# terms

id: FYPO:0002719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell septum is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to septum","termid":"FYPO:0002718"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to septum","synonyms":[{"name":"decreased protein localisation to septum","type":"exact"},{"name":"decreased protein localization to cell septum","type":"exact"},{"name":"decreased protein localization to division septum","type":"exact"},{"name":"decreased protein localization to septum during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to septum during vegetative growth","type":"exact"},{"name":"reduced protein localization to septum","type":"exact"}],"termid":"FYPO:0002719"}


id: GO:0033207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an acceptor molecule, forming a beta-1,4 linkage.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-1,4-N-acetylgalactosaminyltransferase activity (obsolete GO:0033207)","synonyms":[{"name":"beta-1,4-GalNAc transferase activity","type":"exact"}],"termid":"GO:0033207"}


id: PBO:0056933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1-1","termid":"PBO:0056933"}


id: GO:0050988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The carboxylation of the N-terminal methionine of proteins to form the derivative N-carboxy-L-methionine.","definition_xrefs":["RESID:AA0363"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-methionine carboxylation (obsolete GO:0050988)","termid":"GO:0050988"}


id: MONDO:0003559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical adenosquamous carcinoma (obsolete MONDO:0003559)","termid":"MONDO:0003559","xrefs":{"Monarch":{"xref_id":"0003559"}}}


id: PBO:0060227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix remodeling associated 8","termid":"PBO:0060227"}


id: GO:0018602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichlorophenoxyacetate + 2-oxoglutarate + oxygen = 2,4-dichlorophenol + glyoxylate + succinate + CO2.","definition_xrefs":["UM-BBD_reactionID:r0274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity","secondary_identifiers":["MetaCyc:RXN-9863","RHEA:48984"],"termid":"GO:0018602"}


id: GO:0047255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactogen + UDP-galactose = 1,6-beta-D-galctosylgalactogen + UDP.","definition_xrefs":["MetaCyc:2.4.1.205-RXN","EC:2.4.1.205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactogen 6-beta-galactosyltransferase activity","synonyms":[{"name":"1,6-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:galactogen beta-1,6-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:galactogen beta-1,6-D-galactosyltransferase activity","type":"related"},{"name":"beta-(1,6)-D-galactosyltransferase activity","type":"related"},{"name":"galactogen 6beta-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-galactogen galactosyltransferase activity","type":"related"}],"termid":"GO:0047255"}


id: PBO:0018252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unknown HAD superfamily hydrolase","termid":"PBO:0018252"}


id: MONDO:0002050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melancholy feeling of sadness and despair.","definition_xrefs":["NCIT:C2982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depressive disorder","secondary_identifiers":["ICD9:311","DOID:1596","SCTID:35489007","MEDGEN:4229","MESH:D003866","UMLS:C0011581","MFOMD:0000013","ICD10CM:F32"],"synonyms":[{"name":"depression","type":"exact"},{"name":"melancholia","type":"related"},{"name":"melancholias","type":"related"},{"name":"mental depression","type":"exact"},{"name":"syndrome, depressive","type":"related"},{"name":"syndromes, depressive","type":"related"}],"termid":"MONDO:0002050","xrefs":{"Monarch":{"xref_id":"0002050"}}}


id: MONDO:0006257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the jejunum. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C6429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestinal neuroendocrine tumor G1","termid":"MONDO:0000540"},{"relation_name":"is_a","term_name":"colon neuroendocrine tumor G1","termid":"MONDO:0006155"},{"relation_name":"is_a","term_name":"jejunal neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"jejunal neuroendocrine tumor G1","secondary_identifiers":["UMLS:C1334296","EFO:1000308","MEDGEN:235235"],"synonyms":[{"name":"carcinoid tumor of jejunum","type":"exact"},{"name":"carcinoid tumor of the jejunum","type":"exact"},{"name":"carcinoid tumour of jejunum","type":"exact"},{"name":"carcinoid tumour of the jejunum","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of jejunum","type":"exact"},{"name":"jejunal NET G1","type":"exact"},{"name":"jejunal carcinoid tumor","type":"exact"},{"name":"jejunal carcinoid tumour","type":"exact"},{"name":"jejunum NET G1","type":"exact"},{"name":"jejunum carcinoid tumor","type":"exact"},{"name":"jejunum carcinoid tumor (disease)","type":"exact"},{"name":"jejunum carcinoid tumour","type":"exact"},{"name":"jejunum carcinoid tumour (disease)","type":"exact"},{"name":"jejunum neuroendocrine neoplasm G1","type":"exact"},{"name":"jejunum neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0006257","xrefs":{"Monarch":{"xref_id":"0006257"}}}


id: PBO:0071599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 16","termid":"PBO:0071599"}


id: PATO:0001909
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having three nuclei.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate","termid":"PATO:0001908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleate","termid":"PATO:0001909"}


id: PBO:0071181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 22","termid":"PBO:0071181"}


id: PBO:0056652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 19","termid":"PBO:0056652"}


id: GO:0140029
data:
  {"annotated_genes":["SJAG_03864","SJAG_02320","SJAG_03499","SJAG_02587","SJAG_03005","SJAG_03938","SJAG_01925","SJAG_04044","SJAG_01772","SJAG_02166","SJAG_00280","SJAG_03357","SJAG_01697","SJAG_04966","SJAG_04960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92404,120216,71520,94172,81859,76879,60654,81596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"},{"annotations":[101430,90439,103818,67285,116135,92574,60653,119719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The cellular processes that contribute to exocytosis.","definition_xrefs":["Wikipedia:Exocytosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_03005":null,"SJAG_03357":null,"SJAG_03499":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04960":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"exocytic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140029","terms_by_termid":{"GO:0006904":null,"GO:0090522":null}}


id: PBO:0036137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036137"}


id: PBO:0038972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A2b receptor","termid":"PBO:0038972"}


id: PBO:0062980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPN1 pseudogene 2","termid":"PBO:0062980"}


id: PBO:0082249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the mitochondrial processing protease (MPP); essential processing enzyme that cleaves the N-terminal targeting sequences from mitochondrially imported proteins","termid":"PBO:0082249"}


id: GO:2000626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"negative regulation of miRNA metabolic process","termid":"GO:2000629"},{"relation_name":"negatively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA catabolic process","synonyms":[{"name":"negative regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000626"}


id: FYPO:0003455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of the breakdown of arginine into other compounds, including proline, is decreased.","definition_xrefs":["GO:0019493","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased arginine catabolic process to proline","synonyms":[{"name":"decreased arginine catabolic process to proline during mitotic cell cycle","type":"related"},{"name":"decreased arginine catabolic process to proline during vegetative growth","type":"exact"},{"name":"decreased arginine catabolism to proline","type":"exact"},{"name":"reduced arginine catabolic process to proline","type":"exact"}],"termid":"FYPO:0003455"}


id: MONDO:0024626
data:
  {"annotated_genes":["SJAG_01351","SJAG_04743","SJAG_00739"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[88026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[87879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"},{"annotations":[88527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic cell dysfunction","termid":"MONDO:0024627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00739":null,"SJAG_01351":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"defective phagocytic cell engulfment","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:234585008","MEDGEN:585050","UMLS:C0398742"],"synonyms":[{"name":"defective phagocytic cell killing","type":"exact"}],"termid":"MONDO:0024626","terms_by_termid":{"MONDO:0009284":null,"MONDO:0009947":null,"MONDO:0010600":null,"MONDO:0044208":null},"xrefs":{"Monarch":{"xref_id":"0024626"}}}


id: MONDO:0018294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with nephropathy as a major feature (obsolete MONDO:0018294)","secondary_identifiers":["Orphanet:371207"],"synonyms":[{"name":"CDG with nephropathy as a major feature","type":"exact"}],"termid":"MONDO:0018294","xrefs":{"Monarch":{"xref_id":"0018294"}}}


id: MONDO:0001496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male genital organ stricture","secondary_identifiers":["SCTID:198064007","ICD9:608.85","UMLS:C0156316","DOID:12333","MEDGEN:510240"],"synonyms":[{"name":"stricture of male genital organs","type":"exact"}],"termid":"MONDO:0001496","xrefs":{"Monarch":{"xref_id":"0001496"}}}


id: MONDO:0006320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma is a malignant tumor of melanocytes, cells that are derived from the neural crest. Although most melanomas arise in the skin, they also may arise from mucosal surfaces or at other sites to which neural crest cells migrate. (PDQ)","definition_xrefs":["NCIT:C8711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-cutaneous melanoma","secondary_identifiers":["EFO:1000397","UMLS:C1334974","MEDGEN:233761"],"synonyms":[{"name":"extracutaneous melanoma","type":"exact"},{"name":"non-cutaneous melanoma","type":"exact"}],"termid":"MONDO:0006320","xrefs":{"Monarch":{"xref_id":"0006320"}}}


id: GO:0019302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-ribose, (ribo-pentose).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-ribose metabolic process","termid":"GO:0006014"},{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-ribose biosynthetic process","synonyms":[{"name":"D-ribose anabolism","type":"exact"},{"name":"D-ribose biosynthesis","type":"exact"},{"name":"D-ribose formation","type":"exact"},{"name":"D-ribose synthesis","type":"exact"}],"termid":"GO:0019302"}


id: PBO:0110827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type, Toe1","termid":"PBO:0110827"}


id: MONDO:0002527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dome-shaped, rapidly growing skin lesion composed of well differentiated squamous cells. It represents a proliferation of the infundibular epithelium of the hair follicle and its morphologic distinction from a well differentiated carcinoma may be difficult or impossible. Keratoacanthomas affect males more frequently than females and the majority tend to regress spontaneously. It has been suggested that keratoacanthoma represents a distinct subtype of squamous cell carcinoma of the skin.","definition_xrefs":["NCIT:C3146"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"epithelial skin neoplasm","termid":"MONDO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratoacanthoma","secondary_identifiers":["UMLS:C0022572","icd11.foundation:516478127","ICDO:8071/1","MEDGEN:5954","SCTID:254662007","MESH:D007636","DOID:3149"],"termid":"MONDO:0002527","xrefs":{"Monarch":{"xref_id":"0002527"}}}


id: PBO:0018242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med13","termid":"PBO:0018242"}


id: PR:Q9Y826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.06c","synonyms":[{"name":"Spom972h-meu31","type":"exact"}],"termid":"PR:Q9Y826"}


id: PBO:0068065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 370","termid":"PBO:0068065"}


id: GO:0033504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the floor plate over time from its initial formation until its mature state.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"neural tube development","termid":"GO:0021915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floor plate development","termid":"GO:0033504"}


id: MONDO:0015067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the colon.","definition_xrefs":["NCIT:C135212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system neuroendocrine tumor, grade 1/2","termid":"MONDO:0000386"},{"relation_name":"is_a","term_name":"colon neuroendocrine neoplasm","termid":"MONDO:0002882"},{"relation_name":"is_a","term_name":"epithelial tumor of colon","termid":"MONDO:0024479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neuroendocrine tumor of the colon, well differentiated, low or intermediate grade tumor","secondary_identifiers":["MEDGEN:1617490","UMLS:C4525742"],"synonyms":[{"name":"NET of the colon","type":"exact"},{"name":"carcinoid tumor of colon","type":"broad"},{"name":"carcinoid tumour of colon","type":"broad"},{"name":"colon neuroendocrine tumor","type":"broad"},{"name":"colon neuroendocrine tumour","type":"broad"},{"name":"colonic NET","type":"exact"},{"name":"neuroendocrine neoplasm of the colon","type":"broad"}],"termid":"MONDO:0015067","xrefs":{"Monarch":{"xref_id":"0015067"}}}


id: CHEBI:32035
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium hydroxide","termid":"CHEBI:32035"}


id: PBO:0001238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHA domain protein Tos4 (predicted)","termid":"PBO:0001238"}


id: PBO:0051275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-5","termid":"PBO:0051275"}


id: PBO:0083915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin; nucleates the formation of linear actin filaments; involved in processes such as budding and mitotic spindle orientation which require the formation of polarized actin cables; activity is regulated by Hof1p and by the Bud14p-Kel1p-Kel2p complex; dephosphorylated and delocalized from the division site in a Glc7p/Ref2p-dependent manner; functionally redundant with BNI1","termid":"PBO:0083915"}


id: GO:0021910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened that results in the spatial identity of regions along the dorsal-ventral axis of the spinal cord.","definition_xrefs":["GOC:tb","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","PMID:11262869","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"spinal cord dorsal/ventral patterning","termid":"GO:0021513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in ventral spinal cord patterning","synonyms":[{"name":"hedgehog signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"hh signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"smoothened signalling pathway in ventral spinal cord patterning","type":"exact"}],"termid":"GO:0021910"}


id: FYPO:0001950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion determined to be sequestered in a cell is lower than normal.","definition_xrefs":["PMID:2145281","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased sequestered calcium level","synonyms":[{"name":"decreased cellular sequestered calcium level","type":"exact"},{"name":"decreased levels of sequestered calcium","type":"exact"},{"name":"decreased sequestered calcium ion level","type":"exact"},{"name":"decreased sequestered calcium level during mitotic cell cycle","type":"related"},{"name":"decreased sequestered calcium level during vegetative growth","type":"exact"},{"name":"reduced sequestered calcium level","type":"exact"}],"termid":"FYPO:0001950"}


id: PBO:0067348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 445, pseudogene","termid":"PBO:0067348"}


id: MONDO:0009360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital hydrocephalus in which the cause of the disease is a mutation in the CCDC88C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"hydrocephalus, nonsyndromic, autosomal recessive 1","secondary_identifiers":["MEDGEN:854455","OMIM:236600","UMLS:C3887608"],"synonyms":[{"name":"CCDC88C congenital hydrocephalus","type":"exact"},{"name":"HYC1","type":"related"},{"name":"congenital hydrocephalus caused by mutation in CCDC88C","type":"exact"},{"name":"hydrocephalus, congenital, 1","type":"exact"},{"name":"hydrocephalus, nonsyndromic, autosomal recessive 1","type":"exact"},{"name":"hydrocephalus, nonsyndromic, autosomal recessive type 1","type":"exact"},{"name":"hydrocephaly","type":"related"},{"name":"ventriculomegaly","type":"related"}],"termid":"MONDO:0009360","xrefs":{"Monarch":{"xref_id":"0009360"}}}


id: PBO:0058497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5691","termid":"PBO:0058497"}


id: GO:0002920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a humoral immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of humoral immune response","termid":"GO:0002920"}


id: PBO:0011468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, thioredoxin family","termid":"PBO:0011468"}


id: PBO:0059357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 1","termid":"PBO:0059357"}


id: PBO:0085090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear exosome-associated nucleic acid binding protein; involved in RNA processing, surveillance, degradation, tethering, and export; forms a stable heterodimer with Rrp6p and regulates its exonucleolytic activity; rapidly degraded by the proteasome in the absence of Rrp6p; homolog of mammalian nuclear matrix protein C1D involved in regulation of DNA repair and recombination","termid":"PBO:0085090"}


id: MONDO:0012698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome type 2 in which the cause of the disease is a mutation in the SOX10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2E","secondary_identifiers":["GARD:15521","MEDGEN:398476","DOID:0110956","UMLS:C2700405","OMIM:611584"],"synonyms":[{"name":"SOX10 Waardenburg syndrome type 2","type":"exact"},{"name":"WS2E","type":"exact"},{"name":"WS2E with or without neurological involvement","type":"exact"},{"name":"Waardenburg syndrome type 2 caused by mutation in SOX10","type":"exact"},{"name":"Waardenburg syndrome type 2E with or without neurologic involvement","type":"exact"},{"name":"Waardenburg syndrome type IIE","type":"exact"},{"name":"Waardenburg syndrome, type 2E","type":"related"},{"name":"Waardenburg syndrome, type 2E, with or without neurologic involvement","type":"related"},{"name":"Ws2E, with or without neurologic involvement","type":"related"},{"name":"hypogonadotropic hypogonadism with anosmia and deafness with or without hypopigmentation","type":"exact"},{"name":"hypogonadotropic hypogonadism with anosmia and deafness, with or without hypopigmentation","type":"related"}],"termid":"MONDO:0012698","xrefs":{"Monarch":{"xref_id":"0012698"}}}


id: PBO:0026875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_DNA_double-strand_break_clipping","termid":"PBO:0026875"}


id: FYPO:0008360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitophagy is increased during stationary phase.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mitophagy","termid":"FYPO:0000501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased mitophagy during stationary phase","termid":"FYPO:0008360"}


id: GO:0080050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed development.","definition_xrefs":["PMID:19141706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed development","termid":"GO:0080050"}


id: PBO:0049387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF3C6 pseudogene 3","termid":"PBO:0049387"}


id: MONDO:0958194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial microsomia","termid":"MONDO:0015397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniofacial microsomia 2","secondary_identifiers":["MEDGEN:1830923","UMLS:C5781610","OMIM:620444"],"termid":"MONDO:0958194","xrefs":{"Monarch":{"xref_id":"0958194"}}}


id: GO:1904790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shelterin complex assembly.","definition_xrefs":["PMID:24270157","GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:nc","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"shelterin complex assembly","termid":"GO:0071573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of shelterin complex assembly","synonyms":[{"name":"regulation of Pot1 complex assembly","type":"exact"},{"name":"regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"regulation of shelterin complex formation","type":"exact"},{"name":"regulation of telosome assembly","type":"exact"}],"termid":"GO:1904790"}


id: MONDO:0003959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poorly differentiated neuroendocrine carcinoma that arises from the breast. It is characterized by the presence of large neuroendocrine cells and high mitotic activity.","definition_xrefs":["NCIT:C40356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast neuroendocrine neoplasm","termid":"MONDO:0002485"},{"relation_name":"is_a","term_name":"large cell neuroendocrine carcinoma","termid":"MONDO:0005057"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast large cell neuroendocrine carcinoma","secondary_identifiers":["MEDGEN:307310","UMLS:C1511316","DOID:6657"],"synonyms":[{"name":"breast large cell neuroendocrine carcinoma","type":"exact"},{"name":"large cell neuroendocrine carcinoma of breast","type":"exact"}],"termid":"MONDO:0003959","xrefs":{"Monarch":{"xref_id":"0003959"}}}


id: GO:0043657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell within a host organism. Includes the host plasma membrane and any external encapsulating structures such as the host cell wall and cell envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cellular component","termid":"GO:0018995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell","termid":"GO:0043657"}


id: PBO:0043516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 5","termid":"PBO:0043516"}


id: PBO:0091075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single stranded DNA specific 5'-3' exodeoxyribonuclease Exo5","termid":"PBO:0091075"}


id: FYPO:0005985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to acetic acid. Cells stop growing (and may die) at a concentration of acetic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to acetic acid","synonyms":[{"name":"hypersensitive to acetic acid","type":"exact"},{"name":"sensitive to acetic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to acetic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0005985"}


id: PBO:0043219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLK4 associating serine/arginine rich protein","termid":"PBO:0043219"}


id: GO:1901508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of acylglycerol transport.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of acylglycerol transport","termid":"GO:1901506"},{"relation_name":"positively_regulates","term_name":"acylglycerol transport","termid":"GO:0034196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of acylglycerol transport","synonyms":[{"name":"activation of acylglycerol transport","type":"narrow"},{"name":"activation of glyceride transport","type":"narrow"},{"name":"positive regulation of glyceride transport","type":"exact"},{"name":"up regulation of acylglycerol transport","type":"exact"},{"name":"up regulation of glyceride transport","type":"exact"},{"name":"up-regulation of acylglycerol transport","type":"exact"},{"name":"up-regulation of glyceride transport","type":"exact"},{"name":"upregulation of acylglycerol transport","type":"exact"},{"name":"upregulation of glyceride transport","type":"exact"}],"termid":"GO:1901508"}


id: SO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A point in nucleic acid where a cleavage event occurs.","direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_cleavage_site","synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:nucleotide_cleavage_site","type":"exact"},{"name":"nucleotide cleavage site","type":"exact"}],"termid":"SO:0002204"}


id: PBO:0000945
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CDC9","termid":"PBO:0000945"}


id: MONDO:1011585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pituitary-dependent hyperadrenocorticism that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"pituitary-dependent hyperadrenocorticism, non-human animal","termid":"MONDO:1011400"},{"relation_name":"is_a","term_name":"hyperadrenocorticism, dog","termid":"MONDO:1011530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary-dependent hyperadrenocorticism, dog","secondary_identifiers":["OMIA:000247-9615"],"termid":"MONDO:1011585","xrefs":{"Monarch":{"xref_id":"1011585"}}}


id: PBO:0002022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor A, Alp31","termid":"PBO:0002022"}


id: GO:0102804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oripavine + 2-oxoglutarate + O2 = morphinone + formaldehyde + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oripavine 6-O-demethylase activity (obsolete GO:0102804)","termid":"GO:0102804"}


id: GO:0048678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an axon injury stimulus.","definition_xrefs":["GOC:jid","GOC:dph","GOC:lm","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to axon injury","termid":"GO:0048678"}


id: GO:0050246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + questin = demethylsulochrin + NADP+.","definition_xrefs":["RHEA:10836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"questin monooxygenase (NADPH) activity","secondary_identifiers":["EC:1.14.13.43","KEGG_REACTION:R02417","MetaCyc:QUESTIN-MONOOXYGENASE-RXN"],"synonyms":[{"name":"questin oxygenase activity","type":"related"},{"name":"questin,NADPH:oxygen oxidoreductase (hydroxylating, anthraquinone-ring-opening)","type":"related"}],"termid":"GO:0050246"}


id: PBO:0083022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; included in the original annotation of Chromosome III but later deleted due to sequence corrections","termid":"PBO:0083022"}


id: GO:0035889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a developing otolith to the kinocilia of tether cells in the inner ear.","definition_xrefs":["GOC:dgh","PMID:14499652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"otolith development","termid":"GO:0048840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otolith tethering","termid":"GO:0035889"}


id: MONDO:0012069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus 3","secondary_identifiers":["MESH:C563900","OMIM:608586","UMLS:C1837809","MEDGEN:324883"],"synonyms":[{"name":"KTCN3","type":"exact"},{"name":"keratoconus 3","type":"exact"}],"termid":"MONDO:0012069","xrefs":{"Monarch":{"xref_id":"0012069"}}}


id: FYPO:0002407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable and curved along the long axis, and the cell diameter is larger than normal and the cell length is shorter than normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable curved stubby vegetative cell population (obsolete FYPO:0002407)","synonyms":[{"name":"curved stubby viable vegetative cell population","type":"exact"}],"termid":"FYPO:0002407"}


id: PBO:0059766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 40","termid":"PBO:0059766"}


id: MONDO:0020511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most frequent type of acute lymphoblastic leukemia. Approximately 75% of cases occur in children under six years of age. This is a good prognosis leukemia. In the pediatric age group the complete remission rate is approximately 95% and the disease free survival rate is 70%. Approximately 80% of children appear to be cured. In the adult age group the complete remission rate is 60-85%. (WHO, 2001)","definition_xrefs":["NCIT:C8644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"aggressive B-cell non-Hodgkin lymphoma","termid":"MONDO:0017595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"precursor B-cell acute lymphoblastic leukemia","secondary_identifiers":["ICDO:9836/3","NANDO:2200001","NANDO:2200022","GARD:16920","icd11.foundation:1099674056","MEDGEN:83896","Orphanet:99860","DOID:0080638","UMLS:C0349636"],"synonyms":[{"name":"B acute lymphoblastic leukaemia","type":"broad"},{"name":"B acute lymphoblastic leukemia","type":"broad"},{"name":"B cell acute lymphocytic leukaemia","type":"broad"},{"name":"B cell acute lymphocytic leukemia","type":"broad"},{"name":"B cell precursor type acute leukaemia","type":"exact"},{"name":"B cell precursor type acute leukemia","type":"exact"},{"name":"B-ALL","type":"broad"},{"name":"B-cell acute lymphoblastic leukaemia","type":"broad"},{"name":"B-cell acute lymphoblastic leukemia","type":"broad"},{"name":"B-cell acute lymphocytic leukaemia","type":"broad"},{"name":"B-cell acute lymphocytic leukemia","type":"broad"},{"name":"B-cell lymphoblastic leukaemia","type":"broad"},{"name":"B-cell lymphoblastic leukemia","type":"broad"},{"name":"B-cell precursor type acute leukaemia","type":"exact"},{"name":"B-cell precursor type acute leukemia","type":"exact"},{"name":"B-cell type acute leukaemia","type":"broad"},{"name":"B-cell type acute leukemia","type":"broad"},{"name":"B-precursor ALL","type":"exact"},{"name":"acute B cell lymphocytic leukaemia","type":"broad"},{"name":"acute B cell lymphocytic leukemia","type":"broad"},{"name":"acute B-cell lymphocytic leukaemia","type":"broad"},{"name":"acute B-cell lymphocytic leukemia","type":"broad"},{"name":"precursor B-cell acute lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor B-cell acute lymphocytic leukaemia","type":"exact"},{"name":"precursor B-cell acute lymphocytic leukemia","type":"exact"},{"name":"precursor B-cell acute lymphocytic leukemia/lymphoma","type":"exact"},{"name":"precursor B-lymphoblastic leukaemia","type":"exact"},{"name":"precursor B-lymphoblastic leukaemia (B-precursor ALL)","type":"exact"},{"name":"precursor B-lymphoblastic leukemia","type":"exact"},{"name":"precursor B-lymphoblastic leukemia (B-precursor ALL)","type":"exact"}],"termid":"MONDO:0020511","xrefs":{"Monarch":{"xref_id":"0020511"}}}


