# terms

id: PBO:0081769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 701","termid":"PBO:0081769"}


id: GO:2000524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T cell costimulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of T cell costimulation","termid":"GO:2000523"},{"relation_name":"negatively_regulates","term_name":"T cell costimulation","termid":"GO:0031295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T cell costimulation","synonyms":[{"name":"negative regulation of T cell co-stimulation","type":"exact"},{"name":"negative regulation of T lymphocyte costimulation","type":"exact"},{"name":"negative regulation of T-cell co-stimulation","type":"exact"},{"name":"negative regulation of T-cell costimulation","type":"exact"},{"name":"negative regulation of T-lymphocyte costimulation","type":"exact"}],"termid":"GO:2000524"}


id: PBO:0054337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1730","termid":"PBO:0054337"}


id: MONDO:0009988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinoschisis","termid":"MONDO:0004579"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinoschisis of fovea","secondary_identifiers":["UMLS:C1849397","GARD:9143","MESH:C538369","MEDGEN:340313","OMIM:268080"],"synonyms":[{"name":"familial foveal retinoschisis","type":"related"},{"name":"foveal retinoschisis","type":"related"},{"name":"retinoschisis of fovea","type":"exact"}],"termid":"MONDO:0009988","xrefs":{"Monarch":{"xref_id":"0009988"}}}


id: FYPO:0007604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the outer surface of the spore wall is smooth, lacking the structures than protrude outward from normal spore walls.","definition_xrefs":["PomBase:mah","PMID:33202882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore wall morphology","termid":"FYPO:0003138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002946","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000121"],"is_obsolete":false,"name":"smooth ascospore wall","synonyms":[{"name":"smooth spore wall","type":"exact"}],"termid":"FYPO:0007604"}


id: PBO:0085994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for viability in rich media of cells lacking mitochondrial DNA; mutants have an invasive growth defect with elongated morphology; induced by amino acid starvation; ICY1 has a paralog, ATG41, that arose from the whole genome duplication","termid":"PBO:0085994"}


id: PBO:0075398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP110 nuclear body protein","termid":"PBO:0075398"}


id: SO:0000318
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"First codon to be translated by a ribosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start_codon","secondary_identifiers":["http://en.wikipedia.org/wiki/Start_codon"],"synonyms":[{"name":"initiation codon","type":"exact"},{"name":"start codon","type":"exact"}],"termid":"SO:0000318"}


id: GO:0097300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["GOC:mtg_apoptosis","PMID:21760595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed necrotic cell death","secondary_identifiers":["Reactome:R-HSA-5218859"],"synonyms":[{"name":"programmed cell death by necrosis","type":"exact"},{"name":"regulated necrosis","type":"broad"}],"termid":"GO:0097300"}


id: MOD:01764
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-131 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-131 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01764"}


id: GO:0038186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A nuclear receptor activity regulated by a bile acid binding and modulating the transcription of specific gene sets transcribed by RNA polymerase II.","definition_xrefs":["PMID:32480317","PMID:35415765","PMID:36409000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor activity","termid":"GO:0004879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0003700","GO:0140110","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"bile acid nuclear receptor activity","secondary_identifiers":["Reactome:R-HSA-5340195"],"synonyms":[{"name":"farnesoid X nuclear receptor activity","type":"related"},{"name":"farnesoid X receptor activity","type":"related"},{"name":"lithocholic acid receptor activity","type":"broad"}],"termid":"GO:0038186"}


id: PBO:0071534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35","termid":"PBO:0071534"}


id: GO:0100026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates DNA repair.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA repair by transcription from RNA polymerase II promoter (obsolete GO:0100026)","termid":"GO:0100026"}


id: GO:0003337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephros.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition","termid":"GO:0060231"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric renal vesicle morphogenesis","termid":"GO:0072283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","synonyms":[{"name":"metanephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:0003337"}


id: GO:0015161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transbilayer of capsular-polysaccharides (Und-PP-GlcNAc-ManNAcA-Fuc4NAc (lipid III)) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of ECA. Capsular polysaccharides make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:mtg_transport","GOC:ai","PMID:12621029","PMID:16816184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140303","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"lipid III floppase activity","secondary_identifiers":["TC:2.A.66.2.12","TC:2.A.66.2.3"],"synonyms":[{"name":"capsular polysaccharide transmembrane transporter activity","type":"related"},{"name":"capsule polysaccharide transporter activity","type":"broad"},{"name":"undecaprenol-pyrophosphate O-antigen flippase activity","type":"exact"}],"termid":"GO:0015161"}


id: FYPO:0001215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of a protein complex at the cellular level is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal protein-containing complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein complex assembly during vegetative growth","synonyms":[{"name":"normal cellular protein complex assembly during vegetative growth","type":"exact"},{"name":"normal protein complex assembly during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001215"}


id: GO:0097193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway starts with reception of an intracellular signal (e.g. DNA damage, endoplasmic reticulum stress, oxidative stress etc.), and ends when the execution phase of apoptosis is triggered. The intrinsic apoptotic signaling pathway is crucially regulated by permeabilization of the mitochondrial outer membrane (MOMP).","definition_xrefs":["GOC:yaf","PMID:11919192","PMID:18852119","GOC:mtg_apoptosis","PMID:17340152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway","secondary_identifiers":["Reactome:R-HSA-109606","GO:0008629"],"synonyms":[{"name":"induction of apoptosis by intracellular signals","type":"related"},{"name":"intrinsic apoptosis","type":"narrow"},{"name":"intrinsic apoptotic pathway","type":"exact"},{"name":"intrinsic apoptotic signalling pathway","type":"exact"},{"name":"mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:0097193"}


id: FYPO:0008369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tethering of the silent mating type cassette heterochromatin at the nuclear periphery is decreased.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin tethering at nuclear periphery","termid":"FYPO:0007768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased silent mating type cassette heterochromatin tethering to nuclear periphery during vegetative growth","termid":"FYPO:0008369"}


id: GO:0018990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shedding of the old chitin-based cuticlar fragments during the molting cycle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecdysis, chitin-based cuticle","termid":"GO:0018990"}


id: MONDO:0014528
data:
  {"annotated_genes":["SJAG_03989","SJAG_04623"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87209,87210],"is_not":false,"summary":null,"term":"MONDO:0014528"}]},"cv_name":"mondo","definition":"A syndrome characterized by a unique combination of cardiac arrhythmias and intestinal pseudo-obstruction. It has material basis in the mutated SGOL1 protein. Distinctive clinical features include atrial dysrhythmias, sick sinus syndrome (SSS) and valve anomalies and chronic intestinal pseudo-obstruction (CIPO).","definition_xrefs":["DOID:0060339","PMID:25282101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03989":null,"SJAG_04623":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic atrial and intestinal dysrhythmia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:720507006","OMIM:616201","MEDGEN:863911","UMLS:C4015474","GARD:12281","Orphanet:435988"],"synonyms":[{"name":"Cohesinopathy affecting heart and gut rhythm","type":"related"},{"name":"caid","type":"related"},{"name":"caid syndrome","type":"exact"},{"name":"chronic atrial and intestinal dysrhythmia","type":"exact"},{"name":"chronic atrial and intestinal dysrhythmia syndrome","type":"related"},{"name":"chronic atrial dysrhythmia-intestinal motility disorder","type":"exact"},{"name":"chronic atrial intestinal dysrhythmia syndrome","type":"related"}],"termid":"MONDO:0014528","terms_by_termid":{"MONDO:0014528":null},"xrefs":{"Monarch":{"xref_id":"0014528"}}}


id: PBO:0075333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbin and SH3 domain containing 2","termid":"PBO:0075333"}


id: PBO:0029600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium:hydrogen_antiporter_activity","termid":"PBO:0029600"}


id: PBO:0087548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauA domain of TFIIIC that binds BoxA DNA promoter sites of tRNA and similar genes; has TPR motifs; human homolog is TFIIIC-102","termid":"PBO:0087548"}


id: PBO:0063515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic and duodenal homeobox 1","termid":"PBO:0063515"}


id: PBO:0073595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature homeobox 2","termid":"PBO:0073595"}


id: MONDO:0019965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of ovarian benign neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare benign ovarian tumor (obsolete MONDO:0019965)","secondary_identifiers":["Orphanet:97293"],"synonyms":[{"name":"rare ovarian benign neoplasm","type":"exact"}],"termid":"MONDO:0019965","xrefs":{"Monarch":{"xref_id":"0019965"}}}


id: GO:0042182
data:
  {"annotated_genes":["SJAG_02988","SJAG_01596","SJAG_04404","SJAG_04674","SJAG_02106","SJAG_04726","SJAG_02960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104696,61657,74593,76227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[61405,59593,106969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ketones, a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ketone catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ketone breakdown","type":"exact"},{"name":"ketone catabolism","type":"exact"},{"name":"ketone degradation","type":"exact"}],"termid":"GO:0042182","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: GO:1904424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of GTP binding.","definition_xrefs":["PMID:19066305","GO_REF:0000059","PMID:21454546","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of GTP binding (obsolete GO:1904424)","termid":"GO:1904424"}


id: FYPO:0005110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal sodium export","synonyms":[{"name":"normal cellular sodium export","type":"exact"},{"name":"normal sodium export during mitotic cell cycle","type":"related"},{"name":"normal sodium export during vegetative growth","type":"exact"},{"name":"normal sodium export from cell","type":"exact"},{"name":"normal sodium ion export","type":"exact"}],"termid":"FYPO:0005110"}


id: MONDO:0030810
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88786,88787],"is_not":false,"summary":null,"term":"MONDO:0030810"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1807702","OMIM:619868","UMLS:C5676981"],"synonyms":[{"name":"PFIC10","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 10","type":"exact"}],"termid":"MONDO:0030810","terms_by_termid":{"MONDO:0030810":null},"xrefs":{"Monarch":{"xref_id":"0030810"}}}


id: PBO:0080606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 43","termid":"PBO:0080606"}


id: PBO:0039075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 3","termid":"PBO:0039075"}


id: MONDO:0019271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrokeratoderma (obsolete MONDO:0019271)","secondary_identifiers":["Orphanet:79356"],"termid":"MONDO:0019271","xrefs":{"Monarch":{"xref_id":"0019271"}}}


id: GO:0002791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of peptide transport","termid":"GO:0090087"},{"relation_name":"regulates","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of peptide secretion","termid":"GO:0002791"}


id: PBO:0049400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 1A","termid":"PBO:0049400"}


id: PBO:0035989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cAMP","termid":"PBO:0035989"}


id: GO:0032029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the tail region of a myosin heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"myosin tail binding","termid":"GO:0032029"}


id: GO:1901465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole metabolic process","termid":"GO:1901403"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"activation of tetrapyrrole anabolism","type":"exact"},{"name":"activation of tetrapyrrole biosynthesis","type":"exact"},{"name":"activation of tetrapyrrole biosynthetic process","type":"narrow"},{"name":"activation of tetrapyrrole formation","type":"exact"},{"name":"activation of tetrapyrrole synthesis","type":"exact"},{"name":"positive regulation of tetrapyrrole anabolism","type":"exact"},{"name":"positive regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"positive regulation of tetrapyrrole formation","type":"exact"},{"name":"positive regulation of tetrapyrrole synthesis","type":"exact"},{"name":"up regulation of tetrapyrrole anabolism","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"up regulation of tetrapyrrole formation","type":"exact"},{"name":"up regulation of tetrapyrrole synthesis","type":"exact"},{"name":"up-regulation of tetrapyrrole anabolism","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"up-regulation of tetrapyrrole formation","type":"exact"},{"name":"up-regulation of tetrapyrrole synthesis","type":"exact"},{"name":"upregulation of tetrapyrrole anabolism","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"upregulation of tetrapyrrole formation","type":"exact"},{"name":"upregulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901465"}


id: MONDO:1012609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unconjugated hyperbilirubinemia that occurs in horses.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperbilirubinemia, non-human animal","termid":"MONDO:1012974"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconjugated hyperbilirubinemia, horse","secondary_identifiers":["OMIA:000496-9796"],"synonyms":[{"name":"hyperbilirubinaemia I, horse","type":"related"}],"termid":"MONDO:1012609","xrefs":{"Monarch":{"xref_id":"1012609"}}}


id: PATO:0000440
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's having a repeatable or predictable placement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regular spatial pattern","termid":"PATO:0000440"}


id: PBO:0044596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 4 like 2","termid":"PBO:0044596"}


id: GO:0047652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: allantoate + H2O + H+ = CO2 + NH3 + ureidoglycine.","definition_xrefs":["EC:3.5.3.9","MetaCyc:ALLANTOATE-DEIMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"allantoate deiminase activity","secondary_identifiers":["RHEA:27485"],"synonyms":[{"name":"allantoate amidinohydrolase (decarboxylating)","type":"related"},{"name":"allantoate amidohydrolase activity","type":"related"}],"termid":"GO:0047652"}


id: FYPO:0001963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of papulacandin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to papulacandin B","synonyms":[{"name":"resistance to papulacandin B during mitotic cell cycle","type":"related"},{"name":"resistance to papulacandin B during vegetative growth","type":"exact"},{"name":"resistant to papulacandin B","type":"exact"}],"termid":"FYPO:0001963"}


id: PBO:0054249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1632","termid":"PBO:0054249"}


id: GO:0052177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host xylan (obsolete GO:0052177)","termid":"GO:0052177"}


id: GO:0022622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the root system over time, from its formation to the mature structure.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root system development","termid":"GO:0022622"}


id: PBO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADOP ribosylation factor GTPase activating protein family (predicted)","termid":"PBO:0002011"}


id: PBO:0082382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta3-like subunit of the yeast AP-3 complex; functions in transport of alkaline phosphatase to the vacuole via the alternate pathway; exists in both cytosolic and peripherally associated membrane-bound pools","termid":"PBO:0082382"}


id: FYPO:0004855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of premeiotic DNA replication is abnormal, resulting in rereplication of part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of premeiotic DNA replication initiation","termid":"FYPO:0004758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal negative regulation of premeiotic DNA replication initiation resulting in partial rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation resulting in partial rereplication during meiotic cell cycle","type":"related"},{"name":"abnormal negative regulation of initiation of premeiotic DNA replication, resulting in partial rereplication","type":"exact"},{"name":"abnormal negative regulation of premeiotic DNA replication initiation resulting in partial re-replication","type":"exact"},{"name":"partial premeiotic DNA re-replication","type":"related"},{"name":"partial premeiotic DNA rereplication","type":"related"}],"termid":"FYPO:0004855"}


id: MONDO:0015910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare constitutional hemolytic anemia (obsolete MONDO:0015910)","secondary_identifiers":["Orphanet:182043"],"synonyms":[{"name":"rare familial constitutional hemolytic anemia","type":"related"},{"name":"rare genetic constitutional hemolytic anemia","type":"related"}],"termid":"MONDO:0015910","xrefs":{"Monarch":{"xref_id":"0015910"}}}


id: MONDO:0015669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with dentinogenesis imperfecta (obsolete MONDO:0015669)","secondary_identifiers":["Orphanet:167762"],"termid":"MONDO:0015669","xrefs":{"Monarch":{"xref_id":"0015669"}}}


id: GO:0097608
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A motile cilium found in dinoflagellates. It coils around the cell and provides the forward thrust for motility. It is often contained in a furrow called the cingulum, and emerges from a flagellar pore located in the cingulum.","definition_xrefs":["Wikipedia:Dinoflagellate#Morphology","GOC:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"transverse flagellum","synonyms":[{"name":"transverse cilium","type":"exact"}],"termid":"GO:0097608"}


id: PBO:0085201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein required for accurate chromosome segregation; component of COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) a kinetochore sub-complex which functions as a platform for kinetochore assembly; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-Q and fission yeast fta7","termid":"PBO:0085201"}


id: PBO:0082654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ADA histone acetyltransferase complex; Ahc2p and Ahc1p are unique to the ADA complex and not shared with the related SAGA and SLIK complexes; may tether Ahc1p to the complex","termid":"PBO:0082654"}


id: PBO:0071911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 50","termid":"PBO:0071911"}


id: PBO:0057977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3692","termid":"PBO:0057977"}


id: PBO:0058146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4442","termid":"PBO:0058146"}


id: PBO:0081924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 962, pseudogene","termid":"PBO:0081924"}


id: PBO:0067744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 43","termid":"PBO:0067744"}


id: PBO:0084255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol monophosphatase; involved in biosynthesis of inositol; enzymatic activity requires magnesium ions and is inhibited by lithium and sodium ions; inm1 inm2 double mutant lacks inositol auxotrophy","termid":"PBO:0084255"}


id: PBO:0058438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5002","termid":"PBO:0058438"}


id: PBO:0088830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex Armadillo-type fold Rix1","termid":"PBO:0088830"}


id: MONDO:0007786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertrichosis lanuginosa congenita (obsolete MONDO:0007786)","termid":"MONDO:0007786","xrefs":{"Monarch":{"xref_id":"0007786"}}}


id: PBO:0046033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 1","termid":"PBO:0046033"}


id: PBO:0061122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 11","termid":"PBO:0061122"}


id: PBO:0043233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 4","termid":"PBO:0043233"}


id: GO:1901967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to iron ion starvation.","definition_xrefs":["PMID:23115244","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to iron ion starvation","termid":"GO:1901966"},{"relation_name":"negatively_regulates","term_name":"cellular response to iron ion starvation","termid":"GO:0010106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to iron ion starvation","synonyms":[{"name":"down regulation of cellular response to iron ion starvation","type":"exact"},{"name":"down-regulation of cellular response to iron ion starvation","type":"exact"},{"name":"downregulation of cellular response to iron ion starvation","type":"exact"},{"name":"inhibition of cellular response to iron ion starvation","type":"narrow"}],"termid":"GO:1901967"}


id: PBO:0086846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pyridoxine 4-dehydrogenase; differentially expressed during alcoholic fermentation; expression activated by transcription factor YRM1/YOR172W; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086846"}


id: GO:0071711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the basement membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basement membrane organization","synonyms":[{"name":"basement membrane organisation","type":"exact"}],"termid":"GO:0071711"}


id: PBO:0074013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 4","termid":"PBO:0074013"}


id: MONDO:0015114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare parenchymal liver disease (obsolete MONDO:0015114)","secondary_identifiers":["Orphanet:101939"],"termid":"MONDO:0015114","xrefs":{"Monarch":{"xref_id":"0015114"}}}


id: GO:0072763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hesperadin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amine stimulus","termid":"GO:0071418"},{"relation_name":"is_a","term_name":"response to hesperadin","termid":"GO:1901595"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hesperadin","termid":"GO:0072763"}


id: PBO:0062275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 6","termid":"PBO:0062275"}


id: PBO:0064846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 13 like","termid":"PBO:0064846"}


id: PBO:0075794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 12","termid":"PBO:0075794"}


id: PBO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFC related checkpoint protein Rad17","termid":"PBO:0002903"}


id: PBO:0035749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_telomere_during_vegetative_growth","termid":"PBO:0035749"}


id: GO:0003799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, fungal cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antifungal peptide activity (obsolete GO:0003799)","synonyms":[{"name":"antifungal peptide activity","type":"exact"}],"termid":"GO:0003799"}


id: GO:0021920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of neuronal precursors to association neurons in the dorsal spinal cord.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","GOC:jid","PMID:12593981"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification (obsolete GO:0021920)","termid":"GO:0021920"}


id: GO:0046286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavonoid phytoalexins, a group of water-soluble phenolic derivatives containing a flavan skeleton, which possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid catabolic process","termid":"GO:0046275"},{"relation_name":"is_a","term_name":"flavonoid phytoalexin metabolic process","termid":"GO:0046285"},{"relation_name":"is_a","term_name":"phytoalexin catabolic process","termid":"GO:0052316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"flavonoid phytoalexin catabolic process","synonyms":[{"name":"flavonoid phytoalexin breakdown","type":"exact"},{"name":"flavonoid phytoalexin catabolism","type":"exact"},{"name":"flavonoid phytoalexin degradation","type":"exact"}],"termid":"GO:0046286"}


