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to initiate or regulate RNA polymerase III transcription.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III transcription factor activity (obsolete GO:0003709)","synonyms":[{"name":"RNA polymerase III transcription factor activity","type":"exact"}],"termid":"GO:0003709"}


id: GO:0032132
data:
  {"annotated_genes":["SJAG_04778"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89990],"is_not":false,"summary":null,"term":"GO:0032132"}]},"cv_name":"molecular_function","definition":"Binding to an O6-alkylguanine adduct in DNA.","definition_xrefs":["PMID:16679453","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated DNA binding","termid":"GO:0032131"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04778":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"O6-alkylguanine-DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032132","terms_by_termid":{"GO:0032132":null}}


id: MONDO:0002553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that affects the cerebellopontine angle. Representative examples include vestibular schwannoma and meningioma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brainstem cancer","termid":"MONDO:0002912"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellopontine angle tumor","secondary_identifiers":["SCTID:126947009","NCIT:C5414","UMLS:C0474740","MEDGEN:99181","DOID:3200"],"synonyms":[{"name":"C-P angle neoplasm","type":"exact"},{"name":"C-P angle tumor","type":"exact"},{"name":"C-P angle tumour","type":"exact"},{"name":"cerebellar Pontine angle neoplasm","type":"exact"},{"name":"cerebellar Pontine angle tumor","type":"exact"},{"name":"cerebellar Pontine angle tumour","type":"exact"},{"name":"cerebellopontine angle neoplasm","type":"exact"},{"name":"cerebellopontine angle neoplasm (disease)","type":"exact"},{"name":"cerebellopontine angle tumor","type":"exact"},{"name":"neoplasm of C-P angle","type":"exact"},{"name":"neoplasm of cerebellar Pontine angle","type":"exact"},{"name":"neoplasm of cerebellopontine angle","type":"exact"},{"name":"neoplasm of the C-P angle","type":"exact"},{"name":"neoplasm of the cerebellar Pontine angle","type":"exact"},{"name":"neoplasm of the cerebellopontine angle","type":"exact"},{"name":"tumor of C-P angle","type":"exact"},{"name":"tumor of cerebellar Pontine angle","type":"exact"},{"name":"tumor of cerebellopontine angle","type":"exact"},{"name":"tumor of the C-P angle","type":"exact"},{"name":"tumor of the cerebellar Pontine angle","type":"exact"},{"name":"tumor of the cerebellopontine angle","type":"exact"},{"name":"tumour of C-P angle","type":"exact"},{"name":"tumour of cerebellar Pontine angle","type":"exact"},{"name":"tumour of cerebellopontine angle","type":"exact"},{"name":"tumour of the C-P angle","type":"exact"},{"name":"tumour of the cerebellar Pontine angle","type":"exact"},{"name":"tumour of the cerebellopontine angle","type":"exact"}],"termid":"MONDO:0002553","xrefs":{"Monarch":{"xref_id":"0002553"}}}


id: PBO:0054342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1735","termid":"PBO:0054342"}


id: PBO:0017846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urea transmembrane transporter (predicted)","termid":"PBO:0017846"}


id: PBO:0078855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 3","termid":"PBO:0078855"}


id: MONDO:0020005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare endocrine system disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare endocrine disease (obsolete MONDO:0020005)","secondary_identifiers":["Orphanet:97978"],"synonyms":[{"name":"rare endocrine system disease","type":"exact"}],"termid":"MONDO:0020005","xrefs":{"Monarch":{"xref_id":"0020005"}}}


id: PBO:0078303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-8","termid":"PBO:0078303"}


id: PBO:0061799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dense fiber of sperm tails 1","termid":"PBO:0061799"}


id: GO:0097018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which albumin is taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron.","definition_xrefs":["GOC:yaf","PMID:18431508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal protein absorption","termid":"GO:0097017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal albumin absorption","termid":"GO:0097018"}


id: FYPO:0007730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein distribution along RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal protein distribution across RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-regulated genes during mitotic metaphase","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein distribution in chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007730"}


id: PBO:0063726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 1","termid":"PBO:0063726"}


id: PBO:0004805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centractin family actin-like protein Arp1 (predicted)","termid":"PBO:0004805"}


id: GO:1902217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an erythrocyte.","definition_xrefs":["GOC:TermGenie","PMID:14569084","GOC:BHF","GOC:mtg_apoptosis","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte apoptotic process","synonyms":[{"name":"RBC apoptosis","type":"narrow"},{"name":"RBC apoptotic process","type":"exact"},{"name":"erythrocyte apoptosis","type":"narrow"},{"name":"red blood cell apoptosis","type":"narrow"},{"name":"red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902217"}


id: PBO:0016921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug116","termid":"PBO:0016921"}


id: PBO:0031595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_positive_regulation_of_transcription","termid":"PBO:0031595"}


id: MONDO:0004663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the colon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon carcinoma","termid":"MONDO:0002032"},{"relation_name":"is_a","term_name":"intestine carcinoma in situ","termid":"MONDO:0004698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colon carcinoma in situ","secondary_identifiers":["ICD9:230.3","ICD10CM:D01.0","MEDGEN:56334","NCIT:C3638","SCTID:92568009","DOID:8826","UMLS:C0154061"],"synonyms":[{"name":"carcinoma in situ of colon","type":"exact"},{"name":"carcinoma in situ of the colon","type":"exact"},{"name":"colon cancer stage 0","type":"exact"},{"name":"colon carcinoma in situ","type":"exact"},{"name":"colon in situ carcinoma","type":"exact"},{"name":"colonic carcinoma in situ","type":"exact"},{"name":"stage 0 carcinoma of colon","type":"exact"},{"name":"stage 0 carcinoma of the colon","type":"exact"},{"name":"stage 0 colon cancer","type":"exact"},{"name":"stage 0 colon cancer aJCC v6","type":"exact"},{"name":"stage 0 colon cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 colon cancer aJCC v7","type":"exact"},{"name":"stage 0 colon carcinoma","type":"exact"},{"name":"stage 0 colonic carcinoma","type":"exact"}],"termid":"MONDO:0004663","xrefs":{"Monarch":{"xref_id":"0004663"}}}


id: PR:Q9P7U4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.05c gene.","definition_xrefs":["UniProtKB:Q9P7U4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VEL1-related protein AC977.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.05c","synonyms":[{"name":"Spom972h-SPAC977.05c","type":"exact"}],"termid":"PR:Q9P7U4"}


id: GO:0043874
data:
  {"annotated_genes":["SJAG_01404"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81007],"is_not":false,"summary":null,"term":"GO:0043874"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions:5-methylsulfanyl-2,3-dioxopentyl phosphate + H2O = 1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one + phosphate.","definition_xrefs":["RHEA:21700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"acireductone synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1237129","EC:3.1.3.77","MetaCyc:3.1.3.77-RXN"],"synonyms":[{"name":"5-(methylthio)-2,3-dioxopentyl-phosphate phosphohydrolase (isomerizing)","type":"related"},{"name":"E-1","type":"related"},{"name":"E-1 enolase-phosphatase","type":"broad"}],"termid":"GO:0043874","terms_by_termid":{"GO:0043874":null}}


id: FYPO:0006336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from one or more microtubule organizing centers (MTOCs) occurs to a lesser extent than normal during mitosis.","definition_xrefs":["PomBase:mah","GO:0051418","PMID:8834801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule nucleation during vegetative growth","termid":"FYPO:0006335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"decreased mitotic microtubule nucleation","synonyms":[{"name":"decreased microtubule nucleation by microtubule organizing center during mitosis","type":"exact"},{"name":"decreased microtubule nucleation during M phase of mitotic cell cycle","type":"related"},{"name":"decreased microtubule nucleation during mitosis","type":"exact"},{"name":"decreased mitotic microtubule nucleation during vegetative growth","type":"exact"},{"name":"reduced mitotic microtubule nucleation","type":"exact"}],"termid":"FYPO:0006336"}


id: PBO:0001262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic vesicle protein, Vid24 family (predicted)","termid":"PBO:0001262"}


id: MONDO:0007657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"giant neutrophil leukocytes","secondary_identifiers":["MEDGEN:330754","UMLS:C1842039","OMIM:137500"],"synonyms":[{"name":"giant neutrophil leukocytes","type":"exact"}],"termid":"MONDO:0007657","xrefs":{"Monarch":{"xref_id":"0007657"}}}


id: MONDO:0008494
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88207],"is_not":false,"summary":null,"term":"MONDO:0008494"}]},"cv_name":"mondo","definition":"A rare, hereditary, hemolytic anemia due to a red cell membrane anomaly characterized by fatigue, mild anemia and pseudohyperkalemia due to a potassium leak from the red blood cells. A hallmark of this condition is that red blood cells lyse on storage at 4 degrees centigrade.","definition_xrefs":["Orphanet:398088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"hereditary stomatocytosis","termid":"MONDO:0020102"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"cryohydrocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10184","MESH:C535827","MEDGEN:396137","OMIM:185020","UMLS:C1861453"],"synonyms":[{"name":"CHC","type":"exact"},{"name":"cryohydrocytosis","type":"exact"},{"name":"hereditary cryohydrocytosis with normal stomatin","type":"exact"},{"name":"pseudohyperkalemia Cardiff","type":"related"},{"name":"stomatocytosis, cold-sensitive","type":"exact"}],"termid":"MONDO:0008494","terms_by_termid":{"MONDO:0008494":null},"xrefs":{"Monarch":{"xref_id":"0008494"}}}


id: PBO:0045105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in malignant brain tumors 1 like 1 (pseudogene)","termid":"PBO:0045105"}


id: PBO:0043166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class II major histocompatibility complex transactivator","termid":"PBO:0043166"}


id: PBO:0074235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 48 member 1","termid":"PBO:0074235"}


id: GO:0035812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of sodium ions from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.","definition_xrefs":["GOC:yaf","PMID:25287933","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular secretion","termid":"GO:0097254"},{"relation_name":"part_of","term_name":"sodium ion homeostasis","termid":"GO:0055078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"renal sodium excretion","termid":"GO:0035812"}


id: PBO:0031741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mating_type_switching","termid":"PBO:0031741"}


id: _global:results_in_specification_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship linking a cell and its participation in a process that results in the fate of the cell being specified. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. ","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_specification_of","secondary_identifiers":["GOREL:0001021","RO:0002356"],"termid":"_global:results_in_specification_of"}


id: MONDO:0020045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive cerebellar ataxia due to a DNA repair defect (obsolete MONDO:0020045)","secondary_identifiers":["Orphanet:98097"],"termid":"MONDO:0020045","xrefs":{"Monarch":{"xref_id":"0020045"}}}


id: GO:0032142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single guanine insertion or a deletion that results in an unpaired guanine.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"single guanine insertion binding","termid":"GO:0032142"}


id: MONDO:0024228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A miliaria that is characterized by ductal occlusion of the papillary dermis causing the gland's secretions to leak between the superficial and deep layers of the skin resulting in a rapidly-spreading flesh-colored rash.","definition_xrefs":["DOID:0070320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria profunda","secondary_identifiers":["MEDGEN:537908","SCTID:47317002","UMLS:C0263468","icd11.foundation:1540615212"],"termid":"MONDO:0024228","xrefs":{"Monarch":{"xref_id":"0024228"}}}


id: GO:0052811
data:
  {"annotated_genes":["SJAG_01863"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93686],"is_not":false,"summary":null,"term":"GO:0052811"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + ADP + H+.","definition_xrefs":["PMID:9660759","PMID:9211928","RHEA:63688","PMID:9367159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01863":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 4-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-10957","Reactome:R-HSA-1676145"],"synonyms":[{"name":"phosphatidylinositol 3-phosphate 4-kinase activity","type":"exact"}],"termid":"GO:0052811","terms_by_termid":{"GO:0052811":null}}


id: PBO:0075303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2 pseudogene 1","termid":"PBO:0075303"}


id: GO:1903808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tyrosine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:23895341","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine transport","termid":"GO:0015828"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-tyrosine import across plasma membrane","secondary_identifiers":["GO:0036232"],"synonyms":[{"name":"L-tyrosine import","type":"broad"},{"name":"L-tyrosine import into cell","type":"exact"},{"name":"L-tyrosine uptake","type":"exact"}],"termid":"GO:1903808"}


id: PBO:0056493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 1","termid":"PBO:0056493"}


id: PBO:0052699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17","termid":"PBO:0052699"}


id: GO:0039635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces the frequency, rate or extent of peptidoglycan biosynthesis in the host organism. Peptidoglycans are any of a class of glycoconjugates found in bacterial cell walls, and phages have mechanisms to disrupt their host's cell walls.","definition_xrefs":["GOC:bm","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host peptidoglycan biosynthetic process","synonyms":[{"name":"suppression by virus of host peptidoglycan biosynthetic process","type":"narrow"},{"name":"viral inhibition of host peptidoglycan biosynthesis","type":"related"}],"termid":"GO:0039635"}


id: PBO:0048346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 57","termid":"PBO:0048346"}


id: MONDO:0003693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm characterized by the presence of cystic glandular and fibrous tissues and clear cells.","definition_xrefs":["NCIT:C8988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenofibroma","termid":"MONDO:0003460"},{"relation_name":"is_a","term_name":"cystadenofibroma","termid":"MONDO:0003464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell cystadenofibroma","secondary_identifiers":["UMLS:C1377853","DOID:5895","MEDGEN:235121"],"synonyms":[{"name":"clear cell cystadenofibroma","type":"exact"}],"termid":"MONDO:0003693","xrefs":{"Monarch":{"xref_id":"0003693"}}}


id: GO:0070344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"fat cell proliferation","termid":"GO:0070341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fat cell proliferation","synonyms":[{"name":"regulation of adipocyte proliferation","type":"exact"},{"name":"regulation of adipose cell proliferation","type":"exact"}],"termid":"GO:0070344"}


id: PBO:0029323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_rDNA_during_mitotic_S_phase","termid":"PBO:0029323"}


id: PBO:0063110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate androgen-regulated mucin-like protein 1","termid":"PBO:0063110"}


id: GO:0042163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the beta subunit of interleukin-12.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-12 binding","termid":"GO:0019972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-12 beta subunit binding","synonyms":[{"name":"CLMFp40 binding","type":"exact"},{"name":"IL-12B binding","type":"exact"},{"name":"IL-12p40 binding","type":"exact"},{"name":"NKSFp40 binding","type":"exact"}],"termid":"GO:0042163"}


id: PBO:0119674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, glycine","termid":"PBO:0119674"}


id: GO:0120044
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The tapered base of the stereocilium adjacent to where it joins the hair cell body. This region contains a rootlet comprised of bundled actin filaments which spans the joint and stabilizes the stereocilium.","definition_xrefs":["GOC:krc","PMID:20170899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium base","synonyms":[{"name":"stereocilium taper","type":"exact"}],"termid":"GO:0120044"}


id: PBO:0066742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 39","termid":"PBO:0066742"}


id: MONDO:0005274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0005274 (obsolete MONDO:0005274)","termid":"MONDO:0005274","xrefs":{"Monarch":{"xref_id":"0005274"}}}


id: MONDO:0009622
data:
  {"annotated_genes":["SJAG_01076"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89061],"is_not":false,"summary":null,"term":"MONDO:0009622"}]},"cv_name":"mondo","definition":"Jawad syndrome is a rare, genetic, multiple congenital anomalies/dysmorphic syndrome characterized by congenital microcephaly with facial dysmorphism (sloping forehead, prominent nose, mild retrognathia), moderate to severe, non-progressive intellectual disability and symmetrical digital malformations of variable degree, including brachydactyly of the fifth fingers with single flexion crease, clinodactyly, syndactyly, polydactyly and hallux valgus. Congenital anonychia and white café au lait-like spots on the skin of hands and feet are also associated.","definition_xrefs":["Orphanet:313795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01076":null},"genotype_count":0,"is_obsolete":false,"name":"Jawad syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:810673","GARD:17410","OMIM:251255","UMLS:C0796063"],"synonyms":[{"name":"JAWAD syndrome","type":"related"},{"name":"JWDS","type":"related"},{"name":"Jawad syndrome","type":"exact"},{"name":"Kelly syndrome","type":"related"},{"name":"microcephaly with intellectual disability and digital anomalies","type":"related"},{"name":"microcephaly with mental retardation and digital anomalies","type":"related"}],"termid":"MONDO:0009622","terms_by_termid":{"MONDO:0009622":null},"xrefs":{"Monarch":{"xref_id":"0009622"}}}


id: PBO:0055544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2980","termid":"PBO:0055544"}