id: _global:during_which_starts
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_starts","secondary_identifiers":["RO:0002088"],"termid":"_global:during_which_starts"}


id: MONDO:0003515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma that arises from the fallopian tube. It is a rare tumor, often found incidentally.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"},{"relation_name":"is_a","term_name":"fallopian tube germ cell tumor","termid":"MONDO:0003392"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube teratoma","secondary_identifiers":["MEDGEN:309129","UMLS:C1517127","DOID:5564","NCIT:C40131"],"synonyms":[{"name":"fallopian tube teratoma","type":"exact"}],"termid":"MONDO:0003515","xrefs":{"Monarch":{"xref_id":"0003515"}}}


id: GO:0043660
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A symbiosome containing any of various structurally modified bacteria, such as those occurring on the root nodules of leguminous plants.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiosome","termid":"GO:0043659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"bacteroid-containing symbiosome","termid":"GO:0043660"}


id: GO:2001017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde axon cargo transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"retrograde axonal transport","termid":"GO:0008090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of retrograde axon cargo transport","synonyms":[{"name":"regulation of retrograde axonal transport","type":"exact"}],"termid":"GO:2001017"}


id: GO:0160025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sensory perception which causes the desire or reflex to scratch.","definition_xrefs":["PMID:29723501","Wikipedia:Itch","PMID:30734045","PMID:26015312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of itch","synonyms":[{"name":"pruritus","type":"exact"}],"termid":"GO:0160025"}


id: PBO:0083791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in vesicle-mediated ER to Golgi transport; binds membranes and functions during vesicle docking to the Golgi; required for assembly of the ER-to-Golgi SNARE complex","termid":"PBO:0083791"}


id: GO:0060391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of SMAD protein signal transduction.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SMAD protein signal transduction","termid":"GO:0060390"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090100"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"SMAD protein signal transduction","termid":"GO:0060395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of SMAD protein signal transduction","synonyms":[{"name":"positive regulation of SMAD protein import into nucleus","type":"narrow"},{"name":"positive regulation of SMAD protein nuclear translocation","type":"narrow"}],"termid":"GO:0060391"}


id: PBO:0052113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily C member 1","termid":"PBO:0052113"}


id: MONDO:0958098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the inferior vena cava","termid":"MONDO:0019830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary inferior vena cava aneurysm","secondary_identifiers":["MEDGEN:1863758","UMLS:C5925120","Orphanet:652678"],"termid":"MONDO:0958098","xrefs":{"Monarch":{"xref_id":"0958098"}}}


id: GO:0043994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 23) = CoA + histone H3 N6-acetyl-L-lysine (position 23).","definition_xrefs":["PMID:19056256","PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0034212","GO:0140096","GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H3K23 acetyltransferase activity","synonyms":[{"name":"histone H3-K23 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K23 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K23 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K23 specific)","type":"exact"}],"termid":"GO:0043994"}


id: GO:0035874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of copper ions.","definition_xrefs":["PMID:16467469","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"response to copper ion starvation","termid":"GO:0120126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to copper ion starvation","synonyms":[{"name":"cellular response to copper starvation","type":"exact"}],"termid":"GO:0035874"}


id: PBO:0079061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon TAC) 1-2","termid":"PBO:0079061"}


id: PBO:0070724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 29","termid":"PBO:0070724"}


id: PBO:0054479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1879","termid":"PBO:0054479"}


id: FYPO:0000229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal mitotic nuclear division, such that the septum physically divides the nucleus into two parts, giving rise to inviable daughter cells.","definition_xrefs":["PomBase:vw","PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"has_part","term_name":"premature septum assembly","termid":"FYPO:0003250"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"premature septum assembly","termid":"FYPO:0003250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000337","FYPO:0000004","FYPO:0000641","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"cut","secondary_identifiers":["FYPO:0000323","FYPO:0000322"],"synonyms":[{"name":"cut during mitotic cell cycle","type":"related"},{"name":"cut during vegetative growth","type":"exact"},{"name":"mitotic catastrophe","type":"related"},{"name":"septation following abnormal nuclear division","type":"exact"}],"termid":"FYPO:0000229"}


id: GO:0035372
data:
  {"annotated_genes":["SJAG_02045","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72454],"is_not":false,"summary":null,"term":"GO:0035372"},{"annotations":[98851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a microtubule.","definition_xrefs":["GOC:lb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to microtubule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to microtubule","type":"exact"}],"termid":"GO:0035372","terms_by_termid":{"GO:0035372":null,"GO:1904518":null}}


id: MONDO:0800382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 11","secondary_identifiers":["MEDGEN:480833","UMLS:C3279203"],"synonyms":[{"name":"JBTS11","type":"exact"}],"termid":"MONDO:0800382","xrefs":{"Monarch":{"xref_id":"0800382"}}}


id: PBO:0062838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 4","termid":"PBO:0062838"}


id: PBO:0069435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 700, pseudogene","termid":"PBO:0069435"}


id: PBO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint kinase Bub1","termid":"PBO:0018175"}


id: GO:0017151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DEAD/H-box RNA helicase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"DEAD/H-box RNA helicase binding","termid":"GO:0017151"}


id: GO:0062150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(+)-amorpha-4,11-diene + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = (+)-artemisinate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:16458889","RHEA:32999","PMID:23246612","PMID:16612385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"amorpha-4,11-diene 12-monooxygenase activity","secondary_identifiers":["EC:1.14.14.114"],"termid":"GO:0062150"}


id: PBO:0087577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Ada histone acetyltransferase complex; required for structural integrity of the complex; Ahc2p and Ahc1p are unique to the ADA complex and not shared with the related SAGA and SLIK complexes; Ahc2p may tether Ahc1p to the complex","termid":"PBO:0087577"}


id: MONDO:0020041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to a defect in testosterone metabolism by peripheral tissue (obsolete MONDO:0020041)","secondary_identifiers":["Orphanet:98086"],"termid":"MONDO:0020041","xrefs":{"Monarch":{"xref_id":"0020041"}}}


id: SO:0000732
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an unverified region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted","secondary_identifiers":["http://en.wikipedia.org/wiki/Predicted"],"termid":"SO:0000732"}


id: MONDO:0015406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrofacial arteriovenous metameric syndrome","termid":"MONDO:0015405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrofacial arteriovenous metameric syndrome type 1","secondary_identifiers":["SCTID:703267003","MEDGEN:825947","icd11.foundation:796738143","Orphanet:141194","GARD:19959","UMLS:C3840102"],"synonyms":[{"name":"CAMS1","type":"exact"}],"termid":"MONDO:0015406","xrefs":{"Monarch":{"xref_id":"0015406"}}}


id: PBO:0073440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm like with four mbt domains 2","termid":"PBO:0073440"}


id: FYPO:0007470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects histone modification during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification","termid":"FYPO:0006458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone modification during G0","synonyms":[{"name":"abnormal histone modification during cell quiescence","type":"exact"},{"name":"abnormal histone modification during quiescence","type":"exact"}],"termid":"FYPO:0007470"}


id: FYPO:0002444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the cytoplasm, visible as foci or dots by microscopy, is abnormally localized such that dots cannot be observed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"loss of punctate cytoplasmic protein localization","synonyms":[{"name":"abolished punctate cytoplasmic protein localization","type":"exact"},{"name":"cytoplasmic dots absent","type":"related"},{"name":"loss of punctate cytoplasmic protein localisation","type":"exact"},{"name":"loss of punctate cytoplasmic protein localization during mitotic cell cycle","type":"related"},{"name":"loss of punctate cytoplasmic protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0002444"}


id: MONDO:0014698
data:
  {"annotated_genes":["SJAG_00390"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86832],"is_not":false,"summary":null,"term":"MONDO:0014698"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00390":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microcephaly-intellectual disability-sensorineural hearing loss-epilepsy-abnormal muscle tone syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225276","MEDGEN:895574","Orphanet:457351","GARD:17804","OMIM:616577"],"synonyms":[{"name":"EHLMRS","type":"related"},{"name":"epilepsy, hearing loss, and intellectual disability syndrome","type":"related"},{"name":"epilepsy, hearing loss, and mental retardation syndrome","type":"related"},{"name":"microcephaly-intellectual disability-sensorineural deafness-epilepsy-abnormal muscle tone syndrome","type":"exact"},{"name":"neurodevelopmental disorder with hearing loss, seizures, and brain abnormalities","type":"exact"}],"termid":"MONDO:0014698","terms_by_termid":{"MONDO:0014698":null},"xrefs":{"Monarch":{"xref_id":"0014698"}}}


id: PBO:0044803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 103B","termid":"PBO:0044803"}


id: GO:0002737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of plasmacytoid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dendritic cell cytokine production","termid":"GO:0002731"},{"relation_name":"is_a","term_name":"regulation of plasmacytoid dendritic cell cytokine production","termid":"GO:0002736"},{"relation_name":"negatively_regulates","term_name":"plasmacytoid dendritic cell cytokine production","termid":"GO:0002373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasmacytoid dendritic cell cytokine production","synonyms":[{"name":"down regulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"down-regulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"downregulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"inhibition of plasmacytoid dendritic cell cytokine production","type":"narrow"}],"termid":"GO:0002737"}


id: MONDO:0008415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Scholte syndrome (obsolete MONDO:0008415)","secondary_identifiers":["OMIM:181515"],"termid":"MONDO:0008415","xrefs":{"Monarch":{"xref_id":"0008415"}}}


id: PBO:0082091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase; catalyzes synthesis of fructose-2,6-bisphosphate; inhibited by phosphoenolpyruvate and sn-glycerol 3-phosphate, expression induced by glucose and sucrose, transcriptional regulation involves protein kinase A","termid":"PBO:0082091"}


id: GO:2000973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphoid progenitor cell differentiation","termid":"GO:1905456"},{"relation_name":"regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pro-B cell differentiation","synonyms":[{"name":"regulation of pro-B cell development","type":"related"},{"name":"regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000973"}


id: PBO:0040805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betaine--homocysteine S-methyltransferase","termid":"PBO:0040805"}


id: PBO:0030929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_citrate_(Si)-synthase_activity","termid":"PBO:0030929"}


id: GO:1902365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["PMID:21131906","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to spindle pole body","synonyms":[{"name":"activation of protein localisation to spindle pole body","type":"narrow"},{"name":"activation of protein localization to spindle pole body","type":"narrow"},{"name":"positive regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up regulation of protein localization to spindle pole body","type":"exact"},{"name":"up-regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up-regulation of protein localization to spindle pole body","type":"exact"},{"name":"upregulation of protein localisation to spindle pole body","type":"exact"},{"name":"upregulation of protein localization to spindle pole body","type":"exact"}],"termid":"GO:1902365"}


id: PBO:0068435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 5, pseudogene","termid":"PBO:0068435"}


id: PBO:0080314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 78 pseudogene","termid":"PBO:0080314"}


id: PBO:0081287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 71","termid":"PBO:0081287"}


id: GO:0052088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a jasmonic acid-mediated signal transduction pathway in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","PMID:29222513","PMID:35698792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host jasmonic acid signaling","secondary_identifiers":["GO:0052082","GO:0052073","GO:0052283","GO:0052267","GO:0052266","GO:0052443","GO:0052271","GO:0052069","GO:0052068"],"synonyms":[{"name":"activation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"activation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"down regulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"down-regulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"downregulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"induction by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"induction by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"inhibition by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"modulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"narrow"},{"name":"modulation by organism of host JA-mediated defense response","type":"narrow"},{"name":"modulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction","type":"narrow"},{"name":"modulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"negative regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"narrow"},{"name":"negative regulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction","type":"narrow"},{"name":"negative regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"negative regulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"narrow"},{"name":"positive regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"stimulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"suppression by organism of host JA-mediated defense response","type":"exact"},{"name":"suppression by symbiont of host jasmonic acid-mediated defense response","type":"related"},{"name":"symbiont defense to host-produced jasmonic acid","type":"exact"},{"name":"up regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"up-regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052088"}


id: GO:0030151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a molybdenum ion (Mo).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"molybdenum ion binding","synonyms":[{"name":"Mo ion binding","type":"exact"},{"name":"molybdenum binding","type":"exact"}],"termid":"GO:0030151"}


id: PR:O94414
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lnp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein lunapark (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.07c","synonyms":[{"name":"Spom972h-lnp1","type":"exact"}],"termid":"PR:O94414"}


id: FYPO:0002510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"},{"relation_name":"is_a","term_name":"increased protein palmitoylation","termid":"FYPO:0002509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"increased protein palmitoylation during vegetative growth","synonyms":[{"name":"increased protein palmitoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002510"}


id: PBO:0059368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18C","termid":"PBO:0059368"}


id: PBO:0039786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 12B","termid":"PBO:0039786"}


id: MONDO:0001086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"optic atrophy","termid":"MONDO:0003608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial optic atrophy","secondary_identifiers":["DOID:10631","MEDGEN:509900","SCTID:111527005","ICD9:377.15","UMLS:C0155295"],"termid":"MONDO:0001086","xrefs":{"Monarch":{"xref_id":"0001086"}}}


id: GO:0008232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a heterodimer of Ecdysone receptor (EcR) and ultraspiracle (usp) bound to the ligand ecdysone, which activates transcription of target genes.","definition_xrefs":["PMID:10488333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ecdysone receptor holocomplex","termid":"GO:0008230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"activator ecdysone receptor complex","synonyms":[{"name":"activator ecdysone receptor holocomplex","type":"related"}],"termid":"GO:0008232"}


id: MONDO:0013269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the SERPINB6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 91","secondary_identifiers":["OMIM:613453","MEDGEN:462054","UMLS:C3150704","GARD:22636","DOID:0110536"],"synonyms":[{"name":"DFNB91","type":"narrow"},{"name":"SERPINB6 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 91","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 91","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in SERPINB6","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 91","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 91","type":"exact"},{"name":"deafness, autosomal recessive 91","type":"narrow"},{"name":"deafness, autosomal recessive type 91","type":"narrow"}],"termid":"MONDO:0013269","xrefs":{"Monarch":{"xref_id":"0013269"}}}


id: MONDO:0001476
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013783"}]},"cv_name":"mondo","definition":"An abnormality in which a part of a structure in one or both eyes is missing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1046","UMLS:C0009363","NCIT:C98877","Orphanet:194","MESH:D003103","ICD9:743.49","SCTID:93390002","DOID:12270"],"synonyms":[{"name":"coloboma of eye","type":"exact"},{"name":"coloboma of macula","type":"narrow"},{"name":"coloboma of the eye","type":"exact"},{"name":"congenital ocular coloboma","type":"narrow"},{"name":"ocular coloboma","type":"exact"}],"termid":"MONDO:0001476","terms_by_termid":{"MONDO:0013783":null},"xrefs":{"Monarch":{"xref_id":"0001476"}}}


id: MONDO:0004354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukemia that occurs during the neonatal period.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood leukemia","termid":"MONDO:0004355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"neonatal leukemia","secondary_identifiers":["UMLS:C0235813","MEDGEN:116003","NCIT:C3845","DOID:7756"],"synonyms":[{"name":"neonatal leukemia","type":"exact"}],"termid":"MONDO:0004354","xrefs":{"Monarch":{"xref_id":"0004354"}}}


id: GO:0016671
data:
  {"annotated_genes":["SJAG_04060","SJAG_00365","SJAG_00419"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036456"},{"annotations":[78796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033743"},{"annotations":[61030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008113"},{"annotations":[81714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004604"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00365":null,"SJAG_00419":null,"SJAG_04060":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, disulphide as acceptor","type":"exact"}],"termid":"GO:0016671","terms_by_termid":{"GO:0004604":null,"GO:0008113":null,"GO:0033743":null,"GO:0036456":null}}


id: GO:0032691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 beta production","termid":"GO:0032651"},{"relation_name":"is_a","term_name":"negative regulation of interleukin-1 production","termid":"GO:0032692"},{"relation_name":"negatively_regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050713","GO:0050724"],"synonyms":[{"name":"down regulation of interleukin-1 beta production","type":"exact"},{"name":"down-regulation of interleukin-1 beta production","type":"exact"},{"name":"downregulation of interleukin-1 beta production","type":"exact"},{"name":"inhibition of interleukin-1 beta production","type":"narrow"},{"name":"negative regulation of IL-1 beta production","type":"exact"},{"name":"negative regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-1 beta secretion","type":"narrow"}],"termid":"GO:0032691"}


id: MOD:00966
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal L-tryptophan residue by a formadehyde adduct to 1,2,3,4-tetrahydro-beta-carboline-3-carboxylic acid.","definition_xrefs":["DeltaMass:339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,2,3,4-tetrahydro-beta-carboline-3-carboxylic acid","termid":"MOD:00966"}


id: SO:0002009
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon encoding selenocysteine is changed, resulting in a different encoded amino acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rare_amino_acid_variant","termid":"SO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteine_loss","synonyms":[{"name":"selenocysteine loss","type":"exact"}],"termid":"SO:0002009"}


id: PBO:0027153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_histidine_level","termid":"PBO:0027153"}


id: GO:0072279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the renal epithelium narrows along one axis and lengthens in a perpendicular axis that contributes to the shaping of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension involved in nephron morphogenesis","termid":"GO:0072045"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in metanephric nephron morphogenesis","termid":"GO:0072279"}


id: GO:0036258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a multivesicular body, a type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.","definition_xrefs":["GOC:sart","PMID:11566881","PMID:19571114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multivesicular body organization","termid":"GO:0036257"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"multivesicular body assembly","synonyms":[{"name":"MVB biogenesis","type":"exact"},{"name":"MVB formation","type":"exact"},{"name":"multivesicular body biogenesis","type":"exact"}],"termid":"GO:0036258"}


id: PBO:0031032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_organization_during_vegetative_growth","termid":"PBO:0031032"}


id: GO:0110067
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"High affinity ammonium transporter complex that enables the transfer of ammonium from one side of a membrane to the other.","definition_xrefs":["PMID:23463773","GOC:bhm","PMID:17026539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ammonium transmembrane transporter complex","synonyms":[{"name":"AMT1 complex","type":"narrow"}],"termid":"GO:0110067"}


id: PBO:0060734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 3","termid":"PBO:0060734"}


id: GO:0000018
data:
  {"annotated_genes":["SJAG_02822","SJAG_02592","SJAG_03219","SJAG_01677","SJAG_00995","SJAG_01205","SJAG_03438","SJAG_00266","SJAG_04205"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111028,112278],"is_not":false,"summary":null,"term":"GO:0000018"},{"annotations":[109905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[109908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[81163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045951"},{"annotations":[90883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[111267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"},{"annotations":[90991,96224,118268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010520"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombination, a DNA metabolic process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00995":null,"SJAG_01205":null,"SJAG_01677":null,"SJAG_02592":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03438":null,"SJAG_04205":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"regulation of DNA recombination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000018","terms_by_termid":{"GO:0000018":null,"GO:0010520":null,"GO:0010569":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null,"GO:0045951":null}}


id: MONDO:0015038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type E (LCHe) is a form of lissencephaly with cerebellar hypoplasia, characterized by an abrupt transition from agyria to gyral simplification, near the boundary between frontal and parietal cortex, microcephaly (B1 3 SD) and brainstem hypoplasia.","definition_xrefs":["Orphanet:100015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type E","secondary_identifiers":["GARD:19735","UMLS:C5191422","icd11.foundation:252327835","MEDGEN:1676990"],"termid":"MONDO:0015038","xrefs":{"Monarch":{"xref_id":"0015038"}}}


id: PBO:0082544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein that contains a putative GPI-attachment site; secreted by regenerating protoplasts; up-regulated by activation of the cell integrity pathway, as mediated by Rlm1p; upregulated by cell wall damage via disruption of FKS1; PST1 has a paralog, ECM33, that arose from the whole genome duplication","termid":"PBO:0082544"}


id: PR:O94579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04818","PANTHER:PTHR11599:SF16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.06","secondary_identifiers":["UniProtKB:O94579"],"synonyms":[{"name":"Spom972h-PSMA2","type":"exact"}],"termid":"PR:O94579"}


id: PBO:0017627
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not a DNA polymerase delta subunit as initially detected in PMID:9326594","termid":"PBO:0017627"}


id: FYPO:0001611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular histidine level","termid":"FYPO:0001562"},{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased vacuolar histidine level","synonyms":[{"name":"decreased level of histidine in vacuole","type":"exact"},{"name":"decreased vacuolar L-histidine level","type":"exact"},{"name":"decreased vacuolar histidine level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar histidine level during vegetative growth","type":"exact"},{"name":"reduced level of histidine in vacuole","type":"exact"},{"name":"reduced vacuolar histidine level","type":"exact"}],"termid":"FYPO:0001611"}


id: PBO:0030727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_filament_organization","termid":"PBO:0030727"}


id: MONDO:0044640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2T","secondary_identifiers":["Orphanet:495274","GARD:17909"],"synonyms":[{"name":"AR-CMT2T","type":"exact"},{"name":"CMT2T","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2T","type":"exact"}],"termid":"MONDO:0044640","xrefs":{"Monarch":{"xref_id":"0044640"}}}


id: GO:1903643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of recombination hotspot binding.","definition_xrefs":["PMID:19436749","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of recombination hotspot binding (obsolete GO:1903643)","synonyms":[{"name":"activation of DNA binding, recombination hotspot","type":"narrow"},{"name":"activation of recombination hotspot binding","type":"narrow"},{"name":"positive regulation of DNA binding, recombination hotspot","type":"exact"},{"name":"up regulation of DNA binding, recombination hotspot","type":"exact"},{"name":"up regulation of recombination hotspot binding","type":"exact"},{"name":"up-regulation of DNA binding, recombination hotspot","type":"exact"},{"name":"up-regulation of recombination hotspot binding","type":"exact"},{"name":"upregulation of DNA binding, recombination hotspot","type":"exact"},{"name":"upregulation of recombination hotspot binding","type":"exact"}],"termid":"GO:1903643"}


id: PBO:0030369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_origin_firing_efficiency","termid":"PBO:0030369"}


id: GO:2000382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of mesoderm development","termid":"GO:2000380"},{"relation_name":"positively_regulates","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesoderm development","termid":"GO:2000382"}


id: GO:0018983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving Z-phenylacetaldoxime, a member of the glucosinolate group of compounds, a class of natural products that are gaining increasing interest as cancer-preventing agents and crop protectants.","definition_xrefs":["UM-BBD_pathwayID:pao"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldoxime metabolic process","termid":"GO:0019330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Z-phenylacetaldoxime metabolic process","synonyms":[{"name":"Z-phenylacetaldoxime metabolism","type":"exact"}],"termid":"GO:0018983"}


id: GO:1901280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-ribose 5-phosphate.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribose phosphate biosynthetic process","termid":"GO:0046390"},{"relation_name":"is_a","term_name":"D-ribose 5-phosphate metabolic process","termid":"GO:1901278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-ribose 5-phosphate biosynthetic process","synonyms":[{"name":"D-ribose 5-phosphate anabolism","type":"exact"},{"name":"D-ribose 5-phosphate biosynthesis","type":"exact"},{"name":"D-ribose 5-phosphate formation","type":"exact"},{"name":"D-ribose 5-phosphate synthesis","type":"exact"}],"termid":"GO:1901280"}