id: MONDO:0005802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by tapeworms. Most infected individuals do not have symptoms. When symptoms appear, they include diarrhea, abdominal pain, restlessness, and irritability.","definition_xrefs":["NCIT:C84768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hymenolepiasis","secondary_identifiers":["MESH:D006925","SCTID:44917000","GARD:2787","UMLS:C0020413","ICD9:123.6","DOID:10074","MedDRA:10020546","ICD10CM:B71.0","EFO:0007317","Orphanet:401","icd11.foundation:2028864113","MEDGEN:43772"],"synonyms":[{"name":"Hymenolepis infectious disease","type":"exact"},{"name":"Hymenolepsis infection","type":"related"},{"name":"dwarf tapeworm infection","type":"exact"},{"name":"hymenolepiasis","type":"exact"}],"termid":"MONDO:0005802","xrefs":{"Monarch":{"xref_id":"0005802"}}}


id: GO:0021593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the rhombomere is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere morphogenesis","termid":"GO:0021593"}


id: PBO:0089020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-methyltransferase Trm13","termid":"PBO:0089020"}


id: PBO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA Meu3","termid":"PBO:0004984"}


id: GO:0043867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA guanine + 7-cyano-7-deazaguanine = tRNA 7-cyano-7-deazaguanine + guanine.","definition_xrefs":["PMID:16407303","PMID:7748953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140101","GO:0016757","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine tRNA-ribosyltransferase activity","synonyms":[{"name":"TgtA","type":"related"},{"name":"archaeal tRNA-guanine transglycosylase activity","type":"exact"},{"name":"archaeosine tRNA-ribosyltransferase activity","type":"exact"}],"termid":"GO:0043867"}


id: PBO:0044489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 46 subfamily A member 1","termid":"PBO:0044489"}


id: PBO:0085760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in the cell cycle checkpoint into anaphase; in complex with Mad1p and Bub3p, prevents progression into anaphase in presence of spindle damage; Cdc28p-mediated phosphorylation at Bub1p-T566 is important for degradation in anaphase and adaptation of checkpoint to prolonged mitotic arrest; associates with centromere DNA via Skp1p; involved in Sgo1p relocalization in response to sister kinetochore tension; paralog MAD3 arose from whole genome duplication","termid":"PBO:0085760"}


id: PBO:0061556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, cytosolic pseudogene 3","termid":"PBO:0061556"}


id: MONDO:0019418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-epilepsy-progressive joint contractures-dysmorphism syndrome is characterized by intellectual deficit, epilepsy, facial dysmorphism and progressive joint contractures. It has been described in two boys. Hypotonia and feeding problems at birth were also reported. The mode of transmission is X-linked.","definition_xrefs":["Orphanet:85319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability-epilepsy-progressive joint contractures-dysmorphism syndrome","secondary_identifiers":["MEDGEN:930586","UMLS:C4304917","GARD:19054"],"termid":"MONDO:0019418","xrefs":{"Monarch":{"xref_id":"0019418"}}}


id: PBO:0090196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ksp1","termid":"PBO:0090196"}


id: PBO:0088386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein disulfide isomerase","termid":"PBO:0088386"}


id: GO:0006471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to protein amino acids.","definition_xrefs":["GOC:pr","RESID:AA0168","RESID:AA0231","RESID:AA0169","RESID:AA0237","RESID:AA0295","RESID:AA0040"],"gene_count":0,"genotype_count":0,"name":"obsolete protein ADP-ribosylation (obsolete GO:0006471)","synonyms":[{"name":"protein amino acid ADP-ribosylation","type":"exact"}],"termid":"GO:0006471"}


id: GO:0061093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["GOC:jh","PMID:19966303","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid transport","termid":"GO:2001139"},{"relation_name":"negatively_regulates","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipid translocation","termid":"GO:0061093"}


id: GO:0004322
data:
  {"annotated_genes":["SJAG_04677","SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59188,79491],"is_not":false,"summary":null,"term":"GO:0004322"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O.","definition_xrefs":["RHEA:11148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, oxygen as acceptor","termid":"GO:0016724"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03862":null,"SJAG_04677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ferroxidase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1562626","Reactome:R-HSA-1562604","Reactome:R-HSA-1562603","Reactome:R-HSA-5691107","Reactome:R-HSA-917933","EC:1.16.3.1","Reactome:R-HSA-5621402","Reactome:R-HSA-917891","MetaCyc:RXN0-1483"],"synonyms":[{"name":"Fe(II):oxygen oxidoreductase activity","type":"related"},{"name":"HEPH","type":"narrow"},{"name":"caeruloplasmin","type":"narrow"},{"name":"ceruloplasmin","type":"narrow"},{"name":"ferro:O2 oxidoreductase activity","type":"related"},{"name":"ferroxidase I","type":"related"},{"name":"ferroxidase, iron II:oxygen oxidoreductase activity","type":"related"},{"name":"hephaestin","type":"narrow"},{"name":"iron(II): oxygen oxidoreductase activity","type":"related"},{"name":"multicopper ferroxidase iron transport mediator activity","type":"narrow"}],"termid":"GO:0004322","terms_by_termid":{"GO:0004322":null}}


id: GO:0016154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrimidine nucleoside + phosphate = pyrimidine + alpha-D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"pyrimidine-nucleoside phosphorylase activity","synonyms":[{"name":"Py-NPase activity","type":"related"},{"name":"pyrimidine-nucleoside:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0016154"}


id: GO:0001197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mating-type specific process that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mating-type specific transcription from RNA polymerase II promoter (obsolete GO:0001197)","synonyms":[{"name":"activation of transcription from an RNA polymerase II promoter, mating-type specific","type":"narrow"},{"name":"stimulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"narrow"},{"name":"up regulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"},{"name":"up-regulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"},{"name":"upregulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"}],"termid":"GO:0001197"}


id: PBO:0071329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 6","termid":"PBO:0071329"}


id: PBO:0119634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 38","termid":"PBO:0119634"}


id: GO:0046044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving TMP, ribosylthymine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"TMP metabolic process","synonyms":[{"name":"TMP metabolism","type":"exact"}],"termid":"GO:0046044"}


id: GO:0005318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphate:hydrogen symporter (obsolete GO:0005318)","synonyms":[{"name":"phosphate:hydrogen symporter","type":"exact"},{"name":"phosphate:proton symporter activity","type":"exact"}],"termid":"GO:0005318"}


id: PATO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located far (not close to) in space in relation to another entity.","definition_xrefs":["PATOC:PM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far from","synonyms":[{"name":"distant from","type":"exact"},{"name":"remote from","type":"exact"}],"termid":"PATO:0002233"}


id: PBO:0119650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corepressor of RBPJ and splicing regulator","termid":"PBO:0119650"}


id: PBO:0001221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt71","termid":"PBO:0001221"}


id: PBO:0075651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 7 pseudogene 1","termid":"PBO:0075651"}


id: RO:0002597
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_regulating","termid":"RO:0002596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_negatively_regulating","termid":"RO:0002597"}


id: MONDO:0011619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crumpled helices and small mouth","secondary_identifiers":["UMLS:C1853826","MEDGEN:342976","MESH:C536217","OMIM:605945"],"synonyms":[{"name":"crumpled helices and small mouth","type":"exact"},{"name":"sparse hair, prominent nose, small mouth, micrognathia, cleft palate, crumpled upper helices, digit anomaly, and mild developmental delay","type":"related"}],"termid":"MONDO:0011619","xrefs":{"Monarch":{"xref_id":"0011619"}}}


id: GO:0043233
data:
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id: GO:0160141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(955/2504/2580) in 23S rRNA = pseudouridine(955/2504/2580) in 23S rRNA.","definition_xrefs":["RHEA:42528","EC:5.4.99.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0016853"],"is_obsolete":false,"name":"23S rRNA pseudouridine(955/2504/2580) synthase activity","termid":"GO:0160141"}


id: PBO:0041548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 32","termid":"PBO:0041548"}


id: PBO:0077896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrapeptide repeat homeobox 1 pseudogene 1","termid":"PBO:0077896"}


id: PBO:0113179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-related motor protein and plus-end directed microtubule (MT) polymerase; involved in mitotic spindle positioning, nuclear migration, microtubule polymerization and inhibition of MT catastrophe; stabilizes microtubules by targeting Bik1p to the MT plus end; Kip2p levels are controlled during the cell cycle","termid":"PBO:0113179"}


id: SO:0001417
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A flanking region located three prime of a specific region.","definition_xrefs":["SO:chado"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanking_region","termid":"SO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_flanking_region","synonyms":[{"name":"3' flanking region","type":"related"},{"name":"three prime flanking region","type":"exact"}],"termid":"SO:0001417"}


id: PBO:0005888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Aspartic acid, mitochondrial","termid":"PBO:0005888"}


id: MONDO:0017313
data:
  {"annotated_genes":["SJAG_03712","SJAG_01616","SJAG_01466","SJAG_03447"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[87087,87088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[87917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032705"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of vitamin and non-protein cofactor absorption and transport","termid":"MONDO:0017758"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_01616":null,"SJAG_03447":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of folate metabolism and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842423","Orphanet:285657","GARD:21131","icd11.foundation:2081529009","UMLS:C5681010"],"termid":"MONDO:0017313","terms_by_termid":{"MONDO:0009238":null,"MONDO:0009353":null,"MONDO:0032705":null},"xrefs":{"Monarch":{"xref_id":"0017313"}}}


id: SO:0001017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that does not affect protein function. Silent mutations may occur in genic ( CDS, UTR, intron etc) and intergenic regions. Silent mutations may have affects on processes such as splicing and regulation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silent_mutation","secondary_identifiers":["http://en.wikipedia.org/wiki/Silent_mutation","loinc:LA6700-4"],"synonyms":[{"name":"silent mutation","type":"exact"}],"termid":"SO:0001017"}


id: PBO:0041979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 22","termid":"PBO:0041979"}


id: PBO:0000509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase Pis1 (predicted)","termid":"PBO:0000509"}


id: PBO:0012023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator subunit Elp1 (predicted)","termid":"PBO:0012023"}


id: FYPO:0004613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the spindle pole body is not attached to any interphase cytoplasmic microtubules; as a result, the microtubules are not connected to the nucleus. Normally, the spindle pole body is attached to at least one cytoplasmic microtubule bundle.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished microtubule attachment to spindle pole body","synonyms":[{"name":"SPB detached from cytoplasmic microtubules","type":"exact"},{"name":"abolished microtubule attachment to nucleus","type":"broad"},{"name":"abolished microtubule attachment to spindle pole body during mitotic cell cycle","type":"related"},{"name":"abolished microtubule attachment to spindle pole body during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules absent from mitotic spindle pole body","type":"exact"},{"name":"cytoplasmic microtubules detached from spindle pole body","type":"exact"},{"name":"interphase microtubules detached from nucleus","type":"exact"},{"name":"interphase microtubules detached from spindle pole body","type":"exact"},{"name":"spindle pole body detached from cytoplasmic microtubules","type":"exact"}],"termid":"FYPO:0004613"}


id: PBO:0067370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 471, pseudogene","termid":"PBO:0067370"}


id: MOD:00108
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to L-tyrosine amide.","definition_xrefs":["PubMed:3562898","PubMed:1377792","RESID:AA0099","PubMed:6509012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tyrosine amide","synonyms":[{"name":"(2S)-2-amino-3-(4-hydoxyphenyl)propanamide","type":"exact"},{"name":"L-tyrosine amide","type":"exact"},{"name":"MOD_RES Tyrosine amide","type":"exact"},{"name":"TyrN","type":"exact"},{"name":"amidated L-tyrosine","type":"exact"},{"name":"tyrosinamide","type":"exact"}],"termid":"MOD:00108"}


id: PBO:0083819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and import into the ER; other members are Sec62p, Sec66p, and Sec72p","termid":"PBO:0083819"}


id: PBO:0069007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 251, pseudogene","termid":"PBO:0069007"}


id: PBO:0049287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 6, pseudogene","termid":"PBO:0049287"}


id: PBO:0012590
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human NF1","termid":"PBO:0012590"}


id: MONDO:0957202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 7","secondary_identifiers":["DOID:0070598","MEDGEN:1840203","OMIM:301106","UMLS:C5829567"],"termid":"MONDO:0957202","xrefs":{"Monarch":{"xref_id":"0957202"}}}


id: SO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a peptide that is able to excise itself and rejoin the remaining portions with a peptide bond.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"intein","secondary_identifiers":["http://en.wikipedia.org/wiki/Intein"],"synonyms":[{"name":"protein intron","type":"related"}],"termid":"SO:0000728"}


id: PBO:0011151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrof olatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase (predicted)","termid":"PBO:0011151"}


id: PBO:0091384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Ca(2+)/H(+) antiporter Gdt2","termid":"PBO:0091384"}


id: PBO:0068762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 7, pseudogene","termid":"PBO:0068762"}


id: GO:0010511
data:
  {"annotated_genes":["SJAG_03170","SJAG_02613","SJAG_00053"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92236,59688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[119523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol.","definition_xrefs":["GOC:tb","GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_02613":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0010511","terms_by_termid":{"GO:1902647":null,"GO:1902648":null}}


id: FYPO:0001138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature 5.8S rRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature rRNA level","termid":"FYPO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased mature 5.8S rRNA level","synonyms":[{"name":"decreased 5.8S rRNA level","type":"broad"},{"name":"decreased 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 5.8S rRNA accumulation","type":"related"},{"name":"decreased mature 5.8S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 5.8S rRNA transcript level","type":"exact"},{"name":"reduced mature 5.8S rRNA level","type":"exact"}],"termid":"FYPO:0001138"}


id: GO:0052704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway resulting in the formation of ergothioneine from histidine via a set of steps in which gamma-glutamyl-hercynylcysteine sulfoxide is formed as an intermediate.","definition_xrefs":["PMID:4276459","PMID:5484456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergothioneine biosynthetic process","termid":"GO:0052699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"ergothioneine biosynthesis from histidine via gamma-glutamyl-hercynylcysteine sulfoxide","secondary_identifiers":["Wikipedia:Ergothioneine"],"synonyms":[{"name":"ergothioneine biosynthesis from histidine via N-alpha,N-alpha,N-alpha-trimethyl-L-histidine","type":"broad"}],"termid":"GO:0052704"}


id: FYPO:0000614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic S phase progression","termid":"FYPO:0000610"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of mitotic S phase","secondary_identifiers":["FYPO:0000612","FYPO:0000613"],"synonyms":[{"name":"decreased rate of mitotic S phase progression","type":"related"},{"name":"delayed mitotic S phase progression","type":"related"},{"name":"delayed mitotic S phase progression during vegetative growth","type":"related"},{"name":"increased S phase index","type":"related"},{"name":"increased duration of S phase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic S phase during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in S phase: decreased rate","type":"related"},{"name":"mitotic cell cycle progression in S phase: delayed","type":"related"},{"name":"mitotic cell cycle progression in S phase: increased duration","type":"related"},{"name":"prolonged mitotic S phase","type":"exact"},{"name":"reduced rate of mitotic S phase progression","type":"related"}],"termid":"FYPO:0000614"}


id: PBO:0113387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by expression profiling and mass spectrometry; localizes to the peroxisome in a Pex5p-dependent manner in oleate","termid":"PBO:0113387"}


id: PBO:0058428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4798","termid":"PBO:0058428"}


id: PBO:0058809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7851","termid":"PBO:0058809"}


id: PBO:0043594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXIV alpha 1 chain","termid":"PBO:0043594"}


id: GO:0110021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cardiac muscle myoblasts, resulting in the expansion of a cardiac muscle myoblast cell population. A cardiac myoblast is a precursor cell that has been committed to a cardiac muscle cell fate but retains the ability to divide and proliferate throughout life.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:26512644","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle myoblast proliferation","termid":"GO:0110021"}


id: PBO:0081693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 615","termid":"PBO:0081693"}


id: MOD:00825
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-cysteine residue by a thioester bond to form S-(L-phenylalaninyl)-L-cysteine.","definition_xrefs":["PubMed:12591958","RESID:AA0414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-phenylalanyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-3-phenylpropanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Phenylalanyl cysteine thioester (Cys-Phe)","type":"exact"},{"name":"S-(2-amino-3-phenylpropanoyl)cysteine","type":"exact"},{"name":"S-(L-phenylalanyl)-L-cysteine","type":"exact"},{"name":"XLNK1PheSCys","type":"exact"},{"name":"phenylalanine cysteine thioester","type":"exact"}],"termid":"MOD:00825"}


id: PBO:0063791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20","termid":"PBO:0063791"}


id: PBO:0090791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub3","termid":"PBO:0090791"}


id: MONDO:1010480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Supravalvular aortic stenosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supravalvular aortic stenosis, non-human animal","termid":"MONDO:1010020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supravalvular aortic stenosis, domestic cat","secondary_identifiers":["OMIA:000960-9685"],"termid":"MONDO:1010480","xrefs":{"Monarch":{"xref_id":"1010480"}}}


id: GO:0033179
data:
  {"annotated_genes":["SJAG_02782","SJAG_05294","SJAG_01913","SJAG_02023","SJAG_03962","SJAG_00516","SJAG_03406"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97510,93889,62650,97691,105811,91983,101827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000220"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting V-type ATPase and mediates proton transport across a membrane. The V0 complex consists of at least four different subunits (a,c,d and e); six or more c subunits form a proton-binding rotor ring.","definition_xrefs":["PMID:16449553","GOC:mah","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, proton-transporting domain","termid":"GO:0033177"},{"relation_name":"part_of","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03962":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting V-type ATPase, V0 domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0033179","terms_by_termid":{"GO:0000220":null}}


id: PBO:0054851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2265","termid":"PBO:0054851"}


id: FYPO:0005779
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during vegetative growth","termid":"FYPO:0002901"},{"relation_name":"is_a","term_name":"normal protein localization during mitosis","termid":"FYPO:0004328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitosis","synonyms":[{"name":"normal protein localisation to kinetochore during mitosis","type":"exact"},{"name":"normal protein localization to kinetochore during mitotic M phase","type":"related"},{"name":"normal protein localization to kinetochore during mitotic nuclear division","type":"related"}],"termid":"FYPO:0005779"}


id: GO:0040032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the post-embryonic soma are generated and organized.","definition_xrefs":["GOC:ems","ISBN:0140512888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"body morphogenesis","termid":"GO:0010171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic body morphogenesis","termid":"GO:0040032"}


id: PBO:0054493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1893","termid":"PBO:0054493"}


id: PBO:0059837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTFR1 pseudogene 1","termid":"PBO:0059837"}


id: PBO:0017855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase (predicted)","termid":"PBO:0017855"}


id: PBO:0087058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L28; homologous to mammalian ribosomal protein L27A and bacterial L15; may have peptidyl transferase activity; can mutate to cycloheximide resistance","termid":"PBO:0087058"}


id: PBO:0073212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 4D","termid":"PBO:0073212"}


id: PR:Q9UUI1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11021:SF0","OMA:SCHPO01629","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.17c","secondary_identifiers":["UniProtKB:Q9UUI1"],"synonyms":[{"name":"Spom972h-LSM6","type":"exact"}],"termid":"PR:Q9UUI1"}


id: PBO:0089439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII adaptor Erv29","termid":"PBO:0089439"}


id: PBO:0057366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ai","termid":"PBO:0057366"}


id: GO:0102779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cannabigerolate + O2 = cannabidiolate + hydrogen peroxide.","definition_xrefs":["GOC:pz","RHEA:34411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cannabidiolate synthase activity","secondary_identifiers":["EC:1.21.3.8","MetaCyc:RXN-7855"],"termid":"GO:0102779"}


id: GO:0072382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a vesicle towards the minus end of a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"minus-end-directed organelle transport along microtubule","termid":"GO:0072385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"minus-end-directed vesicle transport along microtubule","synonyms":[{"name":"microtubule minus-end-directed vesicle distribution","type":"narrow"},{"name":"microtubule minus-end-directed vesicle localization","type":"exact"}],"termid":"GO:0072382"}