id: GO:0006835
data:
  {"annotated_genes":["SJAG_01406","SJAG_03503","SJAG_02011","SJAG_00522","SJAG_00275","SJAG_02140","SJAG_03256","SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015742"},{"annotations":[62433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015884"},{"annotations":[98432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[105735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[98433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"},{"annotations":[103550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"},{"annotations":[68892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071423"},{"annotations":[64890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015743"},{"annotations":[103551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098715"},{"annotations":[65780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901553"},{"annotations":[98435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990550"},{"annotations":[90226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"},{"annotations":[90227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990555"},{"annotations":[103552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"}]},"cv_name":"biological_process","definition":"The directed movement of dicarboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02011":null,"SJAG_02140":null,"SJAG_03256":null,"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"dicarboxylic acid transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006841"],"synonyms":[{"name":"sodium:dicarboxylate transport","type":"related"}],"termid":"GO:0006835","terms_by_termid":{"GO:0015742":null,"GO:0015743":null,"GO:0015813":null,"GO:0015884":null,"GO:0070778":null,"GO:0071423":null,"GO:0090515":null,"GO:0098714":null,"GO:0098715":null,"GO:0098720":null,"GO:1901553":null,"GO:1990550":null,"GO:1990555":null,"GO:1990556":null}}


id: MONDO:0007121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aniridia, microcornea, and spontaneously Reabsorbed cataract","secondary_identifiers":["MEDGEN:350777","MESH:C566280","UMLS:C1862867","OMIM:106230"],"synonyms":[{"name":"aniridia, microcornea, and spontaneously Reabsorbed cataract","type":"exact"}],"termid":"MONDO:0007121","xrefs":{"Monarch":{"xref_id":"0007121"}}}


id: PBO:0046269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 8","termid":"PBO:0046269"}


id: GO:0070239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of activated T cell autonomous cell death.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"activated T cell autonomous cell death","termid":"GO:0070238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activated T cell autonomous cell death","synonyms":[{"name":"regulation of ACAD","type":"broad"},{"name":"regulation of activated T cell apoptosis","type":"broad"},{"name":"regulation of activated T lymphocyte autonomous cell death","type":"exact"},{"name":"regulation of activated T-cell autonomous cell death","type":"exact"},{"name":"regulation of activated T-lymphocyte autonomous cell death","type":"exact"},{"name":"regulation of activated cell autonomous cell death","type":"broad"}],"termid":"GO:0070239"}


id: PBO:0064175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XB, pseudogene","termid":"PBO:0064175"}


id: PATO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's body containing more than one cyst - formations of an epithelium bounded cavity not associated with neoplasia.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic","termid":"PATO:0001673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic","synonyms":[{"name":"multicystic","type":"exact"}],"termid":"PATO:0002089"}


id: MONDO:0006591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the subcutaneous adipose tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"fibromyalgia","termid":"MONDO:0005546"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panniculitis","secondary_identifiers":["ICD9:729.30","NCIT:C33645","Wikipedia:Panniculitis","icd11.foundation:1056888958","DOID:1526","ICD9:729.3","MEDGEN:45301","UMLS:C0030326","ICD9:729.39","SCTID:22125009","EFO:1000746","MESH:D015434"],"synonyms":[{"name":"Subcutaneous adipose tissue","type":"exact"},{"name":"Subcutaneous tissue","type":"exact"},{"name":"inflammation of subcutaneous adipose tissue","type":"exact"},{"name":"subcutaneous adipose tissue inflammation","type":"exact"},{"name":"subcutis","type":"exact"}],"termid":"MONDO:0006591","xrefs":{"Monarch":{"xref_id":"0006591"}}}


id: GO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immature B cells from the bone marrow acquire the specialized features of T1 stage B cells in the spleen. T1 stage B cells do not express either CD23 or CD21.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transitional stage B cell differentiation","termid":"GO:0002332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transitional one stage B cell differentiation","synonyms":[{"name":"T1 stage B cell differentiation","type":"exact"},{"name":"transitional one stage B cell development","type":"related"},{"name":"transitional one stage B lymphocyte differentiation","type":"exact"},{"name":"transitional one stage B-cell differentiation","type":"exact"},{"name":"transitional one stage B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002333"}


id: FYPO:0006014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one cell forms multiple mating projections that engage multiple partner cells.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"promiscuous mating","synonyms":[{"name":"conjugation with multiple partner cells","type":"exact"},{"name":"formation of multiple mating projections","type":"related"},{"name":"formation of multiple shmoos","type":"related"},{"name":"mating with multiple partner cells","type":"exact"},{"name":"promiscuous conjugation","type":"exact"}],"termid":"FYPO:0006014"}


id: GO:0005135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-3 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-3 receptor binding","synonyms":[{"name":"IL-3","type":"narrow"},{"name":"interleukin-3 receptor ligand","type":"narrow"}],"termid":"GO:0005135"}


id: MONDO:0859223
data:
  {"annotated_genes":["SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88904],"is_not":false,"summary":null,"term":"MONDO:0859223"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04127":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type Iw, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794278","OMIM:619714","UMLS:C5562068"],"termid":"MONDO:0859223","terms_by_termid":{"MONDO:0859223":null},"xrefs":{"Monarch":{"xref_id":"0859223"}}}


id: PBO:0028927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0028927"}


id: MONDO:0011810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Horizontal gaze palsy with progressive scoliosis (HGPPS) is a rare congenital autosomal recessive disease, presenting in children and adolescents, and characterized by progressive scoliosis along with the absence of conjugate horizontal eye movements and associated with failure of the somatosensory and corticospinal neuronal tracts to decussate in the medulla.","definition_xrefs":["Orphanet:2744"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horizontal gaze palsy with progressive scoliosis","secondary_identifiers":["SCTID:702381007","ICD10CM:H49.4","MEDGEN:1683615","MESH:C564593","OMIMPS:607313","UMLS:C4760875","GARD:12682","icd11.foundation:226403142","ICD9:737.43"],"synonyms":[{"name":"HGPPS","type":"exact"},{"name":"gaze palsy, familial horizontal, with progressive scoliosis","type":"related"},{"name":"gaze palsy, horizontal, with progressive scoliosis","type":"related"},{"name":"ophthalmoplegia, progressive external, and scoliosis","type":"related"},{"name":"progressive external ophthalmoplegia and scoliosis","type":"exact"}],"termid":"MONDO:0011810","xrefs":{"Monarch":{"xref_id":"0011810"}}}


id: MOD:00829
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-serine residue by an ester bond to form S-(L-phenylalaninyl)-L-serine.","definition_xrefs":["PubMed:12591958","RESID:AA0418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-phenylalanyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-([(2S)-2-amino-3-phenylpropanoyl]oxy)propanoic acid","type":"exact"},{"name":"CROSSLNK Phenylalanyl serine ester (Ser-Phe)","type":"exact"},{"name":"O-(2-amino-3-phenylpropanoyl)serine","type":"exact"},{"name":"O-(L-phenylalanyl)-L-serine","type":"exact"},{"name":"XLNK1PheOSer","type":"exact"},{"name":"phenylalanine serine ester","type":"exact"}],"termid":"MOD:00829"}


id: FYPO:0002387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at subtelomeres is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"},{"relation_name":"is_a","term_name":"decreased protein localization to telomere","termid":"FYPO:0003803"},{"relation_name":"is_a","term_name":"decreased protein localization to subtelomeric heterochromatin","termid":"FYPO:0005918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to heterochromatin at subtelomere during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin at subtelomere during vegetative growth","type":"exact"},{"name":"decreased protein localization to subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to telomeric heterochromatin during vegetative growth","type":"related"},{"name":"reduced protein localization to subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002387"}


id: PBO:0045512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSTN pseudogene 4","termid":"PBO:0045512"}


id: PR:O13908
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.17c gene.","definition_xrefs":["UniProtKB:O13908","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C22A12.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.17c","synonyms":[{"name":"Spom972h-SPAC22A12.17c","type":"exact"}],"termid":"PR:O13908"}


id: FYPO:0001345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA recombination is abnormal in the vegetative growth phase of the life cycle. DNA recombination is a process that results in reassortment of genes, producing gene combinations different from those that were present in the parents.","definition_xrefs":["GO:0006310","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal DNA recombination during vegetative growth","synonyms":[{"name":"abnormal DNA recombination during mitotic cell cycle","type":"related"},{"name":"abnormal recombination during vegetative growth","type":"exact"},{"name":"recombination defects during vegetative growth","type":"exact"}],"termid":"FYPO:0001345"}


id: PBO:0065177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROP paired-like homeobox 1","termid":"PBO:0065177"}


id: MOD:00417
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidoethyl-L-cysteine.","definition_xrefs":["Unimod:24#C","DeltaMass:72","OMSSA:5","PubMed:1481983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carboxamidoethyl-L-cysteine","synonyms":[{"name":"Acrylamide adduct","type":"related"},{"name":"PAM-Cys","type":"exact"},{"name":"Propionamide","type":"related"},{"name":"Propionamide or Acrylamide adduct","type":"exact"},{"name":"S-(3-amino-3-oxopropyl)cysteine","type":"exact"},{"name":"S-carbamoylethyl-L-cysteine","type":"exact"},{"name":"S-propanamide-L-cysteine","type":"exact"},{"name":"propionamidec","type":"exact"}],"termid":"MOD:00417"}


id: PBO:0114870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor GTPase Guf1","termid":"PBO:0114870"}


id: FYPO:0003738
data:
  {"alleles_by_uniquename":{"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121343],"is_not":false,"summary":null,"term":"FYPO:0003738"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have condensed chromosomes, but show no other signs of having entered mitosis or M phase, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":1,"genotypes_by_uniquename":{"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with condensed chromosomes","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle arrest with condensed chromosomes during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0003738","terms_by_termid":{"FYECO:0000004":null,"FYPO:0003738":null}}


id: PBO:0005187
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.15","termid":"PBO:0005187"}


id: GO:0010555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mannitol stimulus.","definition_xrefs":["PMID:17999646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mannitol","synonyms":[{"name":"response to mannitol stimulus","type":"exact"}],"termid":"GO:0010555"}


id: PBO:0041553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 25","termid":"PBO:0041553"}


id: PBO:0054667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2073","termid":"PBO:0054667"}


id: GO:0090503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving the hydrolysis of terminal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA phosphodiester bond hydrolysis, exonucleolytic (obsolete GO:0090503)","termid":"GO:0090503"}


id: PBO:0082789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TREX complex required for nuclear mRNA export; member of the DEAD-box RNA helicase superfamily and is involved in early and late steps of spliceosome assembly; homolog of the human splicing factor hUAP56; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0082789"}


id: GO:1900828
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-tyrosine.","definition_xrefs":["GOC:TermGenie","PMID:10766779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"D-tyrosine metabolic process","synonyms":[{"name":"D-tyrosine metabolism","type":"exact"}],"termid":"GO:1900828"}


id: PBO:0075819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slingshot protein phosphatase 3","termid":"PBO:0075819"}


id: MONDO:0041526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy disorder with abortive outcome","secondary_identifiers":["ICD10CM:O00-O08","MEDGEN:102352","SCTID:363681007","UMLS:C0156543"],"synonyms":[{"name":"IUFD","type":"exact"},{"name":"intrauterine fetal death","type":"exact"},{"name":"intrauterine fetal demise","type":"exact"},{"name":"pregnancy with abortive outcome","type":"related"},{"name":"stillbirth","type":"exact"}],"termid":"MONDO:0041526","xrefs":{"Monarch":{"xref_id":"0041526"}}}


id: PBO:0073566
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src homology 2 domain containing F","termid":"PBO:0073566"}


id: MONDO:0060564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"HELIX syndrome","secondary_identifiers":["GARD:17967","Orphanet:528105","UMLS:C4522164","OMIM:617671","MEDGEN:1621482"],"synonyms":[{"name":"HELIX","type":"exact"},{"name":"HELIX syndrome","type":"exact"},{"name":"hypohidrosis, electrolyte imbalance, lacrimal gland dysfunction, ichthyosis, and xerostomia","type":"related"},{"name":"hypohidrosis-electrolyte imbalance-lacrimal gland dysfunction-ichthyosis-xerostomia syndrome","type":"exact"}],"termid":"MONDO:0060564","xrefs":{"Monarch":{"xref_id":"0060564"}}}


id: GO:0044144
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of growth of symbiont involved in interaction with host (obsolete GO:0044144)","synonyms":[{"name":"modulation of growth of symbiont during interaction with host","type":"related"}],"termid":"GO:0044144"}


id: MOD:00903
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-asparagine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-asparagine residue","synonyms":[{"name":"ModAsn","type":"exact"}],"termid":"MOD:00903"}


id: GO:0034024
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id: GO:0018102
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-arginine to form peptidyl-4-hydroxy-L-arginine.","definition_xrefs":["RESID:AA0215"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-arginine hydroxylation to peptidyl-4-hydroxy-L-arginine (obsolete GO:0018102)","termid":"GO:0018102"}


id: GO:0009762
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of C4 photosynthesis, as it occurs in plants in which the enzyme decarboxylating C4 acids in the bundle sheath is NADP-malic enzyme.","definition_xrefs":["PMID:11788762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4 photosynthesis","termid":"GO:0009760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"NADP-malic enzyme C4 photosynthesis","secondary_identifiers":["MetaCyc:PWY-241"],"termid":"GO:0009762"}


id: MONDO:0015671
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diphtheria (obsolete MONDO:0015671)","termid":"MONDO:0015671","xrefs":{"Monarch":{"xref_id":"0015671"}}}


id: RO:HOM0000012
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  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that involves sets of syntenic blocks.","definition_xrefs":["DOI:10.1002/1097-010X(20001215)288:4<345::AID-JEZ7>3.0.CO;2-Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_syntenic_homology_relationship_with","termid":"RO:HOM0000010"},{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_syntenic_paralogy_relationship_with","synonyms":[{"name":"duplicon","type":"related"},{"name":"paralogon","type":"related"},{"name":"syntenic paralogous to","type":"exact"}],"termid":"RO:HOM0000012"}


id: GO:0009330
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses DNA topoisomerase II (double strand cut, ATP-hydrolyzing) activity.","definition_xrefs":["GOC:mah","GOC:krc","WikiPedia:Type_II_topoisomerase","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex","termid":"GO:0009330"}


id: GO:0071963
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id: GO:0010604
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id: MONDO:0020277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectodermal malformation syndrome associated with ocular features (obsolete MONDO:0020277)","termid":"MONDO:0020277","xrefs":{"Monarch":{"xref_id":"0020277"}}}


id: PBO:0054115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1480","termid":"PBO:0054115"}


id: PBO:0074755
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 114","termid":"PBO:0074755"}


id: GO:0002321
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a natural killer cell progenitor.","definition_xrefs":["PMID:16551264","GOC:add","PMID:16551251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell progenitor differentiation","termid":"GO:0002321"}


id: PBO:0079145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 7","termid":"PBO:0079145"}


id: GO:0075111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with, inhibits or disrupts a receptor-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","termid":"GO:0075109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host receptor-mediated signal transduction","synonyms":[{"name":"disruption of host receptor-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host receptor-mediated signal transduction","type":"exact"},{"name":"suppression by symbiont of host receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075111"}


id: PBO:0034519
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_elongated_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034519"}


id: GO:0016036
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id: PBO:0013042
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear exosome-associated RNA binding protein Mpp6","termid":"PBO:0013042"}


id: GO:1901990
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id: MONDO:0013460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the SP7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 12","secondary_identifiers":["MEDGEN:462783","GARD:15722","UMLS:C3151433","DOID:0110348","OMIM:613849"],"synonyms":[{"name":"OI, type 12","type":"related"},{"name":"OI12","type":"exact"},{"name":"SP7 osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in SP7","type":"exact"},{"name":"osteogenesis imperfecta type XII","type":"exact"},{"name":"osteogenesis imperfecta, type 12","type":"related"},{"name":"osteogenesis imperfecta, type XII","type":"related"}],"termid":"MONDO:0013460","xrefs":{"Monarch":{"xref_id":"0013460"}}}


id: PBO:0090437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide mannosyltransferase activity Imt1","termid":"PBO:0090437"}


id: PBO:0081321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 107","termid":"PBO:0081321"}


id: FYPO:0003116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to plumbagin. Cells stop growing (and may die) at a concentration of plumbagin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to plumbagin","synonyms":[{"name":"hypersensitive to plumbagin","type":"exact"},{"name":"sensitive to plumbagin during mitotic cell cycle","type":"related"},{"name":"sensitive to plumbagin during vegetative growth","type":"exact"}],"termid":"FYPO:0003116"}


id: PBO:0066585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member B","termid":"PBO:0066585"}


id: GO:0018713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-ketopimeloyl-CoA + CoA = glutaryl-CoA + acetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"3-ketopimelyl-CoA thiolase activity","secondary_identifiers":["MetaCyc:RXN-8032"],"termid":"GO:0018713"}


id: PBO:0002573
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit B","termid":"PBO:0002573"}


id: MONDO:0019590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare endocrine growth disease (obsolete MONDO:0019590)","secondary_identifiers":["Orphanet:90692"],"termid":"MONDO:0019590","xrefs":{"Monarch":{"xref_id":"0019590"}}}


id: PBO:0080869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YJU2 splicing factor homolog B","termid":"PBO:0080869"}


id: PBO:0109466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDAH family member 2, ADMA-independent","termid":"PBO:0109466"}