id: GO:0098888
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the presynaptic membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of synaptic membrane","termid":"GO:0099243"},{"relation_name":"part_of","term_name":"presynaptic membrane","termid":"GO:0042734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of presynaptic membrane","synonyms":[{"name":"extrinsic component of presynaptic plasma membrane","type":"exact"}],"termid":"GO:0098888"}


id: GO:0018152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-tyrosine to form a 3'-(1'-L-histidyl)-L-tyrosine protein cross-link.","definition_xrefs":["RESID:AA0270"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(1'-L-histidyl)-L-tyrosine (obsolete GO:0018152)","termid":"GO:0018152"}


id: GO:1900981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of phenazine biosynthetic process","termid":"GO:1900980"},{"relation_name":"negatively_regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phenazine biosynthetic process","synonyms":[{"name":"down regulation of acridizine biosynthesis","type":"related"},{"name":"down regulation of acridizine biosynthetic process","type":"related"},{"name":"down regulation of azophenylene biosynthesis","type":"related"},{"name":"down regulation of azophenylene biosynthetic process","type":"related"},{"name":"down regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"down regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"down regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"down regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"down regulation of phenazine biosynthetic process","type":"exact"},{"name":"down-regulation of acridizine biosynthesis","type":"related"},{"name":"down-regulation of acridizine biosynthetic process","type":"related"},{"name":"down-regulation of azophenylene biosynthesis","type":"related"},{"name":"down-regulation of azophenylene biosynthetic process","type":"related"},{"name":"down-regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"down-regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"down-regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"down-regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"down-regulation of phenazine biosynthetic process","type":"exact"},{"name":"downregulation of acridizine biosynthesis","type":"related"},{"name":"downregulation of acridizine biosynthetic process","type":"related"},{"name":"downregulation of azophenylene biosynthesis","type":"related"},{"name":"downregulation of azophenylene biosynthetic process","type":"related"},{"name":"downregulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"downregulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"downregulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"downregulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"downregulation of phenazine biosynthetic process","type":"exact"},{"name":"inhibition of acridizine biosynthesis","type":"related"},{"name":"inhibition of acridizine biosynthetic process","type":"related"},{"name":"inhibition of azophenylene biosynthesis","type":"related"},{"name":"inhibition of azophenylene biosynthetic process","type":"related"},{"name":"inhibition of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"inhibition of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"inhibition of dibenzopyrazine biosynthesis","type":"related"},{"name":"inhibition of dibenzopyrazine biosynthetic process","type":"related"},{"name":"inhibition of phenazine biosynthetic process","type":"narrow"},{"name":"negative regulation of acridizine biosynthesis","type":"related"},{"name":"negative regulation of acridizine biosynthetic process","type":"related"},{"name":"negative regulation of azophenylene biosynthesis","type":"related"},{"name":"negative regulation of azophenylene biosynthetic process","type":"related"},{"name":"negative regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"negative regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"negative regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"negative regulation of dibenzopyrazine biosynthetic process","type":"related"}],"termid":"GO:1900981"}


id: PBO:0028158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_5S_RNA_maturation","termid":"PBO:0028158"}


id: PBO:0079822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like autophagy activating kinase 1","termid":"PBO:0079822"}


id: PBO:0075518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member A","termid":"PBO:0075518"}


id: PBO:0031566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-catalytic_activity_phenotype","termid":"PBO:0031566"}


id: MONDO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a oculomotor nerve.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"third cranial nerve disorder","termid":"MONDO:0003546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculomotor nerve neoplasm","secondary_identifiers":["NCIT:C6994","UMLS:C1263895","ICD9:239.7","DOID:2817","SCTID:126969002","MEDGEN:220391"],"synonyms":[{"name":"IIIrd cranial nerve tumor","type":"exact"},{"name":"IIIrd cranial nerve tumour","type":"exact"},{"name":"cranial nerve III tumor","type":"related"},{"name":"cranial nerve III tumour","type":"related"},{"name":"neoplasm of oculomotor nerve","type":"exact"},{"name":"oculomotor nerve neoplasm","type":"exact"},{"name":"oculomotor nerve neoplasm (disease)","type":"exact"},{"name":"oculomotor nerve tumor","type":"exact"},{"name":"oculomotor nerve tumour","type":"exact"},{"name":"tumor of oculomotor nerve","type":"exact"},{"name":"tumour of oculomotor nerve","type":"exact"}],"termid":"MONDO:0002435","xrefs":{"Monarch":{"xref_id":"0002435"}}}


id: MONDO:0018413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete female infertility due to an anomaly of ovarian function of genetic origin (obsolete MONDO:0018413)","secondary_identifiers":["Orphanet:400022"],"termid":"MONDO:0018413","xrefs":{"Monarch":{"xref_id":"0018413"}}}


id: PBO:0091328
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Protein Sorting","termid":"PBO:0091328"}


id: PBO:0004442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1741 family protein","termid":"PBO:0004442"}


id: PBO:0029316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_mating_type_locus","termid":"PBO:0029316"}


id: MONDO:0014040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive malignant osteopetrosis in which the cause of the disease is a mutation in the SNX10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive osteopetrosis 8","secondary_identifiers":["UMLS:C3554478","MEDGEN:767392","OMIM:615085","DOID:0110940","GARD:15905","NCIT:C150556"],"synonyms":[{"name":"OPTB8","type":"exact"},{"name":"SNX10 autosomal recessive malignant osteopetrosis","type":"exact"},{"name":"SNX10 autosomal recessive osteopetrosis","type":"exact"},{"name":"autosomal recessive malignant osteopetrosis caused by mutation in SNX10","type":"exact"},{"name":"autosomal recessive osteopetrosis caused by mutation in SNX10","type":"exact"},{"name":"autosomal recessive osteopetrosis type 8","type":"exact"},{"name":"osteopetrosis, autosomal recessive 8","type":"related"},{"name":"osteopetrosis, autosomal recessive type 8","type":"exact"}],"termid":"MONDO:0014040","xrefs":{"Monarch":{"xref_id":"0014040"}}}


id: PBO:0091369
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rad57delta double mutant showed a repair profile very similar to that of the rad51delta single mutant","termid":"PBO:0091369"}


id: MONDO:0009184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa with diaphragmatic hernia","secondary_identifiers":["MESH:C565588","OMIM:226735","UMLS:C1856933","MEDGEN:346473"],"synonyms":[{"name":"epidermolysis bullosa with diaphragmatic hernia","type":"exact"}],"termid":"MONDO:0009184","xrefs":{"Monarch":{"xref_id":"0009184"}}}


id: GO:0090639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that involves a one-step direct condensation of choline with CDP-diacylglycerol to form phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY-6826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from choline and CDP-diacylglycerol","termid":"GO:0090639"}


id: PBO:0012016
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HGT1","termid":"PBO:0012016"}


id: PBO:0081469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF341 antisense RNA 1","termid":"PBO:0081469"}


id: PBO:0070509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 8","termid":"PBO:0070509"}


id: GO:0001174
data:
  {"annotated_genes":["SJAG_01523"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79039],"is_not":false,"summary":null,"term":"GO:0001174"}]},"cv_name":"biological_process","definition":"Any process involved in the selection of the specific location within the template strand of an RNA polymerase II promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["PMID:16826228","PMID:18846104","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcriptional start site selection","termid":"GO:0001173"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01523":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transcriptional start site selection at RNA polymerase II promoter","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0001174","terms_by_termid":{"GO:0001174":null}}


id: PBO:0018167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2-C, Ubc11/UbcP4","termid":"PBO:0018167"}


id: PBO:0052248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 17","termid":"PBO:0052248"}


id: PBO:0060110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 11","termid":"PBO:0060110"}


id: GO:1900724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein adenylylation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein adenylylation","termid":"GO:1900722"},{"relation_name":"positively_regulates","term_name":"protein adenylylation","termid":"GO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein adenylylation","synonyms":[{"name":"activation of protein AMPylation","type":"exact"},{"name":"activation of protein adenylation","type":"exact"},{"name":"activation of protein adenylylation","type":"narrow"},{"name":"activation of protein amino acid adenylylation","type":"exact"},{"name":"positive regulation of protein AMPylation","type":"exact"},{"name":"positive regulation of protein adenylation","type":"exact"},{"name":"positive regulation of protein amino acid adenylylation","type":"exact"},{"name":"up regulation of protein AMPylation","type":"exact"},{"name":"up regulation of protein adenylation","type":"exact"},{"name":"up regulation of protein adenylylation","type":"exact"},{"name":"up regulation of protein amino acid adenylylation","type":"exact"},{"name":"up-regulation of protein AMPylation","type":"exact"},{"name":"up-regulation of protein adenylation","type":"exact"},{"name":"up-regulation of protein adenylylation","type":"exact"},{"name":"up-regulation of protein amino acid adenylylation","type":"exact"},{"name":"upregulation of protein AMPylation","type":"exact"},{"name":"upregulation of protein adenylation","type":"exact"},{"name":"upregulation of protein adenylylation","type":"exact"},{"name":"upregulation of protein amino acid adenylylation","type":"exact"}],"termid":"GO:1900724"}


id: MONDO:1012576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypohidrotic ectodermal dysplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypohidrotic ectodermal dysplasia, non-human animal","termid":"MONDO:1012576","xrefs":{"Monarch":{"xref_id":"1012576"}}}


id: MONDO:0012895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dystonia characterized by autosomal recessive inheritance of progressive dystonia, dysphonia, dysarthria and neck torticollis that has material basis in variation in the chromosome region 20p11.2-q13.12.","definition_xrefs":["DOID:0090042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"torsion dystonia 17","secondary_identifiers":["GARD:10536","MEDGEN:391003","MESH:C567319","OMIM:612406","NANDO:1200530","Orphanet:370103","UMLS:C2676281"],"synonyms":[{"name":"DYT17","type":"related"},{"name":"dystonia 17, torsion, autosomal recessive","type":"related"},{"name":"dystonia-17, primary torsion","type":"exact"},{"name":"primary dystonia, DYT17 type","type":"related"},{"name":"torsion dystonia type 17","type":"exact"}],"termid":"MONDO:0012895","xrefs":{"Monarch":{"xref_id":"0012895"}}}


id: GO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial formation of a blastocyst from a solid ball of cells known as a morula.","definition_xrefs":["ISBN:0198542771","ISBN:0124020607","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"blastocyst development","termid":"GO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastocyst formation","synonyms":[{"name":"blastula formation","type":"related"}],"termid":"GO:0001825"}


id: GO:0004504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-glycine + ascorbate + O2 = peptidyl(2-hydroxyglycine) + dehydroascorbate + H2O.","definition_xrefs":["EC:1.14.17.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"peptidylglycine monooxygenase activity","secondary_identifiers":["MetaCyc:PEPTIDYLGLYCINE-MONOOXYGENASE-RXN","RHEA:21452"],"synonyms":[{"name":"PAM activity","type":"related"},{"name":"PAM-A","type":"related"},{"name":"PAM-B","type":"related"},{"name":"peptide alpha-amidating enzyme","type":"related"},{"name":"peptide alpha-amide synthase activity","type":"related"},{"name":"peptide-alpha-amide synthetase activity","type":"related"},{"name":"peptidyl alpha-amidating enzyme activity","type":"related"},{"name":"peptidylglycine 2-hydroxylase activity","type":"exact"},{"name":"peptidylglycine alpha-amidating monooxygenase activity","type":"related"},{"name":"peptidylglycine alpha-hydroxylase activity","type":"related"},{"name":"peptidylglycine,ascorbate:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"synthase, peptide alpha-amide","type":"related"}],"termid":"GO:0004504"}


id: GO:1905676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adaptive immune memory response.","definition_xrefs":["PMID:26831526","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response","termid":"GO:0002821"},{"relation_name":"is_a","term_name":"regulation of adaptive immune memory response","termid":"GO:1905674"},{"relation_name":"positively_regulates","term_name":"adaptive immune memory response","termid":"GO:0090716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adaptive immune memory response","synonyms":[{"name":"activation of adaptive immune memory response","type":"narrow"},{"name":"up regulation of adaptive immune memory response","type":"exact"},{"name":"up-regulation of adaptive immune memory response","type":"exact"},{"name":"upregulation of adaptive immune memory response","type":"exact"}],"termid":"GO:1905676"}


id: PBO:0044281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 4","termid":"PBO:0044281"}


id: PBO:0109605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A12","termid":"PBO:0109605"}


id: PBO:0027537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_histidine_or_lysine","termid":"PBO:0027537"}


id: GO:0050816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phosphorylated threonine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"phosphothreonine residue binding","synonyms":[{"name":"phosphothreonine binding","type":"related"}],"termid":"GO:0050816"}


id: PBO:0072419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 24","termid":"PBO:0072419"}


id: PBO:0041450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 putative open reading frame 163","termid":"PBO:0041450"}


id: SO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cre-Recombination target sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"resolution_site","termid":"SO:0000947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loxP_site","synonyms":[{"name":"Cre-recombination target region","type":"related"},{"name":"loxP site","type":"exact"}],"termid":"SO:0000346"}


id: MONDO:0005333
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007785"}]},"cv_name":"mondo","definition":"Abnormally elevated thyroxine level in the blood.","definition_xrefs":["EFO:0004127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"is_obsolete":false,"name":"hyperthyroxinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:6973","HGNC:399","UMLS:C0020551","MESH:D006981","DOID:2855"],"termid":"MONDO:0005333","terms_by_termid":{"MONDO:0007785":null},"xrefs":{"Monarch":{"xref_id":"0005333"}}}


id: PBO:0069046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 291, pseudogene","termid":"PBO:0069046"}


id: PBO:0085254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein of the plasma membrane; interacts with Mid2p; regulates the cell integrity pathway mediated by Pkc1p and Slt2p; the authentic protein is detected in a phosphorylated state in highly purified mitochondria","termid":"PBO:0085254"}


id: PBO:0029732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_aculeacin_A","termid":"PBO:0029732"}


id: PBO:0054878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2292","termid":"PBO:0054878"}


id: PBO:0085421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter responsible for the uptake of thiamine; contributes to uptake of 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranoside (acadesine); member of the major facilitator superfamily of transporters; mutation of human ortholog causes thiamine-responsive megaloblastic anemia","termid":"PBO:0085421"}


id: PBO:0077264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein with EGF like and two follistatin like domains 1","termid":"PBO:0077264"}


id: GO:0046301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-N-isopropylacetanilide biosynthetic process (obsolete GO:0046301)","synonyms":[{"name":"2-chloro-N-isopropylacetanilide anabolism","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthesis","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthetic process","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide formation","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide synthesis","type":"exact"}],"termid":"GO:0046301"}


id: FYPO:0005271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule plus-end directed mitotic chromosome migration is abnormal. In microtubule plus-end directed mitotic chromosome migration, chromosomes that are laterally attached to one or more mitotic spindle microtubules migrate towards the spindle equator via plus-end-directed movement along the microtubules.","definition_xrefs":["GO:0099606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000337","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule plus-end directed mitotic chromosome migration","synonyms":[{"name":"abnormal microtubule plus-end directed chromosome migration during mitosis","type":"exact"},{"name":"abnormal microtubule plus-end directed chromosome migration during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule plus-end directed mitotic chromosome migration during vegetative growth","type":"exact"},{"name":"abnormal plus-end directed chromosome gliding","type":"exact"}],"termid":"FYPO:0005271"}


id: GO:0060161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the dopamine receptor protein signaling pathway. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of dopamine receptor signaling pathway","termid":"GO:0060159"},{"relation_name":"positively_regulates","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of dopamine receptor signaling pathway","synonyms":[{"name":"positive regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060161"}


id: GO:0015171
data:
  {"annotated_genes":["SJAG_01770","SJAG_00877","SJAG_00051","SJAG_01998","SJAG_02062","SJAG_02946","SJAG_03899","SJAG_02955","SJAG_04295","SJAG_00626","SJAG_04718","SJAG_00149","SJAG_00699","SJAG_02947","SJAG_04957","SJAG_06598","SJAG_01994","SJAG_04296","SJAG_04787","SJAG_02029","SJAG_00019","SJAG_04725","SJAG_04903","SJAG_04135","SJAG_02144","SJAG_00522","SJAG_02150","SJAG_02133","SJAG_00015","SJAG_04984","SJAG_02113","SJAG_02941","SJAG_04637","SJAG_01096","SJAG_03400","SJAG_03829","SJAG_05342","SJAG_04588","SJAG_00543","SJAG_03256","SJAG_03827"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74943,77237,77270,78070,78579,78726,79387,79545,80473,81707,81967,82203,91530,101910,105428,120260,120261,120262,120263,120264,120265,120266,120267,120463],"is_not":false,"summary":null,"term":"GO:0015171"},{"annotations":[113838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140485"},{"annotations":[98437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000515"},{"annotations":[96448,97561,65143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015174"},{"annotations":[77203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[71807,79637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[97888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[80924,102248,99228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[111980,104704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[80919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[99229,80917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[104705,111981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[99230,104706,111982,102249,80921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[109843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[102241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[92444,80922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[80918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00015":null,"SJAG_00019":null,"SJAG_00051":null,"SJAG_00149":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00699":null,"SJAG_00877":null,"SJAG_01096":null,"SJAG_01770":null,"SJAG_01994":null,"SJAG_01998":null,"SJAG_02029":null,"SJAG_02062":null,"SJAG_02113":null,"SJAG_02133":null,"SJAG_02144":null,"SJAG_02150":null,"SJAG_02941":null,"SJAG_02946":null,"SJAG_02947":null,"SJAG_02955":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03827":null,"SJAG_03829":null,"SJAG_03899":null,"SJAG_04135":null,"SJAG_04295":null,"SJAG_04296":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04787":null,"SJAG_04903":null,"SJAG_04957":null,"SJAG_04984":null,"SJAG_05342":null,"SJAG_06598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-5660910","Reactome:R-HSA-351963","Reactome:R-HSA-5660694","Reactome:R-HSA-352059","Reactome:R-HSA-352052","Reactome:R-HSA-352136","Reactome:R-HSA-352371","Reactome:R-HSA-352029","Reactome:R-HSA-352354","Reactome:R-HSA-379426","Reactome:R-HSA-352119","Reactome:R-HSA-5653850","Reactome:R-HSA-375770","Reactome:R-HSA-352379","Reactome:R-HSA-375473","Reactome:R-HSA-5659674","Reactome:R-HSA-5659755","Reactome:R-HSA-375417","Reactome:R-HSA-352103","Reactome:R-HSA-352232","Reactome:R-HSA-8952726","Reactome:R-HSA-352107","Reactome:R-HSA-352108","Reactome:R-HSA-352347","Reactome:R-HSA-379415","Reactome:R-HSA-376200","Reactome:R-HSA-375768","Reactome:R-HSA-375790","Reactome:R-HSA-888592","Reactome:R-HSA-212642","Reactome:R-HSA-352364","GO:0015359","Reactome:R-HSA-378513","Reactome:R-HSA-352385","Reactome:R-HSA-352191","Reactome:R-HSA-375776","Reactome:R-HSA-352182","Reactome:R-HSA-379432","Reactome:R-HSA-375405","Reactome:R-HSA-5655702","Reactome:R-HSA-5659734","Reactome:R-HSA-210439","Reactome:R-HSA-5660890","Reactome:R-HSA-352158","Reactome:R-HSA-375487","Reactome:R-HSA-352174","Reactome:R-HSA-351987"],"synonyms":[{"name":"amino acid permease activity","type":"exact"},{"name":"amino acid transporter activity","type":"broad"},{"name":"amino acid/choline transmembrane transporter activity","type":"narrow"},{"name":"general amino acid permease activity","type":"related"},{"name":"hydroxy/aromatic amino acid permease activity","type":"related"}],"termid":"GO:0015171","terms_by_termid":{"GO:0000064":null,"GO:0000515":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0015171":null,"GO:0015174":null,"GO:0015182":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0033229":null,"GO:0034639":null,"GO:0061459":null,"GO:0140485":null}}


id: PBO:0090899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar serine protease Psp3","termid":"PBO:0090899"}


id: GO:0010091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the formation of branches in plant hair cells. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"trichome morphogenesis","termid":"GO:0010090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichome branching","secondary_identifiers":["GO:0048274"],"termid":"GO:0010091"}


id: MONDO:0006217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the gallbladder. It is characterized by the presence of glandular and squamous malignant epithelial components.","definition_xrefs":["NCIT:C7356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"},{"relation_name":"is_a","term_name":"gallbladder squamous cell carcinoma","termid":"MONDO:0006220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder adenosquamous carcinoma","secondary_identifiers":["UMLS:C1333741","MEDGEN:232539","EFO:1000264","DOID:5627","ONCOTREE:GBASC"],"synonyms":[{"name":"GBASC","type":"related"},{"name":"adenosquamous carcinoma of gallbladder","type":"exact"},{"name":"adenosquamous carcinoma of the gallbladder","type":"exact"},{"name":"adenosquamous gallbladder carcinoma","type":"exact"},{"name":"gall bladder adenosquamous carcinoma","type":"exact"},{"name":"gallbladder adenosquamous cancer","type":"exact"},{"name":"gallbladder adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0006217","xrefs":{"Monarch":{"xref_id":"0006217"}}}


id: PBO:0027877
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nucleosome_binding","termid":"PBO:0027877"}


id: GO:1904785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of asymmetric protein localization involved in cell fate determination.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17476329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"regulates","term_name":"asymmetric protein localization involved in cell fate determination","termid":"GO:0045167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of asymmetric protein localization involved in cell fate determination","synonyms":[{"name":"regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"regulation of cell fate commitment, asymmetric protein localization","type":"exact"}],"termid":"GO:1904785"}


id: GO:1904003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sebum secreting cell proliferation.","definition_xrefs":["PMID:16901790","GOC:hjd","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of sebum secreting cell proliferation","termid":"GO:1904002"},{"relation_name":"negatively_regulates","term_name":"sebum secreting cell proliferation","termid":"GO:1990654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sebum secreting cell proliferation","synonyms":[{"name":"down regulation of sebocyte proliferation","type":"related"},{"name":"down regulation of sebum secreting cell proliferation","type":"exact"},{"name":"down-regulation of sebocyte proliferation","type":"related"},{"name":"down-regulation of sebum secreting cell proliferation","type":"exact"},{"name":"downregulation of sebocyte proliferation","type":"related"},{"name":"downregulation of sebum secreting cell proliferation","type":"exact"},{"name":"inhibition of sebocyte proliferation","type":"related"},{"name":"inhibition of sebum secreting cell proliferation","type":"narrow"},{"name":"negative regulation of sebocyte proliferation","type":"related"}],"termid":"GO:1904003"}


id: MOD:01464
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to an L-methioninium (protonated L-methionine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-methionine (L-methioninium) residue","termid":"MOD:01464"}


id: GO:0031764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 galanin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galanin receptor binding","termid":"GO:0031763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 1 galanin receptor binding","synonyms":[{"name":"type 1 galanin receptor ligand","type":"narrow"}],"termid":"GO:0031764"}


id: GO:1990789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of thyroid gland epithelial cells, resulting in the expansion of the thyroid gland epithelial cell population.","definition_xrefs":["PMID:17646383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"thyroid gland development","termid":"GO:0030878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid gland epithelial cell proliferation","synonyms":[{"name":"Hurthle cell proliferation","type":"narrow"},{"name":"thyroid follicular cell proliferation","type":"narrow"}],"termid":"GO:1990789"}


id: PBO:0056320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 5","termid":"PBO:0056320"}


id: PBO:0117056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV3 antisense RNA 1","termid":"PBO:0117056"}


id: FYPO:0006090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione hydrolase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased peptidase activity","termid":"FYPO:0000667"},{"relation_name":"is_a","term_name":"abnormal glutathione hydrolase activity","termid":"FYPO:0006089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"increased glutathione hydrolase activity","termid":"FYPO:0006090"}


id: PBO:0045742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBF family member 4","termid":"PBO:0045742"}


id: PBO:0073545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3TC2 divergent transcript","termid":"PBO:0073545"}