id: MONDO:0005389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sclerosing cholangitis (obsolete MONDO:0005389)","termid":"MONDO:0005389","xrefs":{"Monarch":{"xref_id":"0005389"}}}


id: PBO:0086419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase activating protein (GAP) with a role in exocytosis; stimulates Gyp5p GAP activity on Ypt1p, colocalizes with Gyp5p at sites of polarized growth; interacts with Gyp5p, Rvs161p, and Rvs167p; involved in recruiting Rvs167p to the bud tip during polarized growth; increases in abundance and relocalizes from bud neck to cytoplasm upon DNA replication stress; GYL1 has a paralog, GYP5, that arose from the whole genome duplication","termid":"PBO:0086419"}


id: PBO:0059898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 21","termid":"PBO:0059898"}


id: PBO:0088354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase/IP8 pyrophosphatase","termid":"PBO:0088354"}


id: PBO:0086255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that promotes the transport and maturation of Pma1 with Exp1; cleaved specifically by Kex2p; localizes to the Golgi apparatus and to the endoplasmic reticulum in HTP studies","termid":"PBO:0086255"}


id: MONDO:0001002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pulmonary siderosis (obsolete MONDO:0001002)","termid":"MONDO:0001002","xrefs":{"Monarch":{"xref_id":"0001002"}}}


id: GO:0140949
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63686],"is_not":false,"summary":null,"term":"GO:0140949"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl9-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl9-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the unmethylated lysine residue at position 9 of histone H3, producing histone H3K9me3.","definition_xrefs":["RHEA:60276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0008276","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"histone H3K9 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.1.1.355"],"synonyms":[{"name":"histone H3-K9 trimethylation","type":"broad"},{"name":"histone H3K9 mono/di/trimethylase activity","type":"exact"},{"name":"histone H3K9 trimethylase activity","type":"exact"},{"name":"histone H3K9 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140949","terms_by_termid":{"GO:0140949":null}}


id: PBO:0050957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon kappa","termid":"PBO:0050957"}


id: GO:0014745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle adaptation","synonyms":[{"name":"negative regulation of muscle plasticity","type":"related"}],"termid":"GO:0014745"}


id: PBO:0034606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0034606"}


id: GO:0052170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of the innate immune response of the host organism, the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host innate immune response","secondary_identifiers":["GO:0052309","Reactome:R-HSA-9637687"],"synonyms":[{"name":"down regulation by symbiont of host innate immunity","type":"exact"},{"name":"down-regulation by symbiont of host innate immunity","type":"exact"},{"name":"downregulation by symbiont of host innate immunity","type":"exact"},{"name":"inhibition by symbiont of host innate immunity","type":"narrow"},{"name":"negative regulation by symbiont of host innate immune response","type":"exact"},{"name":"negative regulation by symbiont of host innate immunity","type":"exact"},{"name":"negative regulation of host innate immune response","type":"exact"},{"name":"negative regulation of innate immune response in other organism","type":"broad"},{"name":"suppression by symbiont of host innate immune response","type":"exact"},{"name":"suppression of host innate immune response","type":"exact"}],"termid":"GO:0052170"}


id: GO:0043944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of a cellular spore derived from the products of mitosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042174"},{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"is_a","term_name":"negative regulation of asexual reproduction","termid":"GO:1903665"},{"relation_name":"negatively_regulates","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"}


id: GO:1902320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA duplex unwinding that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear DNA replication DNA duplex unwinding (obsolete GO:1902320)","synonyms":[{"name":"DNA duplex unwinding involved in DNA replication during S phase","type":"related"},{"name":"DNA duplex unwinding involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA duplex unwinding involved in DNA replication involved in S-phase","type":"exact"},{"name":"DNA duplex unwinding involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA unwinding involved in DNA replication during S phase","type":"related"},{"name":"DNA unwinding involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA unwinding involved in DNA replication involved in S-phase","type":"exact"},{"name":"DNA unwinding involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"duplex DNA melting involved in DNA replication during S phase","type":"related"},{"name":"duplex DNA melting involved in DNA replication involved in S phase","type":"exact"},{"name":"duplex DNA melting involved in DNA replication involved in S-phase","type":"exact"}],"termid":"GO:1902320"}


id: GO:0150163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a microRNA (miRNA) that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:aruk","PMID:20737563","PMID:27145859"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA-mediated activation of transcription by RNA polymerase II (obsolete GO:0150163)","termid":"GO:0150163"}


id: MONDO:0005064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious meningitis (obsolete MONDO:0005064)","termid":"MONDO:0005064","xrefs":{"Monarch":{"xref_id":"0005064"}}}


id: PBO:0079146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 8","termid":"PBO:0079146"}


id: FYPO:0001654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of arginine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal arginine import","synonyms":[{"name":"abnormal L-arginine import","type":"exact"},{"name":"abnormal L-arginine import across plasma membrane","type":"exact"},{"name":"abnormal arginine import during mitotic cell cycle","type":"related"},{"name":"abnormal arginine import during vegetative growth","type":"exact"},{"name":"abnormal arginine import into cell","type":"exact"},{"name":"abnormal arginine uptake","type":"exact"}],"termid":"FYPO:0001654"}


id: PBO:0060562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin pseudogene 6","termid":"PBO:0060562"}


id: PBO:0004286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,3-beta-glucosidase Exg3","termid":"PBO:0004286"}


id: PBO:0062501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 1","termid":"PBO:0062501"}


id: PBO:0084322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin beta; mediates nuclear import of ribosomal proteins prior to assembly into ribosomes and import of histones H3 and H4; localizes to the nuclear pore, nucleus, and cytoplasm; exhibits genetic interactions with RAI1","termid":"PBO:0084322"}


id: PBO:0041390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 58","termid":"PBO:0041390"}


id: PR:Q10208
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate kinase I that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.10c","secondary_identifiers":["UniProtKB:Q10208"],"synonyms":[{"name":"PK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC4H3.10c","type":"related"},{"name":"Spom972h-pykF","type":"exact"}],"termid":"PR:Q10208"}


id: PBO:0076604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 23","termid":"PBO:0076604"}


id: GO:0043366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which successful recombination of a T cell receptor beta chain into a translatable protein coding sequence leads to rescue from apoptosis and subsequent proliferation of an immature T cell.","definition_xrefs":["ISBN:0781735149","PMID:12220932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"},{"relation_name":"part_of","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta selection","termid":"GO:0043366"}


id: PBO:0038466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 5","termid":"PBO:0038466"}


id: FYPO:0000714
data:
  {"alleles_by_uniquename":{"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121638],"is_not":false,"summary":null,"term":"FYPO:0000714"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to leptomycin B. Cells stop growing (and may die) at a concentration of leptomycin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05207":null},"genotype_count":1,"genotypes_by_uniquename":{"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to leptomycin B","references_by_uniquename":{"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_05207"],"single_locus_genotype_uniquenames":["cmp7delta"],"synonyms":[{"name":"hypersensitive to leptomycin B","type":"exact"},{"name":"sensitive to LMB","type":"exact"},{"name":"sensitive to leptomycin B during mitotic cell cycle","type":"related"},{"name":"sensitive to leptomycin B during vegetative growth","type":"exact"}],"termid":"FYPO:0000714","terms_by_termid":{"FYPO:0000714":null}}


id: FYPO:0005564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are shorter and thinner than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thin stable microtubule bundle","termid":"FYPO:0005560"},{"relation_name":"is_a","term_name":"short stable microtubule bundle","termid":"FYPO:0005562"},{"relation_name":"is_a","term_name":"short disorganized microtubule bundle","termid":"FYPO:0005796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"short, thin stable microtubule bundle","synonyms":[{"name":"decreased stable microtubule bundle length and thickness","type":"exact"},{"name":"short, thin Q-MT bundles","type":"exact"},{"name":"short, thin quiescent cell MT bundle","type":"exact"},{"name":"short, thin quiescent cell microtubule bundle","type":"exact"},{"name":"short, thin stable microtubule array","type":"related"},{"name":"short, thin static microtubule bundle","type":"exact"}],"termid":"FYPO:0005564"}


id: PBO:0059393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S26","termid":"PBO:0059393"}


id: GO:0032561
data:
  {"annotated_genes":["SJAG_02684","SJAG_04375","SJAG_03374","SJAG_02374","SJAG_00226","SJAG_00466","SJAG_00414","SJAG_02656","SJAG_00801","SJAG_04233","SJAG_03453","SJAG_04410","SJAG_01456","SJAG_04387","SJAG_02605","SJAG_01339","SJAG_05030","SJAG_00424","SJAG_04003","SJAG_00231","SJAG_01909","SJAG_03915","SJAG_03342","SJAG_04509","SJAG_02856","SJAG_02302","SJAG_02604","SJAG_04666","SJAG_02848","SJAG_00906","SJAG_01438","SJAG_02509","SJAG_00360","SJAG_02353","SJAG_01449","SJAG_01774","SJAG_03188","SJAG_00430","SJAG_04862","SJAG_01929","SJAG_02233","SJAG_01695","SJAG_02824","SJAG_03846","SJAG_00983","SJAG_00457","SJAG_04366","SJAG_04940","SJAG_02180","SJAG_02366","SJAG_01558","SJAG_01534","SJAG_01391","SJAG_02640","SJAG_03461","SJAG_03275","SJAG_01696","SJAG_03732","SJAG_03688","SJAG_03684","SJAG_02384","SJAG_01215","SJAG_04874","SJAG_03371","SJAG_00344","SJAG_04351","SJAG_01277","SJAG_00659","SJAG_02331","SJAG_04004","SJAG_02601","SJAG_04343","SJAG_03137","SJAG_02292","SJAG_02171","SJAG_02595","SJAG_00031","SJAG_00968","SJAG_01379","SJAG_04470","SJAG_00044","SJAG_00840","SJAG_00663","SJAG_03072","SJAG_01851","SJAG_01358","SJAG_03959","SJAG_01789","SJAG_02444","SJAG_02520","SJAG_01769","SJAG_00118","SJAG_02661","SJAG_05332","SJAG_04157"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76962,74002,94269,93539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019003"},{"annotations":[90705,117673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019002"},{"annotations":[76180,65286,60354,63610,69568,74511,79270,79713,105568,72791,110410,69482,115506,69978,62848,58299,57322,76170,119482,82171,63478,60481,78205,68165,59876,63764,70525,73447,62086,59065,80318,61020,72046,59279,71503,57274,79595,103133,58138,64757,62596,66381,68707,95242,64584,65897,59228,70653,70627,74281,81948,92915,97621,66853,75795,98142,58270,58189,61844,61505,67418,58183,67855,77631,79219,95295,96076,98380,106983,62539,63850,75049,71616,93766,67610,81920,60770,64058,81737,68941,67215,75164,74123,120969,65766,76959,120488,73999,79723,71068,75080,65298,65645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005525"}]},"cv_name":"molecular_function","definition":"Binding to a guanyl ribonucleotide, any compound consisting of guanosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl nucleotide binding","termid":"GO:0019001"},{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"}],"gene_count":95,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00044":null,"SJAG_00118":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00360":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00801":null,"SJAG_00840":null,"SJAG_00906":null,"SJAG_00968":null,"SJAG_00983":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01534":null,"SJAG_01558":null,"SJAG_01695":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01789":null,"SJAG_01851":null,"SJAG_01909":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02374":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02509":null,"SJAG_02520":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02604":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02661":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03188":null,"SJAG_03275":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_03959":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04233":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04366":null,"SJAG_04375":null,"SJAG_04387":null,"SJAG_04410":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04862":null,"SJAG_04874":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"guanyl ribonucleotide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0032561","terms_by_termid":{"GO:0005525":null,"GO:0019002":null,"GO:0019003":null}}


id: GO:0043918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cadaverine + S-adenosyl 3-(methylsulfanyl)propylamine = aminopropylcadaverine + H+ + S-methyl-5'-thioadenosine.","definition_xrefs":["PMID:17545282","RHEA:33387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cadaverine aminopropyltransferase activity","synonyms":[{"name":"cadaverine aminopropyl transferase activity","type":"exact"}],"termid":"GO:0043918"}


id: PBO:0057012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 103a-1","termid":"PBO:0057012"}


id: MONDO:1012197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular squamous cell carcinoma, non-human animal","termid":"MONDO:1011812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ocular squamous cell carcinoma, cattle","secondary_identifiers":["OMIA:000735-9913"],"termid":"MONDO:1012197","xrefs":{"Monarch":{"xref_id":"1012197"}}}


id: PBO:0087679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial inner membrane peptidase (IMP); IMP is required for maturation of mitochondrial proteins of the intermembrane space; Som1p facilitates cleavage of a subset of substrates; contains twin cysteine-x9-cysteine motifs","termid":"PBO:0087679"}


id: GO:0060859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of the directed movement of substances within a cell by a cellular process that begins with the formation of membrane-bounded vesicles in which the transported substances are enclosed or located in the vesicle membrane which are then targeted to, and fuse with, an acceptor membrane contributing to the shedding of a floral organ.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vesicle-mediated transport involved in floral organ abscission (obsolete GO:0060859)","termid":"GO:0060859"}


id: MONDO:0859233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa, junctional 6, with pyloric atresia","secondary_identifiers":["OMIM:619817","MEDGEN:1803348","UMLS:C5676957"],"termid":"MONDO:0859233","xrefs":{"Monarch":{"xref_id":"0859233"}}}


id: PBO:0082710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex; interacts with Spc110p at the spindle pole body (SPB) inner plaque and with Spc72p at the SPB outer plaque","termid":"PBO:0082710"}


id: GO:1900656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of diorcinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of diorcinol biosynthetic process","termid":"GO:1900655"},{"relation_name":"negatively_regulates","term_name":"diorcinol biosynthetic process","termid":"GO:1900572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of diorcinol biosynthetic process","synonyms":[{"name":"down regulation of diorcinol anabolism","type":"exact"},{"name":"down regulation of diorcinol biosynthesis","type":"exact"},{"name":"down regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down regulation of diorcinol formation","type":"exact"},{"name":"down regulation of diorcinol synthesis","type":"exact"},{"name":"down-regulation of diorcinol anabolism","type":"exact"},{"name":"down-regulation of diorcinol biosynthesis","type":"exact"},{"name":"down-regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down-regulation of diorcinol formation","type":"exact"},{"name":"down-regulation of diorcinol synthesis","type":"exact"},{"name":"downregulation of diorcinol anabolism","type":"exact"},{"name":"downregulation of diorcinol biosynthesis","type":"exact"},{"name":"downregulation of diorcinol biosynthetic process","type":"exact"},{"name":"downregulation of diorcinol formation","type":"exact"},{"name":"downregulation of diorcinol synthesis","type":"exact"},{"name":"inhibition of diorcinol anabolism","type":"exact"},{"name":"inhibition of diorcinol biosynthesis","type":"exact"},{"name":"inhibition of diorcinol biosynthetic process","type":"narrow"},{"name":"inhibition of diorcinol formation","type":"exact"},{"name":"inhibition of diorcinol synthesis","type":"exact"},{"name":"negative regulation of diorcinol anabolism","type":"exact"},{"name":"negative regulation of diorcinol biosynthesis","type":"exact"},{"name":"negative regulation of diorcinol formation","type":"exact"},{"name":"negative regulation of diorcinol synthesis","type":"exact"}],"termid":"GO:1900656"}


id: MONDO:0000711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyotrophic lateral sclerosis type 13 (obsolete MONDO:0000711)","termid":"MONDO:0000711","xrefs":{"Monarch":{"xref_id":"0000711"}}}


id: MONDO:1011050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in markhor.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, markhor","secondary_identifiers":["OMIA:000807-48167"],"termid":"MONDO:1011050","xrefs":{"Monarch":{"xref_id":"1011050"}}}


id: GO:1904572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:19716792"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA binding (obsolete GO:1904572)","synonyms":[{"name":"down regulation of mRNA binding","type":"exact"},{"name":"down-regulation of mRNA binding","type":"exact"},{"name":"downregulation of mRNA binding","type":"exact"},{"name":"inhibition of mRNA binding","type":"narrow"}],"termid":"GO:1904572"}


id: MONDO:0023757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meralgia paresthetica is a condition characterized by tingling, numbness and burning pain in the outer thigh. These symptoms may become worse after walking or standing. The condition generally only affects one side of the body, although both sides may be involved in up to 20% of cases. Meralgia paresthetica is caused by compression of the lateral femoral cutaneous nerve (a sensory nerve to the skin on the outer thigh). This may be associated with a variety of causes such as tight clothing, obesity, and/or pregnancy. Treatment is based on the signs and symptoms present in each person and may include medications to manage pain. In most cases, conservative treatment by wearing looser clothing and/or losing weight generally resolves symptoms.","definition_xrefs":["GARD:0009417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve compression syndrome","termid":"MONDO:0003615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"meralgia paresthetica","secondary_identifiers":["MESH:C537458","SCTID:85007004","ICD9:355.1","UMLS:C0152110","MEDGEN:101817","GARD:9417"],"synonyms":[{"name":"Bernhardt-Roth syndrome","type":"related"},{"name":"bernhardt's paresthesia","type":"related"},{"name":"bernhardt-rot syndrome","type":"related"},{"name":"compression of lateral cutaneous femoral nerve of thigh","type":"related"},{"name":"entrapment of lateral cutaneous nerve of thigh","type":"related"},{"name":"lateral cutaneous femoral nerve of thigh syndrome","type":"related"},{"name":"lateral femoral cutaneous nerve entrapment","type":"related"},{"name":"meralgia paraesthetica familial (type)","type":"related"}],"termid":"MONDO:0023757","xrefs":{"Monarch":{"xref_id":"0023757"}}}


id: GO:0007248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Movement of a MAP kinase to the nucleus in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK (mating sensu Saccharomyces) (obsolete GO:0007248)","synonyms":[{"name":"nuclear translocation of MAPK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007248"}


id: MONDO:0014213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"intellectual disability-feeding difficulties-developmental delay-microcephaly syndrome","secondary_identifiers":["MEDGEN:816016","DOID:0070051","OMIM:615502","GARD:17566","Orphanet:363611","UMLS:C3809686"],"synonyms":[{"name":"MRD21","type":"exact"},{"name":"autosomal dominant intellectual disability 21","type":"exact"},{"name":"autosomal dominant mental retardation 21","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 21","type":"related"},{"name":"intellectual disability, autosomal dominant 21","type":"related"},{"name":"intellectual disability, autosomal dominant type 21","type":"exact"},{"name":"mental retardation, autosomal dominant 21","type":"related"},{"name":"mental retardation, autosomal dominant type 21","type":"exact"}],"termid":"MONDO:0014213","xrefs":{"Monarch":{"xref_id":"0014213"}}}


id: GO:0007040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole organization","termid":"GO:0080171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysosome organization","synonyms":[{"name":"lysosome organisation","type":"exact"},{"name":"lysosome organization and biogenesis","type":"related"}],"termid":"GO:0007040"}


id: FYPO:0005193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of torin1 than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to torin1","synonyms":[{"name":"resistance to torin 1","type":"exact"},{"name":"resistance to torin1 during mitotic cell cycle","type":"related"},{"name":"resistance to torin1 during vegetative growth","type":"exact"},{"name":"resistant to torin1","type":"exact"}],"termid":"FYPO:0005193"}


id: MONDO:0012267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A holoprosencephaly that has material basis in variation in the chromosome region 14q13.","definition_xrefs":["DOID:0110879","PMID:15820313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 8","secondary_identifiers":["OMIM:609408","MESH:C563723","MEDGEN:322873","UMLS:C1836254"],"synonyms":[{"name":"HPE8","type":"exact"},{"name":"holoprosencephaly 8","type":"exact"},{"name":"holoprosencephaly type 8","type":"exact"}],"termid":"MONDO:0012267","xrefs":{"Monarch":{"xref_id":"0012267"}}}