id: PBO:0034714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex ATPase subunit Psm3/Smc3","termid":"PBO:0034714"}


id: PBO:0031894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal uridylyltransferase Cid1","termid":"PBO:0031894"}


id: GO:2001133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a methanethiol.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"methane biosynthetic process from methanethiol","termid":"GO:2001133"}


id: PBO:0086205
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YDL027C is not an essential gene","termid":"PBO:0086205"}


id: PBO:0073713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1","termid":"PBO:0073713"}


id: GO:1902902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of autophagosome assembly.","definition_xrefs":["PMID:21975012","GOC:TermGenie","GOC:als","GO_REF:0000058","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macroautophagy","termid":"GO:0016242"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"regulation of autophagosome assembly","termid":"GO:2000785"},{"relation_name":"negatively_regulates","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006914","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of autophagosome assembly","synonyms":[{"name":"down regulation of PAS formation","type":"narrow"},{"name":"down regulation of autophagic vacuole assembly","type":"exact"},{"name":"down regulation of autophagic vacuole formation","type":"related"},{"name":"down regulation of autophagosome biosynthesis","type":"exact"},{"name":"down regulation of autophagosome formation","type":"exact"},{"name":"down-regulation of PAS formation","type":"narrow"},{"name":"down-regulation of autophagic vacuole assembly","type":"exact"},{"name":"down-regulation of autophagic vacuole formation","type":"related"},{"name":"down-regulation of autophagosome biosynthesis","type":"exact"},{"name":"down-regulation of autophagosome formation","type":"exact"},{"name":"downregulation of PAS formation","type":"narrow"},{"name":"downregulation of autophagic vacuole assembly","type":"exact"},{"name":"downregulation of autophagic vacuole formation","type":"related"},{"name":"downregulation of autophagosome biosynthesis","type":"exact"},{"name":"downregulation of autophagosome formation","type":"exact"},{"name":"inhibition of PAS formation","type":"narrow"},{"name":"inhibition of autophagic vacuole assembly","type":"narrow"},{"name":"inhibition of autophagic vacuole formation","type":"related"},{"name":"inhibition of autophagosome biosynthesis","type":"narrow"},{"name":"inhibition of autophagosome formation","type":"narrow"},{"name":"negative regulation of PAS formation","type":"narrow"},{"name":"negative regulation of autophagic vacuole assembly","type":"exact"},{"name":"negative regulation of autophagic vacuole formation","type":"related"},{"name":"negative regulation of autophagosome biosynthesis","type":"exact"},{"name":"negative regulation of autophagosome formation","type":"exact"}],"termid":"GO:1902902"}


id: MONDO:1012083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetragametic chimerism, non-human animal","termid":"MONDO:1011918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, dog","secondary_identifiers":["OMIA:000393-9615"],"termid":"MONDO:1012083","xrefs":{"Monarch":{"xref_id":"1012083"}}}


id: PBO:0047307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas cell surface death receptor","termid":"PBO:0047307"}


id: FYPO:0003938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is increased relative to normal under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth","termid":"FYPO:0003937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0001985","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth during glucose starvation","synonyms":[{"name":"fast cell population growth during glucose starvation","type":"narrow"},{"name":"increased cell population growth during glucose depletion","type":"exact"},{"name":"increased cell population growth during glucose deprivation","type":"exact"},{"name":"increased cell population growth during glucose limitation","type":"related"},{"name":"increased cell population growth in response to glucose starvation","type":"exact"},{"name":"resistant to glucose starvation","type":"related"}],"termid":"FYPO:0003938"}


id: PBO:0067505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 645, pseudogene","termid":"PBO:0067505"}


id: PBO:0051956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor type 3","termid":"PBO:0051956"}


id: PBO:0057996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3920","termid":"PBO:0057996"}


id: GO:1990979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of copper ions passing through the blood-brain barrier.","definition_xrefs":["PMID:24614235"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion transport across blood-brain barrier (obsolete GO:1990979)","synonyms":[{"name":"copper ion transport across BBB","type":"related"}],"termid":"GO:1990979"}


id: PBO:0040600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 4","termid":"PBO:0040600"}


id: PBO:0086600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is increased greatly during sporulation; YEL023C is not an essential gene","termid":"PBO:0086600"}


id: GO:0098799
data:
  {"annotated_genes":["SJAG_04996","SJAG_05259","SJAG_03710","SJAG_02361","SJAG_01951","SJAG_00569","SJAG_02355","SJAG_01780","SJAG_03416","SJAG_03502","SJAG_01305","SJAG_01929","SJAG_04370","SJAG_00948","SJAG_03415","SJAG_03345","SJAG_01134","SJAG_03358","SJAG_03515"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91073,106729,117751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036266"},{"annotations":[81866,76529,71679,71722,118598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032865"},{"annotations":[112360,113752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140595"},{"annotations":[80757,108099,72220,101302,64843,80938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005742"},{"annotations":[71678,92194,75133,62553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001401"}]},"cv_name":"cellular_component","definition":"Any protein complex that is part of the outer mitochondrial membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial outer membrane","termid":"GO:0005741"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00569":null,"SJAG_00948":null,"SJAG_01134":null,"SJAG_01305":null,"SJAG_01780":null,"SJAG_01929":null,"SJAG_01951":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_03345":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03710":null,"SJAG_04370":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"outer mitochondrial membrane protein complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098799","terms_by_termid":{"GO:0001401":null,"GO:0005742":null,"GO:0032865":null,"GO:0036266":null,"GO:0140595":null}}


id: GO:0010097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a floral organ primordium acquires stamen or staminode identity. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of floral organ identity","termid":"GO:0010093"},{"relation_name":"part_of","term_name":"stamen formation","termid":"GO:0048455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of stamen identity","termid":"GO:0010097"}


id: PBO:0031642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_shmoo_formation","termid":"PBO:0031642"}


id: FYPO:0005449
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 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abolished","type":"exact"}],"termid":"FYPO:0005449","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYPO:0001132":null,"FYPO:0001375":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002998":null,"FYPO:0004105":null,"FYPO:0004318":null,"FYPO:0006557":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: FYPO:0000919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of citrate (Si)-synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal citrate (Si)-synthase activity","termid":"FYPO:0000917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased citrate (Si)-synthase activity","synonyms":[{"name":"increased citrate synthase activity","type":"broad"}],"termid":"FYPO:0000919"}


id: PBO:0069794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1080, pseudogene","termid":"PBO:0069794"}


id: PR:O60066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alkylated DNA repair protein alkB homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16557:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-ketoglutarate-dependent dioxygenase abh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.04c","secondary_identifiers":["UniProtKB:O60066"],"synonyms":[{"name":"SPBC13G1.04c","type":"related"},{"name":"Spom972h-ALKBH1","type":"exact"},{"name":"alkylated DNA repair protein alkB homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60066"}


id: GO:0032614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-11 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-11 production","secondary_identifiers":["GO:0072609","GO:0042230"],"synonyms":[{"name":"IL-11 production","type":"exact"},{"name":"interleukin-11 biosynthetic process","type":"narrow"},{"name":"interleukin-11 secretion","type":"narrow"}],"termid":"GO:0032614"}


id: FYPO:0003287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the meiotic cell cycle is arrested during the first meiotic interphase, before premeiotic DNA replication has taken place.","definition_xrefs":["GO:0051328","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested meiotic cell cycle","termid":"FYPO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic interphase before premeiotic DNA replication","synonyms":[{"name":"abnormal cell cycle arrest in meiotic interphase preceding premeiotic DNA replication","type":"exact"},{"name":"abnormal meiotic cell cycle arrest in interphase before premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0003287"}


id: GO:0097688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurotransmitter-gated ion channel clustering process in which glutamate receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["PMID:19723286","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter-gated ion channel clustering","termid":"GO:0072578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glutamate receptor clustering","synonyms":[{"name":"glutamatergic receptor clustering","type":"exact"}],"termid":"GO:0097688"}


id: PBO:0050863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 2","termid":"PBO:0050863"}


id: GO:0008808
data:
  {"annotated_genes":["SJAG_04317"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94886],"is_not":false,"summary":null,"term":"GO:0008808"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerol + phosphatidylglycerol = diphosphatidylglycerol (cardiolipin) + glycerol.","definition_xrefs":["GOC:jl","RHEA:31451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidyltransferase activity","termid":"GO:0030572"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cardiolipin synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043788","MetaCyc:CARDIOLIPSYN-RXN"],"synonyms":[{"name":"cardiolipin synthase 2 activity","type":"related"},{"name":"cardiolipin synthetase 2 activity","type":"related"},{"name":"cardiolipin synthetase activity","type":"broad"},{"name":"diphosphatidylglycerol synthase activity","type":"exact"}],"termid":"GO:0008808","terms_by_termid":{"GO:0008808":null}}


id: GO:0052410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving chitin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall chitin (obsolete GO:0052410)","termid":"GO:0052410"}


id: GO:0015356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity (obsolete GO:0015356)","synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"exact"}],"termid":"GO:0015356"}


id: MONDO:0009867
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88051],"is_not":false,"summary":null,"term":"MONDO:0009867"}]},"cv_name":"mondo","definition":"Any glycogen storage disease in which the cause of the disease is a mutation in the PRKAG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"PRKAG2-related cardiomyopathy","termid":"MONDO:0800484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005267","MONDO:0005066"],"is_obsolete":false,"name":"lethal congenital glycogen storage disease of heart","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:261740","Orphanet:439854","UMLS:C1849813","ICD10EXP:E74.0+","GARD:10728","DOID:0090101","ICD10EXP:G73.6*","MESH:C564888","MEDGEN:337919"],"synonyms":[{"name":"PRKAG2 glycogen storage disease","type":"exact"},{"name":"fatal congenital hypertrophic cardiomyopathy due to GSD","type":"exact"},{"name":"fatal congenital hypertrophic cardiomyopathy due to glycogen storage disease","type":"related"},{"name":"fatal congenital hypertrophic cardiomyopathy due to glycogenosis","type":"exact"},{"name":"fatal congenital nonlysosomal cardiac glycogenosis","type":"exact"},{"name":"glycogen storage disease caused by mutation in PRKAG2","type":"exact"},{"name":"glycogen storage disease of heart","type":"related"},{"name":"glycogen storage disease of heart, lethal congenital","type":"related"},{"name":"phosphorylase kinase deficiency of heart","type":"exact"}],"termid":"MONDO:0009867","terms_by_termid":{"MONDO:0009867":null},"xrefs":{"Monarch":{"xref_id":"0009867"}}}


id: GO:0050078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + malonate = acetate + malonyl-CoA.","definition_xrefs":["RHEA:18817","EC:2.8.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"malonate CoA-transferase activity","secondary_identifiers":["MetaCyc:MALONATE-COA-TRANSFERASE-RXN","KEGG_REACTION:R00743"],"synonyms":[{"name":"acetyl-CoA:malonate CoA-transferase activity","type":"related"},{"name":"malonate coenzyme A-transferase activity","type":"related"}],"termid":"GO:0050078"}


id: PBO:0054356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1749","termid":"PBO:0054356"}


id: MONDO:0019434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic-onset juvenile idiopathic arthritis is marked by the severity of the extra-articular manifestations (fever, cutaneous eruptions) and by an equal sex ratio.","definition_xrefs":["Orphanet:85414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile idiopathic arthritis","termid":"MONDO:0011429"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic-onset juvenile idiopathic arthritis","secondary_identifiers":["NANDO:1200470","SCTID:201796004","GARD:10966","NANDO:2201055","icd11.foundation:504387587","NCIT:C119031","MESH:C565798","EFO:1001999","UMLS:C1858558","MEDGEN:346934"],"synonyms":[{"name":"SoJIA","type":"exact"},{"name":"Still disease","type":"exact"},{"name":"Still's disease (formerly)","type":"related"},{"name":"sJIA","type":"exact"},{"name":"systemic juvenile idiopathic arthritis","type":"related"},{"name":"systemic onset juvenile idiopathic arthritis","type":"related"},{"name":"systemic onset juvenile rheumatoid arthritis","type":"related"},{"name":"systemic polyarthritis","type":"exact"},{"name":"systemic-onset JIA","type":"exact"}],"termid":"MONDO:0019434","xrefs":{"Monarch":{"xref_id":"0019434"}}}


id: GO:0044433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of cytoplasmic vesicle, a vesicle formed of membrane or protein, found in the cytoplasm of a cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic vesicle part (obsolete GO:0044433)","termid":"GO:0044433"}


id: GO:0047376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinyl palmitate + H2O = all-trans-retinol + H+ + palmitate.","definition_xrefs":["RHEA:13933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinyl-palmitate esterase activity","termid":"GO:0050253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"all-trans-retinyl-palmitate hydrolase, all-trans-retinol forming activity","secondary_identifiers":["MetaCyc:3.1.1.64-RXN","Reactome:R-HSA-2429643","KEGG_REACTION:R02368","Reactome:R-HSA-2404140"],"synonyms":[{"name":"all-trans-retinyl-palmitate acylhydrolase activity","type":"broad"},{"name":"all-trans-retinyl-palmitate hydrolase activity","type":"broad"},{"name":"retinyl-palmitate palmitohydrolase activity","type":"broad"}],"termid":"GO:0047376"}


id: GO:2001124
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translational frameshifting.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"regulates","term_name":"translational frameshifting","termid":"GO:0006452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational frameshifting","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:2001124","terms_by_termid":{"GO:2001125":null}}


id: PBO:0090977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway protein Sec39","termid":"PBO:0090977"}


id: PBO:0061657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear mitotic apparatus protein 1","termid":"PBO:0061657"}


id: GO:0098716
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81720],"is_not":false,"summary":null,"term":"GO:0098716"}]},"cv_name":"biological_process","definition":"The directed movement of nickel cations from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transport","termid":"GO:0035444"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nickel cation import across plasma membrane","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0090509"],"synonyms":[{"name":"nickel cation import into cell","type":"exact"}],"termid":"GO:0098716","terms_by_termid":{"GO:0098716":null}}


id: PBO:0080060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 30","termid":"PBO:0080060"}


id: PBO:0069339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 599, pseudogene","termid":"PBO:0069339"}


id: MONDO:0060664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, cataracts, and renal abnormalities","secondary_identifiers":["OMIM:617913","UMLS:C4693567","DOID:0081263","MEDGEN:1634867"],"synonyms":[{"name":"NEDMCR","type":"related"},{"name":"neurodevelopmental disorder with microcephaly, cataracts, and renal abnormalities","type":"exact"}],"termid":"MONDO:0060664","xrefs":{"Monarch":{"xref_id":"0060664"}}}


id: GO:0032026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnesium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to magnesium ion","termid":"GO:0032026"}


id: GO:0030382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of sperm mitochondria; the process in which they take on their characteristic morphology; they are flattened, elongated, and arranged circumferentially into a tight helical coil around the tail-dense fibers of the mature sperm.","definition_xrefs":["GOC:mah","PMID:8833144","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"sperm mitochondrion organization","synonyms":[{"name":"sperm mitochondria organisation","type":"exact"},{"name":"sperm mitochondria organization and biogenesis","type":"related"},{"name":"sperm mitochondrion organization and biogenesis","type":"related"}],"termid":"GO:0030382"}


id: MONDO:0003009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Overproduction of aldosterone by the adrenal glands, which may lead to hypokalemia and/or hypernatremia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland hyperfunction","termid":"MONDO:0006640"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperaldosteronism","secondary_identifiers":["EFO:0009452","SCTID:88213004","MEDGEN:6960","icd11.foundation:1937534076","MESH:D006929","ICD9:255.1","DOID:446","ICD9:255.10","UMLS:C0020428","ICD10CM:E26"],"synonyms":[{"name":"primary hyperaldosteronism","type":"related"}],"termid":"MONDO:0003009","xrefs":{"Monarch":{"xref_id":"0003009"}}}


id: MONDO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucolipidosis (obsolete MONDO:0000068)","termid":"MONDO:0000068","xrefs":{"Monarch":{"xref_id":"0000068"}}}


id: MONDO:0021678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by bacteria that show up as pink (negative) when treated by the gram-staining method.","definition_xrefs":["MESH:D016905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gram-negative bacterial infections","secondary_identifiers":["ICD9:041.85","MEDGEN:88406","SCTID:371583007","UMLS:C0085423"],"synonyms":[{"name":"bacterial infection, gram-negative","type":"related"},{"name":"bacterial infections, gram negative","type":"related"},{"name":"bacterial infections, gram-negative","type":"related"},{"name":"bacterial infections, gramme negative","type":"related"},{"name":"gram negative bacterial infections","type":"related"},{"name":"gram-negative bacterial infection","type":"related"},{"name":"gramme negative bacterial infections","type":"related"},{"name":"infection, gram-negative bacterial","type":"related"},{"name":"infections, gram negative bacterial","type":"related"},{"name":"infections, gram-negative bacterial","type":"related"},{"name":"infections, gramme negative bacterial","type":"related"}],"termid":"MONDO:0021678","xrefs":{"Monarch":{"xref_id":"0021678"}}}