id: FYPO:0002039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of deadenylation-independent decapping of nuclear-transcribed mRNA is decreased. All RNA decapping may be decreased, or one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"FYPO:0002038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA during mitotic cell cycle","type":"related"},{"name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA during vegetative growth","type":"exact"},{"name":"reduced deadenylation-independent decapping of nuclear-transcribed mRNA","type":"exact"}],"termid":"FYPO:0002039"}


id: GO:0039576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host JAK1 (Janus Kinase 1).","definition_xrefs":["PMID:16188985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of JAK1 activity","secondary_identifiers":["VZ:784","GO:0039515"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of JAK1 activity","type":"narrow"},{"name":"inhibition of host JAK activity by virus","type":"narrow"},{"name":"negative regulation by virus of host JAK","type":"narrow"},{"name":"negative regulation by virus of tyrosine phosphorylation of host STAT protein","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of JAK1 activity","type":"narrow"},{"name":"suppression by virus of host JAK1 activity","type":"narrow"},{"name":"suppression by virus of tyrosine phosphorylation of host STAT protein","type":"narrow"},{"name":"viral inhibition of tyrosine phosphorylation of host STAT protein","type":"narrow"}],"termid":"GO:0039576"}


id: FYPO:0007654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at heterochromatin islands occurs to a lower extent than normal.","definition_xrefs":["PMID:32269268","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007654"}


id: GO:0090013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of any TGF-beta receptor signaling pathway that contributes to the formation of the primitive streak.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta receptor signaling pathway involved in primitive streak formation (obsolete GO:0090013)","synonyms":[{"name":"regulation of transforming growth factor beta receptor signalling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090013"}


id: MONDO:0012072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial partial lipodystrophy, Kobberling type, is a very rare form of familial partial lipodystrophy (FPLD) of unknown etiology characterized by lipoatrophy that is confined to the limbs and a normal or increased fat distribution of the face, neck, and trunk. Arterial hypertension and diabetes have also been associated. Inheritance is thought to be autosomal dominant.","definition_xrefs":["Orphanet:79084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"familial partial lipodystrophy, Kobberling type","secondary_identifiers":["OMIM:608600","GARD:12598","SCTID:725035001","UMLS:C1720859","MEDGEN:318591","DOID:0070207"],"synonyms":[{"name":"FPLD1","type":"exact"},{"name":"familial partial lipodystrophy type 1","type":"exact"},{"name":"familial partial lipodystrophy type Köbberling","type":"related"},{"name":"familial partial lipodystrophy, Köbberling type","type":"related"},{"name":"lipodystrophy, familial partial, Kobberling type","type":"related"},{"name":"lipodystrophy, familial partial, type 1","type":"related"}],"termid":"MONDO:0012072","xrefs":{"Monarch":{"xref_id":"0012072"}}}


id: MONDO:1011772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hoof wall separation syndrome, non-human animal","secondary_identifiers":["OMIA:001897"],"termid":"MONDO:1011772","xrefs":{"Monarch":{"xref_id":"1011772"}}}


id: PBO:0040927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 2","termid":"PBO:0040927"}


id: PR:G2TRL1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.04c gene.","definition_xrefs":["UniProtKB:G2TRL1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C186.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.04c","synonyms":[{"name":"Spom972h-SPAC186.04c","type":"exact"}],"termid":"PR:G2TRL1"}


id: MONDO:0012733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive bestrophinopathy (ARB) is a retinal dystrophy, characterized by central visual loss in the first 2 decades of life, associated with an absent electrooculogram (EOG) light rise and a reduced electroretinogram (ERG).","definition_xrefs":["Orphanet:139455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"},{"relation_name":"is_a","term_name":"BEST1-related recessive retinopathy","termid":"MONDO:0700239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive bestrophinopathy","secondary_identifiers":["OMIM:611809","SCTID:723828008","GARD:10301","MESH:C567518","DOID:0050662","ICD10CM:H35.5","UMLS:C3888198","MEDGEN:854806"],"synonyms":[{"name":"ARB","type":"related"},{"name":"bestrophinopathy","type":"exact"},{"name":"bestrophinopathy, autosomal recessive","type":"related"},{"name":"retinopathy, Burgess-Black type","type":"exact"}],"termid":"MONDO:0012733","xrefs":{"Monarch":{"xref_id":"0012733"}}}


id: PR:Q9P6L7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rim2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6L7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C688.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.09","synonyms":[{"name":"Spom972h-rim2","type":"exact"}],"termid":"PR:Q9P6L7"}


id: GO:0072690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of population growth during which single celled organisms reproduce by budding, fission, or other asexual methods.","definition_xrefs":["GOC:mah","GOV:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-celled organism vegetative growth phase","secondary_identifiers":["GO:0062178"],"synonyms":[{"name":"stationary phase","type":"narrow"},{"name":"vegetative growth of a single-celled organism","type":"exact"}],"termid":"GO:0072690"}


id: PBO:0062896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacid CoA-transferase 2","termid":"PBO:0062896"}


id: GO:0015752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-ribose is transported across a lipid bilayer, from one side of a membrane to the other. As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"D-ribose transmembrane transport","synonyms":[{"name":"D-ribose transport","type":"related"}],"termid":"GO:0015752"}


id: PR:O14278
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug129 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 129 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.09c","synonyms":[{"name":"Spom972h-mug129","type":"exact"}],"termid":"PR:O14278"}


id: PBO:0082874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Covalently-bound cell wall protein of unknown function; identified as a cell cycle regulated SBF target gene; deletion mutants are highly resistant to treatment with beta-1,3-glucanase; has sequence similarity to YJL171C","termid":"PBO:0082874"}


id: MONDO:0020787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypomagnesemia, seizures, and intellectual disability","termid":"MONDO:0014631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"hypomagnesemia, seizures, and intellectual disability 1","secondary_identifiers":["MEDGEN:906582","OMIM:616418","UMLS:C4225333"],"synonyms":[{"name":"HOMGSMR1","type":"related"},{"name":"HYPOMAGNESEMIA, SEIZURES, AND MENTAL RETARDATION 1","type":"related"},{"name":"hypomagnesemia, seizures, and mental retardation","type":"broad"}],"termid":"MONDO:0020787","xrefs":{"Monarch":{"xref_id":"0020787"}}}


id: MONDO:0034122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)HX epimerase deficiency (obsolete MONDO:0034122)","termid":"MONDO:0034122","xrefs":{"Monarch":{"xref_id":"0034122"}}}


id: PR:Q10340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC106.19 gene.","definition_xrefs":["UniProtKB:Q10340","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C106.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.19","synonyms":[{"name":"Spom972h-SPBC106.19","type":"exact"}],"termid":"PR:Q10340"}


id: MONDO:0015660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sporadic fetal brain disruption sequence is a rare, non-syndromic, central nervous system malformation disorder characterized by severe microcephaly (average occipitofrontal circumference -5.8 SD), overlapping sutures, keel-like occipital bone prominence, scalp rugae with normal hair pattern and signs of neurological impairment. Brain imaging may show ventriculomegaly, cortical tissue deficit, and hydranencephaly.","definition_xrefs":["Orphanet:1665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic fetal brain disruption sequence","secondary_identifiers":["UMLS:C4706553","SCTID:763717004","MEDGEN:1636968","GARD:18734"],"termid":"MONDO:0015660","xrefs":{"Monarch":{"xref_id":"0015660"}}}


id: FYPO:0007753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains more than one meiotic spindle during the first meiotic nuclear division.","definition_xrefs":["PMID:32723864","PomBae:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple meiotic spindles","termid":"FYPO:0006390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"multiple spindles during meiosis I","synonyms":[{"name":"additional spindles present during meiosis I","type":"exact"},{"name":"extra spindles during meiosis I","type":"exact"},{"name":"increased number of spindles during meiosis I","type":"exact"},{"name":"multiple meiotic spindles during first meiotic nuclear division","type":"exact"},{"name":"multiple meiotic spindles during meiosis I","type":"exact"},{"name":"spindles present in greater numbers during meiosis I","type":"exact"}],"termid":"FYPO:0007753"}


id: PBO:0076938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuftelin interacting protein 11","termid":"PBO:0076938"}


id: GO:0033938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6) linkages between alpha-L-fucose and N-acetyl-D-glucosamine in glycopeptides such as immunoglobulin G glycopeptide and fucosyl-asialo-agalacto-fetuin.","definition_xrefs":["EC:3.2.1.127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-L-fucosidase activity","termid":"GO:0004560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"1,6-alpha-L-fucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.127-RXN"],"synonyms":[{"name":"1,6-L-fucosyl-N-acetyl-D-glucosaminylglycopeptide fucohydrolase activity","type":"related"}],"termid":"GO:0033938"}


id: GO:1905821
data:
  {"annotated_genes":["SJAG_03048","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104277,118662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chromosome condensation.","definition_xrefs":["PMID:17268547","GO_REF:0000058","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome condensation","termid":"GO:0060623"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"chromosome condensation","termid":"GO:0030261"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of chromosome condensation","type":"narrow"},{"name":"activation of eukaryotic chromosome condensation","type":"narrow"},{"name":"activation of nuclear chromosome condensation","type":"narrow"},{"name":"positive regulation of eukaryotic chromosome condensation","type":"exact"},{"name":"positive regulation of nuclear chromosome condensation","type":"exact"},{"name":"up regulation of chromosome condensation","type":"exact"},{"name":"up regulation of eukaryotic chromosome condensation","type":"exact"},{"name":"up regulation of nuclear chromosome condensation","type":"exact"},{"name":"up-regulation of chromosome condensation","type":"exact"},{"name":"up-regulation of eukaryotic chromosome condensation","type":"exact"},{"name":"up-regulation of nuclear chromosome condensation","type":"exact"},{"name":"upregulation of chromosome condensation","type":"exact"},{"name":"upregulation of eukaryotic chromosome condensation","type":"exact"},{"name":"upregulation of nuclear chromosome condensation","type":"exact"}],"termid":"GO:1905821","terms_by_termid":{"GO:1903380":null}}


id: PBO:0044804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 104A","termid":"PBO:0044804"}


id: FYPO:0003721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing G418.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on G418","synonyms":[{"name":"normal cell population growth in presence of G418","type":"exact"},{"name":"normal cell population growth on G418","type":"exact"},{"name":"normal cell population growth on Geneticin","type":"exact"},{"name":"normal cellular response to G418","type":"related"},{"name":"normal vegetative cell population growth on G418","type":"exact"}],"termid":"FYPO:0003721"}


id: PBO:0047925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(p15.1)","termid":"PBO:0047925"}


id: GO:2000472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell migration","termid":"GO:2000471"},{"relation_name":"negatively_regulates","term_name":"hematopoietic stem cell migration","termid":"GO:0035701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic stem cell migration","synonyms":[{"name":"negative regulation of hemopoietic stem cell migration","type":"exact"}],"termid":"GO:2000472"}


id: MONDO:0002982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small round cell tumor with neural differentiation arising from the soft tissues.","definition_xrefs":["NCIT:C27471"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"extraskeletal Ewing sarcoma","termid":"MONDO:0018270"},{"relation_name":"is_a","term_name":"peripheral primitive neuroectodermal tumor","termid":"MONDO:0018271"},{"relation_name":"is_a","term_name":"extraskeletal Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0021039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peripheral primitive neuroectodermal tumor of soft tissues","secondary_identifiers":["DOID:4389","UMLS:C1112437","MEDGEN:205115"],"synonyms":[{"name":"peripheral neuroectodermal tumor of soft tissues","type":"exact"},{"name":"peripheral neuroectodermal tumor of the soft tissues","type":"exact"},{"name":"peripheral neuroectodermal tumour of soft tissues","type":"exact"},{"name":"peripheral neuroectodermal tumour of the soft tissues","type":"exact"},{"name":"peripheral neuroepithelioma of soft tissues","type":"exact"},{"name":"peripheral neuroepithelioma of the soft tissues","type":"exact"},{"name":"peripheral primitive neuroectodermal tumor of soft tissues","type":"exact"},{"name":"soft tissue peripheral neuroepithelioma","type":"related"}],"termid":"MONDO:0002982","xrefs":{"Monarch":{"xref_id":"0002982"}}}


id: PBO:0057109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 199a-1","termid":"PBO:0057109"}


id: PBO:0002423
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.17.4.1","termid":"PBO:0002423"}


id: PBO:0051642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 1 pseudogene 1","termid":"PBO:0051642"}


id: PBO:0067671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 851, pseudogene","termid":"PBO:0067671"}


id: PBO:0063966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PU.1 (SPI1) induced regulator of S100A8 and S100A9 alarmin transcription 1","termid":"PBO:0063966"}


id: PBO:0014294
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Choline Sensitivity homolog","termid":"PBO:0014294"}


id: PBO:0073849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A3 antisense RNA 1","termid":"PBO:0073849"}


id: PBO:0047899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q22)","termid":"PBO:0047899"}


id: GO:0047232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide + UDP-N-acetyl-D-glucosamine = N-acetyl-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosyceramide + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,6-N-acetylglucosaminyltransferase activity (obsolete GO:0047232)","synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide beta-1,6-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-acetyllactosaminide beta1->6-acetylglucosaminyltransferase","type":"broad"}],"termid":"GO:0047232"}


id: GO:0090329
data:
  {"annotated_genes":["SJAG_02074","SJAG_03160","SJAG_03048","SJAG_03695","SJAG_01210","SJAG_01068","SJAG_04671","SJAG_03438","SJAG_03997","SJAG_04855","SJAG_02724","SJAG_03957","SJAG_00247","SJAG_03097","SJAG_02162","SJAG_00364","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[110840,99648,104266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[119269,114002,105224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[118216,90882,104272,108549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[97607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"},{"annotations":[104276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[105128],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[101239,108563,105129,110456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[117006,104174,101240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[101241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[104175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of DNA-templated DNA replication, the process in which new strands of DNA are synthesized.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA replication","termid":"GO:0006275"},{"relation_name":"regulates","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_00364":null,"SJAG_01068":null,"SJAG_01210":null,"SJAG_02074":null,"SJAG_02162":null,"SJAG_02724":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03957":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA-templated DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA-dependent DNA replication","type":"exact"}],"termid":"GO:0090329","terms_by_termid":{"GO:0011000":null,"GO:0031582":null,"GO:0071807":null,"GO:0090001":null,"GO:0090297":null,"GO:1902681":null,"GO:1903464":null,"GO:1903465":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: GO:0031299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + taurine = L-alanine + sulfoacetaldehyde.","definition_xrefs":["RHEA:10420","PMID:11082195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"taurine-pyruvate aminotransferase activity","secondary_identifiers":["KEGG_REACTION:R05652","MetaCyc:TAURINE-AMINOTRANSFERASE-RXN","EC:2.6.1.77"],"synonyms":[{"name":"Tpa","type":"related"},{"name":"taurine:pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0031299"}


id: GO:0006272
data:
  {"annotated_genes":["SJAG_01010","SJAG_04877","SJAG_04879","SJAG_00814","SJAG_05239","SJAG_00729","SJAG_02908","SJAG_02182","SJAG_00863","SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72114,76620],"is_not":false,"summary":null,"term":"GO:0006272"},{"annotations":[109283,95808,108912,97101,97133,106133,91399,106855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"The process in which an existing DNA strand is extended continuously in a 5' to 3' direction by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication. Leading strand elongation proceeds in the same direction as the replication fork.","definition_xrefs":["ISBN:0815316194","ISBN:071673706X","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in DNA replication","termid":"GO:0006271"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02908":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"leading strand elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006272","terms_by_termid":{"GO:0006272":null,"GO:1903460":null}}


id: PBO:0085834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery; protein abundance increases in response to DNA replication stress; has potential orthologs in Saccharomyces species and in Yarrowia lipolytica","termid":"PBO:0085834"}


id: GO:0052689
data:
  {"annotated_genes":["SJAG_04323","SJAG_01570","SJAG_02068","SJAG_04311","SJAG_01036","SJAG_02543","SJAG_01628","SJAG_04846","SJAG_04105","SJAG_05221","SJAG_02100","SJAG_00158","SJAG_02089","SJAG_04110","SJAG_00308","SJAG_02907","SJAG_00936","SJAG_04790","SJAG_01198","SJAG_01824","SJAG_04973","SJAG_03204","SJAG_05008","SJAG_03604","SJAG_00734","SJAG_01248","SJAG_02091","SJAG_02487","SJAG_02093"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72440],"is_not":false,"summary":null,"term":"GO:0052689"},{"annotations":[76260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003847"},{"annotations":[74812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017057"},{"annotations":[75338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051500"},{"annotations":[81916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061685"},{"annotations":[65928,116038,67316,72489,95766,68970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[80246,80545,79072,72635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047372"},{"annotations":[100525,103967,77711,79681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004045"},{"annotations":[74619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050185"},{"annotations":[72839,79169,80343,78188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[80405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051722"},{"annotations":[76757,76908,79177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004771"},{"annotations":[71489,95767,58459,60211,73228,100342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a carboxylic ester bond.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00308":null,"SJAG_00734":null,"SJAG_00936":null,"SJAG_01036":null,"SJAG_01198":null,"SJAG_01248":null,"SJAG_01570":null,"SJAG_01628":null,"SJAG_01824":null,"SJAG_02068":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02907":null,"SJAG_03204":null,"SJAG_03604":null,"SJAG_04105":null,"SJAG_04110":null,"SJAG_04311":null,"SJAG_04323":null,"SJAG_04790":null,"SJAG_04846":null,"SJAG_04973":null,"SJAG_05008":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"carboxylic ester hydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00630","GO:0004759","Reactome:R-HSA-5693691","GO:0004091","GO:0004302","EC:3.1.1.-","GO:0016789","Reactome:R-HSA-9749792","Reactome:R-HSA-8937442","UM-BBD_reactionID:r1025"],"synonyms":[{"name":"carboxylate esterase activity","type":"related"},{"name":"carboxylic esterase activity","type":"related"},{"name":"hydrolase activity acting on ester bonds","type":"related"}],"termid":"GO:0052689","terms_by_termid":{"GO:0003847":null,"GO:0004045":null,"GO:0004622":null,"GO:0004623":null,"GO:0004771":null,"GO:0004806":null,"GO:0017057":null,"GO:0047372":null,"GO:0050185":null,"GO:0051500":null,"GO:0051722":null,"GO:0052689":null,"GO:0061685":null}}


id: PBO:0063268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 14","termid":"PBO:0063268"}


id: GO:0009437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carnitine metabolic process","synonyms":[{"name":"carnitine metabolism","type":"exact"},{"name":"vitamin Bt metabolic process","type":"exact"},{"name":"vitamin Bt metabolism","type":"exact"}],"termid":"GO:0009437"}


id: MONDO:0975758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvenular haemangioma","secondary_identifiers":["MEDGEN:725856","Orphanet:675369","UMLS:C1304506"],"termid":"MONDO:0975758","xrefs":{"Monarch":{"xref_id":"0975758"}}}


id: GO:0003309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features of a type B pancreatic cell. A type B pancreatic cell is a cell located towards center of the islets of Langerhans that secretes insulin.","definition_xrefs":["GOC:dph","CL:0000169","PMID:11076772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"part_of","term_name":"endocrine pancreas development","termid":"GO:0031018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type B pancreatic cell differentiation","synonyms":[{"name":"pancreatic B cell differentiation","type":"exact"},{"name":"pancreatic beta cell differentiation","type":"exact"}],"termid":"GO:0003309"}


id: PBO:0049839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 3","termid":"PBO:0049839"}


id: MONDO:0009511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Larsen-like syndrome, B3GAT3 type is a rare, genetic, primary bone dysplasia characterized by laxity, dislocations and contractures of the joints, short stature, foot deformities (e.g. clubfeet), broad tips of fingers and toes, short neck, dysmorphic facial features (hypertelorism, downslanting palpebral fissures, upturned nose with anteverted nares, high arched palate) and various cardiac malformations. Severe disease is associated with multiple fractures, osteopenia, arachnodactyly and blue sclerae. A broad spectrum of additional features, including scoliosis, radio-ulnar synostosis, mild developmental delay, and various eye disorders (glaucoma, amblyopia, hyperopia, astigmatism, ptosis), are also reported.","definition_xrefs":["Orphanet:284139"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005267","MONDO:0005066"],"is_obsolete":false,"name":"Larsen-like syndrome, B3GAT3 type","secondary_identifiers":["MESH:C537874","OMIM:245600","DOID:0080575","GARD:17308","UMLS:C3278404","MEDGEN:480034"],"synonyms":[{"name":"JDSCD","type":"related"},{"name":"Larsen syndrome, autosomal recessive","type":"related"},{"name":"Larsen syndrome, autosomal recessive, formerly","type":"related"},{"name":"multiple JOINT dislocations, short stature, and craniofacial dysmorphism with or without congenital heart defects","type":"related"},{"name":"multiple JOINT dislocations, short stature, craniofacial dysmorphism, and congenital heart defects","type":"related"},{"name":"multiple Joint dislocations, short stature, and craniofacial Dysmorphism with or without congenital heart defects","type":"related"},{"name":"multiple joint dislocations, short stature, craniofacial dysmorphism, with or without congenital heart defects","type":"exact"},{"name":"multiple joint dislocations-short stature-craniofacial dysmorphism-congenital heart defects syndrome","type":"exact"}],"termid":"MONDO:0009511","xrefs":{"Monarch":{"xref_id":"0009511"}}}


id: PBO:0028248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_actin_cable","termid":"PBO:0028248"}


id: GO:0008219
data:
  {"annotated_genes":["SJAG_01527","SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98421],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0012502"},{"annotations":[75883,81386],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0043065"}]},"cv_name":"biological_process","definition":"Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538).","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","PMID:25236395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_01527":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell death","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"accidental cell death","type":"related"},{"name":"necrosis","type":"related"}],"termid":"GO:0008219","terms_by_termid":{"GO:0012502":null,"GO:0043065":null}}


id: MOD:00339
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteinyl hydrogenase diiron subcluster.","definition_xrefs":["PubMed:10694885","RESID:AA0334","Unimod:439#C","PubMed:9836629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl hydrogenase diiron subcluster","synonyms":[{"name":"1,7-biscarbonyl-1-(cystein-S-yl)-8-oxo-4-aza-2lambda(3),6 lambda(3)-dithia-1,7-diferratricyclo[4.2.0.0(2,7)]octane-1,7-dicarbonitrile","type":"exact"},{"name":"Diironsubcluster","type":"related"},{"name":"L-cysteinyl hydrogenase diiron subcluster","type":"exact"},{"name":"METAL Diiron subcluster","type":"exact"},{"name":"hydrogenase diiron subcluster","type":"related"},{"name":"mu-carbonyl-dicarbonyl-1kappaC,2kappaC-dicyanido-1kappaC,2kappaC-cysteinato-1kS-1,2-azadimethanthiol-1kS,2kS'-diiron","type":"exact"}],"termid":"MOD:00339"}


id: GO:0160187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables size- and charge-selective transport of solutes through a tight junction barrier paracellularly, across the epithelium.","definition_xrefs":["PMID:30665499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter activity","termid":"GO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"paracellular tight junction channel activity","synonyms":[{"name":"claudin pore","type":"exact"}],"termid":"GO:0160187"}


id: MONDO:1010835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilson disease that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wilson disease, non-human animal","termid":"MONDO:1010164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson disease, cattle","secondary_identifiers":["OMIA:001071-9913"],"termid":"MONDO:1010835","xrefs":{"Monarch":{"xref_id":"1010835"}}}


id: PBO:0034678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CRE_promoter_during_cellular_response_to_miconazole","termid":"PBO:0034678"}


id: PR:O42659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apc14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.05c","synonyms":[{"name":"20S cyclosome/APC complex protein apc14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-apc14","type":"exact"},{"name":"overlapping meiotic transcript protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42659"}


id: PBO:0003396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gap1","termid":"PBO:0003396"}


id: GO:1990202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of FMN reductase activity. Reduces FMN to FMNH2 in a NAD(P)H-dependent manner. In E.coli, consists of a SsuE dimer.","definition_xrefs":["PMID:10480865","GOC:bhm","PMID:16997955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"FMN reductase complex","synonyms":[{"name":"FMN oxidoreductase complex, NAD(P)H-dependent","type":"related"},{"name":"FMN reductase complex, NAD(P)H-dependent","type":"exact"},{"name":"SsuE complex","type":"narrow"},{"name":"flavin oxidoreductase complex, NAD(P)H-dependent","type":"broad"}],"termid":"GO:1990202"}