id: PBO:0062256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 3 pseudogene","termid":"PBO:0062256"}


id: GO:0003870
data:
  {"annotated_genes":["SJAG_03961","SJAG_00097"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71700,80264],"is_not":false,"summary":null,"term":"GO:0003870"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + H+ + succinyl-CoA = 5-aminolevulinate + CO2 + CoA.","definition_xrefs":["RHEA:12921","EC:2.3.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-succinyltransferase activity","termid":"GO:0016749"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_03961":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"5-aminolevulinate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-189442","MetaCyc:5-AMINOLEVULINIC-ACID-SYNTHASE-RXN","KEGG_REACTION:R00830"],"synonyms":[{"name":"5-aminolevulinate synthetase activity","type":"related"},{"name":"5-aminolevulinic acid synthase activity","type":"related"},{"name":"5-aminolevulinic acid synthetase activity","type":"related"},{"name":"ALA synthase activity","type":"related"},{"name":"ALA synthetase activity","type":"related"},{"name":"ALAS activity","type":"related"},{"name":"alpha-aminolevulinic acid synthase activity","type":"related"},{"name":"aminolevulinate synthase activity","type":"related"},{"name":"aminolevulinate synthetase activity","type":"related"},{"name":"aminolevulinic acid synthase activity","type":"related"},{"name":"aminolevulinic acid synthetase activity","type":"related"},{"name":"aminolevulinic synthetase activity","type":"related"},{"name":"delta-ALA synthetase activity","type":"related"},{"name":"delta-aminolevulinate synthase activity","type":"related"},{"name":"delta-aminolevulinate synthetase activity","type":"related"},{"name":"delta-aminolevulinic acid synthase activity","type":"related"},{"name":"delta-aminolevulinic acid synthetase activity","type":"related"},{"name":"delta-aminolevulinic synthetase activity","type":"related"},{"name":"succinyl-CoA:glycine C-succinyltransferase (decarboxylating)","type":"related"}],"termid":"GO:0003870","terms_by_termid":{"GO:0003870":null}}


id: GO:0106439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-lysine(out) + L-arginine(in) = L-lysine(in) + L-arginine(out).","definition_xrefs":["PMID:10903140","RHEA:70827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"L-arginine transmembrane transporter activity","termid":"GO:0061459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-lysine:L-arginine antiporter activity","termid":"GO:0106439"}


id: GO:0102667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-O-(indol-3-ylacetyl)-beta-D-glucose + H2O = H+ + indole-3-acetate + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-beta-1-D-glucose hydrolase activity (obsolete GO:0102667)","termid":"GO:0102667"}


id: MONDO:0956971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic asthma that is characterized by severity with symptoms two or fewer days per week, nighttime awakenings two or fewer times per month, use of short-acting beta agonist for symptom control two or fewer days per week and no interference with normal activity.","definition_xrefs":["DOID:0080812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic asthma","termid":"MONDO:0850282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermittent asthma","secondary_identifiers":["MEDGEN:740576","UMLS:C1740754"],"termid":"MONDO:0956971","xrefs":{"Monarch":{"xref_id":"0956971"}}}


id: GO:0046163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of heme C, a derivative of heme found in cytochromes c, b4, and f.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"heme C metabolic process","termid":"GO:0046162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme C catabolic process","synonyms":[{"name":"haem C catabolic process","type":"exact"},{"name":"haem C catabolism","type":"exact"},{"name":"heme C breakdown","type":"exact"},{"name":"heme C catabolism","type":"exact"},{"name":"heme C degradation","type":"exact"}],"termid":"GO:0046163"}


id: PR:P05734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1901 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L19-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.02","synonyms":[{"name":"Spom972h-rpl1901","type":"exact"},{"name":"YL15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05734"}


id: PBO:0055790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 1","termid":"PBO:0055790"}


id: MONDO:1012386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"recurrent airway obstruction, non-human animal","termid":"MONDO:1011930"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent airway obstruction, horse","secondary_identifiers":["OMIA:001456-9796"],"termid":"MONDO:1012386","xrefs":{"Monarch":{"xref_id":"1012386"}}}


id: MONDO:1012114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypomyelinogenesis, non-human animal","termid":"MONDO:1011845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, dog","secondary_identifiers":["OMIA:000527-9615"],"termid":"MONDO:1012114","xrefs":{"Monarch":{"xref_id":"1012114"}}}


id: GO:1901018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of potassium ion transmembrane transporter activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transport","termid":"GO:1901381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of potassium ion transmembrane transporter activity","synonyms":[{"name":"activation of potassium ion transmembrane transporter activity","type":"narrow"},{"name":"activation of potassium transporter activity","type":"exact"},{"name":"positive regulation of potassium transporter activity","type":"exact"},{"name":"up regulation of potassium ion transmembrane transporter activity","type":"exact"},{"name":"up regulation of potassium transporter activity","type":"exact"},{"name":"up-regulation of potassium ion transmembrane transporter activity","type":"exact"},{"name":"up-regulation of potassium transporter activity","type":"exact"},{"name":"upregulation of potassium ion transmembrane transporter activity","type":"exact"},{"name":"upregulation of potassium transporter activity","type":"exact"}],"termid":"GO:1901018"}


id: MONDO:0007024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the species yersinia pseudotuberculosis.","definition_xrefs":["MESH:D015012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Yersinia infectious disease","termid":"MONDO:0007023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yersinia pseudotuberculosis infectious disease","secondary_identifiers":["SCTID:36753006","MEDGEN:12190","EFO:1001246","UMLS:C0043410"],"synonyms":[{"name":"Pasteurella Pseudotuberculoses","type":"related"},{"name":"Pasteurella pseudotuberculosis","type":"related"},{"name":"Pseudotuberculoses, Pasteurella","type":"related"},{"name":"infection by Pasteurella pseudotuberculosis","type":"related"},{"name":"infection by Yersinia pseudotuberculosis","type":"related"},{"name":"infections, Yersinia pseudotuberculosis","type":"exact"},{"name":"pseudotuberculosis","type":"exact"},{"name":"pseudotuberculosis, Pasteurella","type":"related"}],"termid":"MONDO:0007024","xrefs":{"Monarch":{"xref_id":"0007024"}}}


id: PBO:0054781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2194","termid":"PBO:0054781"}


id: PBO:0028125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_agglutination","termid":"PBO:0028125"}


id: PBO:0005196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate kinase/inositol pyrophosphate synthase (predicted)","termid":"PBO:0005196"}


id: GO:1902015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(glucopyranosyl N-acetylgalactosamine 1-phosphate) teichoic acid.","definition_xrefs":["PMID:16735734","GOC:TermGenie","UniPathway:UPA00789","UniPathway:UPA00828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(glucopyranosyl N-acetylgalactosamine 1-phosphate) teichoic acid metabolic process","synonyms":[{"name":"poly(glucopyranosyl N-acetylgalactosamine 1-phosphate) teichoic acid metabolism","type":"exact"},{"name":"poly(glucosyl N-acetylgalactosamine 1-phosphate) teichoic acid metabolic process","type":"exact"},{"name":"poly(glucosyl N-acetylgalactosamine 1-phosphate) teichoic acid metabolism","type":"exact"}],"termid":"GO:1902015"}


id: GO:0046901
data:
  {"annotated_genes":["SJAG_03224","SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69992,73968],"is_not":false,"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetrahydrofolylpolyglutamate, a folate derivative comprising tetrahydrofolate attached to a chain of glutamate residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"tetrahydrofolylpolyglutamate metabolic process","termid":"GO:0046900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_03224":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0042559","GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolylpolyglutamate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"THF polyglutamylation","type":"exact"},{"name":"folic acid-containing compound polyglutamylation","type":"broad"},{"name":"tetrahydrofolate polyglutamylation","type":"exact"},{"name":"tetrahydrofolyl-[Glu](n) biosynthesis","type":"exact"},{"name":"tetrahydrofolyl-[Glu](n) biosynthetic process","type":"exact"},{"name":"tetrahydrofolylpolyglutamate anabolism","type":"exact"},{"name":"tetrahydrofolylpolyglutamate biosynthesis","type":"exact"},{"name":"tetrahydrofolylpolyglutamate formation","type":"exact"},{"name":"tetrahydrofolylpolyglutamate synthesis","type":"exact"}],"termid":"GO:0046901","terms_by_termid":{"GO:0046901":null}}


id: PBO:0078179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-3","termid":"PBO:0078179"}


id: FYPO:0006788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A)-specific ribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased ribonuclease activity","termid":"FYPO:0003822"},{"relation_name":"is_a","term_name":"abnormal poly(A)-specific ribonuclease activity","termid":"FYPO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased poly(A)-specific ribonuclease activity","synonyms":[{"name":"reduced poly(A)-specific ribonuclease activity","type":"exact"}],"termid":"FYPO:0006788"}


id: PBO:0048427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine amidotransferase class 1 domain containing 3","termid":"PBO:0048427"}


id: PBO:0085025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitric oxide oxidoreductase; flavohemoglobin that plays role in oxidative and nitrosative stress responses; protects against nitration of cellular targets and against cell growth inhibition under aerobic or anaerobic conditions; yeast flavohemoglobin Yhb1p and human homolog neuroglobin NGB protect cells against alpha-synuclein cytotoxicity and aggregate formation; protein increases in abundance, relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0085025"}


id: MONDO:0044874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common subtype of the myelodysplastic syndromes affecting children. It is characterized by persistent cytopenia with less than 5% blasts in the bone marrow and less than 2% blasts in the peripheral blood.","definition_xrefs":["NCIT:C82596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractory hematologic cancer","termid":"MONDO:0004111"},{"relation_name":"is_a","term_name":"childhood myelodysplastic syndrome","termid":"MONDO:0044873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"refractory cytopenia of childhood","secondary_identifiers":["MEDGEN:417430","UMLS:C2826323","icd11.foundation:699075426","ONCOTREE:RCYC"],"synonyms":[{"name":"RCC","type":"exact"},{"name":"refractory cytopenia of childhood","type":"exact"}],"termid":"MONDO:0044874","xrefs":{"Monarch":{"xref_id":"0044874"}}}


id: GO:0075250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"},{"relation_name":"is_a","term_name":"regulation of aeciospore formation","termid":"GO:0075248"},{"relation_name":"negatively_regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aeciospore formation","termid":"GO:0075250"}


id: MONDO:0004397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma that arises from the posterior mediastinum. It is characterized by the presence of psammoma bodies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinal schwannoma","termid":"MONDO:0004398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign mediastinal psammomatous neurilemmoma","secondary_identifiers":["NCIT:C6636","MEDGEN:231937","DOID:7921","UMLS:C1332513"],"synonyms":[{"name":"benign mediastinal psammomatous schwannoma","type":"exact"},{"name":"benign psammomatous neurilemmoma of mediastinum","type":"exact"},{"name":"benign psammomatous neurilemmoma of the mediastinum","type":"exact"},{"name":"benign psammomatous schwannoma of mediastinum","type":"exact"},{"name":"benign psammomatous schwannoma of the mediastinum","type":"exact"}],"termid":"MONDO:0004397","xrefs":{"Monarch":{"xref_id":"0004397"}}}


id: MONDO:0003221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sclerosing hemangioma (obsolete MONDO:0003221)","termid":"MONDO:0003221","xrefs":{"Monarch":{"xref_id":"0003221"}}}


id: GO:0140169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3alpha-hydroxysteroid + NAD(P)+ = a 3-oxosteroid + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-alpha-hydroxysteroid 3-dehydrogenase [NAD(P)+] activity","termid":"GO:0140169"}


id: PBO:0073917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A6 pseudogene 1","termid":"PBO:0073917"}


id: GO:0043501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which skeletal muscles change their phenotypic profiles in response to altered functional demands and a variety of signals.","definition_xrefs":["PMID:11181628","PMID:12605307","PMID:11449884","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle adaptation","termid":"GO:0014888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle adaptation","synonyms":[{"name":"skeletal muscle plasticity","type":"related"}],"termid":"GO:0043501"}


id: PBO:0063708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 2 like 1","termid":"PBO:0063708"}


id: GO:0021638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the trigeminal nerve. This process pertains to the initial formation of a structure from unspecified parts. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"trigeminal nerve morphogenesis","termid":"GO:0021636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal nerve formation","synonyms":[{"name":"CN V biosynthesis","type":"related"},{"name":"CN V formation","type":"related"}],"termid":"GO:0021638"}


id: GO:0033015
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"tetrapyrrole catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrapyrrole breakdown","type":"exact"},{"name":"tetrapyrrole catabolism","type":"exact"},{"name":"tetrapyrrole degradation","type":"exact"}],"termid":"GO:0033015","terms_by_termid":{"GO:0042167":null}}


id: FYPO:0002202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and the cell diameter is larger than normal and the cell length is shorter than normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable stubby vegetative cell population (obsolete FYPO:0002202)","synonyms":[{"name":"stubby inviable vegetative cell population","type":"exact"}],"termid":"FYPO:0002202"}


id: PBO:0057256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 483","termid":"PBO:0057256"}


id: MONDO:0030692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 95","secondary_identifiers":["OMIM:619773","UMLS:C5676929","MEDGEN:1802205"],"synonyms":[{"name":"IMD95","type":"exact"},{"name":"immunodeficiency 95","type":"exact"}],"termid":"MONDO:0030692","xrefs":{"Monarch":{"xref_id":"0030692"}}}


id: GO:0052878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + linoleate = (8R,9Z,12Z)-8-hydroperoxyoctadeca-9,12-dienoate.","definition_xrefs":["RHEA:25395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"linoleate 8R-lipoxygenase activity","secondary_identifiers":["EC:1.13.11.60","KEGG_REACTION:R07061","MetaCyc:RXN-12756"],"synonyms":[{"name":"5,8-LDS (bifunctional enzyme) activity","type":"related"},{"name":"5,8-linoleate diol synthase (bifunctional enzyme) activity","type":"related"},{"name":"7,8-LDS (bifunctional enzyme) activity","type":"related"},{"name":"7,8-linoleate diol synthase (bifunctional enzyme) activity","type":"related"},{"name":"linoleate diol synthase activity","type":"related"}],"termid":"GO:0052878"}


id: FYPO:0002606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at ribosomal DNA during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation at rDNA during vegetative growth","termid":"FYPO:0002604"},{"relation_name":"is_a","term_name":"increased protein phosphorylation during mitotic S phase","termid":"FYPO:0004353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase","synonyms":[{"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at ribosomal DNA during mitotic S phase","type":"exact"}],"termid":"FYPO:0002606"}


id: PBO:0044552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein kinase 3","termid":"PBO:0044552"}


id: SO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to an EST or cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_match","synonyms":[{"name":"expressed sequence match","type":"exact"}],"termid":"SO:0000102"}


id: MONDO:0044238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lunulae of fingernails (obsolete MONDO:0044238)","secondary_identifiers":["OMIM:152600"],"synonyms":[{"name":"lunulae of fingernails","type":"related"}],"termid":"MONDO:0044238","xrefs":{"Monarch":{"xref_id":"0044238"}}}


id: MONDO:0859171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Luo-Schoch-Yamamoto syndrome","secondary_identifiers":["OMIM:619460","DOID:0070416","UMLS:C5561946","MEDGEN:1794156"],"termid":"MONDO:0859171","xrefs":{"Monarch":{"xref_id":"0859171"}}}


id: PR:O94301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hfi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator hfi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.18c","synonyms":[{"name":"Spom972h-hfi1","type":"exact"}],"termid":"PR:O94301"}


id: PBO:0061833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 1 pseudogene 1","termid":"PBO:0061833"}


id: PBO:0085197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Osmotic stress-responsive phosphorelay intermediate sensor protein; phosphorylated by the plasma membrane sensor Sln1p in response to osmotic stress and then in turn phosphorylates the response regulators Ssk1p in the cytosol and Skn7p in the nucleus","termid":"PBO:0085197"}


id: FYPO:0006035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitochondrial membrane potential, i.e. the electric potential existing across the mitochondrial membrane, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:14767070","PomBase:mah","GO:0051881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitochondrial membrane potential","synonyms":[{"name":"normal mitochondrial membrane polarization","type":"exact"},{"name":"normal mitochondrial membrane potential during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial membrane potential during vegetative growth","type":"exact"}],"termid":"FYPO:0006035"}


id: PBO:0116222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, UPF0047 family, implicated in thiamine or TPP metabolism","termid":"PBO:0116222"}


id: MONDO:0800447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, platelet-type, 13, susceptibility to","secondary_identifiers":["OMIM:614009","UMLS:C3279614","MEDGEN:481244"],"synonyms":[{"name":"BDPLT13","type":"exact"},{"name":"bleeding disorder, platelet-type, 13, susceptibility to","type":"exact"},{"name":"bleeding disorder, susceptibility to, due to defective platelet thromboxane A2 receptor","type":"exact"},{"name":"susceptibility to platelet-type bleeding disorder 13","type":"exact"}],"termid":"MONDO:0800447","xrefs":{"Monarch":{"xref_id":"0800447"}}}


id: GO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Movement of a MAP kinase to the nucleus in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK (pseudohyphal growth) (obsolete GO:0000195)","synonyms":[{"name":"nuclear translocation of MAPK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000195"}


id: MONDO:0030063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures, hypotonia, and brain imaging abnormalities","secondary_identifiers":["UMLS:C5394517","MEDGEN:1708579","OMIM:618922","GARD:18524"],"synonyms":[{"name":"NEDSHBA","type":"exact"},{"name":"NEURODEVELOPMENTAL DISORDER WITH SEIZURES, HYPOTONIA, AND BRAIN IMAGING ABNORMALITIES","type":"exact"},{"name":"neurodevelopmental disorder with seizures, hypotonia, and brain abnormalities","type":"exact"},{"name":"neurodevelopmental disorder with seizures, hypotonia, and brain imaging abnormalities","type":"exact"}],"termid":"MONDO:0030063","xrefs":{"Monarch":{"xref_id":"0030063"}}}


id: FYPO:0001658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of valine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal valine import","synonyms":[{"name":"abnormal L-valine import","type":"exact"},{"name":"abnormal L-valine import across plasma membrane","type":"exact"},{"name":"abnormal valine import during mitotic cell cycle","type":"related"},{"name":"abnormal valine import during vegetative growth","type":"exact"},{"name":"abnormal valine import into cell","type":"exact"},{"name":"abnormal valine uptake","type":"exact"}],"termid":"FYPO:0001658"}


id: MONDO:0021804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tuberculosis caused by the infection of Mycobacterium tuberculosis in patients with silicosis (that is caused by inhalation of silica dust particles). The risk of a patient with silicosis developing pulmonary tuberculosis and extra-pulmonary tuberculosis is higher than in healthy population.","definition_xrefs":["PMID:26175823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silicosis","termid":"MONDO:0005960"},{"relation_name":"is_a","term_name":"pulmonary tuberculosis","termid":"MONDO:0006052"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silicotuberculosis","secondary_identifiers":["MESH:D012830","SCTID:233763009","UMLS:C0037118","ICD9:502","MEDGEN:11426"],"synonyms":[{"name":"silicotuberculoses","type":"exact"},{"name":"silicotuberculosis","type":"exact"}],"termid":"MONDO:0021804","xrefs":{"Monarch":{"xref_id":"0021804"}}}


id: PBO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6 umil/min/mg","termid":"PBO:0001494"}


id: PBO:0063628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 4","termid":"PBO:0063628"}


id: PBO:0078431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-1","termid":"PBO:0078431"}


id: GO:0061872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of a hepatic stellate cell.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic stellate cell contraction","termid":"GO:0061872"}


id: PBO:0062964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 7","termid":"PBO:0062964"}


id: GO:1903978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglial cell activation.","definition_xrefs":["GOC:BHF","GOC:nc","GO_REF:0000058","GOC:TermGenie","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage activation","termid":"GO:0043030"},{"relation_name":"is_a","term_name":"regulation of neuroinflammatory response","termid":"GO:0150077"},{"relation_name":"regulates","term_name":"microglial cell activation","termid":"GO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglial cell activation","termid":"GO:1903978"}