id: PBO:0089647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-F/3-ketosphinganine reductase fusion protein","termid":"PBO:0089647"}


id: PBO:0076399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAF1A antisense RNA 1","termid":"PBO:0076399"}


id: PBO:0062855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otolin 1","termid":"PBO:0062855"}


id: PR:O94435
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug35 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 35 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.01c","synonyms":[{"name":"Spom972h-mug35","type":"exact"}],"termid":"PR:O94435"}


id: PBO:0017977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructokinase pfk1","termid":"PBO:0017977"}


id: SO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where an inversion begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_breakpoint","synonyms":[{"name":"inversion breakpoint","type":"exact"}],"termid":"SO:0001022"}


id: PBO:0041983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 27","termid":"PBO:0041983"}


id: GO:0071301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B1 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin B1","termid":"GO:0010266"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B1","synonyms":[{"name":"cellular response to thiamin","type":"exact"},{"name":"cellular response to thiamine","type":"exact"}],"termid":"GO:0071301"}


id: PBO:0080954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBED9 antisense RNA 1","termid":"PBO:0080954"}


id: MONDO:0005855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common, benign, usually self-limited viral infection of the skin and occasionally the conjunctivae by a poxvirus (molluscum contagiosum virus). (Dorland, 27th ed)","definition_xrefs":["MESH:D008976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molluscum contagiosum","secondary_identifiers":["ICD10CM:B08.1","MEDGEN:10081","EFO:0007375","UMLS:C0026393","icd11.foundation:82201615","DOID:8867","SCTID:40070004","ICD9:078.0"],"termid":"MONDO:0005855","xrefs":{"Monarch":{"xref_id":"0005855"}}}


id: MONDO:0020325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anaplastic large cell lymphoma (ALCL) is a rare and aggressive peripheral T-cell non-Hodgkin lymphoma, belonging to the group of CD30-positive lymphoproliferative disorders, which affects lymph nodes and extranodal sites. It is comprised of two sub-types, based on the expression of a protein called anaplastic lymphoma kinase (ALK): ALK positive and ALK negative ALCL.","definition_xrefs":["Orphanet:98841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"anaplastic large cell lymphoma","secondary_identifiers":["SCTID:277637000","HGNC:427","EFO:0003032","ICDO:9714/3","MEDGEN:61533","ICD9:200.60","MESH:D017728","DOID:0050744","ICD9:200.6","NANDO:2200021","UMLS:C0206180","GARD:3112","NCIT:C3720","ONCOTREE:ALCL"],"synonyms":[{"name":"ALCL","type":"exact"},{"name":"CD30 Positive anaplastic large cell lymphoma","type":"exact"},{"name":"CD30 positive anaplastic large cell lymphoma","type":"exact"},{"name":"Ki-1 lymphoma","type":"exact"},{"name":"Ki-1 positive anaplastic large cell lymphoma","type":"exact"},{"name":"Ki-1+ ALCL","type":"exact"},{"name":"Ki-1+ anaplastic large cell lymphoma","type":"exact"},{"name":"anaplastic large cell lymphoma","type":"exact"},{"name":"primary systemic ALCL","type":"exact"},{"name":"sACL","type":"exact"}],"termid":"MONDO:0020325","xrefs":{"Monarch":{"xref_id":"0020325"}}}


id: SO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The determinant of selective removal (DSR) motif consists of repeats of U(U/C)AAAC. The motif targets meiotic transcripts for removal during mitosis via the exosome.","definition_xrefs":["PMID:22645662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSR_motif","synonyms":[{"name":"DSR motif","type":"exact"}],"termid":"SO:0002005"}


id: GO:0010603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the aggregation, arrangement and bonding together of proteins and RNA molecules to form a cytoplasmic mRNA processing body.","definition_xrefs":["GOC:tb","GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"P-body assembly","termid":"GO:0033962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cytoplasmic mRNA processing body assembly","termid":"GO:0010603"}


id: PBO:0063781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 6","termid":"PBO:0063781"}


id: GO:0097320
data:
  {"annotated_genes":["SJAG_00185","SJAG_00700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73940,75712],"is_not":false,"summary":null,"term":"GO:0097320"}]},"cv_name":"biological_process","definition":"A membrane tubulation process occurring in a plasma membrane.","definition_xrefs":["PMID:20730103","GOC:pr","PMID:15252009","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane tubulation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"membrane tubulation","type":"broad"},{"name":"vesicle scission","type":"related"}],"termid":"GO:0097320","terms_by_termid":{"GO:0097320":null}}


id: GO:0010357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-nonaprenyl diphosphate + H+ + homogentisate = 2-methyl-6-all-trans-nonaprenylbenzene-1,4-diol + CO2 + diphosphate. 2-methyl-6-solanyl-1,4-benzoquinonone is also known as 2-methyl-6-solanesylplastoquinol and all-trans-nonaprenyl diphosphate as solanesyl diphosphate.","definition_xrefs":["PMID:16989822","RHEA:37995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"homogentisate solanesyltransferase activity","secondary_identifiers":["MetaCyc:RXN-2761","EC:2.5.1.117"],"synonyms":[{"name":"HST activity","type":"exact"},{"name":"homogentisate solanyltransferase activity","type":"exact"}],"termid":"GO:0010357"}


id: PBO:0045533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 3L","termid":"PBO:0045533"}


id: PBO:0046745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOC3 antisense RNA 1","termid":"PBO:0046745"}


id: GO:0004206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-10 activity (obsolete GO:0004206)","synonyms":[{"name":"caspase-10 activity","type":"exact"}],"termid":"GO:0004206"}


id: MONDO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung with reduced markings on its chest radiograph and increased areas of transradiancy (hyperlucency). A hyperlucent lung is usually associated with pulmonary emphysema or pneumothorax.","definition_xrefs":["MESH:D019568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlucent lung","secondary_identifiers":["DOID:10032","UMLS:C0524799","MEDGEN:101178"],"termid":"MONDO:0000925","xrefs":{"Monarch":{"xref_id":"0000925"}}}


id: PBO:0066703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of 7SK nuclear ribonucleoprotein","termid":"PBO:0066703"}


id: PBO:0054161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1530","termid":"PBO:0054161"}


id: FYPO:0002218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and have germ tubes with normal morphology (i.e. size, shape, and structure) that do not septate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, normal unseptated germ tube morphology (obsolete FYPO:0002218)","synonyms":[{"name":"inviable germinated spore population, normal unseptated germ tube morphology","type":"exact"}],"termid":"FYPO:0002218"}


id: PBO:0079123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid stimulating hormone subunit beta","termid":"PBO:0079123"}


id: GO:0043498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell surface binding (obsolete GO:0043498)","synonyms":[{"name":"cell surface binding","type":"exact"}],"termid":"GO:0043498"}


id: MONDO:0043904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of LEISHMANIASIS, CUTANEOUS caused by Leishmania aethiopica in Ethiopia and Kenya, L. pifanoi in Venezuela, L. braziliensis in South America, and L. mexicana in Central America. This disease is characterized by massive dissemination of skin lesions without visceral involvement.","definition_xrefs":["MESH:D016774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous leishmaniasis","termid":"MONDO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"leishmaniasis, diffuse cutaneous","secondary_identifiers":["UMLS:C0085311","SCTID:38573008","MEDGEN:39020"],"synonyms":[{"name":"Leishmaniases, diffuse cutaneous","type":"related"},{"name":"cheloid leishmaniasis","type":"related"},{"name":"cutaneous Leishmaniases, diffuse","type":"related"},{"name":"cutaneous leishmaniasis, diffuse","type":"related"},{"name":"dcl - diffuse cutaneous leishmaniasis","type":"related"},{"name":"diffuse cutaneous Leishmaniases","type":"related"},{"name":"diffuse cutaneous leishmaniasis","type":"exact"},{"name":"leproid leishmaniasis","type":"related"},{"name":"lepromatous cutaneous leishmaniasis","type":"related"}],"termid":"MONDO:0043904","xrefs":{"Monarch":{"xref_id":"0043904"}}}


id: GO:0051147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle cell differentiation.","definition_xrefs":["CL:0000187","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle cell differentiation","termid":"GO:0051147"}


id: PBO:0036471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth3 (predicted)","termid":"PBO:0036471"}


id: GO:0042964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the reduction of thioredoxin, a small disulfide-containing redox protein that serves as a general protein disulfide oxidoreductase.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin reduction (obsolete GO:0042964)","synonyms":[{"name":"thioredoxin anabolism","type":"exact"},{"name":"thioredoxin biosynthesis","type":"exact"},{"name":"thioredoxin formation","type":"exact"},{"name":"thioredoxin synthesis","type":"exact"}],"termid":"GO:0042964"}


id: PBO:0080009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 pseudogene X-linked","termid":"PBO:0080009"}


id: PBO:0058797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7703","termid":"PBO:0058797"}


id: GO:0097213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.","definition_xrefs":["GOC:yaf","PMID:20544854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"},{"relation_name":"is_a","term_name":"lysosomal membrane organization","termid":"GO:0097212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of lysosomal membrane permeability","synonyms":[{"name":"regulation of lysosome membrane permeability","type":"exact"}],"termid":"GO:0097213"}


id: GO:0045113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of integrin biosynthetic process","synonyms":[{"name":"regulation of integrin anabolism","type":"exact"},{"name":"regulation of integrin biosynthesis","type":"exact"},{"name":"regulation of integrin formation","type":"exact"},{"name":"regulation of integrin synthesis","type":"exact"}],"termid":"GO:0045113"}


id: PBO:0065838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 3","termid":"PBO:0065838"}


id: MONDO:0006758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycobacterium infections of the female reproductive tract (genitalia, female).","definition_xrefs":["MESH:D014384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female genital tuberculosis","secondary_identifiers":["MEDGEN:21724","EFO:1000935","SCTID:74181004","UMLS:C0041311","MedDRA:10061150"],"termid":"MONDO:0006758","xrefs":{"Monarch":{"xref_id":"0006758"}}}


id: MONDO:0006409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poorly cohesive gastric adenocarcinoma characterized by malignant cells containing intracytoplasmic mucin.","definition_xrefs":["NCIT:C5250"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diffuse gastric adenocarcinoma","termid":"MONDO:0005017"},{"relation_name":"is_a","term_name":"gastric adenocarcinoma","termid":"MONDO:0005036"},{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"signet ring cell gastric adenocarcinoma","secondary_identifiers":["ONCOTREE:SSRCC","UMLS:C1335965","EFO:1000524","MEDGEN:234782","DOID:8025"],"synonyms":[{"name":"gastric signet Ring cell adenocarcinoma","type":"exact"},{"name":"gastric signet ring cell adenocarcinoma","type":"exact"},{"name":"signet Ring cell adenocarcinoma of stomach","type":"exact"},{"name":"signet Ring cell adenocarcinoma of the stomach","type":"exact"},{"name":"signet Ring cell stomach adenocarcinoma","type":"exact"},{"name":"signet ring cell carcinoma of the stomach","type":"related"},{"name":"signet ring cell gastric adenocarcinoma","type":"exact"}],"termid":"MONDO:0006409","xrefs":{"Monarch":{"xref_id":"0006409"}}}


id: GO:0003269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in regulation of secondary heart field cardioblast proliferation (obsolete GO:0003269)","synonyms":[{"name":"BMP signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"BMP signalling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003269"}


id: PR:P17477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P1-alpha 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.13c","synonyms":[{"name":"A3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp102","type":"exact"}],"termid":"PR:P17477"}


id: MONDO:0010886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal anomaly involving deletion of chromosome band 2q37 and manifests as three major clinical findings: developmental delay, skeletal malformations and facial dysmorphism.","definition_xrefs":["Orphanet:1001"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2q37 microdeletion syndrome","secondary_identifiers":["MEDGEN:419169","DOID:0111704","ICD9:758.39","SCTID:702357000","NCIT:C129021","UMLS:C2931817","DECIPHER:44","GARD:10202","MESH:C538317","OMIM:600430"],"synonyms":[{"name":"2q37 deletion syndrome","type":"related"},{"name":"2q37 microdeletion syndrome","type":"exact"},{"name":"2q37 monosomy","type":"exact"},{"name":"Albright hereditary osteodystrophy type 3","type":"exact"},{"name":"Albright hereditary osteodystrophy-like syndrome","type":"exact"},{"name":"BDMR","type":"exact"},{"name":"Del(2)(q37)","type":"exact"},{"name":"brachydactyly intellectual disability syndrome","type":"exact"},{"name":"brachydactyly mental retardation syndrome","type":"exact"},{"name":"brachydactyly-intellectual disability syndrome","type":"exact"},{"name":"brachydactyly-mental retardation syndrome","type":"related"},{"name":"chromosome 2q37 deletion syndrome","type":"related"},{"name":"deletion 2q37","type":"exact"},{"name":"deletion 2q37-qter","type":"exact"},{"name":"monosomy 2q37-qter","type":"exact"}],"termid":"MONDO:0010886","xrefs":{"Monarch":{"xref_id":"0010886"}}}


id: FYPO:0001119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell tapers at one end to a diameter smaller than the other in the vegetative growth phase of the life cycle. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tapered cell","termid":"FYPO:0000014"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"tapered vegetative cell","synonyms":[{"name":"bottle-shaped vegetative cell","type":"exact"},{"name":"bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, bottle/skittle during vegetative growth","type":"exact"},{"name":"skittle-shaped cell during vegetative growth","type":"exact"},{"name":"tapered cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001119"}


id: PBO:0090922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex beta subunit Tfg2","termid":"PBO:0090922"}


id: MONDO:0017901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic variant of Mendelian susceptibility to mycobacterial diseases characterized by a partial deficiency in IFN-gammaR1, leading to a residual response to IFN-gamma and, consequently, to recurrent, moderately severe infections with bacillus Calmette-Guerin (BCG) and other environmental mycobacteria (EM).","definition_xrefs":["Orphanet:319569"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immunodeficiency 27A","termid":"MONDO:0008856"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive Mendelian susceptibility to mycobacterial diseases due to partial IFNgammaR1 deficiency","secondary_identifiers":["MEDGEN:1379275","UMLS:C4511091"],"synonyms":[{"name":"IFNGR1 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"autosomal recessive MSMD due to partial IFNgammaR1 deficiency","type":"exact"},{"name":"autosomal recessive MSMD due to partial interferon gamma receptor 1 deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in IFNGR1","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to partial interferon gamma receptor 1 deficiency","type":"exact"}],"termid":"MONDO:0017901","xrefs":{"Monarch":{"xref_id":"0017901"}}}


id: GO:0050674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of urothelial cells, resulting in the expansion of a cell population. Urothelial cells make up a layer of transitional epithelium in the wall of the bladder, ureter, and renal pelvis, external to the lamina propria.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urothelial cell proliferation","termid":"GO:0050674"}


id: PBO:0084629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methylthioadenosine phosphorylase (MTAP); catalyzes the initial step in the methionine salvage pathway; affects polyamine biosynthesis through regulation of ornithine decarboxylase (Spe1p) activity; regulates ADH2 gene expression","termid":"PBO:0084629"}


id: PR:O13695
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11G7.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein C11G7.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.01","synonyms":[{"name":"Spom972h-SPAC11G7.01","type":"exact"}],"termid":"PR:O13695"}


id: MONDO:0800120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lung condition characterized by often predominantly unilateral lung hyperlucency and air trapping. The condition is a post-infectious form of bronchiolitis obliterans and typically follows a viral respiratory infection in infancy and childhood. Adenovirus infection is considered the most usual epidemiology. In SJS, the involved lung or portion of the lung does not grow normally and is slightly smaller than the opposite lung: in particular, peripheral branches of the pulmonary vessels do not develop, and vasculature is arreseted at the stage at which the infection occurred. Patients respond well to management with bronchodilators, even though this is not primarily a bronchial abnormality.","definition_xrefs":["PMID:32119329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiolitis","termid":"MONDO:0002465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mac-Leod-Swyer-James-Syndrome","synonyms":[{"name":"SJS","type":"exact"},{"name":"Swyer-James-(Macleod)-Syndrome","type":"exact"}],"termid":"MONDO:0800120","xrefs":{"Monarch":{"xref_id":"0800120"}}}


id: GO:2000159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in heart morphogenesis (obsolete GO:2000159)","termid":"GO:2000159"}


id: PBO:0091811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in ER insertion of tail-anchored membrane proteins","termid":"PBO:0091811"}


id: PBO:0073845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 8 member B1","termid":"PBO:0073845"}


id: PBO:0063400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin like","termid":"PBO:0063400"}


id: PBO:0071345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 3","termid":"PBO:0071345"}


id: GO:0052678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-copalyl diphosphate = abieta-8(14),12-diene + diphosphate.","definition_xrefs":["RHEA:25548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"levopimaradiene synthase activity","secondary_identifiers":["MetaCyc:RXN-8511","EC:4.2.3.32","KEGG_REACTION:R06302"],"synonyms":[{"name":"ent-copalyl-diphosphate diphosphate-lyase [ent-abieta-8(14),12-diene-forming] activity","type":"exact"}],"termid":"GO:0052678"}