id: MONDO:0007708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kasabach-Merritt syndrome (KMS), also known as hemangioma-thrombocytopenia syndrome, is a rare disorder characterized by profound thrombocytopenia, microangiopathic hemolytic anemia, and subsequent consumptive coagulopathy in association with vascular tumors, particularly kaposiform hemangioendothelioma or tufted angioma.","definition_xrefs":["Orphanet:2330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kasabach-Merritt syndrome","secondary_identifiers":["MedDRA:10058423","SCTID:86635005","MESH:D059885","UMLS:C0221025","ICD9:287.39","MEDGEN:65122","icd11.foundation:2059601885","GARD:70","NANDO:2100297","NANDO:2201035","NCIT:C3821","OMIM:141000"],"synonyms":[{"name":"KMP","type":"related"},{"name":"Kasabach Merritt phenomenon","type":"exact"},{"name":"Kasabach Merritt syndrome","type":"exact"},{"name":"Kasabach-Merritt Phenomenon","type":"exact"},{"name":"Kasabach-Merritt syndrome","type":"exact"},{"name":"hemangioma thrombocytopenia syndrome","type":"related"},{"name":"hemangioma-hemorrhage syndrome","type":"exact"},{"name":"hemangioma-thrombocytopenia syndrome","type":"exact"},{"name":"hemangiomatosis with thrombocytopenia","type":"exact"},{"name":"thrombocytopenia-hemangioma syndrome","type":"exact"},{"name":"thrombopenia-hemangioma syndrome","type":"exact"}],"termid":"MONDO:0007708","xrefs":{"Monarch":{"xref_id":"0007708"}}}


id: MOD:02052
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-methionine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-methionine residue","synonyms":[{"name":"XlnkMet","type":"exact"}],"termid":"MOD:02052"}


id: PBO:0003266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp21 (predicted)","termid":"PBO:0003266"}


id: PBO:0076035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 32C","termid":"PBO:0076035"}


id: PBO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83A antisense RNA 1","termid":"PBO:0046962"}


id: PBO:0044756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 39B pseudogene 2","termid":"PBO:0044756"}


id: MONDO:0001315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinical syndrome characterized by palpitation, shortness of breath, labored breathing, subjective complaints of effort and discomfort, all following slight physical exertion. Other symptoms may be dizziness, tremulousness, sweating, and insomnia. Neurocirculatory asthenia is most typically seen as a form of anxiety disorder.","definition_xrefs":["MESH:D009449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatoform disorder","termid":"MONDO:0003117"},{"relation_name":"is_a","term_name":"anxiety disorder","termid":"MONDO:0005618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurocirculatory asthenia","secondary_identifiers":["UMLS:C1535893","ICD9:306.2","SCTID:191962000","DOID:11569","MEDGEN:283928"],"synonyms":[{"name":"Da Costa's syndrome","type":"exact"},{"name":"Krishaber's disease","type":"exact"},{"name":"cardiovascular malfunction arising from mental factors","type":"exact"},{"name":"cardiovascular neurosis","type":"exact"}],"termid":"MONDO:0001315","xrefs":{"Monarch":{"xref_id":"0001315"}}}


id: PBO:0045923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 15, pseudogene","termid":"PBO:0045923"}


id: PBO:0000375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase SWIRM2 (predicted)","termid":"PBO:0000375"}


id: GO:1904116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vasopressin stimulus.","definition_xrefs":["PMID:22811487","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vasopressin","termid":"GO:1904116"}


id: GO:1903647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chlorophyll catabolic process.","definition_xrefs":["GO_REF:0000058","PMID:24719469","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll catabolic process","termid":"GO:0010271"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole catabolic process","termid":"GO:1901405"},{"relation_name":"negatively_regulates","term_name":"chlorophyll catabolic process","termid":"GO:0015996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"negative regulation of chlorophyll catabolic process","synonyms":[{"name":"down regulation of chlorophyll breakdown","type":"exact"},{"name":"down regulation of chlorophyll catabolic process","type":"exact"},{"name":"down regulation of chlorophyll catabolism","type":"exact"},{"name":"down regulation of chlorophyll degradation","type":"exact"},{"name":"down-regulation of chlorophyll breakdown","type":"exact"},{"name":"down-regulation of chlorophyll catabolic process","type":"exact"},{"name":"down-regulation of chlorophyll catabolism","type":"exact"},{"name":"down-regulation of chlorophyll degradation","type":"exact"},{"name":"downregulation of chlorophyll breakdown","type":"exact"},{"name":"downregulation of chlorophyll catabolic process","type":"exact"},{"name":"downregulation of chlorophyll catabolism","type":"exact"},{"name":"downregulation of chlorophyll degradation","type":"exact"},{"name":"inhibition of chlorophyll breakdown","type":"narrow"},{"name":"inhibition of chlorophyll catabolic process","type":"narrow"},{"name":"inhibition of chlorophyll catabolism","type":"narrow"},{"name":"inhibition of chlorophyll degradation","type":"narrow"},{"name":"negative regulation of chlorophyll breakdown","type":"exact"},{"name":"negative regulation of chlorophyll catabolism","type":"exact"},{"name":"negative regulation of chlorophyll degradation","type":"exact"}],"termid":"GO:1903647"}


id: PBO:0002874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase e1 component alpha subunit Pda1 (predicted)","termid":"PBO:0002874"}


id: GO:0090511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell division process where the division plane is parallel to the surface of the organ. It creates a new cell layer or cell file.","definition_xrefs":["GOC:tair_curators","PMID:21391814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periclinal cell division","termid":"GO:0090511"}


id: PBO:0017967
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability","termid":"PBO:0017967"}


id: MONDO:0019725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and autoimmune disease with epilepsy (obsolete MONDO:0015657)","termid":"MONDO:0015657"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary interstitial lung disease specific to childhood associated with a connective tissue disease (obsolete MONDO:0017021)","termid":"MONDO:0017021"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"excluded_subClassOf","term_name":"thrombotic microangiopathy","termid":"MONDO:0019737"},{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pediatric systemic lupus erythematosus","secondary_identifiers":["GARD:19219","MEDGEN:698153","Orphanet:93552","UMLS:C1274834"],"synonyms":[{"name":"SLE, paediatric onset","type":"exact"},{"name":"SLE, pediatric onset","type":"exact"}],"termid":"MONDO:0019725","xrefs":{"Monarch":{"xref_id":"0019725"}}}


id: PBO:0050575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate 2-O-sulfotransferase 1","termid":"PBO:0050575"}


id: MONDO:0013264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the OPTN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 12","secondary_identifiers":["OMIM:613435","MEDGEN:462042","UMLS:C3150692","GARD:15663","DOID:0060203"],"synonyms":[{"name":"ALS12","type":"exact"},{"name":"OPTN amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 12","type":"exact"},{"name":"amyotrophic lateral sclerosis 12 with or without frontotemporal dementia","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in OPTN","type":"exact"},{"name":"amyotrophic lateral sclerosis type 12","type":"exact"}],"termid":"MONDO:0013264","xrefs":{"Monarch":{"xref_id":"0013264"}}}


id: MONDO:1010623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Situs inversus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"situs inversus, non-human animal","termid":"MONDO:1010068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus, horse","secondary_identifiers":["OMIA:001102-9796"],"termid":"MONDO:1010623","xrefs":{"Monarch":{"xref_id":"1010623"}}}


id: GO:0038028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An insulin receptor signaling pathway in which the signal is transmitted via the phosphatidylinositol 3-kinase cascade.","definition_xrefs":["PMID:20696212","GOC:bf","GOC:signaling","PMID:19322168"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin receptor signaling pathway via phosphatidylinositol 3-kinase (obsolete GO:0038028)","synonyms":[{"name":"insulin receptor signaling pathway via PI3K cascade","type":"exact"},{"name":"insulin receptor signaling pathway via phosphatidylinositol 3-kinase cascade","type":"related"},{"name":"insulin receptor signaling via PI3K","type":"exact"},{"name":"insulin receptor signalling pathway via phosphatidylinositol 3-kinase cascade","type":"exact"}],"termid":"GO:0038028"}


id: PBO:0109355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR choline and heme transporter 1","termid":"PBO:0109355"}


id: PBO:0113233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of the filamentous growth pathway; inhibits invasive growth by dampening the activity of the filamentous MAPK pathway; localizes to the cell wall and to the vacuole and cell periphery in HTP studies; deletion improves xylose fermentation in industrially engineered strains; nonessential gene","termid":"PBO:0113233"}


id: PBO:0048769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glia maturation factor gamma","termid":"PBO:0048769"}


id: PR:Q9USY0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug131 gene.","definition_xrefs":["UniProtKB:Q9USY0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 131 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.06c","synonyms":[{"name":"Spom972h-mug131","type":"exact"}],"termid":"PR:Q9USY0"}


id: MONDO:0013067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cataract (disease) in which the cause of the disease is a mutation in the FOXE3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 34 multiple types","secondary_identifiers":["OMIM:612968","DOID:0110230","GARD:15599","MESH:C567835","MEDGEN:442822","UMLS:C2751822"],"synonyms":[{"name":"CATC3","type":"exact"},{"name":"CTRCT34","type":"exact"},{"name":"FOXE3 cataract (disease)","type":"exact"},{"name":"autosomal recessive congenital cataract 3","type":"exact"},{"name":"cataract (disease) caused by mutation in FOXE3","type":"exact"},{"name":"cataract 34 multiple types with or without microcornea","type":"exact"},{"name":"cataract 34, multiple types","type":"related"},{"name":"cataract 34, multiple types, with or without microcornea","type":"related"},{"name":"cataract, autosomal recessive congenital 3","type":"related"}],"termid":"MONDO:0013067","xrefs":{"Monarch":{"xref_id":"0013067"}}}


id: MONDO:0009385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperleucine-Isoleucinemia","secondary_identifiers":["MEDGEN:82821","UMLS:C0268574","MESH:C562674","SCTID:7046009","OMIM:238340"],"synonyms":[{"name":"hyperleucine-Isoleucinemia","type":"exact"}],"termid":"MONDO:0009385","xrefs":{"Monarch":{"xref_id":"0009385"}}}


id: PBO:0003749
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.50","termid":"PBO:0003749"}


id: PBO:0042805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide kinase","termid":"PBO:0042805"}


id: PBO:0071848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 43","termid":"PBO:0071848"}


id: MONDO:0011937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peeling skin syndrome in which the cause of the disease is a mutation in the CSTA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exfoliative ichthyosis","termid":"MONDO:0017339"},{"relation_name":"is_a","term_name":"peeling skin syndrome","termid":"MONDO:0019347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"peeling skin syndrome 4","secondary_identifiers":["MESH:C564309","OMIM:607936","GARD:18426","UMLS:C4225407","DOID:0070523","MEDGEN:895692"],"synonyms":[{"name":"CSTA peeling skin syndrome","type":"exact"},{"name":"PSS4","type":"related"},{"name":"ichthyosis bullosa of Siemens-like","type":"related"},{"name":"ichthyosis, exfoliative, autosomal recessive","type":"related"},{"name":"peeling skin syndrome 4","type":"exact"},{"name":"peeling skin syndrome caused by mutation in CSTA","type":"exact"},{"name":"peeling skin syndrome type 4","type":"exact"}],"termid":"MONDO:0011937","xrefs":{"Monarch":{"xref_id":"0011937"}}}


id: PBO:0040201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 14","termid":"PBO:0040201"}


id: PBO:0086923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyridoxine (pyridoxamine) phosphate oxidase; has homologs in E. coli and Myxococcus xanthus; transcription is under the general control of nitrogen metabolism","termid":"PBO:0086923"}


id: MONDO:0016577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Biliary atresia with splenic malformation syndrome (BASM) designates the association of biliary atresia and splenic abnormalities (mainly polysplenia and less frequently asplenia, double spleen). Cardiac defect, situs inversus and a preduodenal portal vein can also be present. It represents the embryonal or syndromic form of biliary atresia. It affects newborns or infants and is characterized by jaundice, pale stools, dark urine, failure to thrive, hepatomegaly, coagulopathy, anemia and often palpable spleen.","definition_xrefs":["Orphanet:244283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biliary atresia with splenic malformation syndrome","secondary_identifiers":["SCTID:717156002","GARD:20652","UMLS:C4274029","MEDGEN:907806"],"synonyms":[{"name":"BASM syndrome","type":"exact"}],"termid":"MONDO:0016577","xrefs":{"Monarch":{"xref_id":"0016577"}}}


id: MONDO:0001212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A otitis media which involves transudation of fluid in the middle ear without pus formation.","definition_xrefs":["DOID:11180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otitis media","termid":"MONDO:0005441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-suppurative otitis media","secondary_identifiers":["ICD9:381.4","SCTID:275481002","MEDGEN:543351","UMLS:C0271446"],"synonyms":[{"name":"nonsuppurative otitis media","type":"exact"}],"termid":"MONDO:0001212","xrefs":{"Monarch":{"xref_id":"0001212"}}}


id: MONDO:0017911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cleft lip/palate-ectodermal dysplasia syndrome (obsolete MONDO:0017911)","termid":"MONDO:0017911","xrefs":{"Monarch":{"xref_id":"0017911"}}}


id: FYPO:0007342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more triglycerides measured in lipid droplets is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased triglyceride level in lipid droplet","synonyms":[{"name":"decreased TAG level in lipid droplet","type":"exact"},{"name":"decreased lipid droplet triglyceride level","type":"exact"},{"name":"decreased triacylglycerol level in lipid droplet","type":"exact"},{"name":"decreased triglyceride accumulation in lipid droplet","type":"related"},{"name":"reduced cellular triglyceride level in lipid droplet","type":"exact"}],"termid":"FYPO:0007342"}


id: MONDO:0009093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatoleukodystrophy is characterized by the association of a progressive leukodystrophy marked by generalized mental and motor impairment with the presence of thickened and wrinkled skin. It has been described in a Japanese brother and sister born to healthy parents. Both patients died in early childhood.","definition_xrefs":["Orphanet:1659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"dermatoleukodystrophy","secondary_identifiers":["OMIM:221790","MEDGEN:387794","SCTID:733044009","UMLS:C1857314","GARD:1813","MESH:C538220"],"synonyms":[{"name":"Dermatoleukodystrophy","type":"exact"}],"termid":"MONDO:0009093","xrefs":{"Monarch":{"xref_id":"0009093"}}}


id: GO:0006465
data:
  {"annotated_genes":["SJAG_03737","SJAG_02867","SJAG_01179","SJAG_04583","SJAG_02809","SJAG_03121","SJAG_03910","SJAG_01750","SJAG_03648","SJAG_03261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62589,65220,66506,66881,69349,70869,75661,77807,77854,79165],"is_not":false,"summary":null,"term":"GO:0006465"}]},"cv_name":"biological_process","definition":"The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell.","definition_xrefs":["GOC:mah","PMID:31214988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01179":null,"SJAG_01750":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_03121":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03737":null,"SJAG_03910":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"signal peptide processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-159782"],"synonyms":[{"name":"leader peptide processing","type":"exact"}],"termid":"GO:0006465","terms_by_termid":{"GO:0006465":null}}


id: MONDO:0016394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sporadic infantile bilateral necrosis is the sporadic form of infantile bilateral striatal necrosis (IBSN), a syndrome of bilateral symmetric spongy degeneration of the caudate nucleaus, putamen and globus pallidus characterized by developmental regression, choreoathetosis and dystonia progressing to spastic quadriparesis.","definition_xrefs":["Orphanet:225147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile bilateral striatal necrosis","termid":"MONDO:0015518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"sporadic infantile bilateral striatal necrosis","secondary_identifiers":["GARD:20549","ICD10CM:G23.2","UMLS:C4087175","MEDGEN:1672494","icd11.foundation:1174703901"],"synonyms":[{"name":"ABSN","type":"exact"},{"name":"acute bilateral striatal necrosis","type":"exact"},{"name":"sporadic IBSN","type":"exact"},{"name":"sporadic infantile striatonigral degeneration","type":"exact"},{"name":"sporadic infantile striatonigral necrosis","type":"exact"}],"termid":"MONDO:0016394","xrefs":{"Monarch":{"xref_id":"0016394"}}}


id: PBO:0090999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex TPR repeat subunit Tom70","termid":"PBO:0090999"}


id: MONDO:0400004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phrynoderma is a form of follicular hyperkeratosis seen in young children and adolescents due to nutritional deficiencies. It is clinically characterized by discrete, follicular, skin-colored papules with keratotic plugs distributed over elbows, knees, extensor extremities, and buttocks.","definition_xrefs":["NCIT:C112827","PMID:21965845","doi:10.4103/2319-7250.175657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"phrynoderma","secondary_identifiers":["icd11.foundation:1716182078","UMLS:C0334013","MEDGEN:83101"],"termid":"MONDO:0400004","xrefs":{"Monarch":{"xref_id":"0400004"}}}


id: MONDO:0001353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease caused by infection with by Bordetella parapertussis. The symptoms are similar but less severe than Bordetella pertussis whooping cough.","definition_xrefs":["PMID:9542925"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pertussis","termid":"MONDO:0005077"},{"relation_name":"is_a","term_name":"bordetellosis","termid":"MONDO:0037872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bordetella parapertussis infectious disease","secondary_identifiers":["ICD10CM:A37.1","DOID:11750","ICD9:033.1","SCTID:77116006","MEDGEN:546794","UMLS:C0275742"],"synonyms":[{"name":"Bordetella parapertussis caused disease or disorder","type":"exact"},{"name":"Bordetella parapertussis disease or disorder","type":"exact"},{"name":"Bordetella parapertussis infection","type":"related"},{"name":"Bordetella parapertussis whooping cough","type":"related"},{"name":"infection caused by Bordetella parapertussis","type":"related"},{"name":"infection due to Bordetella parapertussis","type":"exact"}],"termid":"MONDO:0001353","xrefs":{"Monarch":{"xref_id":"0001353"}}}


id: PBO:0087302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Site-specific recombinase encoded on the 2-micron plasmid; required for 2-micron plasmid propagation as part of a plasmid amplification system that compensates for any copy number decreases caused by missegregation events","termid":"PBO:0087302"}


id: PBO:0069979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1274, pseudogene","termid":"PBO:0069979"}


id: GO:0090735
data:
  {"annotated_genes":["SJAG_03221","SJAG_02267","SJAG_02079","SJAG_01708","SJAG_04530","SJAG_00757","SJAG_01410","SJAG_02708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66093,74063,76867,66934,77548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[80335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[112255,109595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a DNA repair complex.","definition_xrefs":["GOC:pg","PMID:27113759","PMID:27233470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"DNA repair complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090735","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null}}


id: PBO:0070475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 10","termid":"PBO:0070475"}


id: GO:0002729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated immunity","termid":"GO:0002717"},{"relation_name":"is_a","term_name":"positive regulation of cytokine production involved in immune response","termid":"GO:0002720"},{"relation_name":"is_a","term_name":"regulation of natural killer cell cytokine production","termid":"GO:0002727"},{"relation_name":"positively_regulates","term_name":"natural killer cell cytokine production","termid":"GO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell cytokine production","synonyms":[{"name":"activation of natural killer cell cytokine production","type":"narrow"},{"name":"positive regulation of NK cell cytokine production","type":"exact"},{"name":"stimulation of natural killer cell cytokine production","type":"narrow"},{"name":"up regulation of natural killer cell cytokine production","type":"exact"},{"name":"up-regulation of natural killer cell cytokine production","type":"exact"},{"name":"upregulation of natural killer cell cytokine production","type":"exact"}],"termid":"GO:0002729"}


id: PBO:0030551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_arginine_import","termid":"PBO:0030551"}


id: GO:0060224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal rod cell. A retinal rod cell is one of the two photoreceptor subtypes in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"is_a","term_name":"regulation of photoreceptor cell differentiation","termid":"GO:0046532"},{"relation_name":"regulates","term_name":"retinal rod cell fate commitment","termid":"GO:0060223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal rod cell fate commitment","termid":"GO:0060224"}


id: PBO:0066858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 158","termid":"PBO:0066858"}


id: PBO:0116732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRF2 general transcription factor IIIB subunit","termid":"PBO:0116732"}


id: PBO:0059115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mov10 RISC complex RNA helicase","termid":"PBO:0059115"}


id: PBO:0087249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine MAP kinase; coordinates expression of all 19S regulatory particle assembly-chaperones (RACs) to control proteasome abundance; involved in regulating maintenance of cell wall integrity, cell cycle progression, nuclear mRNA retention in heat shock, septum assembly; required for mitophagy, pexophagy; affects recruitment of mitochondria to phagophore assembly site; plays role in adaptive response of cells to cold; regulated by the PKC1-mediated signaling pathway","termid":"PBO:0087249"}


id: PBO:0076192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 1","termid":"PBO:0076192"}


id: MONDO:0013778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pseudohypoaldosteronism type 2 in which the cause of the disease is a mutation in the WNK1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 2","termid":"MONDO:0019162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism type 2C","secondary_identifiers":["UMLS:C1840391","OMIM:614492","MEDGEN:327089","Orphanet:88940","icd11.foundation:1052840113","MESH:C564162","GARD:16777"],"synonyms":[{"name":"PHA2C","type":"exact"},{"name":"WNK1 pseudohypoaldosteronism type 2","type":"exact"},{"name":"pseudohypoaldosteronism type 2 caused by mutation in WNK1","type":"exact"},{"name":"pseudohypoaldosteronism, type 2C","type":"related"},{"name":"pseudohypoaldosteronism, type IIC","type":"related"}],"termid":"MONDO:0013778","xrefs":{"Monarch":{"xref_id":"0013778"}}}


id: SO:1000055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The DNA mutation changes, usually destroys, the first coding triplet of a gene. Usually prevents translation although another initiator codon may be used.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000055 sequence_variant_causing_initiator_codon_change_in_transcript (obsolete SO:1000055)","synonyms":[{"name":"mutation causing initiator codon change in transcript","type":"related"},{"name":"sequence variant causing initiator codon change in transcript","type":"exact"}],"termid":"SO:1000055"}


id: GO:0047183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-4-coumaroyl-CoA + an anthocyanidin 3,5-di-O-beta-D-glucoside = an anthocyanidin 3-O-beta-D-glucoside 5-O-beta-D-[(6-O-(E)-4-coumaroyl)glucoside] + CoA. Caffeoyl-CoA can also act as an acyl donor.","definition_xrefs":["EC:2.3.1.153","RHEA:15661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"anthocyanin 5-(6'''-hydroxycinnamoyltransferase) activity","secondary_identifiers":["MetaCyc:RXN-7945"],"synonyms":[{"name":"anthocyanin 5-aromatic acyltransferase activity","type":"exact"},{"name":"hydroxycinnamoyl-CoA:anthocyanidin 3,5-diglucoside 5-O-glucoside-6'''-O-hydroxycinnamoyltransferase activity","type":"related"}],"termid":"GO:0047183"}


id: PBO:0077269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM9B antisense RNA 1","termid":"PBO:0077269"}


id: PBO:0027572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology_during_mitotic_interphase","termid":"PBO:0027572"}


id: GO:0047287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-D-galactoside + CMP-N-acetyl-beta-neuraminate = an N-acetyl-alpha-neuraminyl-(2->6)-beta-D-galactosyl derivative + CMP + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lactosylceramide alpha-2,6-N-sialyltransferase activity (obsolete GO:0047287)","termid":"GO:0047287"}


id: GO:1903576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-arginine stimulus.","definition_xrefs":["PMID:6394628","GOC:mr","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-arginine","termid":"GO:1903576"}


id: PBO:0040559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GNTL1 pseudogene 2","termid":"PBO:0040559"}


id: PBO:0041476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 65","termid":"PBO:0041476"}


id: MONDO:0012341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any celiac disease in which the cause of the disease is a mutation in the CTLA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 3","secondary_identifiers":["OMIM:609755","UMLS:C1857845","MEDGEN:347563"],"synonyms":[{"name":"CELIAC3","type":"related"},{"name":"CTLA4 celiac disease","type":"exact"},{"name":"CTLA4 coeliac disease","type":"exact"},{"name":"celiac disease caused by mutation in CTLA4","type":"exact"},{"name":"celiac disease, susceptibility to, 3","type":"exact"},{"name":"celiac disease, susceptibility to, type 3","type":"exact"},{"name":"coeliac disease caused by mutation in CTLA4","type":"exact"},{"name":"coeliac disease, susceptibility to, type 3","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 3","type":"related"},{"name":"susceptibility to celiac disease 3","type":"related"},{"name":"susceptibility to coeliac disease 3","type":"related"}],"termid":"MONDO:0012341","xrefs":{"Monarch":{"xref_id":"0012341"}}}