id: PR:P87057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nhp6 gene.","definition_xrefs":["UniProtKB:P87057","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-histone chromosomal protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.09c","synonyms":[{"name":"Spom972h-nhp6","type":"exact"}],"termid":"PR:P87057"}


id: PBO:0083577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps YFR035C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083577"}


id: MONDO:1011953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, non-human animal","secondary_identifiers":["OMIA:000937"],"termid":"MONDO:1011953","xrefs":{"Monarch":{"xref_id":"1011953"}}}


id: PBO:0039196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member A1","termid":"PBO:0039196"}


id: PBO:0042407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC20 divergent transcript","termid":"PBO:0042407"}


id: GO:0060140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation in a cell that has been targeted by a virus of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of syncytium formation via plasma membrane fusion (obsolete GO:0060140)","termid":"GO:0060140"}


id: MONDO:0018336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Silver-Russell syndrome due to a point mutation (obsolete MONDO:0018336)","secondary_identifiers":["Orphanet:397590"],"termid":"MONDO:0018336","xrefs":{"Monarch":{"xref_id":"0018336"}}}


id: PBO:0054810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2223","termid":"PBO:0054810"}


id: GO:1902882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to oxidative stress.","definition_xrefs":["PMID:16899554","GOC:kmv","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to oxidative stress","termid":"GO:1902882"}


id: GO:0034615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses GTP cyclohydrolase I activity. In E. coli and human, the complex is a homodecamer, and monomers are catalytically inactive.","definition_xrefs":["PMID:16696853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GCH1 complex","synonyms":[{"name":"GTP cyclohydrolase I complex","type":"exact"}],"termid":"GO:0034615"}


id: GO:1902619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of microtubule minus-end binding.","definition_xrefs":["PMID:22939623","GO_REF:0000059","GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule minus-end binding (obsolete GO:1902619)","termid":"GO:1902619"}


id: GO:1905312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis.","definition_xrefs":["GOC:rl","GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:17628518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:1905310"},{"relation_name":"positively_regulates","term_name":"cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","synonyms":[{"name":"activation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"up-regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"upregulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:1905312"}


id: PBO:0077152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 3A","termid":"PBO:0077152"}


id: MONDO:0859516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures, spasticity, and complete or partial agenesis of the corpus callosum","secondary_identifiers":["MEDGEN:1840932","UMLS:C5830296","OMIM:620250"],"termid":"MONDO:0859516","xrefs":{"Monarch":{"xref_id":"0859516"}}}


id: PBO:0062764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily R member 1","termid":"PBO:0062764"}


id: GO:0008335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the structural integrity of the ring canals connecting the female germline cyst.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"ovarian nurse cell to oocyte transport","termid":"GO:0007300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0006810","GO:0030036"],"is_obsolete":false,"name":"female germline ring canal stabilization","synonyms":[{"name":"nurse cell ring canal stabilization","type":"narrow"},{"name":"ovarian ring canal stabilization","type":"narrow"}],"termid":"GO:0008335"}


id: PBO:0003572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U14","termid":"PBO:0003572"}


id: PBO:0034619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_biological_process","termid":"PBO:0034619"}


id: PR:W6JQK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC651.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:W6JQK2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPBC651.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.07","synonyms":[{"name":"Spom972h-SPBC651.07","type":"exact"}],"termid":"PR:W6JQK2"}


id: FYPO:0003346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is abnormal at the silent mating-type cassettes. Meiotic recombination is a cellular process in which double strand breaks are formed and repaired through a double Holliday junction intermediate, resulting in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes.","definition_xrefs":["GO:0007131","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"abnormal meiotic recombination at silent mating-type cassette","synonyms":[{"name":"DNA recombination defects, meiotic, at silent mating-type cassette","type":"exact"},{"name":"abnormal meiotic DNA recombination at silent mating-type cassette","type":"exact"},{"name":"abnormal meiotic recombination at mating-type region heterochromatin","type":"exact"},{"name":"abnormal reciprocal meiotic recombination at silent mating-type cassette","type":"exact"},{"name":"abnormal recombination at silent mating-type cassette","type":"broad"}],"termid":"FYPO:0003346"}


id: GO:0060534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the tracheal cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage development","termid":"GO:0051216"},{"relation_name":"part_of","term_name":"trachea development","termid":"GO:0060438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea cartilage development","termid":"GO:0060534"}


id: PBO:0060586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 25, pseudogene","termid":"PBO:0060586"}


id: PBO:0057483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 601","termid":"PBO:0057483"}


id: GO:0016997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-glycosidic linkages in oligo- or poly(sialic) acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-sialidase activity","termid":"GO:0016997"}


id: GO:0050066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine = (3S)-3,6-diaminohexanoate.","definition_xrefs":["RHEA:19177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"L-lysine 2,3-aminomutase activity","secondary_identifiers":["EC:5.4.3.2","KEGG_REACTION:R00461","MetaCyc:LYSINE-23-AMINOMUTASE-RXN"],"synonyms":[{"name":"lysine 2,3-aminomutase activity","type":"related"}],"termid":"GO:0050066"}


id: PBO:0041801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 10","termid":"PBO:0041801"}


id: PBO:0079685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitination factor E4B","termid":"PBO:0079685"}


id: GO:1900204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in metanephric collecting duct development.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","GOC:TermGenie","PMID:17314325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephric collecting duct development","termid":"GO:0072205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900204"}


id: GO:0010683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tricyclic triterpenoid compounds, terpenoids with six isoprene units and 3 rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tricyclic triterpenoid metabolic process","synonyms":[{"name":"tricyclic triterpenoid metabolism","type":"exact"}],"termid":"GO:0010683"}


id: FYPO:0007976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during anaphase B in which the duration of interpolar microtubule growth events is longer.","definition_xrefs":["PMID:35293864","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal duration of microtubule growth event","termid":"FYPO:0007956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of interpolar microtubule growth events during anaphase B","termid":"FYPO:0007976"}


id: PBO:0038731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 2, smooth muscle","termid":"PBO:0038731"}


id: FYECO:0000249
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which copper(II) sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CuSO4","synonyms":[{"name":"+ copper(II) sulfate","type":"exact"}],"termid":"FYECO:0000249"}


id: FYPO:0005926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G1 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level during mitotic G1 phase","synonyms":[{"name":"normal protein accumulation during mitotic G1 phase","type":"related"},{"name":"normal protein level during G1 phase of mitotic cell cycle","type":"related"},{"name":"normal protein level during mitotic G1 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0005926"}


id: MOD:00703
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20) group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated residue","termid":"MOD:00001"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"isoprenylated residue","synonyms":[{"name":"IpRes","type":"exact"}],"termid":"MOD:00703"}


id: PBO:0111350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophismin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani1/Fkbp39","termid":"PBO:0111350"}


id: GO:0090266
data:
  {"annotated_genes":["SJAG_03681","SJAG_01679","SJAG_02336","SJAG_02451","SJAG_03126","SJAG_01297","SJAG_01837","SJAG_04259","SJAG_00883","SJAG_03353","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105796,117883,101468,92549,113924,110193,109161,115755,116248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[96044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[118661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic nuclear division","termid":"GO:0007088"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid separation","termid":"GO:0010965"},{"relation_name":"is_a","term_name":"regulation of mitotic metaphase/anaphase transition","termid":"GO:0030071"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid segregation","termid":"GO:0033047"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle checkpoint","termid":"GO:1903504"},{"relation_name":"regulates","term_name":"mitotic spindle assembly checkpoint signaling","termid":"GO:0007094"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0044772","GO:0008150","GO:0007049","GO:0000070","GO:0023052"],"is_obsolete":false,"name":"regulation of mitotic cell cycle spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090266","terms_by_termid":{"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: MONDO:0011377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the SCN5A gene, encoding sodium channel protein type 5 subunit alpha. It is characterized by a prolonged QT interval that may result in torsade de pointes, ventricular fibrillation and/or sudden cardiac death.","definition_xrefs":["NCIT:C137959"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 3","secondary_identifiers":["MEDGEN:349087","DOID:0110646","GARD:3286","OMIM:603830","UMLS:C1859062","MESH:C565840"],"synonyms":[{"name":"LQT3","type":"exact"},{"name":"SCN5A long QT syndrome","type":"exact"},{"name":"long QT syndrome 2/3, digenic","type":"related"},{"name":"long QT syndrome 3","type":"exact"},{"name":"long QT syndrome 3, acquired, susceptibility to","type":"related"},{"name":"long QT syndrome 3/6, digenic","type":"related"},{"name":"long QT syndrome caused by mutation in SCN5A","type":"exact"},{"name":"long QT syndrome type 3","type":"exact"}],"termid":"MONDO:0011377","xrefs":{"Monarch":{"xref_id":"0011377"}}}


id: PBO:0071646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 10","termid":"PBO:0071646"}


id: FYPO:0006062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which one septin ring assembles in the normal location, but one or more additional septin rings also form in abnormal locations.","definition_xrefs":["PMID:15385632","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septin ring assembly during vegetative growth","termid":"FYPO:0006061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"ectopic septin ring assembly during vegetative growth","synonyms":[{"name":"ectopic septin ring assembly during mitotic cell cycle","type":"related"},{"name":"ectopic septin ring formation during vegetative growth","type":"exact"}],"termid":"FYPO:0006062"}


id: MONDO:0011952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 7","secondary_identifiers":["DOID:0060199","MEDGEN:334136","MESH:C564300","OMIM:608031","UMLS:C1842674","GARD:10500"],"synonyms":[{"name":"ALS7","type":"exact"},{"name":"amyotrophic lateral sclerosis 7","type":"exact"}],"termid":"MONDO:0011952","xrefs":{"Monarch":{"xref_id":"0011952"}}}


id: GO:0120237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a terminal acetylenic compound, a compound which contains a terminal alkyne moiety in which a carbon of the carbon-carbon triple bond (aka C#C) moiety is attached to a hydrogen atom.","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal acetylenic compound metabolic process","termid":"GO:0120244"},{"relation_name":"is_a","term_name":"acetylenic compound biosynthetic process","termid":"GO:0120247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal acetylenic compound biosynthetic process","synonyms":[{"name":"terminal alkyne substituted compound anabolic process","type":"exact"},{"name":"terminal alkyne substituted compound anabolism","type":"exact"},{"name":"terminal alkyne substituted compound biosynthesis","type":"exact"},{"name":"terminal alkyne substituted compound biosynthetic process","type":"exact"},{"name":"terminal alkyne substituted compound synthesis","type":"exact"}],"termid":"GO:0120237"}


id: PBO:0039002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"afadin, adherens junction formation factor","termid":"PBO:0039002"}


id: PBO:0042631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 6 pseudogene","termid":"PBO:0042631"}


id: MONDO:0002961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acanthoma","termid":"MONDO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"large cell acanthoma","secondary_identifiers":["UMLS:C1334362","DOID:4321","NCIT:C27518","MEDGEN:235249"],"termid":"MONDO:0002961","xrefs":{"Monarch":{"xref_id":"0002961"}}}


id: GO:0060889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a limb epidermal basal cell. A epidermal basal cell cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into more specialized cell of the limb epidermis.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal cell differentiation","termid":"GO:0009913"},{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"},{"relation_name":"part_of","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb basal epidermal cell differentiation","termid":"GO:0060889"}


id: GO:0071926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an endocannabinoid binding to a cell surface receptor. The pathway proceeds with the receptor transmitting the signal to a heterotrimeric G-protein complex and ends with regulation of a downstream cellular process, e.g. transcription. Endocannabinoids are small molecules derived from arachidonic acid, anandamide (arachidonoylethanolamide) and 2-arachidonoylglycerol.","definition_xrefs":["GOC:bf","GOC:mah","PMID:15550444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid signaling pathway","termid":"GO:0038171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endocannabinoid signaling pathway","synonyms":[{"name":"endocannabinoid signalling pathway","type":"exact"}],"termid":"GO:0071926"}


id: PBO:0024816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of","termid":"PBO:0024816"}


id: MONDO:1010747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in domestic cats in which the cause of the disease is a mutation in the ADAMTS2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, domestic cat","termid":"MONDO:1011494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, dermatosparaxis type, ADAMTS2-related, domestic cat","secondary_identifiers":["OMIA:000328-9685"],"synonyms":[{"name":"dEDS","type":"exact"}],"termid":"MONDO:1010747","xrefs":{"Monarch":{"xref_id":"1010747"}}}


id: MONDO:1012105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"internal hydrocephalus, non-human animal","termid":"MONDO:1011843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal hydrocephalus, dog","secondary_identifiers":["OMIA:000489-9615"],"termid":"MONDO:1012105","xrefs":{"Monarch":{"xref_id":"1012105"}}}


id: MONDO:0002417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ethmoid sinus adenoid cystic carcinoma (obsolete MONDO:0002417)","termid":"MONDO:0002417","xrefs":{"Monarch":{"xref_id":"0002417"}}}


id: PBO:0001793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin family C2 domain protein, Syn1","termid":"PBO:0001793"}


id: MONDO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vasoproliferative tumor of the retina is a rare, benign, retinal vascular disease characterized by solitary or multiple, unilateral or bilateral, intra-retinal tumor(s), usually located in the peripheral infero-temporal quadrant, and often associated with sub- and intraretinal exudates, epiretinal membranes, exudative retinal detachment and cystoid macular edema, as well as, occasionally, retinal and vitreous hemorrhage. Patients may present with visual loss, floaters, and/or photopsia. Association with various conditions, such as retinitis pigmentosa, congenital retinal toxoplasmosis, retinopathy of prematurity, or coloboma, has been reported.","definition_xrefs":["Orphanet:353356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vasoproliferative tumor of retina","secondary_identifiers":["GARD:21533","MEDGEN:1652844","UMLS:C4749792"],"synonyms":[{"name":"VPTR","type":"exact"},{"name":"retinal vasoproliferative tumor","type":"exact"},{"name":"retinal vasoproliferative tumour","type":"exact"},{"name":"vasoproliferative tumor of ocular fundus","type":"exact"},{"name":"vasoproliferative tumor of the ocular fundus","type":"exact"},{"name":"vasoproliferative tumor of the retina","type":"related"},{"name":"vasoproliferative tumour of ocular fundus","type":"exact"},{"name":"vasoproliferative tumour of the ocular fundus","type":"exact"},{"name":"vasoproliferative tumour of the retina","type":"related"}],"termid":"MONDO:0018148","xrefs":{"Monarch":{"xref_id":"0018148"}}}


id: MONDO:0005045
data:
  {"annotated_genes":["SJAG_01181","SJAG_03126","SJAG_02785","SJAG_02536","SJAG_03453","SJAG_02342","SJAG_00547","SJAG_00228","SJAG_01665","SJAG_02431","SJAG_00993","SJAG_02923","SJAG_03703","SJAG_03077","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[86842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[86844,86843,86845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[86850,86849,86848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[87511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[87006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[86984,86985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008647"},{"annotations":[88263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012112"},{"annotations":[88025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012799"},{"annotations":[88272,88273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013197"},{"annotations":[87158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[88268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012111"},{"annotations":[89072,89073,89071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[87329,87330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"A condition in which the myocardium is hypertrophied without an obvious cause. The hypertrophy is generally asymmetric and may be associated with obstruction of the ventricular outflow tract.","definition_xrefs":["NCIT:C34449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00547":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01665":null,"SJAG_02342":null,"SJAG_02431":null,"SJAG_02536":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03077":null,"SJAG_03126":null,"SJAG_03145":null,"SJAG_03453":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:2881","EFO:0000538","NANDO:1200288","SCTID:233873004","DOID:11984","ICD9:425.11","NANDO:1200286","MESH:D002312","Orphanet:217569","ICD9:425.4","NANDO:2201042","icd11.foundation:1830681485","ICD9:425.1","ICD10CM:I42.2","ICD10CM:I42.1","MedDRA:10020871","NANDO:2200229","UMLS:C0007194","HP:0001639","NANDO:2100054"],"synonyms":[{"name":"HCM - hypertrophic cardiomyopathy","type":"related"},{"name":"familial hypertrophic cardiomyopathy","type":"narrow"},{"name":"hypertrophic cardiomyopathy","type":"exact"},{"name":"hypertrophic obstructive cardiomyopathy","type":"exact"},{"name":"hypertrophic subaortic stenosis","type":"exact"},{"name":"obstructive hypertrophic cardiomyopathy","type":"exact"}],"termid":"MONDO:0005045","terms_by_termid":{"MONDO:0008104":null,"MONDO:0008647":null,"MONDO:0009026":null,"MONDO:0010946":null,"MONDO:0012111":null,"MONDO:0012112":null,"MONDO:0012371":null,"MONDO:0012557":null,"MONDO:0012799":null,"MONDO:0013186":null,"MONDO:0013197":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0033669":null,"MONDO:0054588":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0005045"}}}


id: MONDO:0011367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary disorder characterized by disproportionate short stature, a relatively large head, and a long triangular face early in life. This phenotype later evolves to one with in which the head is relatively small, the mandible is large and pointy. The affected individuals have normal cognitive abilities and lack any neurological deficits. Other typical features include a prominent nose, a voice with an unusual high-pitched sound, relatively small ears, curved digits (clinodactyly), short bones in fingers and toes (brachydactyly), small hands, underdeveloped (hypoplastic) fingernails, a waddling gait, and sparse hair post-pubertally.","definition_xrefs":["PMID:22440536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acrodysplasia with ossification abnormalities, short stature, and fibular hypoplasia","secondary_identifiers":["MEDGEN:355009","OMIM:603740","MESH:C538181","UMLS:C1863556"],"synonyms":[{"name":"acrodysplasia with ossification abnormalities, short stature and fibular hypoplasia","type":"related"},{"name":"acrodysplasia with ossification abnormalities, short stature, and fibular hypoplasia","type":"exact"}],"termid":"MONDO:0011367","xrefs":{"Monarch":{"xref_id":"0011367"}}}


id: GO:0070212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of multiple ADP-ribose residues from NAD to a protein amino acid, forming a poly(ADP-ribose) chain.","definition_xrefs":["PMID:25043379","GOC:rl","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein poly-ADP-ribosylation","synonyms":[{"name":"addition of poly-ADP-ribose to protein","type":"exact"},{"name":"poly(ADP-ribose) addition to protein","type":"exact"},{"name":"protein amino acid poly-ADP-ribosylation","type":"exact"},{"name":"protein poly(ADP-ribose) metabolism","type":"related"},{"name":"protein poly(ADP-ribose) synthesis","type":"exact"}],"termid":"GO:0070212"}


id: PBO:0078153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 31 (pseudogene)","termid":"PBO:0078153"}


id: MONDO:0010371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked recessive retinal disease characterized by fundus hypopigmentation, decrased visual acuity, nystagmus, astigmatism, progressive axial myopia, defective dark adaptation and protanopia.","definition_xrefs":["Orphanet:178333"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"CACNA1F-related retinopathy","termid":"MONDO:0700243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Aland island eye disease","secondary_identifiers":["DOID:0050630","MESH:C562664","SCTID:266455006","UMLS:C0268505","GARD:10574","ICD10CM:H35.5","OMIM:300600","MEDGEN:120643"],"synonyms":[{"name":"AIED","type":"exact"},{"name":"ALAND ISLAND eye disease","type":"related"},{"name":"Aland island eye disease","type":"exact"},{"name":"FORSIUS-Eriksson type ocular albinism","type":"exact"},{"name":"Forsius Eriksson type ocular albinism","type":"related"},{"name":"Forsius-Eriksson syndrome","type":"exact"},{"name":"Forsius-Eriksson type ocular albinism","type":"exact"},{"name":"Åland Islands eye disease","type":"related"}],"termid":"MONDO:0010371","xrefs":{"Monarch":{"xref_id":"0010371"}}}