id: GO:0072082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the kidney nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of proximal tubule identity","termid":"GO:0072082"}


id: PBO:0088307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec63","termid":"PBO:0088307"}


id: GO:0043431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol + S-adenosyl-L-methionine = ubiquinol + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:1479344","GOC:jl","PMID:11583838"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone methyltransferase activity (obsolete GO:0043431)","synonyms":[{"name":"2-octaprenyl-6-hydroxy phenol methylase activity","type":"exact"},{"name":"3-demethylubiquinone-9 3-methyltransferase activity","type":"exact"}],"termid":"GO:0043431"}


id: PBO:0055895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 15","termid":"PBO:0055895"}


id: PBO:0042133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calicin","termid":"PBO:0042133"}


id: PBO:0085093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear export factor, exportin; major karyopherin involved in export of proteins, RNAs, and ribosomal subunits from the nucleus","termid":"PBO:0085093"}


id: PBO:0048106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far upstream element binding protein 1","termid":"PBO:0048106"}


id: PBO:0090350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2","termid":"PBO:0090350"}


id: PBO:0090345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop5","termid":"PBO:0090345"}


id: MONDO:0018240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPV4-related bone disorder","secondary_identifiers":["GARD:21577","MEDGEN:1842686","Orphanet:364820","NANDO:2201021","UMLS:C5680977"],"synonyms":[{"name":"TRPV4-related skeletal dysplasia","type":"exact"}],"termid":"MONDO:0018240","xrefs":{"Monarch":{"xref_id":"0018240"}}}


id: MONDO:1011019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"L-2-hydroxyglutaricacidemia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-2-hydroxyglutaricacidemia, non-human animal","termid":"MONDO:1010244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-hydroxyglutaricacidemia, domestic cat","secondary_identifiers":["OMIA:001371-9685"],"termid":"MONDO:1011019","xrefs":{"Monarch":{"xref_id":"1011019"}}}


id: GO:0140249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein at a postsynapse.","definition_xrefs":["PMID:17062563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process at synapse","termid":"GO:0140246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"protein catabolic process at postsynapse","termid":"GO:0140249"}


id: PBO:0076031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 31","termid":"PBO:0076031"}


id: PBO:0005763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf22","termid":"PBO:0005763"}


id: MONDO:0001025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of gonococcal seminal vesiculitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonococcal seminal vesiculitis","termid":"MONDO:0001027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seminal vesicle chronic gonorrhea","secondary_identifiers":["MEDGEN:509202","ICD9:098.34","DOID:10399","SCTID:23975003","UMLS:C0153205"],"synonyms":[{"name":"chronic gonococcal seminal vesiculitis","type":"exact"},{"name":"gonococcal seminal vesiculitis, chronic","type":"exact"}],"termid":"MONDO:0001025","xrefs":{"Monarch":{"xref_id":"0001025"}}}


id: PBO:0086426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative hexokinase; transcript is upregulated during sporulation and the unfolded protein response; YLR446W is not an essential gene","termid":"PBO:0086426"}


id: GO:0009881
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[121532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009882"}]},"cv_name":"molecular_function","definition":"The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation.","definition_xrefs":["GOC:go_curators","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"photoreceptor activity","references_by_uniquename":{"PMID:23873862":null},"synonyms":[{"name":"UV-sensitive opsin","type":"narrow"},{"name":"blue-sensitive opsin","type":"narrow"},{"name":"green-sensitive opsin","type":"narrow"},{"name":"long-wave-sensitive opsin","type":"narrow"},{"name":"opsin","type":"narrow"},{"name":"red-sensitive opsin","type":"narrow"},{"name":"short-wave-sensitive opsin","type":"narrow"},{"name":"violet-sensitive opsin","type":"narrow"}],"termid":"GO:0009881","terms_by_termid":{"GO:0009882":null}}


id: MONDO:1012608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any unconjugated hyperbilirubinemia due to an increase in the bilirubin turnover/production rate and/or decreased hepatic conjugation during fasting that occurs in Bolivian squirrel monkey.","definition_xrefs":["PMID:1316506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperbilirubinemia, non-human animal","termid":"MONDO:1012974"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasting unconjugated hyperbilirubinemia, Bolivian squirrel monkey","secondary_identifiers":["OMIA:000496-27679"],"synonyms":[{"name":"hyperbilirubinaemia I, Bolivian squirrel monkey","type":"related"}],"termid":"MONDO:1012608","xrefs":{"Monarch":{"xref_id":"1012608"}}}


id: GO:1905226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of adhesion of symbiont to host epithelial cell.","definition_xrefs":["PMID:15659068","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adhesion of symbiont to host epithelial cell (obsolete GO:1905226)","termid":"GO:1905226"}


id: MONDO:0000455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited ocular disorder characterized by the loss of cone cells, the photoreceptors responsible for both central and color vision.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone dystrophy","secondary_identifiers":["NANDO:1200936","SCTID:312917007","UMLS:C0730290","ICD9:362.75","MESH:D000077765","Orphanet:1871","DOID:0050795","GARD:11897","MEDGEN:676499"],"synonyms":[{"name":"cone dystrophy","type":"exact"},{"name":"progressive cone dystrophy","type":"narrow"},{"name":"retinal cone dystrophy","type":"related"},{"name":"stationary cone dystrophy","type":"narrow"}],"termid":"MONDO:0000455","xrefs":{"Monarch":{"xref_id":"0000455"}}}


id: PBO:0029771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_vegetative_cell_population_(obsolete_FYPO:0002468)","termid":"PBO:0029771"}


id: PBO:0057492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 610","termid":"PBO:0057492"}


id: PBO:0088440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf1","termid":"PBO:0088440"}


id: GO:0098733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is part of or has some part in a hemidesmosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"hemidesmosome associated protein complex","termid":"GO:0098733"}


id: MONDO:0011877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant osteopetrosis type I (ADO I) is a sclerosing bone disorder characterized by skeletal densification that predominantly involves the cranial vault.","definition_xrefs":["Orphanet:2783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant osteopetrosis","termid":"MONDO:0020645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant osteopetrosis 1","secondary_identifiers":["DOID:0110937","MESH:C536056","OMIM:607634","UMLS:C1843330","GARD:4151","MEDGEN:335932"],"synonyms":[{"name":"LRP5 osteopetrosis (disease)","type":"exact"},{"name":"OPTA1","type":"exact"},{"name":"autosomal dominant osteopetrosis type 1","type":"exact"},{"name":"osteopetrosis (disease) caused by mutation in LRP5","type":"exact"},{"name":"osteopetrosis autosomal dominant type 1","type":"related"},{"name":"osteopetrosis, autosomal dominant 1","type":"related"},{"name":"osteopetrosis, autosomal dominant type 1","type":"exact"},{"name":"osteopetrosis, autosomal dominant, type 1","type":"related"}],"termid":"MONDO:0011877","xrefs":{"Monarch":{"xref_id":"0011877"}}}


id: GO:0010921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or frequency of phosphatase activity. Phosphatases catalyze the hydrolysis of phosphoric monoesters, releasing phosphate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dephosphorylation","termid":"GO:0035303"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatase activity","termid":"GO:0010921"}


id: MONDO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"},{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"eyelid degenerative disorder","secondary_identifiers":["DOID:10120","ICD9:374.50","MEDGEN:509851","SCTID:1112003","UMLS:C0155209"],"synonyms":[{"name":"eyelid neurodegenerative disease","type":"exact"},{"name":"neurodegenerative disease of eyelid","type":"exact"}],"termid":"MONDO:0000941","xrefs":{"Monarch":{"xref_id":"0000941"}}}


id: PBO:0031422
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_viability","termid":"PBO:0031422"}


id: PBO:0090670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial CH-OH group oxidoreductase, human RTN4IP1 ortholog, implicated in mitochondrial organization or tethering","termid":"PBO:0090670"}


id: MONDO:0859008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromatosis/schwannomatosis","secondary_identifiers":["UMLS:C5816781","MEDGEN:1843398","Orphanet:634518"],"termid":"MONDO:0859008","xrefs":{"Monarch":{"xref_id":"0859008"}}}


id: SO:0000780
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000780 transposable_element_attribute (obsolete SO:0000780)","termid":"SO:0000780"}


id: GO:0070413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving trehalose that occur as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah","PMID:9797333","GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose metabolism in response to stress (obsolete GO:0070413)","synonyms":[{"name":"trehalose metabolic process involved in response to stress","type":"exact"}],"termid":"GO:0070413"}


id: PBO:0000574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG repeat","termid":"PBO:0000574"}


id: GO:0045319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process during cotranslational membrane targeting wherein proteins move across a membrane. This process is independent of SRP and signal recognition.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete SRP-independent cotranslational protein-membrane targeting, translocation (obsolete GO:0045319)","synonyms":[{"name":"SRP-independent cotranslational membrane targeting, translocation","type":"exact"},{"name":"SRP-independent cotranslational protein-membrane targeting, translocation","type":"exact"}],"termid":"GO:0045319"}


id: PBO:0059373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 6","termid":"PBO:0059373"}


id: GO:0051916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to granulocyte colony-stimulating factor, G-CSF.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"granulocyte colony-stimulating factor binding","synonyms":[{"name":"G-CSF binding","type":"exact"},{"name":"granulocyte colony stimulating factor binding","type":"exact"}],"termid":"GO:0051916"}


id: PBO:0085082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear dsRNA-specific ribonuclease (RNase III); involved in rDNA transcription, rRNA processing and U2 snRNA 3' end formation by cleavage of a stem-loop structure at the 3' end of U2 snRNA; involved in polyadenylation-independent transcription termination; involved in the cell wall stress response, regulating the degradation of cell wall integrity and morphogenesis checkpoint genes","termid":"PBO:0085082"}


id: MONDO:0010025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-obesity syndrome","secondary_identifiers":["MEDGEN:341410","OMIM:269870","MESH:C564821","UMLS:C1849235"],"synonyms":[{"name":"SSOS","type":"related"},{"name":"short stature-obesity syndrome","type":"exact"}],"termid":"MONDO:0010025","xrefs":{"Monarch":{"xref_id":"0010025"}}}


id: MONDO:0001348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Lyme disease (obsolete MONDO:0001348)","termid":"MONDO:0001348","xrefs":{"Monarch":{"xref_id":"0001348"}}}


id: PBO:0005227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex SMC subunit Smc6","termid":"PBO:0005227"}


id: PR:O74560
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- raf2 gene.","definition_xrefs":["UniProtKB:O74560","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rik1-associated factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.07c","synonyms":[{"name":"De-localization of swi6 protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-raf2","type":"exact"},{"name":"cryptic loci regulator 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74560"}


id: PBO:0061696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 214","termid":"PBO:0061696"}


id: MONDO:0000462
data:
  {"annotated_genes":["SJAG_04003","SJAG_04601","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"},{"annotations":[87698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[87437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958176"}]},"cv_name":"mondo","definition":"A disease involving the ocular adnexa.","definition_xrefs":["MONDO:patterns/location_top"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region","termid":"MONDO:0002022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03453":null,"SJAG_04003":null,"SJAG_04601":null},"genotype_count":0,"is_obsolete":false,"name":"eye adnexa disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:713201","SCTID:118941004","UMLS:C1290855","EFO:0009546","DOID:0050815","ICD10WHO:H00-H06"],"synonyms":[{"name":"disease of ocular adnexa","type":"exact"},{"name":"disease or disorder of ocular adnexa","type":"exact"},{"name":"disorder of ocular adnexa","type":"exact"},{"name":"ocular adnexa disease","type":"exact"},{"name":"ocular adnexa disease or disorder","type":"exact"}],"termid":"MONDO:0000462","terms_by_termid":{"MONDO:0008097":null,"MONDO:0010912":null,"MONDO:0958176":null},"xrefs":{"Monarch":{"xref_id":"0000462"}}}


id: GO:1905276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial tube formation.","definition_xrefs":["GOC:bhm","GO_REF:0000058","PMID:25745997","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial tube formation","termid":"GO:1905276"}


id: PBO:0030918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cortex_morphology_during_vegetative_growth","termid":"PBO:0030918"}


id: PBO:0073187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein P","termid":"PBO:0073187"}


id: PBO:0109382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 13","termid":"PBO:0109382"}


id: PATO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed mesiolaterally.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesiolateral orientation","termid":"PATO:0002524"}


id: MONDO:0009673
data:
  {"annotated_genes":["SJAG_03894"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88257],"is_not":false,"summary":null,"term":"MONDO:0009673"}]},"cv_name":"mondo","definition":"Proximal spinal muscular atrophy type 2 (SMA2) is a chronic infantile form of proximal spinal muscular atrophy characterized by muscle weakness and hypotonia resulting from the degeneration and loss of the lower motor neurons in the spinal cord and the brain stem nuclei.","definition_xrefs":["Orphanet:83418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal spinal muscular atrophy","termid":"MONDO:0019079"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy, type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:95975","DOID:0050530","SCTID:128212001","OMIM:253550","GARD:4945","ICD9:335.19","MESH:C536879","UMLS:C0393538","icd11.foundation:867148636","NANDO:1200005"],"synonyms":[{"name":"Dubowitz disease","type":"related"},{"name":"Intermediate spinal muscular atrophy","type":"exact"},{"name":"SMA II","type":"related"},{"name":"SMA type 2","type":"exact"},{"name":"SMA type II","type":"exact"},{"name":"SMA-II","type":"exact"},{"name":"SMA2","type":"exact"},{"name":"Sma 2","type":"related"},{"name":"chronic infantile spinal muscular atrophy","type":"exact"},{"name":"chronic spinal muscular atrophy","type":"exact"},{"name":"muscular atrophy, spinal, Intermediate type","type":"related"},{"name":"muscular atrophy, spinal, infantile chronic form","type":"exact"},{"name":"muscular atrophy, spinal, intermediate type","type":"exact"},{"name":"proximal spinal muscular atrophy type 2","type":"related"},{"name":"spinal muscular atrophy type 2","type":"related"},{"name":"spinal muscular atrophy type II","type":"related"},{"name":"spinal muscular atrophy, type 2","type":"related"},{"name":"spinal muscular atrophy, type II","type":"exact"},{"name":"spinal muscular atrophy-2","type":"exact"}],"termid":"MONDO:0009673","terms_by_termid":{"MONDO:0009673":null},"xrefs":{"Monarch":{"xref_id":"0009673"}}}


id: MONDO:0020629
data:
  {"annotated_genes":["SJAG_03898","SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008876"},{"annotations":[88231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020628"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03898":null,"SJAG_04816":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, growth restriction and increased sister chromatid exchange","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:210900"],"synonyms":[{"name":"MGRISCE","type":"exact"}],"termid":"MONDO:0020629","terms_by_termid":{"MONDO:0008876":null,"MONDO:0020628":null},"xrefs":{"Monarch":{"xref_id":"0020629"}}}


id: PBO:0048999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC6 antisense RNA 1","termid":"PBO:0048999"}


id: FYPO:0005265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of lead ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to lead","synonyms":[{"name":"resistance to lead during mitotic cell cycle","type":"related"},{"name":"resistance to lead during vegetative growth","type":"exact"},{"name":"resistance to lead ions","type":"exact"},{"name":"resistant to lead","type":"exact"}],"termid":"FYPO:0005265"}


id: GO:0045199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of the apicobasal polarity of an epithelial cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of apical/basal cell polarity","termid":"GO:0035090"},{"relation_name":"is_a","term_name":"establishment or maintenance of epithelial cell apical/basal polarity","termid":"GO:0045197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"maintenance of epithelial cell apical/basal polarity","termid":"GO:0045199"}


id: PBO:0066760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 58","termid":"PBO:0066760"}


id: PBO:0058404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4774","termid":"PBO:0058404"}


id: MOD:00315
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts five L-cysteine residues, an L-histidine residue and a one-nickel four-iron five-sulfur cluster to pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide.","definition_xrefs":["RESID:AA0310","PubMed:11509720","PubMed:2550436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"nickel containing modified residue","termid":"MOD:00741"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide","synonyms":[{"name":"METAL Nickel-iron-sulfur (Ni-4Fe-5S)","type":"exact"},{"name":"METAL Nickel-iron-sulfur (Ni-4Fe-5S); via tele nitrogen","type":"exact"},{"name":"Ni-4Fe-5S cluster","type":"exact"},{"name":"carbon monoxide dehydrogenase nickel-iron cofactor","type":"exact"},{"name":"mu-1:2kappaS-sulfido-mu3-1:3:5kappaS-sulfido-mu3-2:3:4kappaS-sulfido-mu3-2:4:5kappaS-sulfido-mu3-3:4:5kappaS-sulfido-N1'-histidino-S-cysteinyl-1-iron-S-cysteinyl-2-nickel-3,4,5-tris-(S-cysteinyl iron)","type":"exact"},{"name":"pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide","type":"exact"}],"termid":"MOD:00315"}


id: PBO:0044765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 49","termid":"PBO:0044765"}