id: PBO:0044213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin Z","termid":"PBO:0044213"}


id: MONDO:0001979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of the gastrointestinal tract. It is typically caused by the rapid emptying of undigested food from the stomach to the small intestine following gastroesophageal surgery but may be seen secondary to diabetes or the use of certain medications. Clinical signs may be seen 30-60 minutes after eating (early dumping): cramping, nausea, vomiting and diarrhea or they may be seen 1-3 hours later as a result of hyperinsulinemic hypoglycemia (late dumping): sweating, dizziness, confusion and heart palpitations. Untreated, the clinical course progresses to malnutrition and weight loss.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"postgastrectomy syndrome","termid":"MONDO:0004566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"dumping syndrome","secondary_identifiers":["MESH:D004377","UMLS:C0013288","MEDGEN:8501","EFO:1001307","NCIT:C2994","DOID:14495","icd11.foundation:237191235"],"synonyms":[{"name":"dumping (jejunal) syndrome","type":"exact"},{"name":"jejunal syndrome","type":"exact"}],"termid":"MONDO:0001979","xrefs":{"Monarch":{"xref_id":"0001979"}}}


id: MONDO:0044220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group, 1 system (obsolete MONDO:0044220)","secondary_identifiers":["OMIM:110800"],"synonyms":[{"name":"I blood Group system","type":"related"},{"name":"II","type":"related"},{"name":"II blood Group system","type":"related"},{"name":"adult I phenotype","type":"related"},{"name":"blood group, I system","type":"related"},{"name":"blood group, Ii","type":"exact"}],"termid":"MONDO:0044220","xrefs":{"Monarch":{"xref_id":"0044220"}}}


id: PR:P78920
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nap2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein C2D10.11C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.11c","synonyms":[{"name":"Spom972h-nap2","type":"exact"}],"termid":"PR:P78920"}


id: PR:Q9USL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isoleucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04430","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.08c","secondary_identifiers":["UniProtKB:Q9USL3"],"synonyms":[{"name":"IleRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IARS2","type":"exact"},{"name":"isoleucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USL3"}


id: PBO:0027090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_cell_death_during_mitosis","termid":"PBO:0027090"}


id: MONDO:0017112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated unilateral hemispheric cerebellar hypoplasia is a rare, non-syndromic cerebellar malformation characterized by loss of volume in the right or left cerebellar hemisphere, with intact vermis and no other neurological anomalies (i.e. normal cerebral hemispheres, fourth ventricle, pons, medulla and midbrain). Patients may be asymptomatic or may present developmental and speech delay, hypotonia, abnormal ocular movements, persistent headaches and/or peripheral vertigo and ataxia. Neurological examination is otherwise normal.","definition_xrefs":["Orphanet:269218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated unilateral hemispheric cerebellar hypoplasia","secondary_identifiers":["MEDGEN:1638819","GARD:20995","UMLS:C4707885","SCTID:766934006","icd11.foundation:1960392411"],"termid":"MONDO:0017112","xrefs":{"Monarch":{"xref_id":"0017112"}}}


id: PBO:0031433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_organization","termid":"PBO:0031433"}


id: SO:0000696
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short oligonucleotide sequence, of length on the order of 10's of bases; either single or double stranded.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Oligonucleotide"],"synonyms":[{"name":"oligonucleotide","type":"exact"}],"termid":"SO:0000696"}


id: PR:O14143
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3G6.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3G6.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.07","synonyms":[{"name":"Spom972h-SPAC3G6.07","type":"exact"}],"termid":"PR:O14143"}


id: GO:0035895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of blood mast cell degranulation in another organism. Mast cell degranulation is the regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell.","definition_xrefs":["PMID:21549739","GOC:bf","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of mast cell degranulation in another organism (obsolete GO:0035895)","synonyms":[{"name":"modulation of mast cell degranulation in other organism","type":"exact"},{"name":"regulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0035895"}


id: PBO:0050743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 5","termid":"PBO:0050743"}


id: PBO:0003361
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.1","termid":"PBO:0003361"}


id: GO:0120259
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains the 7SK snRNA. The 7SK snRNP plays a central role in RNA polymerase II elongation control by regulating the availability of active P-TEFb.","definition_xrefs":["PMID:18249148","PMID:28431135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small nuclear ribonucleoprotein complex","termid":"GO:0030532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"7SK snRNP","synonyms":[{"name":"snRNP 7SK","type":"exact"}],"termid":"GO:0120259"}


id: FYPO:0008399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a lipid peroxidation is increased during stationary phase.","definition_xrefs":["PMID:35657410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased lipid peroxidation","termid":"FYPO:0008397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased lipid peroxidation during stationary phase","termid":"FYPO:0008399"}


id: PR:Q9HDU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDU1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein PB2B2.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.14c","synonyms":[{"name":"Spom972h-SPBPB2B2.14c","type":"exact"}],"termid":"PR:Q9HDU1"}


id: PBO:0034123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_reversal_relationship_with","termid":"PBO:0034123"}


id: MONDO:0030886
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88805],"is_not":false,"summary":null,"term":"MONDO:0030886"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619895","MEDGEN:1811868","UMLS:C5676994"],"synonyms":[{"name":"HPE14","type":"exact"},{"name":"holoprosencephaly 14","type":"exact"}],"termid":"MONDO:0030886","terms_by_termid":{"MONDO:0030886":null},"xrefs":{"Monarch":{"xref_id":"0030886"}}}


id: GO:0015742
data:
  {"annotated_genes":["SJAG_00522","SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73426],"is_not":false,"summary":null,"term":"GO:0015742"},{"annotations":[98435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990550"}]},"cv_name":"biological_process","definition":"The directed movement of alpha-ketoglutarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"alpha-ketoglutarate transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"2-oxoglutarate transport","type":"exact"},{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"related"}],"termid":"GO:0015742","terms_by_termid":{"GO:0015742":null,"GO:1990550":null}}


id: PBO:0113272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in response to nutrients by regulating translation, transcription, ribosome biogenesis, nutrient transport and autophagy; involved in meiosis; indole-3-acetic acid, an ATP-competitive TORC1 inhibitor, accumulates upon entry into stationary phase; malonyl-CoA is a direct ATP-competitive inhibitor of TORC1; TOR1 has a paralog, TOR2, that arose from the whole genome duplication","termid":"PBO:0113272"}


id: MONDO:0003255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceptionally rare, generally benign, granular cell tumor that arises from the mediastinum. All the reported cases were located in the posterior mediastinum.","definition_xrefs":["NCIT:C6601"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mediastinal neural neoplasm","termid":"MONDO:0003098"},{"relation_name":"is_a","term_name":"granular cell tumor","termid":"MONDO:0006235"},{"relation_name":"is_a","term_name":"neoplasm of mediastinum","termid":"MONDO:0021386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinal granular cell myoblastoma","secondary_identifiers":["MEDGEN:235309","DOID:5046","UMLS:C1334656"],"synonyms":[{"name":"granular cell myoblastoma of mediastinum","type":"exact"},{"name":"granular cell myoblastoma of the mediastinum","type":"exact"},{"name":"granular cell neoplasm of mediastinum","type":"exact"},{"name":"granular cell neoplasm of the mediastinum","type":"exact"},{"name":"granular cell tumor of mediastinum","type":"exact"},{"name":"granular cell tumor of the mediastinum","type":"exact"},{"name":"granular cell tumour of mediastinum","type":"exact"},{"name":"granular cell tumour of the mediastinum","type":"exact"},{"name":"mediastinal granular cell myoblastoma","type":"exact"},{"name":"mediastinal granular cell neoplasm","type":"exact"},{"name":"mediastinal granular cell tumor","type":"exact"},{"name":"mediastinal granular cell tumour","type":"exact"},{"name":"mediastinum granular cell tumor","type":"exact"},{"name":"mediastinum granular cell tumour","type":"exact"}],"termid":"MONDO:0003255","xrefs":{"Monarch":{"xref_id":"0003255"}}}


id: GO:0002932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tendon sheath over time, from its formation to the mature structure. A tendon sheath is a layer of membrane around a tendon. It permits the tendon to move.","definition_xrefs":["PMID:20696843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"tendon development","termid":"GO:0035989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tendon sheath development","termid":"GO:0002932"}


id: PBO:0047461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 2","termid":"PBO:0047461"}


id: MONDO:1011702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal pancytopenia, non-human animal","secondary_identifiers":["OMIA:001539"],"termid":"MONDO:1011702","xrefs":{"Monarch":{"xref_id":"1011702"}}}


id: MONDO:0009632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia with hyperopia, retinal degeneration, macrophakia, and dental anomalies","secondary_identifiers":["UMLS:C1968637","MEDGEN:368490","OMIM:251700","MESH:C566884"],"synonyms":[{"name":"microphthalmia with hyperopia, retinal degeneration, macrophakia, and dental anomalies","type":"exact"}],"termid":"MONDO:0009632","xrefs":{"Monarch":{"xref_id":"0009632"}}}


id: PR:Q10306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A citrate synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00965","PANTHER:PTHR11739:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.04","secondary_identifiers":["UniProtKB:Q10306"],"synonyms":[{"name":"Spom972h-CS","type":"exact"}],"termid":"PR:Q10306"}


id: GO:0009906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a blue light photoperiod stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.","definition_xrefs":["GOC:mtg_far_red","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to blue light","termid":"GO:0009637"},{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to photoperiod, blue light","termid":"GO:0009906"}


id: PBO:0003996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C (PKC)-like Pck2","termid":"PBO:0003996"}


id: PBO:0040592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BACH1 intronic transcript 2","termid":"PBO:0040592"}


id: PBO:0064913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 2","termid":"PBO:0064913"}


id: PBO:0030889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_replication","termid":"PBO:0030889"}


id: PBO:0091986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote Wtf23","termid":"PBO:0091986"}


id: PBO:0051571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 16","termid":"PBO:0051571"}


id: PBO:0028883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K36_methylation","termid":"PBO:0028883"}


id: PBO:0041908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalamin binding intrinsic factor","termid":"PBO:0041908"}


id: GO:0106189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to the hydrolysis of a diphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to the hydrolysis of a diphosphate (obsolete GO:0106189)","termid":"GO:0106189"}


id: PBO:0027203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_microtubules","termid":"PBO:0027203"}


id: GO:0070690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) into glycine and acetaldehyde, with acetaldehyde being subsequently converted to acetyl-CoA.","definition_xrefs":["GOC:mah","GOC:bf","MetaCyc:PWY-5436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"threonine catabolic process","termid":"GO:0006567"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0055086","GO:0006520"],"is_obsolete":false,"name":"L-threonine catabolic process to acetyl-CoA","synonyms":[{"name":"L-threonine breakdown to acetyl-CoA","type":"exact"},{"name":"L-threonine catabolism to acetyl-CoA","type":"exact"},{"name":"L-threonine degradation to acetyl-CoA","type":"exact"},{"name":"threonine catabolic process to acetyl-CoA","type":"broad"}],"termid":"GO:0070690"}


id: PBO:0004797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim54 (predicted)","termid":"PBO:0004797"}


id: PATO:0000654
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000654 alcochol value (obsolete PATO:0000654)","termid":"PATO:0000654"}


id: GO:1900206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pronephric nephron tubule development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"pronephric nephron tubule development","termid":"GO:0039020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pronephric nephron tubule development","termid":"GO:1900206"}


id: FYPO:0006134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2-palmitoleoylglycerophosphoinositol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:28667014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular 2-palmitoleoylglycerophosphoinositol level","synonyms":[{"name":"increased 2-palmitoleoylglycerophosphoinositol accumulation","type":"related"},{"name":"increased cellular 2-palmitoleoyl-sn-glycero-3-phospho-D-myo-inositol level during vegetative growth","type":"exact"},{"name":"increased cellular 2-palmitoleoylglycerophosphoinositol level during mitotic cell cycle","type":"related"},{"name":"increased cellular 2-palmitoleoylglycerophosphoinositol level during vegetative growth","type":"exact"}],"termid":"FYPO:0006134"}


id: PBO:0026955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_new_growing_cell_tip","termid":"PBO:0026955"}


id: MONDO:0017625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia","termid":"MONDO:0018100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"familial primary hypomagnesemia with hypocalcuria","secondary_identifiers":["Orphanet:306519","SCTID:711151004"],"termid":"MONDO:0017625","xrefs":{"Monarch":{"xref_id":"0017625"}}}


id: MONDO:0004080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the larynx that arises from the glottic area. It may remain localized for a long period then in late disease stage, it may spread to the opposite true vocal cord, supraglottic and subglottic areas, and the soft tissues of the neck. Hoarseness is the presenting symptom.","definition_xrefs":["NCIT:C8186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glottis carcinoma","termid":"MONDO:0002355"},{"relation_name":"is_a","term_name":"laryngeal squamous cell carcinoma","termid":"MONDO:0005595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"glottis squamous cell carcinoma","secondary_identifiers":["MEDGEN:76096","UMLS:C0280325","DOID:7031"],"synonyms":[{"name":"epidermoid carcinoma of glottis","type":"exact"},{"name":"epidermoid carcinoma of the glottis","type":"exact"},{"name":"glottic epidermoid carcinoma","type":"exact"},{"name":"glottic squamous cell carcinoma","type":"exact"},{"name":"glottis epidermoid carcinoma","type":"exact"},{"name":"glottis squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of glottis","type":"exact"},{"name":"squamous cell carcinoma of the glottis","type":"exact"}],"termid":"MONDO:0004080","xrefs":{"Monarch":{"xref_id":"0004080"}}}


id: PR:Q9UTR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- etd1 gene.","definition_xrefs":["UniProtKB:Q9UTR4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation protein etd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.08","synonyms":[{"name":"Spom972h-etd1","type":"exact"}],"termid":"PR:Q9UTR4"}


id: PBO:0072281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 10","termid":"PBO:0072281"}


id: PBO:0090134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4196 and DUF4211, human CCDC82 ortholog","termid":"PBO:0090134"}


id: PBO:0056917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY2 divergent transcript","termid":"PBO:0056917"}


id: MONDO:0006275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of lung sarcomatoid carcinoma characterized by the presence of mononuclear and multinucleated pleomorphic neoplastic giant cells that lack cohesion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung sarcomatoid carcinoma","termid":"MONDO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung giant cell carcinoma","secondary_identifiers":["ICD9:162.9","MESH:D018286","DOID:5583","SCTID:254631008","EFO:1000332","MEDGEN:83392","UMLS:C0345960","NCIT:C4452","ONCOTREE:GCLC"],"synonyms":[{"name":"GCLC","type":"related"},{"name":"giant cell carcinoma","type":"broad"},{"name":"giant cell carcinoma of lung","type":"exact"},{"name":"giant cell carcinoma of the lung","type":"exact"},{"name":"giant cell lung carcinoma","type":"exact"},{"name":"lung giant cell carcinoma","type":"exact"}],"termid":"MONDO:0006275","xrefs":{"Monarch":{"xref_id":"0006275"}}}


id: FYPO:0007666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the establishment or maintenance of actin cytoskeleton polarity is normal (i.e. indistinguishable from wild type) during conjugation with cellular fusion.","definition_xrefs":["PomBase:mah","PMID:9606213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization phenotype","termid":"FYPO:0000296"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal establishment or maintenance of actin cytoskeleton polarity during mating","synonyms":[{"name":"normal actin cytoskeleton polarisation during conjugation","type":"related"},{"name":"normal actin cytoskeleton polarisation during mating","type":"related"},{"name":"normal actin cytoskeleton polarization during conjugation","type":"related"},{"name":"normal actin cytoskeleton polarization during mating","type":"related"},{"name":"normal actin polarisation during mating","type":"related"},{"name":"normal actin polarisation in shmoo during mating","type":"narrow"},{"name":"normal actin polarization during mating","type":"related"},{"name":"normal actin polarization in shmoo during mating","type":"narrow"},{"name":"normal establishment or maintenance of actin cytoskeleton polarity during conjugation","type":"exact"}],"termid":"FYPO:0007666"}


id: PBO:0067493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 628, pseudogene","termid":"PBO:0067493"}


id: MONDO:0017989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"His bundle tachycardia is a very rare congenital genetic tachyarrhythmia characterized by incessant tachycardia and high morbidity and mortality.","definition_xrefs":["Orphanet:3283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"His bundle tachycardia","secondary_identifiers":["GARD:2706","ICD9:427.89","MEDGEN:21066","SCTID:233901002","icd11.foundation:962827983","NCIT:C111646","MESH:D013613","UMLS:C0039235"],"synonyms":[{"name":"JET","type":"exact"},{"name":"junctional ectopic tachycardia","type":"exact"}],"termid":"MONDO:0017989","xrefs":{"Monarch":{"xref_id":"0017989"}}}


id: MOD:01442
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-valine residue and an L-tyrosine residue by an ether bond to form 3-(O4'-L-tyrosyl)-L-valine.","definition_xrefs":["PubMed:19321420","RESID:AA0490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(O4'-L-tyrosyl)-L-valine","synonyms":[{"name":"(2S)-2-amino-3-(4-[(2S)-2-amino-2-carboxyethyl]phenoxy)-3-methylbutanoic acid","type":"exact"},{"name":"3-(O4'-L-tyrosyl)-L-valine","type":"exact"},{"name":"CROSSLNK 3-(O4'-tyrosyl)-valine (Val-Tyr)","type":"exact"}],"termid":"MOD:01442"}


id: PBO:0083041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta subunit of the translation initiation factor eIF2B; the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a negative regulator of GCN4 expression","termid":"PBO:0083041"}


id: GO:0062160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular anatomical entity which is a network of tubules and vessicles and is part of the contractile vacuole complex. It is involved in the discharge of water externally. One of its functions is osmoregulatory.","definition_xrefs":["PMID:23890380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"contractile vacuole complex","termid":"GO:0062159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spongiome","termid":"GO:0062160"}


id: PBO:0034717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine Igo1","termid":"PBO:0034717"}


id: FYPO:0001707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the incidence of mitotic cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"increased mitotic DNA damage checkpoint activation","synonyms":[{"name":"increased mitotic DNA damage checkpoint activation under non-stressed conditions","type":"narrow"}],"termid":"FYPO:0001707"}


id: GO:0031635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by an opioid binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting opioid receptor signaling pathway","synonyms":[{"name":"inhibition of adenylate cyclase activity by opioid receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by opioid receptor signalling pathway","type":"related"},{"name":"opioid receptor, adenylate cyclase inhibiting pathway","type":"exact"}],"termid":"GO:0031635"}


id: PBO:0013078
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisC","termid":"PBO:0013078"}


id: GO:0035097
data:
  {"annotated_genes":["SJAG_03431","SJAG_00896","SJAG_02119","SJAG_02329","SJAG_00341","SJAG_02768","SJAG_01325","SJAG_00756","SJAG_02170","SJAG_07011","SJAG_01540","SJAG_03680","SJAG_04574","SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115956,96189,120819,98594,112433,119681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[111296,77261,75704,73642,80294,92535,117688,73026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048188"}]},"cv_name":"cellular_component","definition":"A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_00769":null,"SJAG_00896":null,"SJAG_01325":null,"SJAG_01540":null,"SJAG_02119":null,"SJAG_02170":null,"SJAG_02329":null,"SJAG_02768":null,"SJAG_03431":null,"SJAG_03680":null,"SJAG_04574":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005654"],"is_obsolete":false,"name":"histone methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0035097","terms_by_termid":{"GO:0043494":null,"GO:0048188":null}}


id: FYPO:0007979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain interphase microtubule bundles with more microtubules than normal.","definition_xrefs":["PMID:15837798","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"increased number of microtubules per bundle during mitotic interphase","termid":"FYPO:0007979"}


id: PBO:0082911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteinyl-tRNA synthetase; CRS1 has two in-frame start codons resulting in a shorter isoform that is retained in the cytosol and a longer form that is mitochondrial; may interact with ribosomes, based on co-purification experiments; human gene CARS allows growth of the yeast haploid null mutant after sporulation of a heterozygous diploid","termid":"PBO:0082911"}


id: GO:0030903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord development","termid":"GO:0030903"}


id: PR:O14423
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A major centromere autoantigen B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.10c","secondary_identifiers":["UniProtKB:O14423"],"synonyms":[{"name":"CBHP-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC9E9.10c","type":"related"},{"name":"Spom972h-CENPB","type":"exact"},{"name":"cbh","type":"related"}],"termid":"PR:O14423"}


id: MONDO:0008650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Posterior fusion of lumbosacral vertebrae-blepharoptosis syndrome is characterized by congenital ptosis and posterior fusion of the lumbosacral vertebrae. It has been described in a mother and her two daughters.","definition_xrefs":["Orphanet:2064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior fusion of lumbosacral vertebrae-blepharoptosis syndrome","secondary_identifiers":["SCTID:724064004","MEDGEN:348108","UMLS:C1860464","OMIM:192800","GARD:2276","MESH:C536344"],"synonyms":[{"name":"Faulk Epstein Jones syndrome","type":"related"},{"name":"Faulk-Epstein-Jones syndrome","type":"exact"},{"name":"congenital ptosis and posterior fusion of lumbosacral vertebrae","type":"related"},{"name":"familial posterior lumbosacral vertebral fusion and eyelid ptosis","type":"related"},{"name":"vertebral fusion posterior lumbosacral blepharoptosis","type":"related"},{"name":"vertebral fusion, POSTERIOR lumbosacral, with blepharoptosis","type":"related"}],"termid":"MONDO:0008650","xrefs":{"Monarch":{"xref_id":"0008650"}}}


id: PBO:0055984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat transmembrane neuronal 2","termid":"PBO:0055984"}


id: PR:P48009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septin-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.11c","secondary_identifiers":["UniProtKB:P48009"],"synonyms":[{"name":"SPAC9G1.11c","type":"related"},{"name":"Spom972h-SEPT4","type":"exact"}],"termid":"PR:P48009"}


id: GO:0044862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein out of a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"is_a","term_name":"protein transport within plasma membrane","termid":"GO:0099632"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein transport out of plasma membrane raft","termid":"GO:0044862"}


id: PBO:0072923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 4","termid":"PBO:0072923"}


id: SO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An MNV that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"substitution_artifact","termid":"SO:0002176"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNV_artifact","synonyms":[{"name":"MNV artifact","type":"exact"}],"termid":"SO:0002179"}


id: PBO:0089789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk16","termid":"PBO:0089789"}


id: PBO:0017987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Haemolysin-III family plasma membrane receptor implicated in zinc ion homeostasis Izh2 (predicted)","termid":"PBO:0017987"}


id: MONDO:0016620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetically and clinically heterogeneous inherited disorder characterized by digital clubbing and osteoarthropathy, with variable features of pachydermia, delayed closure of the fontanels, and congenital heart disease. There are two types of PHO: pachydermoperiostosis and cranio-osteoarthropathy.","definition_xrefs":["Orphanet:248095"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"excluded_subClassOf","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypertrophic osteoarthropathy","secondary_identifiers":["NANDO:2201004","MEDGEN:18210","UMLS:C0029411","OMIMPS:259100","DOID:14283","NCIT:C85023","SCTID:88220006","GARD:20667","icd11.foundation:792225761","NANDO:1200642","MESH:D010004","NANDO:2100288","Orphanet:2796","MedDRA:10051686"],"synonyms":[{"name":"PDP","type":"exact"},{"name":"PHO","type":"exact"},{"name":"PHOAR1","type":"related"},{"name":"Touraine Solente Gole syndrome","type":"exact"},{"name":"Touraine-Solente-Gole syndrome","type":"exact"},{"name":"hypertrophic osteoarthropathy, primary","type":"exact"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, 1","type":"related"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, type 1","type":"exact"},{"name":"hypertropic osteoarthropathy, primary","type":"exact"},{"name":"idiopathic hypertrophic osteoarthropathy","type":"exact"},{"name":"pachydermoperiostosis","type":"exact"},{"name":"pachydermoperiostosis of nail","type":"exact"},{"name":"pachydermoperiostosis of nail [ambiguous]","type":"exact"},{"name":"pachydermoperiostosis syndrome","type":"exact"}],"termid":"MONDO:0016620","xrefs":{"Monarch":{"xref_id":"0016620"}}}