id: GO:0045617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of keratinocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epidermal cell differentiation","termid":"GO:0045605"},{"relation_name":"is_a","term_name":"regulation of keratinocyte differentiation","termid":"GO:0045616"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of keratinocyte differentiation","synonyms":[{"name":"down regulation of keratinocyte differentiation","type":"exact"},{"name":"down-regulation of keratinocyte differentiation","type":"exact"},{"name":"downregulation of keratinocyte differentiation","type":"exact"},{"name":"inhibition of keratinocyte differentiation","type":"narrow"}],"termid":"GO:0045617"}


id: PBO:0087866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of the pleiotropic drug resistance network; regulates expression of ATP-binding cassette (ABC) transporters through binding to cis-acting PDRE sites (PDR responsive elements); has a role in response to drugs and organic solvents; post-translationally up-regulated in cells lacking functional mitochondrial genome; involved in diauxic shift; relative distribution to nucleus increases upon DNA replication stress; APCC(Cdh1) substrate","termid":"PBO:0087866"}


id: PBO:0000741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family","termid":"PBO:0000741"}


id: GO:0031649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any homeostatic process in which an organism produces heat, thereby raising its internal temperature.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heat generation","termid":"GO:0031649"}


id: GO:1902123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-pinoresinol.","definition_xrefs":["PMID:15949826","GOC:TermGenie","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"(-)-pinoresinol metabolic process","termid":"GO:1901598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(-)-pinoresinol catabolic process","synonyms":[{"name":"(-)-pinoresinol breakdown","type":"exact"},{"name":"(-)-pinoresinol catabolism","type":"exact"},{"name":"(-)-pinoresinol degradation","type":"exact"}],"termid":"GO:1902123"}


id: GO:0004655
data:
  {"annotated_genes":["SJAG_01372"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73385],"is_not":false,"summary":null,"term":"GO:0004655"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 5-aminolevulinate = 2 H2O + H+ + porphobilinogen.","definition_xrefs":["EC:4.2.1.24","RHEA:24064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"porphobilinogen synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PORPHOBILSYNTH-RXN","KEGG_REACTION:R00036","Reactome:R-HSA-189439"],"synonyms":[{"name":"5-aminolevulinate hydro-lyase (adding 5-aminolevulinate and cyclizing)","type":"related"},{"name":"5-aminolevulinate hydro-lyase (adding 5-aminolevulinate and cyclizing; porphobilinogen-forming)","type":"related"},{"name":"5-levulinic acid dehydratase activity","type":"related"},{"name":"aminolevulinate dehydratase activity","type":"exact"},{"name":"aminolevulinic dehydratase activity","type":"related"},{"name":"delta-aminolevulinate dehydratase activity","type":"related"},{"name":"delta-aminolevulinic acid dehydrase activity","type":"related"},{"name":"delta-aminolevulinic acid dehydratase activity","type":"exact"},{"name":"delta-aminolevulinic dehydratase activity","type":"related"}],"termid":"GO:0004655","terms_by_termid":{"GO:0004655":null}}


id: PBO:0057000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 92b","termid":"PBO:0057000"}


id: MONDO:0005468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blood pressure that is abnormally low.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotensive disorder","secondary_identifiers":["HP:0002615","ICD9:458.9","MEDGEN:5715","ICD9:458","UMLS:C0020649","SCTID:45007003","EFO:0005251","MESH:D007022","ICD9:458.8"],"synonyms":[{"name":"hypotension","type":"exact"},{"name":"hypotension (disease)","type":"exact"}],"termid":"MONDO:0005468","xrefs":{"Monarch":{"xref_id":"0005468"}}}


id: GO:0042399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid), a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["PMID:11823218","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ectoine metabolic process","synonyms":[{"name":"ectoine metabolism","type":"exact"}],"termid":"GO:0042399"}


id: FYPO:0006357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling, i.e. any dynamic structural change to chromatin, occurs to a lower extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PMID:28674280","PomBase:mah","GO:0006338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased chromatin remodeling during glucose starvation","synonyms":[{"name":"decreased chromatin modeling during glucose starvation","type":"exact"},{"name":"decreased chromatin remodeling during glucose depletion","type":"exact"},{"name":"decreased chromatin remodeling during glucose deprivation","type":"related"},{"name":"decreased chromatin remodeling during glucose limitation","type":"related"},{"name":"decreased chromatin remodelling during glucose starvation","type":"exact"},{"name":"reduced decreased chromatin remodeling during glucose starvation","type":"exact"}],"termid":"FYPO:0006357"}


id: PBO:0075058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-21","termid":"PBO:0075058"}


id: MONDO:0017900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mendelian susceptibily to mycobacterial diseases (MSMD) due to complete interferon gamma receptor 2 (IFN-gammaR2) deficiency is a genetic variant of MSMD characterized by a complete deficiency in IFN-gammaR2, leading to an undetectable response to IFN-gamma, and consequently, to severe and often fatal infections with bacillus Calmette-GuC)rin (BCG) and other environmental mycobacteria (EM).","definition_xrefs":["Orphanet:319547"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immunodeficiency 28","termid":"MONDO:0013953"},{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive Mendelian susceptibility to mycobacterial diseases due to complete IFNgammaR2 deficiency","secondary_identifiers":["UMLS:C4303071","MEDGEN:928740"],"synonyms":[{"name":"IFNGR2 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency","type":"exact"},{"name":"MSMD due to complete IFNgammaR2 deficiency","type":"exact"},{"name":"MSMD due to complete interferon gamma receptor 2 deficiency","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial diseases due to complete interferon gamma receptor 2 deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency caused by mutation in IFNGR2","type":"exact"}],"termid":"MONDO:0017900","xrefs":{"Monarch":{"xref_id":"0017900"}}}


id: PBO:0056800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056800"}


id: PBO:0063062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase 2","termid":"PBO:0063062"}


id: PBO:0110805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription repressor Scr1, glucose sensing","termid":"PBO:0110805"}


id: FYPO:0006051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of lipid droplets to the prospore membrane occurs to a lower extent than normal.","definition_xrefs":["PMID:28011631","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane organization during vegetative growth","termid":"FYPO:0001351"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000121"],"is_obsolete":false,"name":"decreased lipid droplet localization to prospore membrane leading edge","synonyms":[{"name":"decreased lipid droplet localization to FSM leading edge","type":"exact"},{"name":"decreased lipid droplet localization to forespore membrane leading edge","type":"exact"},{"name":"decreased lipid particle localization to prospore membrane leading edge","type":"exact"},{"name":"reduced lipid droplet localization to prospore membrane leading edge","type":"exact"}],"termid":"FYPO:0006051"}


id: FYECO:0000393
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which caspofungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at sub lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ caspofungin","termid":"FYECO:0000392"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ caspofungin SLD","termid":"FYECO:0000393"}


id: MONDO:0019972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arteriovenous hemangioma/malformation","termid":"MONDO:0001256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dural sinus malformation","secondary_identifiers":["MEDGEN:824993","UMLS:C3839148","GARD:19368","icd11.foundation:454640405","Orphanet:97339"],"synonyms":[{"name":"cranial dural arteriovenous fistula","type":"exact"},{"name":"cranial dural arteriovenous malformations","type":"exact"}],"termid":"MONDO:0019972","xrefs":{"Monarch":{"xref_id":"0019972"}}}


id: PATO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000164 relative temporal (obsolete PATO:0000164)","termid":"PATO:0000164"}


id: SO:0000956
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"single","termid":"SO:0000984"},{"relation_name":"is_a","term_name":"DNA_chromosome","termid":"SO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single_stranded_DNA_chromosome","synonyms":[{"name":"single stranded DNA chromosome","type":"exact"}],"termid":"SO:0000956"}


id: PBO:0063728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHACTR2 antisense RNA 1","termid":"PBO:0063728"}


id: MONDO:0013959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 4F (CMT4F) is a severe, demyelinating subtype of Charcot-Marie-Tooth disease type 4 characterized by the childhood onset of a slowly-progressing typical CMT phenotype (i.e. distal muscle weakness and atrophy, as well as pes cavus) that presents severe sensory loss (frequently with sensory ataxia), moderately to severely reduced motor nerve conduction velocities and almost invariable absence of sensory nerve action potentials, and delayed motor milestones.","definition_xrefs":["Orphanet:99952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 4","termid":"MONDO:0018995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4F","secondary_identifiers":["SCTID:715801001","MEDGEN:761704","OMIM:614895","DOID:0110193","icd11.foundation:330503211","GARD:12441","UMLS:C3540453"],"synonyms":[{"name":"CMT4F","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4 caused by mutation in PRX","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4 caused by mutation in Prx","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 4F","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4F","type":"exact"},{"name":"PRX Charcot-Marie-Tooth disease type 4","type":"exact"},{"name":"Prx Charcot-Marie-Tooth disease type 4","type":"exact"}],"termid":"MONDO:0013959","xrefs":{"Monarch":{"xref_id":"0013959"}}}


id: GO:0050457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + lauroyl-CoA + oxaloacetate = (2S,3S)-2-hydroxytridecane-1,2,3-tricarboxylate + CoA + H+.","definition_xrefs":["RHEA:16605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"decylcitrate synthase activity","secondary_identifiers":["KEGG_REACTION:R03735","EC:2.3.3.2","MetaCyc:DECYLCITRATE-SYNTHASE-RXN"],"synonyms":[{"name":"(2S,3S)-2-hydroxytridecane-1,2,3-tricarboxylate oxaloacetate-lyase (CoA- acylating) activity","type":"related"},{"name":"(2S,3S)-2-hydroxytridecane-1,2,3-tricarboxylate oxaloacetate-lyase (CoA-acylating)","type":"related"},{"name":"2-decylcitrate synthase activity","type":"related"},{"name":"dodecanoyl-CoA:oxaloacetate C-dodecanoyltransferase (thioester-hydrolysing, 1-carboxyundecyl-forming)","type":"related"}],"termid":"GO:0050457"}


id: PBO:0071910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 49","termid":"PBO:0071910"}


id: PBO:0055336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2764","termid":"PBO:0055336"}


id: PBO:0030815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_aconitate_hydratase_activity","termid":"PBO:0030815"}


id: MONDO:0004821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the nasopharynx. Representative examples include nasopharyngitis, angiofibroma, and carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upper respiratory tract disorder","termid":"MONDO:0004867"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal disorder","secondary_identifiers":["DOID:9561","MESH:D009302","SCTID:123952009","MEDGEN:45007","UMLS:C0027438","NCIT:C35723"],"synonyms":[{"name":"disease of nasopharynx","type":"exact"},{"name":"disease or disorder of nasopharynx","type":"exact"},{"name":"disorder of nasopharynx","type":"exact"},{"name":"disorder of postnasal space","type":"related"},{"name":"nasopharyngeal disorder","type":"exact"},{"name":"nasopharynx disease","type":"exact"},{"name":"nasopharynx disease or disorder","type":"exact"}],"termid":"MONDO:0004821","xrefs":{"Monarch":{"xref_id":"0004821"}}}


id: PBO:0064564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraoxonase 2","termid":"PBO:0064564"}


id: MONDO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the vagina due to thinning of the vaginal wall and decreased lubrication associated with reduced estrogen levels at menopause.","definition_xrefs":["MESH:D059268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginitis","termid":"MONDO:0002234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postmenopausal atrophic vaginitis","secondary_identifiers":["ICD10CM:N95.2","MEDGEN:510282","DOID:11968","ICD9:627.3","icd11.foundation:1876048433","SCTID:52441000","UMLS:C0156409"],"synonyms":[{"name":"atrophic vaginitis","type":"exact"},{"name":"senile vaginitis","type":"exact"}],"termid":"MONDO:0001410","xrefs":{"Monarch":{"xref_id":"0001410"}}}


id: PBO:0063772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 3","termid":"PBO:0063772"}


id: GO:0014863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a inactivity stimulus is received by a cell or organism and converted into a molecular signal.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inactivity","termid":"GO:0014854"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of inactivity","termid":"GO:0014863"}


id: PBO:0042192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D2 pseudogene 1","termid":"PBO:0042192"}


id: GO:0032152
data:
  {"annotated_genes":["SJAG_04470","SJAG_01769","SJAG_03688","SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96355,101998,107934,117949],"is_not":false,"summary":null,"term":"GO:0032152"}]},"cv_name":"cellular_component","definition":"A heterooligomeric septin complex that acts during meiotic cell division.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin complex","termid":"GO:0031105"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01769":null,"SJAG_03688":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"meiotic septin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032152","terms_by_termid":{"GO:0032152":null}}


id: GO:0034304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiated, resting cells are formed from a substrate mycelium; characteristic of many members of the order Actinomycetales.","definition_xrefs":["ISBN:0122268008","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"},{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actinomycete-type spore formation","termid":"GO:0034304"}


id: MONDO:0020574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Germ cell tumors of the central nervous system other than germinoma. This category includes teratoma, choriocarcinoma, embryonal carcinoma, and yolk sac tumor.","definition_xrefs":["NCIT:C100093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"},{"relation_name":"is_a","term_name":"extragonadal non-dysgerminomatous germ cell tumor","termid":"MONDO:0020539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system nongerminomatous germ cell tumor","secondary_identifiers":["MEDGEN:760465","UMLS:C1696109"],"synonyms":[{"name":"central nervous system nongerminomatous germ cell tumor","type":"exact"},{"name":"nongerminomatous GCT - CNS","type":"exact"},{"name":"nongerminomatous germ cell tumor of the CNS","type":"exact"},{"name":"nongerminomatous germ cell tumour of the CNS","type":"exact"}],"termid":"MONDO:0020574","xrefs":{"Monarch":{"xref_id":"0020574"}}}


id: PBO:0079051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 7-1","termid":"PBO:0079051"}


id: PBO:0089292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a","termid":"PBO:0089292"}


id: GO:0006781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions that utilize succinyl-CoA in the synthesis of protoporphyrin IX.","definition_xrefs":["ISBN:0879010479","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"porphyrin-containing compound biosynthetic process","termid":"GO:0006779"},{"relation_name":"part_of","term_name":"uroporphyrinogen III biosynthetic process","termid":"GO:0006780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"part_of","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0033013","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"succinyl-CoA pathway","synonyms":[{"name":"biosynthesis of protoporphyrin IX via succinyl CoA","type":"exact"},{"name":"biosynthesis of protoporphyrin IX via succinyl-CoA","type":"exact"},{"name":"biosynthetic process of protoporphyrin IX via succinyl CoA","type":"exact"},{"name":"biosynthetic process of protoporphyrin IX via succinyl-CoA","type":"exact"},{"name":"succinyl CoA pathway","type":"exact"}],"termid":"GO:0006781"}


id: PR:O60074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- did2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein-sorting-associated protein 46 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.12","synonyms":[{"name":"Spom972h-did2","type":"exact"},{"name":"charged multivesicular body protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"doa4-independent degradation protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60074"}


id: PBO:0063479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDLIM1 interacting kinase 1 like","termid":"PBO:0063479"}


id: PBO:0058233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4522","termid":"PBO:0058233"}


id: MONDO:0022866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal dystrophy pigmentary anomaly malabsorption","termid":"MONDO:0022866","xrefs":{"Monarch":{"xref_id":"0022866"}}}


id: PBO:0059971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 16","termid":"PBO:0059971"}


id: GO:0090471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9,9',15-tri-cis-zeta-carotene = 9,9'-di-cis-zeta-carotene.","definition_xrefs":["RHEA:30967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"9,15,9'-tri-cis-zeta-carotene isomerase activity","secondary_identifiers":["EC:5.2.1.12","MetaCyc:RXN-11354"],"synonyms":[{"name":"9,15,9'-tricis-zeta-carotene cis-trans-isomerase","type":"related"}],"termid":"GO:0090471"}


id: FYPO:0000290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle that affects DNA-dependent transcription.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"transcription phenotype during vegetative growth","synonyms":[{"name":"transcription phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000290"}


id: PBO:0082159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenine phosphoribosyltransferase; catalyzes the formation of AMP from adenine and 5-phosphoribosylpyrophosphate; involved in the salvage pathway of purine nucleotide biosynthesis; APT1 has a paralog, APT2, that arose from the whole genome duplication","termid":"PBO:0082159"}


id: PBO:0042963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 1","termid":"PBO:0042963"}


id: MONDO:0013450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital stationary night blindness in which the cause of the disease is a mutation in the SLC24A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"congenital stationary night blindness 1D","secondary_identifiers":["MEDGEN:462543","OMIM:613830","UMLS:C3151193","DOID:0110868","GARD:15721"],"synonyms":[{"name":"CSNB1D","type":"exact"},{"name":"Csnb, complete, autosomal recessive","type":"related"},{"name":"SLC24A1 congenital stationary night blindness","type":"exact"},{"name":"congenital stationary night blindness 1D","type":"exact"},{"name":"congenital stationary night blindness 1D autosomal recessive","type":"exact"},{"name":"congenital stationary night blindness caused by mutation in SLC24A1","type":"exact"},{"name":"congenital stationary night blindness type 1D","type":"exact"},{"name":"night blindness, congenital stationary (complete), 1D, autosomal recessive","type":"exact"},{"name":"night blindness, congenital stationary, type 1D","type":"related"}],"termid":"MONDO:0013450","xrefs":{"Monarch":{"xref_id":"0013450"}}}


id: PBO:0073422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seizure related 6 homolog like 2","termid":"PBO:0073422"}


id: PBO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase (predicted)","termid":"PBO:0000381"}


id: PBO:0044887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 1","termid":"PBO:0044887"}


id: PBO:0069490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 757, pseudogene","termid":"PBO:0069490"}


id: MONDO:1011350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Premature aging syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature aging syndrome, non-human animal","termid":"MONDO:1011350","xrefs":{"Monarch":{"xref_id":"1011350"}}}


id: GO:0015776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of capsular polysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Capsular polysaccharides make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transport","termid":"GO:0015774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"capsular polysaccharide transport","synonyms":[{"name":"capsular-polysaccharide transport","type":"exact"},{"name":"capsule polysaccharide transport","type":"exact"}],"termid":"GO:0015776"}


id: SO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Describes the natural sequence variants due to polymorphisms, disease-associated mutations, RNA editing and variations between strains, isolates or cultivars.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_variation_site","termid":"SO:0001146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"natural_variant_site","secondary_identifiers":["BS:00071"],"synonyms":[{"name":"natural_variant","type":"broad"},{"name":"sequence variation","type":"broad"},{"name":"variant","type":"broad"}],"termid":"SO:0001147"}


id: PBO:0081753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 682","termid":"PBO:0081753"}


id: MONDO:0011518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wiedemann-Steiner syndrome is a rare genetic condition characterized by distinctive facial features, hairy elbows, short stature, and intellectual disability. This condition is caused by changes (mutations) in the KMT2A gene (also known as the MLL gene). It is inherited in an autosomal dominant manner. Most cases result from new (de novo) mutations that occur only in an egg or sperm cell, or just after conception. Treatment is symptomatic and supportive and may include special education classes and speech and occupational therapies aimed at increasing motor functioning and language.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiedemann-Steiner syndrome","secondary_identifiers":["MESH:C536704","UMLS:C1854630","OMIM:605130","GARD:5565","NORD:150898","MEDGEN:340266","Orphanet:319182"],"synonyms":[{"name":"A syndrome of abnormal facies, short stature, and psychomotor retardation","type":"related"},{"name":"WDSTS","type":"related"},{"name":"Wiedemann Grosse Dibbern syndrome","type":"related"},{"name":"Wiedemann-Steiner syndrome","type":"exact"},{"name":"hairy elbows, short stature, Facial Dysmorphism, and developmental delay","type":"related"},{"name":"hypertrichosis-short stature-facial dysmorphism-developmental delay syndrome","type":"exact"}],"termid":"MONDO:0011518","xrefs":{"Monarch":{"xref_id":"0011518"}}}


id: PBO:0077727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 17","termid":"PBO:0077727"}


id: PBO:0090952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin-interacting protein, BFC/FNIP-Folliculin complex subunit subunit Fnp1","termid":"PBO:0090952"}