id: PR:O74184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A target of rapamycin complex subunit LST8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02946","PANTHER:PTHR19842:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein wat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.05c","secondary_identifiers":["UniProtKB:O74184"],"synonyms":[{"name":"Spom972h-MLST8","type":"exact"},{"name":"WD repeat-containing protein pop3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74184"}


id: PBO:0031021
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level","termid":"PBO:0031021"}


id: GO:0051548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of keratinocyte migration.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell migration","termid":"GO:0010633"},{"relation_name":"is_a","term_name":"regulation of keratinocyte migration","termid":"GO:0051547"},{"relation_name":"negatively_regulates","term_name":"keratinocyte migration","termid":"GO:0051546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of keratinocyte migration","synonyms":[{"name":"down regulation of keratinocyte migration","type":"exact"},{"name":"down-regulation of keratinocyte migration","type":"exact"},{"name":"downregulation of keratinocyte migration","type":"exact"},{"name":"inhibition of keratinocyte migration","type":"narrow"}],"termid":"GO:0051548"}


id: PBO:0027086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_midzone_during_anaphase","termid":"PBO:0027086"}


id: GO:0008444
data:
  {"annotated_genes":["SJAG_00168"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73003],"is_not":false,"summary":null,"term":"GO:0008444"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + CDP-diacylglycerol = 3-(3-sn-phosphatidyl)-sn-glycerol 1-phosphate + CMP + H+.","definition_xrefs":["RHEA:12593","EC:2.7.8.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00168":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016780","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PHOSPHAGLYPSYN-RXN","KEGG_REACTION:R01801","Reactome:R-HSA-1482939"],"synonyms":[{"name":"3-phosphatidyl-1'-glycerol-3'-phosphate synthase activity","type":"related"},{"name":"CDP-diacylglycerol:sn-glycerol-3-phosphate 3-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol-sn-glycerol-3-phosphate 3-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol:glycerol-3-phosphate phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol:sn-glycero-3-phosphate phosphatidyltransferase activity","type":"related"},{"name":"PGP synthase activity","type":"related"},{"name":"cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):sn-glycerol-3-phosphate phosphatidyltransferase activity","type":"related"},{"name":"glycerol 3-phosphate phosphatidyltransferase activity","type":"related"},{"name":"glycerol phosphate phosphatidyltransferase activity","type":"related"},{"name":"glycerophosphate phosphatidyltransferase activity","type":"related"},{"name":"phosphatidylglycerol phosphate synthase activity","type":"related"},{"name":"phosphatidylglycerol phosphate synthetase activity","type":"related"},{"name":"phosphatidylglycerolphosphate synthase activity","type":"related"},{"name":"phosphatidylglycerophosphate synthase activity","type":"related"},{"name":"phosphatidylglycerophosphate synthetase activity","type":"related"},{"name":"sn-glycerol-3-phosphate phosphatidyltransferase activity","type":"related"}],"termid":"GO:0008444","terms_by_termid":{"GO:0008444":null}}


id: PBO:0014300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific protein","termid":"PBO:0014300"}


id: FYPO:0004060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which endocytosis does not occur during meiotic interphase II, i.e. the phase between the end of meiosis I cytokinesis the beginning of meiosis II prophase. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["GO:0044844","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished endocytosis during meiotic interphase II","synonyms":[{"name":"abolished actin-mediated endocytosis during meiotic interphase II","type":"exact"},{"name":"abolished protein internalization during meiotic interphase II","type":"narrow"},{"name":"absent endocytosis during meiotic interphase II","type":"exact"},{"name":"endocytosis abolished during meiotic interphase II","type":"exact"}],"termid":"FYPO:0004060"}


id: PBO:0076645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 2","termid":"PBO:0076645"}


id: PR:O14133
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An arginyl-tRNA--protein transferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21367:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginyl-tRNA--protein transferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.07c","secondary_identifiers":["UniProtKB:O14133"],"synonyms":[{"name":"R-transferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATE1","type":"exact"},{"name":"arginine-tRNA--protein transferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"arginyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14133"}


id: GO:0044178
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the host cell Golgi apparatus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell endomembrane system","termid":"GO:0033645"},{"relation_name":"part_of","term_name":"host cell Golgi apparatus","termid":"GO:0044177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell Golgi membrane","synonyms":[{"name":"host Golgi membrane","type":"exact"}],"termid":"GO:0044178"}


id: PBO:0085249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Perilipin, involved in formation and stability of lipid droplets; expression pattern suggests a role in respiratory growth; computational analysis of large-scale protein-protein interaction data suggests a role in ATP/ADP exchange","termid":"PBO:0085249"}


id: MONDO:0010707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paine syndrome","secondary_identifiers":["UMLS:C1412041","MEDGEN:234691","MESH:C538101","OMIM:311400"],"synonyms":[{"name":"Paine syndrome","type":"exact"},{"name":"Seemanova syndrome 1","type":"related"},{"name":"microcephaly with spastic diplegia","type":"related"}],"termid":"MONDO:0010707","xrefs":{"Monarch":{"xref_id":"0010707"}}}


id: PBO:0077313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 51","termid":"PBO:0077313"}


id: PBO:0086242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that localizes to the mitochondrial intermembrane space; localizes via the Mia40p-Erv1p system; contains twin cysteine-x(9)-cysteine motifs","termid":"PBO:0086242"}


id: GO:0036195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a muscle cell projection.","definition_xrefs":["GOC:kmv","PMID:22464329","CL:0000187","PMID:15930100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"muscle cell projection","termid":"GO:0036194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"muscle cell projection membrane","termid":"GO:0036195"}


id: GO:0042187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-xylene (1,4-dimethylbenzene), a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"p-xylene metabolic process","termid":"GO:0018951"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-xylene catabolic process","synonyms":[{"name":"p-xylene breakdown","type":"exact"},{"name":"p-xylene catabolism","type":"exact"},{"name":"p-xylene degradation","type":"exact"},{"name":"para-xylene catabolic process","type":"exact"},{"name":"para-xylene catabolism","type":"exact"}],"termid":"GO:0042187"}


id: GO:1900143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oligodendrocyte apoptotic process.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glial cell apoptotic process","termid":"GO:0034352"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte apoptotic process","termid":"GO:1900141"},{"relation_name":"positively_regulates","term_name":"oligodendrocyte apoptotic process","termid":"GO:0097252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oligodendrocyte apoptotic process","synonyms":[{"name":"activation of oligodendrocyte apoptosis","type":"narrow"},{"name":"activation of oligodendrocyte apoptotic process","type":"narrow"},{"name":"positive regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"up regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"up regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"up-regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"up-regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"upregulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"upregulation of oligodendrocyte apoptotic process","type":"exact"}],"termid":"GO:1900143"}


id: GO:1904719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of AMPA glutamate receptor clustering.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21558424","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of postsynaptic membrane organization","termid":"GO:1901628"},{"relation_name":"is_a","term_name":"positive regulation of receptor clustering","termid":"GO:1903911"},{"relation_name":"is_a","term_name":"regulation of AMPA glutamate receptor clustering","termid":"GO:1904717"},{"relation_name":"positively_regulates","term_name":"AMPA glutamate receptor clustering","termid":"GO:0097113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of AMPA glutamate receptor clustering","synonyms":[{"name":"activation of AMPA glutamate receptor clustering","type":"narrow"},{"name":"activation of AMPA receptor clustering","type":"narrow"},{"name":"activation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"narrow"},{"name":"positive regulation of AMPA receptor clustering","type":"exact"},{"name":"positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"up regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"up regulation of AMPA receptor clustering","type":"exact"},{"name":"up regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"up-regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"up-regulation of AMPA receptor clustering","type":"exact"},{"name":"up-regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"upregulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"upregulation of AMPA receptor clustering","type":"exact"},{"name":"upregulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"}],"termid":"GO:1904719"}


id: PBO:0066960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 262","termid":"PBO:0066960"}


id: MONDO:0020089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of lipodystrophy (disease) that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"},{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"acquired lipodystrophy","secondary_identifiers":["UMLS:C0877192","MEDGEN:798705","GARD:12602","MedDRA:10049287","Orphanet:98307"],"synonyms":[{"name":"acquired lipodystrophy (disease)","type":"exact"}],"termid":"MONDO:0020089","xrefs":{"Monarch":{"xref_id":"0020089"}}}


id: GO:0048533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized floral cell acquires the specialized features of a sporocyte. Sporocytes are the haploid spores of angiosperms. Once formed, they undergo meiotic divisions to form microspores and megaspores.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocyte differentiation","synonyms":[{"name":"sporocyte development","type":"narrow"},{"name":"sporocyte morphogenesis","type":"related"}],"termid":"GO:0048533"}


id: GO:0046634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-beta T cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"regulates","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-beta T cell activation","synonyms":[{"name":"regulation of alpha-beta T lymphocyte activation","type":"exact"},{"name":"regulation of alpha-beta T-cell activation","type":"exact"},{"name":"regulation of alpha-beta T-lymphocyte activation","type":"exact"}],"termid":"GO:0046634"}


id: GO:0018364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group to a glutamine residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glutamine methylation","termid":"GO:0018364"}


id: PBO:0065109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C delta","termid":"PBO:0065109"}


id: MONDO:0019987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital and infantile nephrotic syndrome (obsolete MONDO:0019987)","secondary_identifiers":["Orphanet:97556"],"termid":"MONDO:0019987","xrefs":{"Monarch":{"xref_id":"0019987"}}}


id: PBO:0046365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 2","termid":"PBO:0046365"}


id: PBO:0067869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 171","termid":"PBO:0067869"}


id: PBO:0090076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1-like","termid":"PBO:0090076"}


id: PBO:0034418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_indirect_input_(obsolete_has_indirect_input)","termid":"PBO:0034418"}


id: PATO:0005008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by low-crowned teeth. Human teeth are brachydont.","definition_xrefs":["DOI:10.1111/j.1469-185X.2011.00176.x"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydont","termid":"PATO:0005008"}


id: FYPO:0005267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to aluminium ions. Cells stop growing (and may die) at a concentration of aluminium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to aluminium","synonyms":[{"name":"hypersensitive to aluminium","type":"exact"},{"name":"sensitive to aluminium during mitotic cell cycle","type":"related"},{"name":"sensitive to aluminium during vegetative growth","type":"exact"},{"name":"sensitive to aluminium ions","type":"exact"},{"name":"sensitive to aluminum","type":"exact"}],"termid":"FYPO:0005267"}


id: PR:Q09929
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transferase CAF17, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferase caf17, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.07","secondary_identifiers":["UniProtKB:Q09929"],"synonyms":[{"name":"Spom972h-IBA57","type":"exact"}],"termid":"PR:Q09929"}


id: PR:Q92376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkl1 gene.","definition_xrefs":["UniProtKB:Q92376","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.14c","synonyms":[{"name":"Spom972h-pkl1","type":"exact"}],"termid":"PR:Q92376"}


id: PBO:0003983
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shk1 Kinase Binding protein","termid":"PBO:0003983"}


id: GO:0018216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group to an arginine residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"peptidyl-arginine modification","termid":"GO:0018195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine methylation","secondary_identifiers":["GO:0018017"],"termid":"GO:0018216"}


id: PBO:0080336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 100 pseudogene","termid":"PBO:0080336"}


id: GO:0031116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microtubule polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of microtubule polymerization or depolymerization","termid":"GO:0031112"},{"relation_name":"is_a","term_name":"regulation of microtubule polymerization","termid":"GO:0031113"},{"relation_name":"is_a","term_name":"positive regulation of protein polymerization","termid":"GO:0032273"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"microtubule polymerization","termid":"GO:0046785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0007010","GO:0044085","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"positive regulation of microtubule polymerization","synonyms":[{"name":"activation of microtubule polymerization","type":"narrow"},{"name":"stimulation of microtubule polymerization","type":"narrow"},{"name":"up regulation of microtubule polymerization","type":"exact"},{"name":"up-regulation of microtubule polymerization","type":"exact"},{"name":"upregulation of microtubule polymerization","type":"exact"}],"termid":"GO:0031116"}


id: PBO:0083194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene GAS1/YMR307W","termid":"PBO:0083194"}


id: PBO:0076104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 8 pseudogene 1","termid":"PBO:0076104"}


id: PBO:0049475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme M","termid":"PBO:0049475"}


id: PBO:0003294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase non catalytic Sm-like domain subunit Naa38 (predicted)","termid":"PBO:0003294"}


id: MONDO:0023659
data:
  {"annotated_genes":["SJAG_00330"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88349],"is_not":false,"summary":null,"term":"MONDO:0023659"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 96","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543446","DOID:0070377","OMIM:619340","GARD:16445","MEDGEN:1780167"],"synonyms":[{"name":"DEE96","type":"exact"}],"termid":"MONDO:0023659","terms_by_termid":{"MONDO:0023659":null},"xrefs":{"Monarch":{"xref_id":"0023659"}}}


id: RO:0002256
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"t1 induced_by t2 if there is a process of developmental induction (GO:0031128) with t1 and t2 as interacting participants. t2 causes t1 to change its fate from a precursor anatomical structure type T to T', where T' develops_from T","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_induced_by","termid":"RO:0002256"}


id: GO:0042068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pteridine metabolic process","synonyms":[{"name":"regulation of pteridine metabolism","type":"exact"}],"termid":"GO:0042068"}


id: PBO:0084509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic regulator; involved in maintaining sister chromatid cohesion during meiosis I as well as promoting proper attachment of kinetochores to the spindle during meiosis I and meiosis II; anaphase-promoting complex (APC) substrate that is degraded during anaphase I; expressed only in meiotic cells","termid":"PBO:0084509"}


id: GO:0047079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyuridine + 2-oxoglutarate + O2 = 2-deoxy-D-ribono-1,4-lactone + CO2 + succinate + uracil.","definition_xrefs":["EC:1.14.11.10","RHEA:23316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"deoxyuridine 1'-dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.11.10-RXN","KEGG_REACTION:R02486"],"synonyms":[{"name":"2'-deoxyuridine,2-oxoglutarate:oxygen oxidoreductase (1'-hydroxylating)","type":"related"},{"name":"pyrimidine-deoxynucleoside 1'-dioxygenase activity","type":"broad"},{"name":"pyrimidine-deoxynucleoside,2-oxoglutarate 1'-dioxygenase activity","type":"broad"}],"termid":"GO:0047079"}


id: GO:0106115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cohesin dsDNA (leading strand) loading.","definition_xrefs":["PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitotic cohesin dsDNA (leading strand) loading (obsolete GO:0106115)","termid":"GO:0106115"}


id: GO:1904630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diterpene stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:19765580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to diterpene","termid":"GO:1904629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diterpene","termid":"GO:1904630"}


id: PBO:0052182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 15","termid":"PBO:0052182"}


id: MONDO:0006784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized as a coagulation disturbance in newborns due to vitamin K deficiency resulting in impaired production of coagulation factors II, VII, IX, and X, and proteins C and S by the liver.","definition_xrefs":["NCIT:C111857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"},{"relation_name":"is_a","term_name":"nutritional disorder","termid":"MONDO:0005137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemorrhagic disease of newborn","secondary_identifiers":["MedDRA:10019601","UMLS:C0019088","MEDGEN:42406","EFO:1000964","MESH:D006475","ICD10CM:P53","ICD9:776.0","SCTID:12546009"],"synonyms":[{"name":"hemorrhagic disease of newborn","type":"exact"},{"name":"vitamin K deficiency bleeding in newborn","type":"exact"}],"termid":"MONDO:0006784","xrefs":{"Monarch":{"xref_id":"0006784"}}}


id: PBO:0088245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial (2Fe-2S) cluster assembly co-chaperone Jac1","termid":"PBO:0088245"}


id: PBO:0051411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-47","termid":"PBO:0051411"}


id: PBO:0061761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase like","termid":"PBO:0061761"}


id: MONDO:0011673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 15q25-q26.","definition_xrefs":["DOID:0110560","PMID:11571554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 30","secondary_identifiers":["GARD:18114","MEDGEN:341116","MESH:C564706","OMIM:606451","UMLS:C1847972"],"synonyms":[{"name":"DFNA30","type":"narrow"},{"name":"autosomal dominant deafness 30","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 30","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 30","type":"narrow"},{"name":"deafness, autosomal dominant 30","type":"narrow"}],"termid":"MONDO:0011673","xrefs":{"Monarch":{"xref_id":"0011673"}}}


id: GO:1905014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 'de novo' NAD biosynthetic process from L-tryptophan.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of L-tryptophan metabolic process","termid":"GO:0090358"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide biosynthetic process","termid":"GO:1900373"},{"relation_name":"is_a","term_name":"positive regulation of NAD metabolic process","termid":"GO:1902690"},{"relation_name":"is_a","term_name":"regulation of 'de novo' NAD biosynthetic process from L-tryptophan","termid":"GO:1905012"},{"relation_name":"positively_regulates","term_name":"'de novo' NAD+ biosynthetic process from L-tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of 'de novo' NAD biosynthetic process from L-tryptophan","synonyms":[{"name":"activation of 'de novo' NAD biosynthetic process from tryptophan","type":"narrow"},{"name":"activation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"positive regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"broad"},{"name":"positive regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"up regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"up regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"up-regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"up-regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"upregulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"upregulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905014"}