id: PBO:0113363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to the Rap1p C-terminus; inhibits MRX-dependent Tel1p activity by acting directly on Rad50p and discharging its activated ATP-bound state, thereby rendering the MRX complex incompetent for Tel1p activation; acts synergistically with Rif1p to help control telomere length, establish telomeric silencing; deletion results in telomere elongation; RIF2 has paralog ORC4 that arose from the whole genome duplication","termid":"PBO:0113363"}


id: PBO:0080210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestigial like family member 4","termid":"PBO:0080210"}


id: PBO:0003724
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.2.13","termid":"PBO:0003724"}


id: MONDO:0010453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 92","secondary_identifiers":["UMLS:C1845144","GARD:22691","MEDGEN:335109","MESH:C564483","DOID:0112032","OMIM:300851"],"synonyms":[{"name":"MRX92","type":"exact"},{"name":"intellectual disability, X-linked 92","type":"exact"},{"name":"mental retardation, X-linked 92","type":"related"},{"name":"mental retardation, X-linked 92, X-linked recessive","type":"exact"}],"termid":"MONDO:0010453","xrefs":{"Monarch":{"xref_id":"0010453"}}}


id: MONDO:0000879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Candidiasis of the skin manifested as eczema-like lesions of the interdigital spaces, perleche, or chronic paronychia. (Dorland, 27th ed)","definition_xrefs":["MESH:D002179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"},{"relation_name":"is_a","term_name":"tinea infection","termid":"MONDO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous candidiasis","secondary_identifiers":["DOID:0080161","UMLS:C0006846","MEDGEN:2427"],"synonyms":[{"name":"zone of skin candidiasis","type":"exact"}],"termid":"MONDO:0000879","xrefs":{"Monarch":{"xref_id":"0000879"}}}


id: PBO:0083785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in regulation of transcription; removes Spt15p (TBP) from DNA via its C-terminal ATPase activity; may have a role in ensuring that soluble TBP is available to bind TATA-less promoters; forms a complex with TBP that binds TATA DNA with high affinity but with altered specificity; the Mot1p-Spt15p-DNA ternary complex contains unbent DNA; coregulates transcription with Spt16p through assembly of preinitiation complex and organization of nucleosomes","termid":"PBO:0083785"}


id: PBO:0028595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0028595"}


id: MONDO:0019356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urogenital tract malformation","secondary_identifiers":["Orphanet:83001","ICD10CM:Q60-Q64","GARD:19029"],"termid":"MONDO:0019356","xrefs":{"Monarch":{"xref_id":"0019356"}}}


id: PBO:0055614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3053","termid":"PBO:0055614"}


id: PBO:0047654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase family member 6 (inactive)","termid":"PBO:0047654"}


id: PBO:0066586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho related BTB domain containing 1","termid":"PBO:0066586"}


id: PBO:0054221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1602","termid":"PBO:0054221"}


id: MONDO:0009917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Generalized pseudohypoaldosteronism type 1 (generalized PHA1) is a severe form of primary mineralocorticoid resistance with systemic involvement and salt loss in multiple organs.","definition_xrefs":["Orphanet:171876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 1","termid":"MONDO:0019161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism, type IB1, autosomal recessive","secondary_identifiers":["MEDGEN:1823950","GARD:4552","OMIM:264350","UMLS:C5774176"],"synonyms":[{"name":"PHA I, autosomal recessive","type":"related"},{"name":"PHA1B","type":"exact"},{"name":"autosomal recessive PHA 1","type":"exact"},{"name":"autosomal recessive pseudohypoaldosteronism type 1","type":"exact"},{"name":"generalised PHA1","type":"exact"},{"name":"generalised pseudohypoaldosteronism type 1","type":"exact"},{"name":"generalized PHA1","type":"exact"},{"name":"generalized pseudohypoaldosteronism type 1","type":"exact"},{"name":"pseudohypoaldosteronism type 1 autosomal recessive","type":"related"},{"name":"pseudohypoaldosteronism type 1, recessive","type":"related"},{"name":"pseudohypoaldosteronism, type I, autosomal recessive","type":"related"}],"termid":"MONDO:0009917","xrefs":{"Monarch":{"xref_id":"0009917"}}}


id: PATO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to shrink or contract.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractility","termid":"PATO:0001579"}


id: PBO:0056424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCO like","termid":"PBO:0056424"}


id: MONDO:1011188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scoliosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scoliosis, non-human animal","termid":"MONDO:1010302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, horse","secondary_identifiers":["OMIA:000891-9796"],"termid":"MONDO:1011188","xrefs":{"Monarch":{"xref_id":"1011188"}}}


id: GO:0015476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of hemaglutinin from the periplasm to the external milieu; the hemaglutinin and the porin are the N- and C-terminal regions of the same protein, respectively.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete hemaglutinin autotransporter activity (obsolete GO:0015476)","termid":"GO:0015476"}


id: MONDO:0009016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The deposition of calcium on the cornea, resulting in pain and decreased visual acuity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal degeneration","termid":"MONDO:0001515"},{"relation_name":"is_a","term_name":"keratopathy","termid":"MONDO:0002261"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"band keratopathy","secondary_identifiers":["DOID:11164","MESH:C562399","MEDGEN:56354","SCTID:35055000","UMLS:C0155120","NCIT:C118765","OMIM:217500","ICD9:371.43","icd11.foundation:184627034"],"synonyms":[{"name":"band keratopathy","type":"exact"},{"name":"band-shaped keratopathy","type":"exact"},{"name":"corneal dystrophy, band-SHAPED","type":"related"}],"termid":"MONDO:0009016","xrefs":{"Monarch":{"xref_id":"0009016"}}}


id: PBO:0043948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta A4","termid":"PBO:0043948"}


id: PATO:0000147
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000147 absolute temperature (obsolete PATO:0000147)","termid":"PATO:0000147"}


id: GO:0098886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modifies the structure of a dendritic spine.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification of postsynaptic structure","termid":"GO:0099010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modification of dendritic spine","termid":"GO:0098886"}


id: GO:0003059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine into the bloodstream or released from nerve endings modulates the force of heart muscle contraction.","definition_xrefs":["GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by chemical signal","termid":"GO:0003099"},{"relation_name":"part_of","term_name":"positive regulation of the force of heart contraction by epinephrine-norepinephrine","termid":"GO:0001997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by epinephrine","synonyms":[{"name":"adrenaline cardiac inotropy","type":"exact"},{"name":"adrenaline regulation of the strength of heart muscle contraction","type":"exact"},{"name":"epinephrine cardiac inotropy","type":"exact"},{"name":"increased force of heart contraction by epinephrine","type":"exact"},{"name":"positive regulation of heart contraction by adrenaline","type":"related"},{"name":"positive regulation of heart contraction by epinephrine","type":"related"}],"termid":"GO:0003059"}


id: PBO:0063424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 4C","termid":"PBO:0063424"}


id: GO:0031093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the platelet alpha granule.","definition_xrefs":["PMID:8467233","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"platelet alpha granule","termid":"GO:0031091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"platelet alpha granule lumen","synonyms":[{"name":"platelet alpha-granule lumen","type":"exact"}],"termid":"GO:0031093"}


id: PBO:0075759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 1 pseudogene 1","termid":"PBO:0075759"}


id: PBO:0057493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 611","termid":"PBO:0057493"}


id: MONDO:0018893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cobb syndrome is defined by the association of vascular cutaneous (venous or arteriovenous), muscular (arteriovenous), osseous (arteriovenous) and medullary (arteriovenous) lesions at the same metamere or spinal segment. This segmental distribution may involve one or many of the 31 metameres present in humans. Only 16% of the medullary lesions are multiple and have a clearly metameric distribution.","definition_xrefs":["Orphanet:53721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriovenous hemangioma/malformation","termid":"MONDO:0001256"},{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Cobb syndrome","secondary_identifiers":["SCTID:254774003","MedDRA:10068841","GARD:11892","icd11.foundation:1451924695","MEDGEN:91079","UMLS:C0346068","ICD9:239.2","NCIT:C4485"],"synonyms":[{"name":"Cobb's syndrome","type":"exact"},{"name":"SAMS 1-31","type":"exact"},{"name":"cutaneomeningospinal angiomatosis","type":"exact"},{"name":"spinal arteriovenous metameric syndrome","type":"exact"}],"termid":"MONDO:0018893","xrefs":{"Monarch":{"xref_id":"0018893"}}}


id: PBO:0029241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_centromere_outer_repeat","termid":"PBO:0029241"}


id: PBO:0059118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monooxygenase DBH like 2, pseudogene","termid":"PBO:0059118"}


id: MONDO:0859529
data:
  {"annotated_genes":["SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88400],"is_not":false,"summary":null,"term":"MONDO:0859529"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis 27, juvenile","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081381","UMLS:C5830359","OMIM:620285","MEDGEN:1840995"],"termid":"MONDO:0859529","terms_by_termid":{"MONDO:0859529":null},"xrefs":{"Monarch":{"xref_id":"0859529"}}}


id: GO:0045930
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  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id: PBO:0040689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain amino acid transaminase 1","termid":"PBO:0040689"}


id: GO:1990395
data:
  {"annotated_genes":["SJAG_01805","SJAG_01760","SJAG_02529","SJAG_04901","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95643,117105],"is_not":false,"summary":null,"term":"GO:1990395"},{"annotations":[115907,98745,93130],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the meiotic spindle pole body.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body organization","termid":"GO:0051300"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle organization","termid":"GO:0000212"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01760":null,"SJAG_01805":null,"SJAG_02529":null,"SJAG_03915":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"meiotic spindle pole body organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990395","terms_by_termid":{"GO:1902441":null,"GO:1990395":null}}


id: FYPO:0000567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of septum assembly","synonyms":[{"name":"decreased division septum formation involved in mitotic cytokinesis","type":"related"},{"name":"decreased duration of division septum assembly","type":"exact"},{"name":"decreased duration of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"decreased duration of septation","type":"broad"},{"name":"decreased duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"decreased duration of septum assembly during vegetative growth","type":"exact"},{"name":"decreased septation","type":"related"},{"name":"decreased septum formation","type":"related"},{"name":"reduced duration of septum assembly","type":"exact"},{"name":"septum formation: decreased","type":"broad"}],"termid":"FYPO:0000567"}


id: PBO:0073024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCP2D1 antisense RNA 1","termid":"PBO:0073024"}


id: GO:2000111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"is_a","term_name":"regulation of macrophage apoptotic process","termid":"GO:2000109"},{"relation_name":"positively_regulates","term_name":"macrophage apoptotic process","termid":"GO:0071888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage apoptotic process","synonyms":[{"name":"positive regulation of AICD","type":"related"},{"name":"positive regulation of activation-induced cell death","type":"related"},{"name":"positive regulation of macrophage apoptosis","type":"narrow"}],"termid":"GO:2000111"}


id: GO:0033925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of the N,N'-diacetylchitobiosyl unit in high-mannose glycopeptides and glycoproteins containing the -[Man(GlcNAc)2]Asn-structure. One N-acetyl-D-glucosamine residue remains attached to the protein; the rest of the oligosaccharide is released intact.","definition_xrefs":["EC:3.2.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity","secondary_identifiers":["Reactome:R-HSA-8853379","MetaCyc:3.2.1.96-RXN"],"synonyms":[{"name":"N,N'-diacetylchitobiosyl beta-N-acetylglucosaminidase activity","type":"related"},{"name":"di-N-acetylchitobiosyl beta-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-N-acetyl-beta-D-glucosaminidase activity","type":"related"},{"name":"endo-N-acetyl-beta-glucosaminidase activity","type":"related"},{"name":"endo-beta-(1->4)-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase D activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase F activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase H activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase L activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-beta-acetylglucosaminidase activity","type":"related"},{"name":"endoglycosidase H activity","type":"related"},{"name":"endoglycosidase S activity","type":"related"},{"name":"glycopeptide-D-mannosyl-4-N-(N-acetyl-D-glucosaminyl)2-asparagine 1,4-N-acetyl-beta-glucosaminohydrolase activity","type":"related"},{"name":"glycopeptide-D-mannosyl-N4-(N-acetyl-D-glucosaminyl)2-asparagine 1,4-N-acetyl-beta-glucosaminohydrolase activity","type":"related"},{"name":"mannosyl-glycoprotein 1,4-N-acetamidodeoxy-beta-D-glycohydrolase activity","type":"related"},{"name":"mannosyl-glycoprotein endo-beta-N-acetylglucosamidase activity","type":"related"}],"termid":"GO:0033925"}


id: PBO:0079966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 4","termid":"PBO:0079966"}


id: MONDO:0015738
data:
  {"annotated_genes":["SJAG_04887","SJAG_03145","SJAG_03379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[86979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"},{"annotations":[88536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"}]},"cv_name":"mondo","definition":"Childhood onset nemaline myopathy, or mild nemaline myopathy is a type of nemaline myopathy (NM) characterized by distal muscle weakness, and sometimes slowness of muscle contraction.","definition_xrefs":["Orphanet:171439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of alpha-actin","termid":"MONDO:0016193"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of nebulin","termid":"MONDO:0016194"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"},{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03145":null,"SJAG_03379":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"childhood-onset nemaline myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:7171","MEDGEN:154265","UMLS:C0546125"],"synonyms":[{"name":"mild nemaline myopathy","type":"exact"}],"termid":"MONDO:0015738","terms_by_termid":{"MONDO:0008070":null,"MONDO:0009725":null,"MONDO:0012239":null},"xrefs":{"Monarch":{"xref_id":"0015738"}}}


id: PBO:0084390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity zinc transporter of the plasma membrane; transcription is induced under low-zinc conditions by the Zap1p transcription factor","termid":"PBO:0084390"}


id: PBO:0080726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT1 interacting protein","termid":"PBO:0080726"}


id: PBO:0081865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 804A","termid":"PBO:0081865"}


id: PBO:0039795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAP1 antisense RNA 2","termid":"PBO:0039795"}


id: PBO:0081577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF503 antisense RNA 1","termid":"PBO:0081577"}


id: PBO:0045922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 14 pseudogene 1","termid":"PBO:0045922"}


id: MONDO:0013538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alpha-2-macroglobulin deficiency (obsolete MONDO:0013538)","secondary_identifiers":["MESH:C566304","OMIM:614036"],"synonyms":[{"name":"A2MD","type":"related"},{"name":"ALPHA-2-macroglobulin deficiency","type":"related"},{"name":"alpha-2-macroglobulin deficiency","type":"exact"}],"termid":"MONDO:0013538","xrefs":{"Monarch":{"xref_id":"0013538"}}}


id: MOD:00761
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with one hexose sugar group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"monohexosylated (Hex1)","synonyms":[{"name":"Hex1","type":"exact"}],"termid":"MOD:00761"}


id: GO:0021561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the facial nerve over time, from its formation to the mature structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives off nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","ISBN:0838580343","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nerve development","synonyms":[{"name":"CN VII development","type":"related"},{"name":"cranial nerve 7 development","type":"exact"},{"name":"cranial nerve VII development","type":"exact"}],"termid":"GO:0021561"}


id: MONDO:0035009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"isolated mesenteric vein thrombosis","secondary_identifiers":["GARD:22339","icd11.foundation:213868120","Orphanet:583861"],"termid":"MONDO:0035009","xrefs":{"Monarch":{"xref_id":"0035009"}}}


id: PBO:0059685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 51","termid":"PBO:0059685"}


id: MONDO:1012215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent right aortic arch, non-human animal","termid":"MONDO:1011644"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent right aortic arch, horse","secondary_identifiers":["OMIA:000794-9796"],"termid":"MONDO:1012215","xrefs":{"Monarch":{"xref_id":"1012215"}}}


id: GO:0004818
data:
  {"annotated_genes":["SJAG_03277","SJAG_03071"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72023,74621],"is_not":false,"summary":null,"term":"GO:0004818"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu).","definition_xrefs":["EC:6.1.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03071":null,"SJAG_03277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0140098","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"glutamate-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-380216","RHEA:23540","MetaCyc:GLURS-RXN","Reactome:R-HSA-379861"],"synonyms":[{"name":"L-glutamate:tRNAGlu ligase (AMP-forming) activity","type":"related"},{"name":"glutamate-tRNA synthetase activity","type":"related"},{"name":"glutamic acid translase activity","type":"related"},{"name":"glutamyl-tRNA synthetase activity","type":"exact"},{"name":"glutamyl-transfer RNA synthetase activity","type":"related"},{"name":"glutamyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"glutamyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004818","terms_by_termid":{"GO:0004818":null}}


id: PBO:0060352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVIIIB","termid":"PBO:0060352"}


id: FYPO:0002310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GMP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal GMP binding","termid":"FYPO:0002310"}


id: GO:0021598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the abducens nerve is generated and organized. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","ISBN:0838580343","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"abducens nerve development","termid":"GO:0021560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve morphogenesis","synonyms":[{"name":"CN VI development","type":"related"}],"termid":"GO:0021598"}


id: GO:0015259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate channel activity (obsolete GO:0015259)","synonyms":[{"name":"glutamate channel activity","type":"exact"}],"termid":"GO:0015259"}


id: PBO:0063734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylated adaptor for RNA export","termid":"PBO:0063734"}


id: PBO:0086588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; exhibits a two-hybrid interaction with Jsn1p in a large-scale analysis; YLR156W has a paralog, YLR159W, that arose from a segmental duplication","termid":"PBO:0086588"}


id: PBO:0012523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_morphogenesis_of","termid":"PBO:0012523"}


id: FYPO:0007163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule-based movement is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}


id: PBO:0075238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX9 antisense RNA 1","termid":"PBO:0075238"}


id: PR:O14057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04365","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.03c","secondary_identifiers":["UniProtKB:O14057"],"synonyms":[{"name":"GAH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Guanase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GDA","type":"exact"},{"name":"guanine aminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"guanine aminohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14057"}


id: MONDO:0018088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial Mediterranean fever (FMF) is an autoinflammatory disorder characterized by recurrent short episodes of fever and serositis resulting in pain in the abdomen, chest, joints and muscles.","definition_xrefs":["Orphanet:342"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial Mediterranean fever","secondary_identifiers":["SCTID:12579009","MESH:D010505","icd11.foundation:1373335705","DOID:2987","GARD:6421","ICD9:277.31","MedDRA:10016207","NANDO:1200863","NANDO:2200431","NORD:1130","MEDGEN:45811","NCIT:C84707","UMLS:C0031069"],"synonyms":[{"name":"FMF","type":"exact"},{"name":"Fiebre mediterránea familiar","type":"exact"},{"name":"benign paroxysmal peritonitis","type":"exact"},{"name":"benign recurrent polyserositis","type":"exact"},{"name":"familial paroxysmal polyserositis","type":"exact"},{"name":"periodic disease","type":"exact"}],"termid":"MONDO:0018088","xrefs":{"Monarch":{"xref_id":"0018088"}}}


id: PBO:0064411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 6B (pseudogene)","termid":"PBO:0064411"}


id: MOD:00017
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to a glycine.","definition_xrefs":["ChEBI:29947","DeltaMass:0","PubMed:1310545","PubMed:6692818","RESID:AA0008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine residue","synonyms":[{"name":"Gly","type":"exact"},{"name":"aminoacetic acid","type":"exact"},{"name":"aminoethanoic acid","type":"exact"},{"name":"azanylethanoic acid","type":"exact"},{"name":"glycine","type":"exact"},{"name":"glycocoll","type":"exact"}],"termid":"MOD:00017"}


id: PBO:0072526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 55","termid":"PBO:0072526"}


id: PBO:0079779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A complex locus","termid":"PBO:0079779"}


id: GO:0042554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways.","definition_xrefs":["GOC:jl","PMID:12359750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superoxide metabolic process","termid":"GO:0006801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superoxide anion generation","synonyms":[{"name":"superoxide release","type":"exact"}],"termid":"GO:0042554"}


id: FYPO:0006475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short mitotic spindle assembles, and may begin elongation, but does not elongate normally or completely, and eventually collapses. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:15147872","PMID:25375240","PomBase:mah","PMID:27697865","PMID:23885124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unstable mitotic spindle","termid":"FYPO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"mitotic spindle collapse","synonyms":[{"name":"broken mitotic spindle","type":"related"},{"name":"mitotic spindle breakage","type":"exact"},{"name":"mitotic spindle collapse during vegetative growth","type":"exact"},{"name":"spindle collapse during mitosis","type":"exact"},{"name":"spindle collapse during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006475"}


id: GO:0106326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-threonyl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->6)]-N-acetyl-alpha-D-galactosaminyl]-L-threonyl-[protein] + H+ + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylgalactosaminyl-O-glycosyl-threonyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (obsolete GO:0106326)","termid":"GO:0106326"}


id: MONDO:0019226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of glucose transport.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"is_a","term_name":"carbohydrate transport disease","termid":"MONDO:0045015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glucose transport disorder","secondary_identifiers":["MEDGEN:1842427","GARD:18957","UMLS:C5389835","Orphanet:79178"],"synonyms":[{"name":"inborn error of glucose transport","type":"exact"},{"name":"rare inborn error of glucose transport","type":"related"}],"termid":"MONDO:0019226","xrefs":{"Monarch":{"xref_id":"0019226"}}}


id: GO:0052244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within a second organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in other organism involved in symbiotic interaction (obsolete GO:0052244)","synonyms":[{"name":"negative energy taxis in other organism during symbiotic interaction","type":"related"},{"name":"negative energy taxis within other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052244"}


id: GO:0030522
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a receptor located within a cell.","definition_xrefs":["GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intracellular receptor signaling pathway","references_by_uniquename":{"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-9024446"],"synonyms":[{"name":"intracellular receptor mediated signaling pathway","type":"exact"},{"name":"intracellular receptor-mediated signaling pathway","type":"exact"},{"name":"intracellular receptor-mediated signalling pathway","type":"exact"}],"termid":"GO:0030522","terms_by_termid":{"GO:0009785":null}}


id: PBO:0041393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 putative open reading frame 64","termid":"PBO:0041393"}


id: PBO:0049695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan and proteoglycan link protein 1","termid":"PBO:0049695"}


id: MONDO:0021577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinal neural neoplasm","termid":"MONDO:0003098"},{"relation_name":"is_a","term_name":"mediastinal cancer","termid":"MONDO:0005843"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mediastinal neural neoplasm","secondary_identifiers":["MEDGEN:578863","SCTID:278044006","UMLS:C0349665"],"synonyms":[{"name":"malignant neuroma of mediastinum","type":"exact"}],"termid":"MONDO:0021577","xrefs":{"Monarch":{"xref_id":"0021577"}}}


id: PBO:0089756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H dehydrogenase (quinone)","termid":"PBO:0089756"}


id: GO:0052053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host enzyme activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host catalytic activity (obsolete GO:0052053)","synonyms":[{"name":"down regulation by symbiont of host enzyme activity","type":"exact"},{"name":"down-regulation by symbiont of host enzyme activity","type":"exact"},{"name":"downregulation by symbiont of host enzyme activity","type":"exact"},{"name":"inhibition by symbiont of host enzyme activity","type":"narrow"},{"name":"inhibition of host enzyme activity","type":"exact"},{"name":"negative regulation by symbiont of host enzyme activity","type":"exact"},{"name":"negative regulation by symbiont of host molecular function","type":"broad"}],"termid":"GO:0052053"}


id: GO:1990833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the removal of clathrin from vesicle membranes, coupled to the hydrolysis of ATP.","definition_xrefs":["PMID:6146630","PMID:8363588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"clathrin-uncoating ATPase activity","termid":"GO:1990833"}


id: PBO:0055926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A14, pseudogene","termid":"PBO:0055926"}


id: PBO:0086957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of peroxisome abundance; peroxisomal membrane protein, remote homolog to several curvature-generating human proteins; functionally interacts with vesicle-budding-inducing ADP-ribosylation factor Arf1p","termid":"PBO:0086957"}


id: PR:O13938
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.04 gene.","definition_xrefs":["UniProtKB:O13938","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0658 Golgi apparatus membrane protein C23H3.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.04","synonyms":[{"name":"Spom972h-SPAC23H3.04","type":"exact"}],"termid":"PR:O13938"}