id: GO:0017153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium:dicarboxylate symporter activity","synonyms":[{"name":"sodium:dicarboxylate cotransporter activity","type":"broad"}],"termid":"GO:0017153"}


id: GO:0080082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in esculin.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"esculin beta-glucosidase activity","termid":"GO:0080082"}


id: MONDO:0024496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic qualifier indicating that a neoplastic lesion is moderately to poorly differentiated.","definition_xrefs":["NCIT:C94678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general tumor grading characteristic","termid":"MONDO:0024489"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade 2 or 3, general grading system","synonyms":[{"name":"grade 2/3","type":"exact"}],"termid":"MONDO:0024496","xrefs":{"Monarch":{"xref_id":"0024496"}}}


id: PBO:0041889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catsper channel auxiliary subunit epsilon","termid":"PBO:0041889"}


id: PBO:0049651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 5","termid":"PBO:0049651"}


id: MONDO:0008525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary syringomyelia","termid":"MONDO:0020508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomyelia, isolated","secondary_identifiers":["OMIM:186700","UMLS:C4538540","MESH:C566084","MEDGEN:1622554"],"synonyms":[{"name":"syringomyelia, isolated","type":"exact"},{"name":"syringomyelia, noncommunicating isolated","type":"related"}],"termid":"MONDO:0008525","xrefs":{"Monarch":{"xref_id":"0008525"}}}


id: GO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a tumor cell is received and converted into a molecular signal.","definition_xrefs":["GOC:add","PMID:16730260","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"detection of biotic stimulus","termid":"GO:0009595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of tumor cell","termid":"GO:0002355"}


id: MONDO:1012733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome that occurs in cattle with absence of dermatan sulfate proteoglycan.","definition_xrefs":["OMIA:001716-9913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, non-human animal","termid":"MONDO:1011425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome with absence of dermatan sulfate proteoglycan, cattle","termid":"MONDO:1012733","xrefs":{"Monarch":{"xref_id":"1012733"}}}


id: GO:0003733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonucleoprotein (obsolete GO:0003733)","synonyms":[{"name":"ribonucleoprotein","type":"exact"}],"termid":"GO:0003733"}


id: PBO:0031629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_spore_germination","termid":"PBO:0031629"}


id: GO:0006618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the signal peptide from a nascent protein during cotranslational membrane targeting.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal peptide processing","termid":"GO:0006465"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006605","GO:0051604"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, signal sequence processing","synonyms":[{"name":"SRP-dependent cotranslational membrane targeting, signal sequence processing","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, signal sequence processing","type":"exact"},{"name":"signal sequence processing during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006618"}


id: PBO:0061180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 10-1","termid":"PBO:0061180"}


id: PBO:0043080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 10 subunit","termid":"PBO:0043080"}


id: GO:0043396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of corticotropin-releasing hormone (CRH), a polypeptide hormone involved in the stress response. CRH is produced by the hypothalamus and stimulates corticotropic cells of the anterior lobe of the pituitary to produce corticotropic hormone (CTH) and other biologically active substances e.g. 2-endorphin, release of CRH is affected by serum levels of cortisol, by stress and by the sleep/wake cycle.","definition_xrefs":["GOC:go_curators","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"corticotropin-releasing hormone secretion","synonyms":[{"name":"CRF secretion","type":"exact"},{"name":"CRH secretion","type":"exact"},{"name":"corticotropin-releasing factor secretion","type":"exact"}],"termid":"GO:0043396"}


id: PBO:0006333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLYK family kinase of unknown specificity (predicted)","termid":"PBO:0006333"}


id: GO:0062166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of pseudohyphal septin ring assembly.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of pseudohyphal septin ring assembly","termid":"GO:0062164"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"pseudohyphal septin ring assembly","termid":"GO:0062163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"negative regulation of pseudohyphal septin ring assembly","termid":"GO:0062166"}


id: GO:1901958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cutin biosynthetic process.","definition_xrefs":["PMID:23243127","GOC:tb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of cutin biosynthetic process","termid":"GO:1901957"},{"relation_name":"negatively_regulates","term_name":"cutin biosynthetic process","termid":"GO:0010143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cutin biosynthetic process","synonyms":[{"name":"down regulation of cutin anabolism","type":"exact"},{"name":"down regulation of cutin biosynthesis","type":"exact"},{"name":"down regulation of cutin biosynthetic process","type":"exact"},{"name":"down regulation of cutin formation","type":"exact"},{"name":"down regulation of cutin synthesis","type":"exact"},{"name":"down-regulation of cutin anabolism","type":"exact"},{"name":"down-regulation of cutin biosynthesis","type":"exact"},{"name":"down-regulation of cutin biosynthetic process","type":"exact"},{"name":"down-regulation of cutin formation","type":"exact"},{"name":"down-regulation of cutin synthesis","type":"exact"},{"name":"downregulation of cutin anabolism","type":"exact"},{"name":"downregulation of cutin biosynthesis","type":"exact"},{"name":"downregulation of cutin biosynthetic process","type":"exact"},{"name":"downregulation of cutin formation","type":"exact"},{"name":"downregulation of cutin synthesis","type":"exact"},{"name":"inhibition of cutin anabolism","type":"exact"},{"name":"inhibition of cutin biosynthesis","type":"exact"},{"name":"inhibition of cutin biosynthetic process","type":"narrow"},{"name":"inhibition of cutin formation","type":"exact"},{"name":"inhibition of cutin synthesis","type":"exact"},{"name":"negative regulation of cutin anabolism","type":"exact"},{"name":"negative regulation of cutin biosynthesis","type":"exact"},{"name":"negative regulation of cutin formation","type":"exact"},{"name":"negative regulation of cutin synthesis","type":"exact"}],"termid":"GO:1901958"}


id: GO:0072219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric cortical collecting duct over time, from its formation to the mature structure. The metanephric cortical collecting duct is the portion of the metanephric collecting duct that resides in the renal cortex.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical collecting duct development","termid":"GO:0072059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cortical collecting duct development","termid":"GO:0072219"}


id: PBO:0078323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA aspartic acid methyltransferase 1","termid":"PBO:0078323"}


id: GO:1901130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gentamycin.","definition_xrefs":["UniPathway:UPA00967","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"gentamycin metabolic process","termid":"GO:1901128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"gentamycin biosynthetic process","synonyms":[{"name":"gentamycin anabolism","type":"exact"},{"name":"gentamycin biosynthesis","type":"exact"},{"name":"gentamycin formation","type":"exact"},{"name":"gentamycin synthesis","type":"exact"}],"termid":"GO:1901130"}


id: PBO:0062310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily T member 2","termid":"PBO:0062310"}


id: MONDO:0025514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Livedoid vasculopathy is a blood vessel disorder that causes painful ulcers and scarring (atrophie blanche) on the feet and lower legs. These symptoms can persist for months to years and the ulcers often recur.Livedoid vasculopathy lesions appear as painful red or purple marks and spots that may progress to small, tender, irregular ulcers. Symptoms tend to worsen in the winter and summer months, and affect women more often then men. Livedoid vasculopathy may occur alone or in combination with another condition, such as lupus or thrombophilia.","definition_xrefs":["GARD:0012784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"livedoid vasculopathy","secondary_identifiers":["MEDGEN:575376","ICD9:709.1","UMLS:C0343081","GARD:12784","ICD10CM:L95.0","DOID:0040099","Orphanet:542643","icd11.foundation:1237292304","SCTID:238762002","MESH:D000090122","ICD9CM:709.1"],"synonyms":[{"name":"idiopathic atrophic blanche","type":"related"},{"name":"livedo reticularis with summer ulcerations","type":"related"},{"name":"livedo reticularis with winter ulcerations","type":"related"},{"name":"livedo vasculitis","type":"related"},{"name":"livedoid vasculitis","type":"exact"},{"name":"livedoid vasculopathy","type":"exact"},{"name":"segmental hyalinizing vasculopathy","type":"related"},{"name":"white atrophy","type":"related"}],"termid":"MONDO:0025514","xrefs":{"Monarch":{"xref_id":"0025514"}}}


id: PBO:0050303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 5","termid":"PBO:0050303"}


id: MONDO:0005253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"High-output heart failure is a heart condition that occurs when the cardiac output is higher than normal.","definition_xrefs":["EFO:0003145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart failure","termid":"MONDO:0005252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"high output heart failure","secondary_identifiers":["Wikipedia:High-output_cardiac_failure","SCTID:10091002","MEDGEN:526135","UMLS:C0221045"],"termid":"MONDO:0005253","xrefs":{"Monarch":{"xref_id":"0005253"}}}


id: MONDO:0005197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that affects the thymus. Representative examples include thymoma and carcinoma.","definition_xrefs":["NCIT:C3412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"},{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"},{"relation_name":"is_a","term_name":"thymus gland disorder","termid":"MONDO:0003393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymus neoplasm","secondary_identifiers":["ONCOTREE:THYMUS","UMLS:C3714644","SCTID:127231009","EFO:0002626","ICD9:239.89","Orphanet:100100","MEDGEN:811424","GARD:19767"],"synonyms":[{"name":"THYMUS","type":"related"},{"name":"Thymus neoplasm","type":"exact"},{"name":"Thymus tumor","type":"exact"},{"name":"Thymus tumour","type":"exact"},{"name":"neoplasm of Thymus","type":"exact"},{"name":"neoplasm of the Thymus","type":"exact"},{"name":"neoplasm of thymus","type":"exact"},{"name":"thymic neoplasm","type":"exact"},{"name":"thymic tumor","type":"exact"},{"name":"thymic tumour","type":"exact"},{"name":"thymus neoplasm (disease)","type":"exact"},{"name":"thymus tumor","type":"exact"},{"name":"thymus tumour","type":"exact"},{"name":"tumor of Thymus","type":"exact"},{"name":"tumor of the Thymus","type":"exact"},{"name":"tumor of thymus","type":"exact"},{"name":"tumour of Thymus","type":"exact"},{"name":"tumour of the Thymus","type":"exact"},{"name":"tumour of thymus","type":"exact"}],"termid":"MONDO:0005197","xrefs":{"Monarch":{"xref_id":"0005197"}}}


id: PBO:0055766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia NUP98 fusion partner 1","termid":"PBO:0055766"}


id: PBO:0069710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 990, pseudogene","termid":"PBO:0069710"}


id: GO:0044354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded, uncoated intracellular vesicle formed by the process of macropinocytosis.","definition_xrefs":["PMID:14732047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinosome","termid":"GO:0044352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0031410","GO:0005768","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"macropinosome","termid":"GO:0044354"}


id: PBO:0042262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 5 pseudogene 1","termid":"PBO:0042262"}


id: PATO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting increased activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"behavioural active","termid":"PATO:0001707"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased behavioural activity","synonyms":[{"name":"hyperactive","type":"exact"}],"termid":"PATO:0000760"}


id: PBO:0015771
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scale","termid":"PBO:0015771"}


id: MONDO:0016851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome X","secondary_identifiers":["GARD:20783","Orphanet:261519","UMLS:C5191056","icd11.foundation:573923144","MEDGEN:1673747"],"synonyms":[{"name":"UPD(X)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type X","type":"exact"}],"termid":"MONDO:0016851","xrefs":{"Monarch":{"xref_id":"0016851"}}}


id: PBO:0053042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP1B pseudogene 3","termid":"PBO:0053042"}


id: MOD:01507
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["OMSSA:176","Unimod:889#N-term","Unimod:214#N-term","OMSSA:211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","termid":"MOD:01711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ117nterm","type":"exact"},{"name":"iTRAQ4plex","type":"related"},{"name":"mTRAQ heavy","type":"related"},{"name":"mTRAQ heavy on nterm","type":"exact"}],"termid":"MOD:01507"}


id: GO:0005889
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses hydrogen:potassium-exchanging ATPase activity; characterized in animal cells, where it maintains ionic gradients of K+ at the expense of ATP hydrolysis; The complex contains two obligatory subunits, the catalytic alpha subunit and a glycosylated beta subunit; two additional subunits, gamma and channel-inducing factor (CHIF), may also be present.","definition_xrefs":["PMID:11756431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation-transporting ATPase complex","termid":"GO:0090533"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"potassium:proton exchanging ATPase complex","synonyms":[{"name":"hydrogen/potassium-exchanging ATPase complex","type":"exact"},{"name":"hydrogen:potassium-exchanging ATPase complex","type":"exact"},{"name":"proton pump","type":"broad"}],"termid":"GO:0005889"}


id: PBO:0031849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spore","termid":"PBO:0031849"}


id: GO:0016187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Internalization of the contents of a synaptic vesicle into the postsynaptic membrane following endocytosis.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle internalization (obsolete GO:0016187)","synonyms":[{"name":"synaptic vesicle internalization","type":"exact"}],"termid":"GO:0016187"}


id: GO:1905925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of invadopodium assembly.","definition_xrefs":["PMID:15684033","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invadopodium assembly (obsolete GO:1905925)","synonyms":[{"name":"down regulation of invadopodium assembly","type":"exact"},{"name":"down regulation of invadopodium formation","type":"exact"},{"name":"down-regulation of invadopodium assembly","type":"exact"},{"name":"down-regulation of invadopodium formation","type":"exact"},{"name":"downregulation of invadopodium assembly","type":"exact"},{"name":"downregulation of invadopodium formation","type":"exact"},{"name":"inhibition of invadopodium assembly","type":"narrow"},{"name":"inhibition of invadopodium formation","type":"narrow"},{"name":"negative regulation of invadopodium formation","type":"exact"}],"termid":"GO:1905925"}


id: PBO:0086425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative helicase with limited sequence similarity to human Rb protein; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YLR419W is not an essential gene","termid":"PBO:0086425"}


id: GO:0046157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"siroheme metabolic process","termid":"GO:0046156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"siroheme catabolic process","synonyms":[{"name":"sirohaem catabolic process","type":"exact"},{"name":"sirohaem catabolism","type":"exact"},{"name":"siroheme breakdown","type":"exact"},{"name":"siroheme catabolism","type":"exact"},{"name":"siroheme degradation","type":"exact"}],"termid":"GO:0046157"}


id: GO:1905170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to phagocytic vesicle.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to phagocytic vesicle","termid":"GO:1905169"},{"relation_name":"negatively_regulates","term_name":"protein localization to phagocytic vesicle","termid":"GO:1905161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to phagocytic vesicle","synonyms":[{"name":"down regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"down regulation of protein localisation to phagosome","type":"exact"},{"name":"down regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"down regulation of protein recruitment to phagosome","type":"exact"},{"name":"down-regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein localisation to phagosome","type":"exact"},{"name":"down-regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein recruitment to phagosome","type":"exact"},{"name":"downregulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"downregulation of protein localisation to phagosome","type":"exact"},{"name":"downregulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"downregulation of protein recruitment to phagosome","type":"exact"},{"name":"inhibition of protein localisation in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein localisation to phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein localisation to phagosome","type":"narrow"},{"name":"inhibition of protein localization in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein localization to phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein recruitment to phagosome","type":"narrow"},{"name":"negative regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein localisation to phagosome","type":"exact"},{"name":"negative regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905170"}


id: PBO:0054089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1442","termid":"PBO:0054089"}


id: GO:0047117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acyl-[acyl-carrier protein] + NADP+ = trans-D2-enoyl-[acyl-carrier protein] + NADPH + H+.","definition_xrefs":["MetaCyc:1.3.1.39-RXN","EC:1.3.1.39"],"gene_count":0,"genotype_count":0,"name":"obsolete enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity (obsolete GO:0047117)","synonyms":[{"name":"acyl-acyl-carrier-protein:NADP+ oxidoreductase (A-specific)","type":"related"},{"name":"enoyl-ACP reductase (NADPH, A-specific) activity","type":"exact"},{"name":"enoyl-ACp reductase activity","type":"related"},{"name":"enoyl-[acyl-carrier protein] reductase (NADPH, A-specific) activity","type":"exact"},{"name":"enoyl-acyl carrier protein (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"enoyl-acyl-carrier-protein reductase (NADPH, A-specific)","type":"related"}],"termid":"GO:0047117"}


id: GO:2001053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process","synonyms":[{"name":"regulation of mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:2001053"}


id: FYPO:0006732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to transcribed regions of chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin distal to replication origin","synonyms":[{"name":"normal protein localisation to chromatin distal to replication origin","type":"exact"},{"name":"normal protein localization to chromatin distal to replication origin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin distal to replication origin during vegetative growth","type":"exact"}],"termid":"FYPO:0006732"}


id: PBO:0064391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 13","termid":"PBO:0064391"}


id: FYPO:0001255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to the level of oxygen is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level during cellular response to oxygen","synonyms":[{"name":"increased protein accumulation during cellular response to oxygen","type":"related"},{"name":"increased protein level during cellular response to oxygen during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to oxygen during vegetative growth","type":"exact"},{"name":"increased protein level during cellular response to oxygen levels","type":"exact"}],"termid":"FYPO:0001255"}


id: MONDO:0010763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"},{"relation_name":"is_a","term_name":"partial chromosome Y deletion","termid":"MONDO:0015607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, Y-linked, 1","secondary_identifiers":["GARD:18503","OMIM:400042","UMLS:C4551960","MEDGEN:1634798","DOID:0070186"],"synonyms":[{"name":"SPGFY1","type":"related"},{"name":"Sertoli cell-only syndrome, Y-linked","type":"related"},{"name":"Sertoli cell-only syndrome, type 1","type":"related"},{"name":"Sertoli cell-only syndrome, type 2","type":"related"},{"name":"hypospermatogenesis","type":"related"},{"name":"incomplete Sertoli cell-only syndrome","type":"related"},{"name":"spermatogenic failure, Y-linked, 1","type":"exact"},{"name":"spermatogenic failure, Y-linked, 1, Y-linked","type":"exact"},{"name":"spermatogenic failure, Y-linked, type 1","type":"exact"}],"termid":"MONDO:0010763","xrefs":{"Monarch":{"xref_id":"0010763"}}}


id: PBO:0062672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily Z member 3 pseudogene","termid":"PBO:0062672"}


id: PBO:0080345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 109 pseudogene","termid":"PBO:0080345"}


id: PBO:0109031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KBTBD6 divergent transcript","termid":"PBO:0109031"}


id: MONDO:0013391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peroxisomal neurodegenerative disorder characterized by spasmodic torticollis, dystonic head tremor, intention tremor, nystagmus, hyposmia, and hypergonadotrophic hypogonadism with azoospermia. Slight cerebellar signs (left-sided intention tremor, balance and gait impairment) are also noted. Magnetic resonance imaging (MRI) shows bilateral hyperintense signals in the thalamus, butterfly-like lesions in the pons, and lesions in the occipital region, whereas nerve conduction studies of the lower extremities shows a predominantly motor and slight sensory neuropathy.","definition_xrefs":["Orphanet:163684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"sterol carrier protein 2 deficiency","secondary_identifiers":["GARD:12471","MEDGEN:462340","NANDO:1200767","UMLS:C3150990","OMIM:613724"],"synonyms":[{"name":"LKDMN","type":"related"},{"name":"SCP2 deficiency","type":"exact"},{"name":"leukoencephalopathy - dystonia - motor neuropathy","type":"related"},{"name":"leukoencephalopathy with dystonia and motor neuropathy","type":"related"},{"name":"leukoencephalopathy-dystonia-motor neuropathy syndrome","type":"exact"},{"name":"sterol carrier protein 2 deficiency","type":"exact"}],"termid":"MONDO:0013391","xrefs":{"Monarch":{"xref_id":"0013391"}}}


id: GO:1902079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-valine.","definition_xrefs":["GOC:TermGenie","PMID:23085840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-valine metabolic process","termid":"GO:1902114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-valine catabolic process","synonyms":[{"name":"D-valine breakdown","type":"exact"},{"name":"D-valine catabolism","type":"exact"},{"name":"D-valine degradation","type":"exact"}],"termid":"GO:1902079"}