id: FYPO:0001555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the intermediate RNAs formed during tRNA processing differ from wild type in size.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"formation of abnormal tRNA processing intermediates","synonyms":[{"name":"abnormal tRNA maturation intermediates","type":"exact"},{"name":"formation of abnormal tRNA processing intermediates during mitotic cell cycle","type":"related"},{"name":"formation of abnormal tRNA processing intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0001555"}


id: PBO:0043094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 6","termid":"PBO:0043094"}


id: GO:0120095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle membrane contact site formed at the junction of the vacuolar membrane and the isolation membrane or phagophore in response to starvation or other stresses, leading to the formation of the autophagosome.","definition_xrefs":["PMID:23549786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vacuole-isolation membrane contact site","synonyms":[{"name":"VICS","type":"related"},{"name":"vacuole-IM contact site","type":"exact"},{"name":"vacuole-phagophore contact site","type":"exact"}],"termid":"GO:0120095"}


id: MONDO:1012931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary chondrodysplasia that occurs in cattle due to a mutation in the EVC2 gene.","definition_xrefs":["PMID:24733244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia, EVC2-related, cattle","secondary_identifiers":["OMIA:002540-9913"],"synonyms":[{"name":"Ellis-van Creveld Syndrome, cattle","type":"related"},{"name":"bovine chondrodysplastic dwarfism","type":"related"}],"termid":"MONDO:1012931","xrefs":{"Monarch":{"xref_id":"1012931"}}}


id: PBO:0047064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 124 member A","termid":"PBO:0047064"}


id: GO:0036383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione + FMNH2 + O2 = 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione + FMN + H2O.","definition_xrefs":["EC:1.14.14.12","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R09819","RHEA:31731","MetaCyc:RXN-12717"],"termid":"GO:0036383"}


id: PBO:0038793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase like","termid":"PBO:0038793"}


id: PBO:0053346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 229","termid":"PBO:0053346"}


id: MONDO:0005300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Impairment of the renal function secondary to chronic kidney damage persisting for three or more months.","definition_xrefs":["NCIT:C80078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"chronic kidney disease","secondary_identifiers":["MESH:D007676","DOID:784","NANDO:2100008","icd11.foundation:412389819","ICD10CM:N18.9","ICD9:585.6","EFO:0003884","NANDO:2100023","SCTID:709044004","UMLS:C1561643","ICD9:585","MEDGEN:473458"],"synonyms":[{"name":"CKD","type":"exact"},{"name":"CKD - chronic kidney disease","type":"exact"},{"name":"chronic kidney disease","type":"exact"},{"name":"chronic renal disease","type":"exact"},{"name":"chronic renal failure syndrome","type":"narrow"},{"name":"chronic renal insufficiency","type":"related"},{"name":"kidney disease, chronic","type":"exact"},{"name":"renal failure - chronic","type":"exact"}],"termid":"MONDO:0005300","xrefs":{"Monarch":{"xref_id":"0005300"}}}


id: PBO:0069818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1104, pseudogene","termid":"PBO:0069818"}


id: PBO:0081272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 37A","termid":"PBO:0081272"}


id: PBO:0043589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XIX alpha 1 chain","termid":"PBO:0043589"}


id: SO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Terminal inverted repeat transposons in the PIF/Harbinger/tourist superfamily create 3-bp target site duplication that are mainly 'TAA' or 'TTA'. The autonomous PIF-Harbinger elements are relatively small in size, usually a few kb in length. Non-autonomous elements in this superfamily usually shorter than 600 bp are referrred to as Tourist elements. The terminal sequences for PIF/Harbinger/Tourist elements are 'GGG/CCC…GGC/GCC' or 'GA/GGCA…TGCC/TC'.","definition_xrefs":["PMID:26709091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIF_Harbinger_TIR_transposon","synonyms":[{"name":"DTH transposon","type":"exact"},{"name":"Harbinger transposon","type":"exact"},{"name":"PIF Harbinger TIR transposon","type":"exact"},{"name":"PIF transposon","type":"exact"},{"name":"Tourist transposon element","type":"exact"}],"termid":"SO:0002284"}


id: MOD:00303
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts seven L-histidinine residues and a four-copper one-sulfur one-hydroxide cluster to heptakis-L-histidino tetracopper mu4-sulfide hydroxide.","definition_xrefs":["PubMed:11024061","PubMed:11041839","RESID:AA0298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heptakis-L-histidino tetracopper mu4-sulfide hydroxide","synonyms":[{"name":"heptakis-L-histidino tetracopper mu4-sulfide hydroxide","type":"exact"},{"name":"mu4-sulfido bis(bis-N1'-histidino copper)(N1'-histidino-N3'-histidino copper)(N3'-histidino hydroxide copper)","type":"exact"},{"name":"nitrous oxide reductase nosZ CuZ cluster","type":"exact"},{"name":"pentakis-L-N1'-histidino-bis-L-N3'-histidino tetracopper sulfide hydroxide","type":"exact"}],"termid":"MOD:00303"}


id: MONDO:0700061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characteristic in which the cause of the disease is present in some of the cells of the organism, or in all the cells of the organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic vs complete","termid":"MONDO:0700061","xrefs":{"Monarch":{"xref_id":"0700061"}}}


id: FYPO:0003410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a larger portion of the centromeric region of the chromosome than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["GO:0034080","PomBase:mah","PMID:24710126","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"increased spatial extent of CENP-A containing chromatin assembly","synonyms":[{"name":"CENP-A containing nucleosome spreading","type":"related"},{"name":"increased extent of CENP-A containing nucleosome","type":"related"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly","type":"related"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"increased spatial extent of CENP-A deposition","type":"related"},{"name":"increased spatial extent of CENP-A loading","type":"related"},{"name":"increased spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"increased spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"increased spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"increased spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"increased spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0003410"}


id: FYPO:0004569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the meiotic spindle is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal spindle","termid":"FYPO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spindle during meiosis I","synonyms":[{"name":"normal meiosis I spindle","type":"exact"},{"name":"normal meiotic spindle during meiosis I","type":"exact"},{"name":"normal spindle during first meiotic nuclear division","type":"related"}],"termid":"FYPO:0004569"}


id: GO:0030939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a photoperiod, an intermittent cycle of light (day) and dark (night) photoperiod regimes, with the light phase being longer than the dark.","definition_xrefs":["GOC:pj"],"gene_count":0,"genotype_count":0,"name":"obsolete response to long-day photoperiod (obsolete GO:0030939)","synonyms":[{"name":"response to long-day photoperiod","type":"exact"}],"termid":"GO:0030939"}


id: GO:0046508
data:
  {"annotated_genes":["SJAG_03556"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004013"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any carbon-sulfur bond, C-S.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-sulfur bonds","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.13.-.-"],"synonyms":[{"name":"hydrolase activity, acting on carbon-sulphur bonds","type":"exact"}],"termid":"GO:0046508","terms_by_termid":{"GO:0004013":null}}


id: MOD:00672
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with an acylsulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-acylated residue","synonyms":[{"name":"SAcylRes","type":"exact"}],"termid":"MOD:00672"}


id: PBO:0016904
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 RNA is transcribed with a 3' extension that is removed by post-transcriptional RNA processing","termid":"PBO:0016904"}


id: MONDO:0009990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Revesz syndrome is a rare severe phenotypic variant of dyskeratosis congenita (DC) with an onset in early childhood, characterized by features of DC (e.g. skin hyper/hypopigmentation, nail dystrophy, oral leukoplakia, high risk of bone marrow failure (BMF) and cancer, developmental delay sparse and fine hair) in conjunction with bilateral exudative retinopathy, and intracranial calcifications.","definition_xrefs":["Orphanet:3088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"Revesz syndrome","secondary_identifiers":["MEDGEN:231230","DOID:0070026","MESH:C538371","GARD:4695","SCTID:723512008","OMIM:268130","NCIT:C152064","UMLS:C1327916"],"synonyms":[{"name":"DKCA5","type":"exact"},{"name":"Revesz syndrome","type":"exact"},{"name":"Revesz-DeBuse syndrome","type":"exact"},{"name":"dyskeratosis congenita with bilateral exudative retinopathy","type":"exact"},{"name":"dyskeratosis congenita, autosomal dominant 5","type":"exact"},{"name":"exudative retinopathy with bone marrow failure","type":"exact"},{"name":"retinopathy-anemia-central nervous system anomalies syndrome","type":"exact"}],"termid":"MONDO:0009990","xrefs":{"Monarch":{"xref_id":"0009990"}}}


id: GO:1904914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of the localization of a protein-containing macromolecular complex to a telomere.","definition_xrefs":["GOC:BHF_telomere","GOC:BHF","GO_REF:0000058","GOC:rph","GOC:TermGenie","PMID:26586433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of establishment of protein-containing complex localization to telomere","termid":"GO:1904913"},{"relation_name":"negatively_regulates","term_name":"establishment of protein-containing complex localization to telomere","termid":"GO:0097695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of protein-containing complex localization to telomere","synonyms":[{"name":"down regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"down regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"down-regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"down-regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"downregulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"downregulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"inhibition of establishment of macromolecular complex localisation to telomere","type":"narrow"},{"name":"inhibition of establishment of macromolecular complex localization to telomere","type":"narrow"},{"name":"negative regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"negative regulation of establishment of macromolecular complex localization to telomere","type":"related"}],"termid":"GO:1904914"}


id: PBO:0004444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRDE-2 family protein (predicted)","termid":"PBO:0004444"}


id: PBO:0050377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 1","termid":"PBO:0050377"}


id: GO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a gamma-delta T cell population by cell division as part of an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"},{"relation_name":"is_a","term_name":"T cell proliferation involved in immune response","termid":"GO:0002309"},{"relation_name":"is_a","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell proliferation involved in immune response","synonyms":[{"name":"gamma-delta T cell proliferation during immune response","type":"related"},{"name":"gamma-delta T lymphocyte proliferation during immune response","type":"related"},{"name":"gamma-delta T-cell proliferation during immune response","type":"related"},{"name":"gamma-delta T-lymphocyte proliferation during immune response","type":"related"}],"termid":"GO:0002311"}


id: PBO:0029849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_riboflavin_binding","termid":"PBO:0029849"}


id: PBO:0090650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX2 complex subunit-like (poorly characterized, implicated in transcription or splicing)","termid":"PBO:0090650"}


id: PBO:0026892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_vegetative_growth","termid":"PBO:0026892"}


id: PBO:0070690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 61","termid":"PBO:0070690"}


id: GO:0019630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving quinate, the anion of quinic acid. The acid occurs commonly in plants, either free or as esters, and is used as a medicine.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"quinate metabolic process","synonyms":[{"name":"quinate metabolism","type":"exact"},{"name":"quinic acid metabolic process","type":"exact"},{"name":"quinic acid metabolism","type":"exact"}],"termid":"GO:0019630"}


id: PBO:0045326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 5","termid":"PBO:0045326"}


id: GO:0034297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which oidia, a type of asexual spore found in fungi, are formed. Oidia are borne a few at a time on very simple hyphae that protrude a short distance into the substrate, and are usually presumed not to constitute the main reproductive strategy of the fungus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oidium formation","termid":"GO:0034297"}


id: PBO:0002128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein phosphatase (predicted)","termid":"PBO:0002128"}


id: GO:1903605
data:
  {"annotated_genes":["SJAG_04008","SJAG_03199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109413,96288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903607"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a cytochrome.","definition_xrefs":["PMID:19721088","GOC:dph","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"cytochrome metabolic process","termid":"GO:1903604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytochrome biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome anabolism","type":"exact"},{"name":"cytochrome biosynthesis","type":"exact"},{"name":"cytochrome formation","type":"exact"},{"name":"cytochrome synthesis","type":"exact"}],"termid":"GO:1903605","terms_by_termid":{"GO:1903607":null}}


id: MONDO:0010691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare X-linked genetic vitreoretinal condition characterized by abnormal retinal development with congenital blindness. Common associated manifestations include sensorineural hearing loss and developmental delay, intellectual disability and/or behavioral disorders.","definition_xrefs":["Orphanet:649"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Norrie disease","secondary_identifiers":["MEDGEN:75615","NCIT:C118634","SCTID:15228007","OMIM:310600","DOID:0060844","icd11.foundation:676214590","UMLS:C0266526","MESH:C537849","MedDRA:10069760","ICD9:743.8","GARD:7224","ICD10CM:H35.5"],"synonyms":[{"name":"Anderson-Warburg syndrome","type":"related"},{"name":"Episkopi blindness","type":"exact"},{"name":"ND","type":"related"},{"name":"NDP","type":"related"},{"name":"Norrie disease","type":"exact"},{"name":"Norrie disease, X-linked recessive","type":"exact"},{"name":"Norrie syndrome","type":"related"},{"name":"Norrie-Warburg disease","type":"exact"},{"name":"Norrie-Warburg syndrome","type":"related"},{"name":"atrophia bulborum hereditaria","type":"exact"},{"name":"fetal iritis syndrome","type":"related"},{"name":"foetal iritis syndrome","type":"related"},{"name":"nd","type":"related"},{"name":"pseudoglioma","type":"related"}],"termid":"MONDO:0010691","xrefs":{"Monarch":{"xref_id":"0010691"}}}


id: PBO:0073094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit C pseudogene 3","termid":"PBO:0073094"}


id: PBO:0057419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548u","termid":"PBO:0057419"}


id: MONDO:0009373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Seizures-intellectual disability due to hydroxylysinuria syndrome is characterized by hydroxylysinuria, myoclonic and motor seizures and intellectual deficit. It has been described in a brother and sister born to consanguineous parents and in one unrelated patient.","definition_xrefs":["Orphanet:79156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysine and hydroxylysine metabolism","termid":"MONDO:0017351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"seizures-intellectual disability due to hydroxylysinuria syndrome","secondary_identifiers":["GARD:16709","MEDGEN:343450","MESH:C565502","OMIM:236900","UMLS:C1855986"],"synonyms":[{"name":"hydroxylysinuria","type":"related"}],"termid":"MONDO:0009373","xrefs":{"Monarch":{"xref_id":"0009373"}}}


id: PBO:0028829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_localization","termid":"PBO:0028829"}


id: MONDO:0859244
data:
  {"annotated_genes":["SJAG_02364","SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88779,88780],"is_not":false,"summary":null,"term":"MONDO:0859244"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_02364":null},"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1291561","MEDGEN:713858","OMIM:619859"],"termid":"MONDO:0859244","terms_by_termid":{"MONDO:0859244":null},"xrefs":{"Monarch":{"xref_id":"0859244"}}}


id: PBO:0075388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP2 divergent transcript","termid":"PBO:0075388"}


id: PBO:0055475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2908","termid":"PBO:0055475"}


id: MONDO:0010866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by osteopetrosis, agenesis of the corpus callosum, cerebral atrophy and a small hippocampus.","definition_xrefs":["Orphanet:85179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile osteopetrosis with neuroaxonal dysplasia","secondary_identifiers":["SCTID:724226009","UMLS:C1838258","MEDGEN:373924","MESH:C536055","icd11.foundation:1434293148","GARD:10082","OMIM:600329","DOID:0070343"],"synonyms":[{"name":"osteopetrosis and infantile neuroaxonal dystrophy","type":"related"}],"termid":"MONDO:0010866","xrefs":{"Monarch":{"xref_id":"0010866"}}}


id: PBO:0091469
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli mutY","termid":"PBO:0091469"}


id: GO:0008842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: diphosphate + a purine nucleoside = monophosphate + a purine mononucleotide.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete diphosphate-purine nucleoside kinase activity (obsolete GO:0008842)","termid":"GO:0008842"}


id: PBO:0084223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP70 family ATP-binding protein; involved in protein folding, vacuolar import of proteins; required for ubiquitin-dependent degradation of short-lived proteins; associated with chaperonin-containing T-complex; 98% identical to paralog Ssa1p with distinct functional specificity in propagation of yeast [URE3] prions and vacuolar-mediated degradation of gluconeogenesis enzymes; binds tRNA, has role in tRNA nuclear import during starvation","termid":"PBO:0084223"}


id: PBO:0027598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_division_site","termid":"PBO:0027598"}


id: GO:0070720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the receptor adaptor proteins Grb2 and SHP-2, and is involved signaling via the PDGFR signaling pathway.","definition_xrefs":["PMID:8943348","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Grb2-SHP-2 complex","synonyms":[{"name":"GRB2-SHP-2 complex, PDGF stimulated","type":"narrow"}],"termid":"GO:0070720"}