id: MONDO:1010240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Horner syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy, non-human animal","termid":"MONDO:1010239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Horner syndrome, non-human animal","secondary_identifiers":["OMIA:001197"],"termid":"MONDO:1010240","xrefs":{"Monarch":{"xref_id":"1010240"}}}


id: GO:0034026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + an L-amino acid + an L-amino acid = ADP + phosphate + L-aminoacyl-L-amino acid.","definition_xrefs":["EC:6.3.2.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-amino-acid alpha-ligase activity","secondary_identifiers":["MetaCyc:RXN-16296","RHEA:44332"],"synonyms":[{"name":"L-amino acid alpha-ligase activity","type":"exact"},{"name":"L-amino acid ligase activity","type":"exact"},{"name":"YwfE","type":"related"},{"name":"bacilysin synthetase activity","type":"exact"}],"termid":"GO:0034026"}


id: PBO:0030116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_zinc_level","termid":"PBO:0030116"}


id: PBO:0027098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_at_rDNA_replication_origins","termid":"PBO:0027098"}


id: GO:0052560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont immune response (obsolete GO:0052560)","synonyms":[{"name":"induction by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052560"}


id: FYPO:0003678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of doxorubicin measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular doxorubicin level","synonyms":[{"name":"increased cellular doxorubicin level during mitotic cell cycle","type":"related"},{"name":"increased cellular doxorubicin level during vegetative growth","type":"exact"},{"name":"increased doxorubicin accumulation","type":"related"}],"termid":"FYPO:0003678"}


id: PBO:0044779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExD/H-box 60 like","termid":"PBO:0044779"}


id: GO:0160257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the granzyme K pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes.","definition_xrefs":["PMID:39814882","PMID:39914456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation, GZMK pathway","synonyms":[{"name":"complement activation, granzyme K pathway","type":"exact"}],"termid":"GO:0160257"}


id: PBO:0049805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1","termid":"PBO:0049805"}


id: PBO:0108947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 4","termid":"PBO:0108947"}


id: PBO:0045324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 4","termid":"PBO:0045324"}


id: PBO:0059789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 15","termid":"PBO:0059789"}


id: GO:0005991
data:
  {"annotated_genes":["SJAG_01862","SJAG_01646","SJAG_00182","SJAG_01427","SJAG_01531","SJAG_00129","SJAG_01209","SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70764,62500,110847,69369,69955,63247,65532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"},{"annotations":[73220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["GOC:jl","ISBN:0028623819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"trehalose metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mycose metabolic process","type":"exact"},{"name":"mycose metabolism","type":"exact"},{"name":"mykose metabolic process","type":"exact"},{"name":"mykose metabolism","type":"exact"},{"name":"trehalose metabolism","type":"exact"}],"termid":"GO:0005991","terms_by_termid":{"GO:0005992":null,"GO:0005993":null}}


id: GO:0009334
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Enzyme complex consisting of four proteins: the two subunits of the hydroxylase component (hcaE and hcaF), a ferredoxin (hcaC) and a ferredoxin reductase (hcaD). Converts 3-phenylpropionic acid (PP) into cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol).","definition_xrefs":["GOC:jl","MetaCyc:HCAMULTI-CPLX","PMID:9603882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"3-phenylpropionate dioxygenase complex","termid":"GO:0009334"}


id: MONDO:0001341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dysgammaglobulinemia characterized by low or undetectable serum levels of immunoglobulin class A (IgA). It is the most common primary antibody deficiency. It may be inherited or the reversible sequela of infection or certain drugs. It may be caused by decreased or inefficient class-switching from progenitor B cells without any corresponding decreases in the other isotypes. Though affected persons may be asymptomatic, low levels of IgA will reduce the immune system's ability to combat infection where IgA is normally secreted, at mucosal surfaces. Selective IgA deficiency is seen in greater proportion among patients with autoimmune disorders.","definition_xrefs":["NCIT:C26964"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"B cell deficiency","termid":"MONDO:0002211"},{"relation_name":"is_a","term_name":"dysgammaglobulinemia","termid":"MONDO:0001342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"selective IgA deficiency disease","secondary_identifiers":["Orphanet:69127","SCTID:29260007","NANDO:1200347","DOID:11701","MEDGEN:883982","UMLS:C4049006","EFO:1001929","DOID:0060025","MESH:D017098","NANDO:2200720"],"synonyms":[{"name":"IgA deficiencies","type":"related"},{"name":"IgA deficiency","type":"exact"},{"name":"SIgAD","type":"exact"},{"name":"deficiencies, IgA","type":"related"},{"name":"deficiency, IgA","type":"related"},{"name":"gamma-A-globulin deficiency","type":"exact"},{"name":"immunoglobulin A deficiency","type":"exact"},{"name":"immunoglobulin alpha deficiency","type":"related"},{"name":"selective IgA immunodeficiency","type":"exact"},{"name":"selective immunoglobulin A deficiency","type":"exact"}],"termid":"MONDO:0001341","xrefs":{"Monarch":{"xref_id":"0001341"}}}


id: MONDO:0018974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus is a group of chronic autoimmune skin diseases characterized by blisters formation on the outer layer of the skin and the mucous membranes. Three clinical forms have been characterized, of which paraneoplastic pemphigus is extremely rare.","definition_xrefs":["Orphanet:63455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"},{"relation_name":"is_a","term_name":"paraneoplastic cutaneous syndrome","termid":"MONDO:0700266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"paraneoplastic pemphigus","secondary_identifiers":["EFO:0008602","MedDRA:10057056","DOID:0080852","UMLS:C1112570","icd11.foundation:104197957","MEDGEN:798302","ICD10CM:L10.81","GARD:18858","NANDO:1200231"],"termid":"MONDO:0018974","xrefs":{"Monarch":{"xref_id":"0018974"}}}


id: GO:0003284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the septum primum over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum development","termid":"GO:0003283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"septum primum development","termid":"GO:0003284"}


id: PBO:0038344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-co-occurs","termid":"PBO:0038344"}


id: FYPO:0003005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that has a larger diameter and volume than normal and forms branches, and does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with branched, elongated germ tube","termid":"FYPO:0002515"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with swollen elongated germ tube","termid":"FYPO:0002911"},{"relation_name":"is_a","term_name":"inviable branched, swollen, elongated vegetative cell","termid":"FYPO:0004494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with swollen, branched, elongated germ tube","synonyms":[{"name":"inviable after spore germination with elongated swollen branched germ tube","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen, branched, elongated cell","type":"exact"},{"name":"inviable following spore germination with swollen, branched, elongated germ tube","type":"exact"},{"name":"inviable germinated spore with swollen, branched, elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with swollen, branched, elongated germ tube","type":"exact"}],"termid":"FYPO:0003005"}


id: PR:O74445
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit S10B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23073:SF10","OMA:SCHPO04299","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease subunit rpt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.16","secondary_identifiers":["UniProtKB:O74445"],"synonyms":[{"name":"Spom972h-PSMC6","type":"exact"}],"termid":"PR:O74445"}


id: GO:0003071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Renal process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure.","definition_xrefs":["GOC:dph","GOC:mtg_cardio","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system process involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"renal control of blood pressure","type":"exact"},{"name":"renal regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0003071"}


id: MONDO:1012299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"displaced abomasum, non-human animal","termid":"MONDO:1011663"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced abomasum, cattle","secondary_identifiers":["OMIA:001119-9913"],"termid":"MONDO:1012299","xrefs":{"Monarch":{"xref_id":"1012299"}}}


id: GO:0008518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Folate derivative (out) + anion (in) = folate derivative (in) + anion (out). The Reduced Folate Carrier (RCF(SLC19A1) acts by an antiport mechanism. RCF carries several folate derivatives: MTX, PMX, ratitrexed, pralatrexate, 5-methyl THF, and 5-formyl THF.","definition_xrefs":["PMID:24745983","TC:2.A.48","GOC:mtg_transport","PMID:21568705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"folate:monoatomic anion antiporter activity","synonyms":[{"name":"folate:anion antiporter activity","type":"broad"},{"name":"reduced folate carrier activity","type":"related"},{"name":"reduced folate transmembrane transporter activity","type":"related"},{"name":"reduced folate transporter","type":"related"}],"termid":"GO:0008518"}


id: MONDO:0032684
data:
  {"annotated_genes":["SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87884],"is_not":false,"summary":null,"term":"MONDO:0032684"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02908":null},"genotype_count":0,"is_obsolete":false,"name":"intrauterine growth retardation, metaphyseal dysplasia, adrenal hypoplasia congenita, genital anomalies, and immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684464","OMIM:618336","UMLS:C5193036"],"synonyms":[{"name":"IMAGE-I syndrome","type":"exact"},{"name":"IMAGEI","type":"related"},{"name":"INTRAUTERINE GROWTH RETARDATION, METAPHYSEAL DYSPLASIA, ADRENAL HYPOPLASIA CONGENITA, GENITAL ANOMALIES, AND IMMUNODEFICIENCY","type":"related"},{"name":"Imagei Syndrome","type":"related"}],"termid":"MONDO:0032684","terms_by_termid":{"MONDO:0032684":null},"xrefs":{"Monarch":{"xref_id":"0032684"}}}


id: MONDO:0015941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epiphyseal dysplasia-hearing loss-dysmorphism syndrome is a rare multiple congenital anomalies/dysmorphic syndrome characterized by developmental delay, intellectual disability, short stature, sensorineural hearing impairment, facial dysmorphism (incl. epicanthus, broad, depressed nasal bridge, broad, fleshy nasal tip, mildly anteverted nares, deep nasolabial folds, broad mouth with thin upper lip) and skeletal anomalies (incl. abnormally placed thumbs, brachydactyly, scoliosis, dysplastic carpal bones). Patients also present severe behavior disturbances (aggression, hyperactivity), as well as hypopigmented skin lesions and hypoplastic digital patterns. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:1825"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphyseal dysplasia-hearing loss-dysmorphism syndrome","secondary_identifiers":["SCTID:766870005","GARD:2178","UMLS:C4707857","MEDGEN:1643947"],"synonyms":[{"name":"Finucane Kurtz Scott syndrome","type":"related"},{"name":"Finucane-Kurtz-Scott syndrome","type":"exact"},{"name":"epiphyseal dysplasia hearing loss dysmorphism","type":"related"}],"termid":"MONDO:0015941","xrefs":{"Monarch":{"xref_id":"0015941"}}}


id: MONDO:0013788
data:
  {"annotated_genes":["SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88238],"is_not":false,"summary":null,"term":"MONDO:0013788"}]},"cv_name":"mondo","definition":"Any Usher syndrome in which the cause of the disease is a mutation in the HARS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 3","termid":"MONDO:0016485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 3B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3281066","MEDGEN:482696","GARD:15813","OMIM:614504","DOID:0110842","ICD10CM:H35.5"],"synonyms":[{"name":"HARS Usher syndrome","type":"exact"},{"name":"USH3B","type":"exact"},{"name":"USHER syndrome, type IIIB","type":"related"},{"name":"Usher syndrome caused by mutation in HARS","type":"exact"},{"name":"Usher syndrome type IIIB","type":"exact"},{"name":"Usher syndrome, type 3B","type":"related"}],"termid":"MONDO:0013788","terms_by_termid":{"MONDO:0013788":null},"xrefs":{"Monarch":{"xref_id":"0013788"}}}


id: GO:0102498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + maltose = 2 glucose.","definition_xrefs":["GOC:pz","PMID:16343940"],"gene_count":0,"genotype_count":0,"name":"obsolete maltose glucosidase activity (obsolete GO:0102498)","termid":"GO:0102498"}


id: GO:2001083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to alpha-D-glucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alpha-D-glucan binding","termid":"GO:2001083"}


id: PBO:0028912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_abnormal_septum","termid":"PBO:0028912"}


id: PR:000045546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2B-alpha (Schizosaccharomyces pombe) that has been monoubiquitinated on the most C-terminal Lys residue. Example: UniProtKB:P04913-1, Lys-120, PR:000044771.","definition_xrefs":["PomBase:MAH","PMID:27098497","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B-alpha (Schizosaccharomyces pombe)","termid":"PR:000045547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"htb1/MonoUbiq(K119)","pombase_gene_id":"SPCC622.09","secondary_identifiers":["PR:000036916"],"synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2B-alpha ubiquitinated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-htb1/Ubiq:1","type":"exact"},{"name":"htb1/MonoUbiq(K119)","type":"exact"},{"name":"htb1/MonoUbiq:(K120)","type":"exact"},{"name":"uH2B","type":"related"}],"termid":"PR:000045546"}


id: PBO:0048027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen silencer binding protein","termid":"PBO:0048027"}


id: PBO:0053140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6B","termid":"PBO:0053140"}


id: PBO:0077887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPRG1 antisense RNA 1","termid":"PBO:0077887"}


id: GO:0102481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3D-3,5/4-trihydroxycyclohexane-1,2-dione + H2O = 5-deoxy-D-glucuronate + H+.","definition_xrefs":["GOC:pz","RHEA:25836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase activity","secondary_identifiers":["EC:3.7.1.22","MetaCyc:RXN-14149"],"termid":"GO:0102481"}


id: PBO:0085731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the synthesis of GlcNAc-PI; GlcNAc-PI is the first intermediate in the synthesis of glycosylphosphatidylinositol (GPI) anchors; homologous to the human PIG-C protein; GlcNAc-PI stands for N-acetylglucosaminyl phosphatidylinositol","termid":"PBO:0085731"}


id: PR:Q9Y7T2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 89 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04472","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C63.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.06","secondary_identifiers":["UniProtKB:Q9Y7T2"],"synonyms":[{"name":"Spom972h-WDR89","type":"exact"}],"termid":"PR:Q9Y7T2"}


id: GO:0100001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any action potential process that regulates skeletal muscle contraction.","definition_xrefs":["GOC:obol","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential","termid":"GO:0001508"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by action potential","termid":"GO:0100001"}


id: MONDO:0019373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Desmoplastic small round cell tumor (DSRCT) is an aggressive soft tissue cancer that typically arises in serous lined surfaces of the abdominal or pelvic peritoneum, and spreads to the omentum, lymph nodes and hematogenously disseminates especially to the liver. Extraserous primary location has been reported in exceptional cases.","definition_xrefs":["Orphanet:83469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell sarcoma","termid":"MONDO:0006974"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"desmoplastic small round cell tumor","secondary_identifiers":["ICDO:8806/3","MESH:D058405","HGNC:12796","NANDO:2200059","MedDRA:10064587","NCIT:C8300","ONCOTREE:DSRCT","MEDGEN:83833","UMLS:C0281508","GARD:6265","EFO:1000895","DOID:6785","MedDRA:10064581"],"synonyms":[{"name":"DSRCT","type":"exact"},{"name":"Desmoplas. small round cell tumor","type":"exact"},{"name":"Desmoplas. small round cell tumour","type":"exact"},{"name":"Desmoplastic small round cell tumor","type":"exact"},{"name":"Desmoplastic small round cell tumour","type":"exact"},{"name":"Desmoplastic small round-cell neoplasm","type":"exact"},{"name":"Desmoplastic small round-cell tumor","type":"exact"},{"name":"Desmoplastic small round-cell tumour","type":"exact"},{"name":"Polyphenotypic small round cell tumor","type":"exact"},{"name":"Polyphenotypic small round cell tumour","type":"exact"},{"name":"desmoplastic small round cell tumor","type":"exact"},{"name":"desmoplastic small-round-cell tumor","type":"related"},{"name":"desmoplastic small-round-cell tumour","type":"related"}],"termid":"MONDO:0019373","xrefs":{"Monarch":{"xref_id":"0019373"}}}


id: MONDO:0016248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of ovarian cancer that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited gynecological tumor (obsolete MONDO:0015981)","termid":"MONDO:0015981"},{"relation_name":"excluded_subClassOf","term_name":"malignant non-epithelial tumor of ovary","termid":"MONDO:0018365"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial ovarian cancer","secondary_identifiers":["Orphanet:213517","UMLS:C5679802","GARD:20467","icd11.foundation:1484739866","MEDGEN:1803368"],"synonyms":[{"name":"familial ovarian cancer","type":"exact"},{"name":"familial ovarian malignant tumor","type":"exact"},{"name":"familial ovarian malignant tumour","type":"exact"},{"name":"hereditary ovarian cancer","type":"exact"}],"termid":"MONDO:0016248","xrefs":{"Monarch":{"xref_id":"0016248"}}}


id: GO:0047898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + ferricytochrome b1 = CO2 + ferrocytochrome b1.","definition_xrefs":["EC:1.2.2.1","MetaCyc:FORMATE-DEHYDROGENASE-CYTOCHROME-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","termid":"GO:0016622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formate dehydrogenase (cytochrome) activity","secondary_identifiers":["RHEA:21520"],"synonyms":[{"name":"formate:cytochrome b1 oxidoreductase activity","type":"related"},{"name":"formate:ferricytochrome-b1 oxidoreductase activity","type":"related"}],"termid":"GO:0047898"}


id: PBO:0055509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2943","termid":"PBO:0055509"}


id: PBO:0073938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 18 member A1","termid":"PBO:0073938"}


id: PBO:0084496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein involved in synaptonemal complex assembly; implicated in regulation of crossover formation; required for sporulation","termid":"PBO:0084496"}


id: GO:0048826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the cotyledon are generated and organized. The cotyledon is the modified leaf (seed leaf), found as part of the embryo in plant seeds. It is involved in either storage or absorption of food reserves. Dicotyledonous seeds contain two cotyledons, while monocotyledonous seeds contain only one. The cotyledons may appear above ground and show photosynthetic activity in the seedling.","definition_xrefs":["GOC:devbiol","GOC:tb","PO:0020030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaf morphogenesis","termid":"GO:0009965"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"cotyledon development","termid":"GO:0048825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cotyledon morphogenesis","termid":"GO:0048826"}


id: PBO:0042807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"competing endogenous lncRNA 1 for miR-4707-5p and miR-4767","termid":"PBO:0042807"}


id: GO:0032008
data:
  {"annotated_genes":["SJAG_05030","SJAG_00457","SJAG_00143","SJAG_04910","SJAG_00209","SJAG_04496","SJAG_03089","SJAG_02424","SJAG_03405","SJAG_00561","SJAG_03371","SJAG_02231","SJAG_06588","SJAG_03907","SJAG_02605","SJAG_05184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70907,74763],"is_not":false,"summary":null,"term":"GO:0032008"},{"annotations":[75756,77672,90124,96164,97963,114831,78212,112496,78551,77159,74288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[99621,93027,108923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TOR signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_03089":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03907":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of TOR signaling","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of TOR signaling pathway","type":"narrow"},{"name":"positive regulation of TOR signaling cascade","type":"related"},{"name":"positive regulation of TOR signaling pathway","type":"exact"},{"name":"positive regulation of TOR signalling pathway","type":"exact"},{"name":"positive regulation of target of rapamycin signaling pathway","type":"exact"},{"name":"positive regulation of target of rapamycin signalling pathway","type":"exact"},{"name":"stimulation of TOR signaling pathway","type":"narrow"},{"name":"up regulation of TOR signaling pathway","type":"exact"},{"name":"up-regulation of TOR signaling pathway","type":"exact"},{"name":"upregulation of TOR signaling pathway","type":"exact"}],"termid":"GO:0032008","terms_by_termid":{"GO:0032008":null,"GO:1904263":null,"GO:1904515":null}}


id: PBO:0040288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit beta 3","termid":"PBO:0040288"}


id: MONDO:0004411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gastrin-producing neuroendocrine tumor that arises from the duodenum. It is characterized by the presence of uniform cells that form pseudorosettes. The neoplastic cells have uniform nuclei and small amount of eosinophilic cytoplasm.","definition_xrefs":["NCIT:C5731"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"duodenum cancer","termid":"MONDO:0000920"},{"relation_name":"is_a","term_name":"gastrin-producing neuroendocrine tumor","termid":"MONDO:0003523"},{"relation_name":"is_a","term_name":"duodenal neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal gastrin-producing neuroendocrine tumor","secondary_identifiers":["MEDGEN:272550","DOID:7959","UMLS:C1333321"],"synonyms":[{"name":"duodenal G-cell gastrin producing tumor","type":"exact"},{"name":"duodenal G-cell gastrin producing tumour","type":"exact"},{"name":"duodenal gastrin-producing NET","type":"exact"},{"name":"duodenal gastrin-producing neuroendocrine tumor","type":"exact"},{"name":"duodenal gastrinoma","type":"exact"},{"name":"duodenum gastrin-producing neuroendocrine tumor","type":"exact"},{"name":"duodenum gastrin-producing neuroendocrine tumour","type":"exact"},{"name":"gastrin producing tumor of duodenum","type":"exact"},{"name":"gastrin producing tumor of the duodenum","type":"exact"},{"name":"gastrin producing tumour of duodenum","type":"exact"},{"name":"gastrin producing tumour of the duodenum","type":"exact"},{"name":"gastrin-producing neuroendocrine tumor of duodenum","type":"exact"},{"name":"gastrin-producing neuroendocrine tumour of duodenum","type":"exact"},{"name":"gastrinoma of duodenum","type":"exact"},{"name":"gastrinoma of the duodenum","type":"exact"},{"name":"malignant duodenal gastrinoma","type":"exact"}],"termid":"MONDO:0004411","xrefs":{"Monarch":{"xref_id":"0004411"}}}


id: PBO:0078753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 44 homolog","termid":"PBO:0078753"}


id: PBO:0048439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 2","termid":"PBO:0048439"}


id: PBO:0075971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 13","termid":"PBO:0075971"}


id: PBO:0055735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomodin 1","termid":"PBO:0055735"}


id: PBO:0058230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4520-1","termid":"PBO:0058230"}


id: PBO:0044811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 107B","termid":"PBO:0044811"}


id: PBO:0109317
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome Loss when Overexpressed","termid":"PBO:0109317"}


id: PBO:0075872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL1 divergent transcript","termid":"PBO:0075872"}


id: GO:1903142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of endothelial barrier.","definition_xrefs":["GOC:als","PMID:24851274","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endothelial cell development","termid":"GO:1901552"},{"relation_name":"is_a","term_name":"regulation of establishment of endothelial barrier","termid":"GO:1903140"},{"relation_name":"positively_regulates","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of endothelial barrier","synonyms":[{"name":"activation of establishment of endothelial barrier","type":"narrow"},{"name":"up regulation of establishment of endothelial barrier","type":"exact"},{"name":"up-regulation of establishment of endothelial barrier","type":"exact"},{"name":"upregulation of establishment of endothelial barrier","type":"exact"}],"termid":"GO:1903142"}


id: PBO:0049703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"harbinger transposase derived 1","termid":"PBO:0049703"}


id: MONDO:0023021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism lethal type advanced bone age","termid":"MONDO:0023021","xrefs":{"Monarch":{"xref_id":"0023021"}}}


id: MONDO:0859301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with craniofacial dysmorphism and skeletal defects","secondary_identifiers":["MEDGEN:1824008","OMIM:620083","Orphanet:662207","UMLS:C5774235"],"termid":"MONDO:0859301","xrefs":{"Monarch":{"xref_id":"0859301"}}}


id: PBO:0109837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTT co-chaperone complex, armadillo-type fold subunit Tti1","termid":"PBO:0109837"}


id: GO:0032649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon.","definition_xrefs":["GOC:mah","GOC:add","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"type II interferon production","termid":"GO:0032609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of type II interferon production","secondary_identifiers":["GO:0045072","GO:1902713"],"synonyms":[{"name":"regulation of interferon-gamma biosynthetic process","type":"narrow"},{"name":"regulation of interferon-gamma production","type":"exact"},{"name":"regulation of interferon-gamma secretion","type":"narrow"}],"termid":"GO:0032649"}


id: GO:1901172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytoene.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00799","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytoene metabolic process","synonyms":[{"name":"phytoene metabolism","type":"exact"}],"termid":"GO:1901172"}


id: GO:0102196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cortisol + NADP+ = cortisone + NADPH + H+.","definition_xrefs":["PMID:16216911","RHEA:68616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"11-beta-hydroxysteroid dehydrogenase (NADP+) activity","termid":"GO:0070524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cortisol dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN-12085"],"termid":"GO:0102196"}


id: GO:1904080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in neuron fate specification.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:11959845","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in neuron fate specification (obsolete GO:1904080)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in neuron fate specification","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in neuron fate specification","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global involved in neuron fate specification","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"}],"termid":"GO:1904080"}