id: MONDO:0014740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the HOMER2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 68","secondary_identifiers":["DOID:0110589","MEDGEN:898808","GARD:18144","UMLS:C4225240","OMIM:616707"],"synonyms":[{"name":"DFNA68","type":"narrow"},{"name":"HOMER2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 68","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 68","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in HOMER2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 68","type":"narrow"},{"name":"deafness, autosomal dominant 68","type":"narrow"},{"name":"deafness, autosomal dominant type 68","type":"narrow"}],"termid":"MONDO:0014740","xrefs":{"Monarch":{"xref_id":"0014740"}}}


id: PBO:0057341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 526a-2","termid":"PBO:0057341"}


id: PBO:0087414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (60 kDa) of TFIID and SAGA complexes; involved in transcription initiation of RNA polymerase II and in chromatin modification, similar to histone H4; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087414"}


id: GO:0038149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 2 (CCL2) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-C motif chemokine 2 receptor activity","synonyms":[{"name":"CCL2 receptor activity","type":"exact"}],"termid":"GO:0038149"}


id: MONDO:0032882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heyn-Sproul-Jackson syndrome","secondary_identifiers":["MEDGEN:1684743","UMLS:C5231475","OMIM:618724","Orphanet:658595"],"synonyms":[{"name":"HESJAS","type":"related"},{"name":"HEYN-SPROUL-JACKSON SYNDROME","type":"related"},{"name":"Microcephaly, Short Stature, and Impaired Intellectual Development","type":"related"}],"termid":"MONDO:0032882","xrefs":{"Monarch":{"xref_id":"0032882"}}}


id: MONDO:0003612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the uterine ligament.","definition_xrefs":["NCIT:C126498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system cancer","termid":"MONDO:0000637"},{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"uterine ligament neoplasm","termid":"MONDO:0021629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament cancer","secondary_identifiers":["UMLS:C0864950","DOID:5727","MEDGEN:923070"],"synonyms":[{"name":"cancer of uterine ligament","type":"exact"},{"name":"malignant neoplasm of uterine ligament","type":"exact"},{"name":"malignant uterine ligament neoplasm","type":"exact"},{"name":"tumour of the uterine ligament","type":"related"},{"name":"uterine ligament cancer","type":"exact"}],"termid":"MONDO:0003612","xrefs":{"Monarch":{"xref_id":"0003612"}}}


id: PATO:0000324
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with medium wavelength of that portion of the visible spectrum lying between orange and green, evoked in the human observer by radiant energy with wavelengths of approximately 570 to 590 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow","termid":"PATO:0000324"}


id: GO:0000456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Dimethylation of the N6 amino groups of two consecutive adenosine residues near the 3'-end of the SSU rRNA. This process has been conserved from bacteria to eukaryotes.","definition_xrefs":["ISBN:1555811337","GOC:dph","GOC:curators","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylation involved in SSU-rRNA maturation (obsolete GO:0000456)","termid":"GO:0000456"}


id: PBO:0043121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine induced apoptosis inhibitor 1 pseudogene","termid":"PBO:0043121"}


id: GO:0045751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Tl signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Toll signaling pathway","termid":"GO:0008592"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"Toll signaling pathway","termid":"GO:0008063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Toll signaling pathway","synonyms":[{"name":"down regulation of Toll signaling pathway","type":"exact"},{"name":"down-regulation of Toll signaling pathway","type":"exact"},{"name":"downregulation of Toll signaling pathway","type":"exact"},{"name":"inhibition of Toll signaling pathway","type":"narrow"},{"name":"negative regulation of Tl signaling pathway","type":"exact"},{"name":"negative regulation of Tl signalling pathway","type":"exact"}],"termid":"GO:0045751"}


id: FYECO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited zinc","synonyms":[{"name":"limited Zn added","type":"exact"}],"termid":"FYECO:0000177"}


id: MOD:01802
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serinium (protonated L-serine) residue to an N,N,N-trimethyl-L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-serine (L-serinium) residue","termid":"MOD:01801"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated residue","termid":"MOD:01687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-serine (from L-serinium)","synonyms":[{"name":"N2Me3Ala","type":"exact"}],"termid":"MOD:01802"}


id: MONDO:0017616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Schutz type","secondary_identifiers":["Orphanet:3062"],"termid":"MONDO:0017616","xrefs":{"Monarch":{"xref_id":"0017616"}}}


id: PBO:0026918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_rRNA_modification","termid":"PBO:0026918"}


id: PBO:0012821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-local_range","termid":"PBO:0012821"}


id: PBO:0027168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation","termid":"PBO:0027168"}


id: MONDO:0957815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with or without epilepsy","secondary_identifiers":["OMIM:620540","UMLS:C5882702","MEDGEN:1848555"],"termid":"MONDO:0957815","xrefs":{"Monarch":{"xref_id":"0957815"}}}


id: PBO:0027388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_salt_stress","termid":"PBO:0027388"}


id: RO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a specifically dependent continuant (the dependent), in which the dependent specifically depends on the bearer for its existence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bearer_of","termid":"RO:0000053"}


id: PBO:0027547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_non-fermentable_carbon_source","termid":"PBO:0027547"}


id: PBO:0070219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 152 pseudogene","termid":"PBO:0070219"}


id: PR:O59835
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase delta subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14303:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.02c","secondary_identifiers":["UniProtKB:O59835"],"synonyms":[{"name":"SPBC12D12.02c","type":"related"},{"name":"Spom972h-POLD4","type":"exact"}],"termid":"PR:O59835"}


id: GO:0075266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of oogonium development, a process that leads to the formation of a female gametangium of oomycetes, containing one or more gametes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of oogonium development","termid":"GO:0075264"},{"relation_name":"negatively_regulates","term_name":"oogonium development","termid":"GO:0075263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oogonium development","termid":"GO:0075266"}


id: GO:0032981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form mitochondrial respiratory chain complex I.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase complex assembly","termid":"GO:0010257"},{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex I assembly","secondary_identifiers":["Reactome:R-HSA-6799198"],"synonyms":[{"name":"mitochondrial NADH dehydrogenase complex (ubiquinone) assembly","type":"exact"},{"name":"mitochondrial complex I assembly","type":"exact"}],"termid":"GO:0032981"}


id: MONDO:0018102
data:
  {"annotated_genes":["SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007376"}]},"cv_name":"mondo","definition":"The term corneal dystrophy embraces a heterogeneous group of bilateral genetically determined non-inflammatory corneal diseases that are usually restricted to the cornea. The designation is imprecise but remains in vogue because of its clinical value.","definition_xrefs":["Orphanet:34533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0001131","icd11.foundation:1291475891","MedDRA:10011005","MEDGEN:3619","UMLS:C0010036","ICD9:371.50","ICD9:371.5","NCIT:C34513","DOID:2566","MESH:D003317","SCTID:5587004"],"synonyms":[{"name":"corneal dystrophy","type":"exact"},{"name":"corneal dystrophy (disease)","type":"exact"}],"termid":"MONDO:0018102","terms_by_termid":{"MONDO:0007376":null},"xrefs":{"Monarch":{"xref_id":"0018102"}}}


id: PBO:0089570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA NAD-cap (NAD-forming) hydrolase/RNA pyrophosphohydrolase Din1","termid":"PBO:0089570"}


id: GO:1901411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole biosynthetic process from glutamate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glutamate","termid":"GO:1901410"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"is_a","term_name":"negative regulation of glutamate metabolic process","termid":"GO:2000212"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole biosynthetic process from glutamate","termid":"GO:0033526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0033013","GO:0044281"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"down regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthetic process from glutamate","type":"narrow"},{"name":"inhibition of tetrapyrrole formation from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:1901411"}


id: PR:O94355
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rxt2 gene.","definition_xrefs":["UniProtKB:O94355","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein rxt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.06c","synonyms":[{"name":"Spom972h-rxt2","type":"exact"}],"termid":"PR:O94355"}


id: PBO:0079799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B10","termid":"PBO:0079799"}


id: MONDO:0016597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete generalized pustular psoriasis (obsolete MONDO:0016597)","secondary_identifiers":["NANDO:1200240"],"termid":"MONDO:0016597","xrefs":{"Monarch":{"xref_id":"0016597"}}}


id: GO:0106377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-ATP + H2O = 2-hydroxy-AMP + H+ + diphosphate.","definition_xrefs":["RHEA:67392","PMID:11139615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0047429","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-ATP hydrolase activity","secondary_identifiers":["Reactome:R-HSA-2395872"],"termid":"GO:0106377"}


id: PBO:0091770
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"The Bioneer strain does not appear contain a deletion","termid":"PBO:0091770"}


id: MONDO:0014538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital fibrosis of extraocular muscles in which the cause of the disease is a mutation in the COL25A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"fibrosis of extraocular muscles, congenital, 5","secondary_identifiers":["GARD:18164","OMIM:616219","UMLS:C4015552","DOID:0081020","MEDGEN:863989"],"synonyms":[{"name":"CFEOM5","type":"related"},{"name":"COL25A1 congenital fibrosis of extraocular muscles","type":"exact"},{"name":"congenital fibrosis of extraocular muscles caused by mutation in COL25A1","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 5","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, type 5","type":"exact"}],"termid":"MONDO:0014538","xrefs":{"Monarch":{"xref_id":"0014538"}}}


id: PBO:0005581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase pseudogene","termid":"PBO:0005581"}


id: PBO:0080141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasorin","termid":"PBO:0080141"}


id: PBO:0065328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 52, pseudogene","termid":"PBO:0065328"}


id: GO:0039710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an icosahedral viral capsid in the cytoplasm. Often occurs by assembling around the viral genome.","definition_xrefs":["VZ:1950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic capsid assembly","termid":"GO:0039709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic icosahedral capsid assembly","termid":"GO:0039710"}


id: PBO:0065249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20B","termid":"PBO:0065249"}


id: GO:0062245
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double membrane vesicle viral factory membrane","termid":"GO:0062242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory inner membrane","synonyms":[{"name":"inner membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062245"}


id: MONDO:0007191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, relapsing, multisystemic vasculitis characterized by mucocutaneous lesions, as well as articular, vascular, ocular and central nervous system manifestations.","definition_xrefs":["Orphanet:117"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete predominantly large-vessel vasculitis (obsolete MONDO:0015488)","termid":"MONDO:0015488"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and autoimmune disease with epilepsy (obsolete MONDO:0015657)","termid":"MONDO:0015657"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic diseases with anterior uveitis (obsolete MONDO:0017259)","termid":"MONDO:0017259"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic diseases with posterior uveitis (obsolete MONDO:0017260)","termid":"MONDO:0017260"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic diseases with panuveitis (obsolete MONDO:0017261)","termid":"MONDO:0017261"},{"relation_name":"excluded_subClassOf","term_name":"obsolete autoinflammatory syndrome with skin involvement (obsolete MONDO:0017370)","termid":"MONDO:0017370"},{"relation_name":"excluded_subClassOf","term_name":"obsolete unclassified autoinflammatory syndrome (obsolete MONDO:0017957)","termid":"MONDO:0017957"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Behcet disease","secondary_identifiers":["EFO:0003780","MEDGEN:2568","NANDO:1200284","DOID:13241","GARD:848","MedDRA:10004213","OMIM:109650","icd11.foundation:1668927157","ICD9:136.1","SCTID:310701003","UMLS:C0004943","MESH:D001528","NANDO:2200422","NCIT:C34416"],"synonyms":[{"name":"Adamantiades-Behcet disease","type":"exact"},{"name":"BD","type":"related"},{"name":"Bechet syndrome","type":"exact"},{"name":"Behcet disease","type":"exact"},{"name":"Behcet syndrome","type":"exact"},{"name":"Behcet's disease","type":"related"},{"name":"Behcet's syndrome","type":"exact"},{"name":"Behet's syndrome","type":"exact"},{"name":"Behçet disease","type":"exact"},{"name":"Behçet syndrome","type":"exact"},{"name":"Behçet's disease","type":"related"},{"name":"Behçet's syndrome","type":"exact"},{"name":"Behçet-Adamantiades syndrome","type":"exact"},{"name":"Behçet’s disease","type":"related"},{"name":"Morbus Behçet's syndrome","type":"exact"},{"name":"silk road disease","type":"exact"},{"name":"triple symptom complex","type":"exact"}],"termid":"MONDO:0007191","xrefs":{"Monarch":{"xref_id":"0007191"}}}


id: GO:0047465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-D-glucosamine 6-phosphate = an N-acyl-D-mannosamine 6-phosphate.","definition_xrefs":["RHEA:23932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acylglucosamine-6-phosphate 2-epimerase activity","secondary_identifiers":["EC:5.1.3.9","MetaCyc:5.1.3.9-RXN"],"synonyms":[{"name":"N-acetylglucosmamine 6-phosphate 2-epimerase activity","type":"related"},{"name":"N-acetylmannosamine-6-phosphate 2-epimerase activity","type":"related"},{"name":"N-acyl-D-glucosamine-6-phosphate 2-epimerase activity","type":"related"},{"name":"acylglucosamine phosphate 2-epimerase activity","type":"related"},{"name":"acylglucosamine-6-phosphate 2-epimerase activity","type":"related"},{"name":"acylmannosamine phosphate 2-epimerase activity","type":"related"}],"termid":"GO:0047465"}


id: PBO:0090194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein, implicated in trancriptional response to stress","termid":"PBO:0090194"}


id: FYPO:0005406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of DNA recombination is increased in telomeric regions in haploid cells that have undergone meiosis, sporulation and spore germination.","definition_xrefs":["PMID:12930956","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"increased DNA recombination at telomere following meiotic cell cycle","synonyms":[{"name":"increased DNA recombination at telomere during meiotic cell cycle","type":"related"},{"name":"increased DNA recombination frequency at telomere following meiotic cell cycle","type":"related"},{"name":"increased DNA recombination rate at telomere following meiotic cell cycle","type":"related"},{"name":"increased recombination at telomere following meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005406"}


id: PBO:0081047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 3","termid":"PBO:0081047"}


id: MONDO:0001670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Resorption of calcified dental tissue, involving demineralization due to reversal of the cation exchange and lacunar resorption by osteoclasts. There are two types: external (as a result of tooth pathology) and internal (apparently initiated by a peculiar inflammatory hyperplasia of the pulp). (From Jablonski, Dictionary of Dentistry, 1992, p676)","definition_xrefs":["MESH:D014091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth resorption","secondary_identifiers":["SCTID:70931000","UMLS:C0040451","DOID:13240","ICD9:521.4","MEDGEN:21587"],"termid":"MONDO:0001670","xrefs":{"Monarch":{"xref_id":"0001670"}}}


id: FYPO:0004922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus, has no septum, is elongated, and progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated mononucleate aseptate cell","termid":"FYPO:0000839"},{"relation_name":"is_a","term_name":"inviable mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0005367"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0007701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000004","FYPO:0000032"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell arrested at G2/M","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic G2/M phase transition arrest","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic G2-phase arrested elongated inviable mononucleate aseptate vegetative cell","type":"related"},{"name":"mitotic cell cycle arrest in G2-phase with elongated inviable mononucleate aseptate cell","type":"related"}],"termid":"FYPO:0004922"}


id: PBO:0028230
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level_during_cellular_response_to_oxidative_stress","termid":"PBO:0028230"}


id: GO:0038062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with collagen and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["PMID:16626936","GOC:bf","PMID:21568710","GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"},{"relation_name":"is_a","term_name":"collagen receptor activity","termid":"GO:0038064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0004672","GO:0038023","GO:0140096","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"protein tyrosine kinase collagen receptor activity","synonyms":[{"name":"collagen RTK activity","type":"exact"},{"name":"discoidin domain receptor","type":"related"}],"termid":"GO:0038062"}


id: MONDO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of gonococcal salpingitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic salpingitis","termid":"MONDO:0003617"},{"relation_name":"is_a","term_name":"gonococcal salpingitis","termid":"MONDO:0021159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic gonococcal salpingitis","secondary_identifiers":["SCTID:53529004","UMLS:C0153208","icd11.foundation:1233448408","DOID:12718","MEDGEN:509205","ICD9:098.37"],"synonyms":[{"name":"gonococcal salpingitis","type":"broad"},{"name":"gonococcal salpingitis, chronic","type":"exact"}],"termid":"MONDO:0001575","xrefs":{"Monarch":{"xref_id":"0001575"}}}


id: PBO:0049993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huntingtin interacting protein 1 related","termid":"PBO:0049993"}


id: PBO:0031103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_osmotic_stress","termid":"PBO:0031103"}


id: GO:0005764
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small lytic vacuole that has cell cycle-independent morphology found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole","termid":"GO:0000323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"lysosome","secondary_identifiers":["NIF_Subcellular:sao585356902","Wikipedia:Lysosome"],"termid":"GO:0005764"}


id: PR:Q9UT70
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23249:SF9","OMA:SCHPO01316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit bet5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.16c","secondary_identifiers":["UniProtKB:Q9UT70"],"synonyms":[{"name":"Spom972h-TRAPPC1","type":"exact"}],"termid":"PR:Q9UT70"}


id: GO:0032991
data:
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