id: MONDO:0014102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the SPRY4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 17 with or without anosmia","secondary_identifiers":["ICD10CM:E23.0","DOID:0090079","UMLS:C3808971","GARD:15928","MEDGEN:815301","OMIM:615266"],"synonyms":[{"name":"HH17","type":"related"},{"name":"SPRY4 hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 17 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in SPRY4","type":"exact"}],"termid":"MONDO:0014102","xrefs":{"Monarch":{"xref_id":"0014102"}}}


id: GO:0044615
data:
  {"annotated_genes":["SJAG_05243","SJAG_01584","SJAG_02274","SJAG_03593","SJAG_03300","SJAG_04645"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61411,77834,90816,96837,116872,117531],"is_not":false,"summary":null,"term":"GO:0044615"}]},"cv_name":"cellular_component","definition":"A filamentous, cage-like assembly on the nuclear face of the nuclear pore complex (NPC). In S. cerevisiae, Mlp1p and Mlp2p are two major components of the NPC nuclear basket. In vertebrates, Tpr is a major component.","definition_xrefs":["PMID:19524430","PMID:20947011","GOC:dgf","PMID:18046406","PMID:22419078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01584":null,"SJAG_02274":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_04645":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005643","GO:0005634"],"is_obsolete":false,"name":"nuclear pore nuclear basket","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044615","terms_by_termid":{"GO:0044615":null}}


id: PBO:0087711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087711"}


id: GO:1904616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin binding.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:8621557","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin binding (obsolete GO:1904616)","synonyms":[{"name":"regulation of membrane associated actin binding","type":"narrow"}],"termid":"GO:1904616"}


id: MONDO:0013926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the WDR11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 14 with or without anosmia","secondary_identifiers":["MEDGEN:761703","ICD10CM:E23.0","OMIM:614858","UMLS:C3540450","GARD:15857","DOID:0090087"],"synonyms":[{"name":"HH14","type":"related"},{"name":"WDR11 hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 14 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in WDR11","type":"exact"}],"termid":"MONDO:0013926","xrefs":{"Monarch":{"xref_id":"0013926"}}}


id: MOD:00134
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and a glycine residue by an isopeptide bond to form N6-glycyl-L-lysine.","definition_xrefs":["ChEBI:21885","RESID:AA0125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-glycyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(aminoacetyl)amino]hexanoic acid","type":"exact"},{"name":"CROSSLNK Glycyl lysine isopeptide (Gly-Lys) (interchain with K-...)","type":"exact"},{"name":"CROSSLNK Glycyl lysine isopeptide (Lys-Gly) (interchain with G-...)","type":"exact"},{"name":"N6-(glycyl)-L-lysine","type":"exact"},{"name":"N6-glycyllysine","type":"exact"},{"name":"XLNK-N6Lys-1Gly","type":"exact"}],"termid":"MOD:00134"}


id: GO:0106232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hydrolase complex that converts 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline. This is the second step of the three-step enzymatic reaction that degrades uric acid to (S)-allantoin.","definition_xrefs":["GOC:bhm","PMID:21795808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"hydroxyisourate hydrolase complex","synonyms":[{"name":"5-hydroxyisourate hydrolase complex","type":"narrow"},{"name":"HIU hydrolase complex","type":"narrow"},{"name":"HIUH complex","type":"narrow"}],"termid":"GO:0106232"}


id: PBO:0085719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in targeting mitochondrial membrane protein precursors to mitochondrial translocation system; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO); YIL029C has a paralog, YPR071W, that arose from a single-locus duplication","termid":"PBO:0085719"}


id: PBO:0052205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 2","termid":"PBO:0052205"}


id: GO:0014865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an activity stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to activity","termid":"GO:0014823"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of activity","termid":"GO:0014865"}


id: PBO:0086414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GPI protein; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; YAR066W has a paralog, YHR214W, that arose from a segmental duplication","termid":"PBO:0086414"}


id: MONDO:0100544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous condition characterized by the gradual, clonal expansion of hematopoietic stem and progenitor cells carrying specific, disruptive, and recurrent genetic variants, in individuals without clear diagnosis of hematological malignancies. It is associated with an increased risk of developing hematologic cancers.","definition_xrefs":["NCIT:C155821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clonal hematopoiesis","termid":"MONDO:0100542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"age-related clonal hematopoiesis","secondary_identifiers":["MEDGEN:1670618","UMLS:C4722404"],"synonyms":[{"name":"ARCH","type":"exact"}],"termid":"MONDO:0100544","xrefs":{"Monarch":{"xref_id":"0100544"}}}


id: PBO:0076695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A N-terminal and central domain containing 2","termid":"PBO:0076695"}


id: MONDO:0004512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningeal melanoma with secondary diffuse meningeal spread. (WHO)","definition_xrefs":["NCIT:C6891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanomatosis","termid":"MONDO:0004141"},{"relation_name":"is_a","term_name":"primary melanoma of the central nervous system","termid":"MONDO:0016747"},{"relation_name":"is_a","term_name":"malignant tumor of meninges","termid":"MONDO:0021322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"meningeal melanomatosis","secondary_identifiers":["UMLS:C1266114","ICDO:8728/3","MEDGEN:226843","DOID:8243"],"synonyms":[{"name":"leptomeningeal melanomatosis","type":"related"},{"name":"melanomatosis of meningeal cluster","type":"exact"},{"name":"meningeal cluster melanomatosis","type":"exact"},{"name":"meningeal melanomatosis","type":"exact"},{"name":"meningeal melanomatosis (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004512","xrefs":{"Monarch":{"xref_id":"0004512"}}}


id: PBO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.2.3","termid":"PBO:0001819"}


id: GO:0097452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. The complex binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs and suppresses their translation by blocking the recruitment of the 43S ribosomal complex to m7G cap-bound eIF4G. In humans it includes RPL13A, EPRS, SYNCRIP and GAPDH; mouse complexes lack SYNCRIP.","definition_xrefs":["PMID:15479637","PMID:23071094","GOC:br"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GAIT complex","synonyms":[{"name":"IFN-gamma-activated inhibitor of translation complex","type":"exact"},{"name":"gamma interferon-activated inhibitor of translation complex","type":"exact"}],"termid":"GO:0097452"}


id: PBO:0064924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP5 tetratricopeptide repeat domain containing 1, pseudogene","termid":"PBO:0064924"}


id: PR:Q9P3V8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC977.01/SPBC1348.02/SPBPB2B2.19c.","definition_xrefs":["UniProtKB:Q9P3V8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C977.01/C1348.02/PB2B2.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.19c","synonyms":[{"name":"Spom972h-SPBPB2B2.19c","type":"exact"}],"termid":"PR:Q9P3V8"}


id: PBO:0061043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 4","termid":"PBO:0061043"}


id: PBO:0038604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase 1","termid":"PBO:0038604"}


id: PBO:0052429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kizuna centrosomal protein","termid":"PBO:0052429"}


id: PBO:0075815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor cysteine rich family member with 4 domains","termid":"PBO:0075815"}


id: PATO:0000972
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000972 relative permeability (obsolete PATO:0000972)","termid":"PATO:0000972"}


id: GO:0030110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I molecule of the HLA-C subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["PMID:11929129","GOC:mah","PMID:9368779","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"HLA-C specific inhibitory MHC class I receptor activity","termid":"GO:0030110"}


id: GO:0018718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxyphenanthrene + UDP-glucose = 2-hydroxy-1-phenanthryl-beta-D-glucopyranoside + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxy-phenanthrene glycosyltransferase activity (obsolete GO:0018718)","termid":"GO:0018718"}


id: PBO:0063013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 2","termid":"PBO:0063013"}


id: PBO:0044012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1 pseudogene 1","termid":"PBO:0044012"}


id: MONDO:0008342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubic bone dysplasia","secondary_identifiers":["UMLS:C1867436","MESH:C566735","MEDGEN:356777","OMIM:178350"],"synonyms":[{"name":"pubic bone dysplasia","type":"exact"}],"termid":"MONDO:0008342","xrefs":{"Monarch":{"xref_id":"0008342"}}}


id: GO:0042496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a diacylated bacterial lipopeptide stimulus is received by a cell and converted into a molecular signal. Diacylated bacterial lipoproteins are lipopeptides of bacterial origin containing a nonprotein moiety consisting of two acyl groups.","definition_xrefs":["PMID:2757794","PMID:12077222","PMID:12524386","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of bacterial lipopeptide","termid":"GO:0070340"},{"relation_name":"is_a","term_name":"response to diacyl bacterial lipopeptide","termid":"GO:0071724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of diacyl bacterial lipopeptide","synonyms":[{"name":"detection of diacylated bacterial lipoprotein","type":"exact"},{"name":"perception of diacylated bacterial lipopeptide","type":"related"},{"name":"perception of diacylated bacterial lipoprotein","type":"related"}],"termid":"GO:0042496"}


id: PBO:0026756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hexavalent_chromium","termid":"PBO:0026756"}


id: PR:Q9P7W0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An optic atrophy 3 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12499:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPA3-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.11","secondary_identifiers":["UniProtKB:Q9P7W0"],"synonyms":[{"name":"Spom972h-OPA3","type":"exact"}],"termid":"PR:Q9P7W0"}


id: PBO:0074972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-14","termid":"PBO:0074972"}


id: GO:0030541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which plasmids are segregated or distributed into daughter cells upon cell division.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid maintenance","termid":"GO:0006276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmid partitioning","secondary_identifiers":["GO:0030542"],"termid":"GO:0030541"}


id: GO:0009071
data:
  {"annotated_genes":["SJAG_03641","SJAG_02901","SJAG_03861","SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79826,75932,98275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[115911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"serine family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid breakdown","type":"exact"},{"name":"serine family amino acid catabolism","type":"exact"},{"name":"serine family amino acid degradation","type":"exact"}],"termid":"GO:0009071","terms_by_termid":{"GO:0019450":null,"GO:0019464":null}}


id: PBO:0046989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 87 member A","termid":"PBO:0046989"}


id: MONDO:0957452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"segmental arterial mediolysis","secondary_identifiers":["icd11.foundation:1160127418","MEDGEN:1387331","Orphanet:645350","UMLS:C4517096"],"termid":"MONDO:0957452","xrefs":{"Monarch":{"xref_id":"0957452"}}}


id: MONDO:0020147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anophthalmia-microphthalmia syndrome (obsolete MONDO:0020147)","secondary_identifiers":["Orphanet:98555"],"termid":"MONDO:0020147","xrefs":{"Monarch":{"xref_id":"0020147"}}}


id: PR:P28040
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase alpha catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01433","PANTHER:PTHR10322:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.06c","secondary_identifiers":["UniProtKB:P28040"],"synonyms":[{"name":"DNA polymerase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLA1","type":"exact"}],"termid":"PR:P28040"}


id: GO:0043047
data:
  {"annotated_genes":["SJAG_02194","SJAG_00939","SJAG_03855","SJAG_04245","SJAG_01677","SJAG_04863","SJAG_05214","SJAG_02362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64217,82016,82078,97932,110060,112327,113496],"is_not":false,"summary":null,"term":"GO:0043047"},{"annotations":[78823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded telomere-associated DNA.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric DNA binding","termid":"GO:0042162"},{"relation_name":"is_a","term_name":"sequence-specific single stranded DNA binding","termid":"GO:0098847"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01677":null,"SJAG_02194":null,"SJAG_02362":null,"SJAG_03855":null,"SJAG_04245":null,"SJAG_04863":null,"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"single-stranded telomeric DNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"telomeric ssDNA binding","type":"exact"}],"termid":"GO:0043047","terms_by_termid":{"GO:0043047":null,"GO:0098505":null}}


id: MONDO:0008916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy associated with myopathy and sudden death","secondary_identifiers":["UMLS:C1859328","MESH:C565881","MEDGEN:395232","OMIM:212130"],"synonyms":[{"name":"cardiomyopathy associated with myopathy and sudden death","type":"exact"}],"termid":"MONDO:0008916","xrefs":{"Monarch":{"xref_id":"0008916"}}}


id: PBO:0042015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 71 like","termid":"PBO:0042015"}


id: PBO:0091627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA","termid":"PBO:0091627"}


id: GO:0019862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of an IgA isotype.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"IgA binding","termid":"GO:0019862"}


id: PBO:0080762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis pseudogene 1","termid":"PBO:0080762"}


id: GO:0033627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits.","definition_xrefs":["PMID:14754902","GOC:add","PMID:12213832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion mediated by integrin","synonyms":[{"name":"cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033627"}


id: MONDO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"retinal vein occlusion","termid":"MONDO:0006951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"occlusion of tributary of retinal vein","secondary_identifiers":["ICD9:362.36","DOID:13514"],"synonyms":[{"name":"venous tributary (branch) occlusion of retina","type":"exact"},{"name":"venous tributary branch occlusion of retina","type":"exact"},{"name":"venous tributary occlusion of retina","type":"exact"}],"termid":"MONDO:0001733","xrefs":{"Monarch":{"xref_id":"0001733"}}}


id: GO:1900951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 18-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"regulation of 18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900950"},{"relation_name":"is_a","term_name":"negative regulation of 18-methylnonadec-1-ene metabolic process","termid":"GO:1900954"},{"relation_name":"negatively_regulates","term_name":"18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 18-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"down regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"inhibition of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900951"}


id: PBO:0077789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase III beta pseudogene 1","termid":"PBO:0077789"}


id: GO:0100039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates pyrimidine nucleotide biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pyrimidine nucleotide biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100039)","termid":"GO:0100039"}


id: PBO:0056535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coiled-coil domain 1","termid":"PBO:0056535"}


id: PBO:0003841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II","termid":"PBO:0003841"}


id: GO:0005234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when glutamate is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"extracellularly glutamate-gated ion channel activity","synonyms":[{"name":"extracellular-glutamate-gated ion channel activity","type":"exact"}],"termid":"GO:0005234"}


id: GO:0097439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which tolerance to severe drying is acquired, before entering into a dry, either dormant or quiescent state.","definition_xrefs":["GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of desiccation tolerance","termid":"GO:0097439"}


id: GO:0072222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric early distal convoluted tubule over time, from its formation to the mature structure. The metanephric early distal convoluted tubule contains metanephric DCT cells and is vasopressin-insensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early distal convoluted tubule development","termid":"GO:0072067"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric early distal convoluted tubule development","termid":"GO:0072222"}


id: GO:0035246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group onto a nitrogen atom of an arginine residue in a protein.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine methylation","termid":"GO:0018216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine N-methylation","termid":"GO:0035246"}


id: PBO:0065203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 38A","termid":"PBO:0065203"}


id: PBO:0080610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 45B pseudogene 1","termid":"PBO:0080610"}


id: MONDO:0975958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 97","secondary_identifiers":["OMIM:621057"],"termid":"MONDO:0975958","xrefs":{"Monarch":{"xref_id":"0975958"}}}


id: PBO:0041720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calumenin","termid":"PBO:0041720"}


id: GO:1904677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of somatic stem cell division.","definition_xrefs":["GOC:TermGenie","GOC:rph","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","PMID:19409607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell division","termid":"GO:1904675"},{"relation_name":"positively_regulates","term_name":"somatic stem cell division","termid":"GO:0048103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic stem cell division","synonyms":[{"name":"activation of somatic stem cell division","type":"narrow"},{"name":"activation of somatic stem cell renewal","type":"narrow"},{"name":"positive regulation of somatic stem cell renewal","type":"exact"},{"name":"up regulation of somatic stem cell division","type":"exact"},{"name":"up regulation of somatic stem cell renewal","type":"exact"},{"name":"up-regulation of somatic stem cell division","type":"exact"},{"name":"up-regulation of somatic stem cell renewal","type":"exact"},{"name":"upregulation of somatic stem cell division","type":"exact"},{"name":"upregulation of somatic stem cell renewal","type":"exact"}],"termid":"GO:1904677"}


id: MONDO:0020195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete excretory apparatus of the lacrimal system anomaly (obsolete MONDO:0020195)","secondary_identifiers":["Orphanet:98605"],"termid":"MONDO:0020195","xrefs":{"Monarch":{"xref_id":"0020195"}}}


id: GO:0035806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change that affects blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.","definition_xrefs":["GOC:fj","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of blood coagulation in another organism (obsolete GO:0035806)","synonyms":[{"name":"modulation by organism of blood clotting in other organism","type":"exact"},{"name":"modulation by organism of blood coagulation in other organism","type":"exact"},{"name":"modulation of blood coagulation in another organism","type":"exact"},{"name":"modulation of blood coagulation in other organism","type":"exact"},{"name":"perturbation of blood clotting in another organism","type":"exact"},{"name":"regulation by organism of blood clotting in other organism","type":"exact"},{"name":"regulation of blood clotting in other organism","type":"exact"},{"name":"regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0035806"}


id: GO:0048732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gland development","termid":"GO:0048732"}


id: GO:0032472
data:
  {"annotated_genes":["SJAG_03850","SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[110611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ions (Ca2+) into, out of or within the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03850":null,"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"Golgi calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi calcium transport","type":"exact"}],"termid":"GO:0032472","terms_by_termid":{"GO:0061454":null,"GO:0061856":null}}


id: GO:0045301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylsulfanyl-N(6)-dimethylallyladenosine(37) in tRNA + acceptor-H2 + O2 = N(6)-[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]-2-(methylsulfanyl)adenosine(37) in tRNA + acceptor + H2O.","definition_xrefs":["PMID:8253666","RHEA:65812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0016491","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity","secondary_identifiers":["EC:1.14.99.69"],"synonyms":[{"name":"2-methylthio-cis-ribozeatin hydroxylase activity","type":"exact"},{"name":"tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity","type":"exact"},{"name":"tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyladenosine)-hydroxylase activity","type":"exact"},{"name":"tRNA-(ms2io6A)-hydroxylase activity","type":"exact"}],"termid":"GO:0045301"}


id: MONDO:0015113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare vascular liver disease (obsolete MONDO:0015113)","secondary_identifiers":["Orphanet:101938"],"termid":"MONDO:0015113","xrefs":{"Monarch":{"xref_id":"0015113"}}}


id: FYPO:0003665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA pyrophosphohydrolase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA pyrophosphohydrolase activity","termid":"FYPO:0003665"}


id: PBO:0111931
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3/PP2B/calcineurin subfamily","termid":"PBO:0111931"}


id: GO:0141041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of the extracellular matrix of another organism.","definition_xrefs":["PMID:2817904"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption of extracellular matrix of another organism (obsolete GO:0141041)","termid":"GO:0141041"}


id: PBO:0005130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf8","termid":"PBO:0005130"}


id: FYPO:0005850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions does not occur.","definition_xrefs":["PomBase:mah","PMID:27648579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to pericentric heterochromatin during vegetative growth","termid":"FYPO:0003074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"abolished protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"abolished protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"abolished protein localization at centromere otr","type":"exact"},{"name":"abolished protein localization at centromeric outer repeat region","type":"exact"},{"name":"abolished protein localization at pericentric region","type":"related"},{"name":"abolished protein localization at pericentromeric region","type":"related"},{"name":"abolished protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"abolished protein localization to chromatin at centromere otr","type":"exact"},{"name":"abolished protein localization to chromatin at centromere outer repeat","type":"exact"},{"name":"abolished protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at centromeric outer repeat","type":"exact"},{"name":"abolished protein localization to chromatin at pericentric region","type":"related"},{"name":"abolished protein localization to chromatin at pericentromeric region","type":"related"},{"name":"abolished protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"protein localization to heterochromatin at centromere outer repeat abolished","type":"exact"}],"termid":"FYPO:0005850"}


id: MONDO:0700337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any renal tubular dysgenesis in which the cause of the disease is a mutation in the ACE gene.","definition_xrefs":["PMID:22095942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular dysgenesis of genetic origin","termid":"MONDO:0009970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal tubular dysgenesis - ACE","synonyms":[{"name":"ACE related renal tubular dysgenesis","type":"exact"}],"termid":"MONDO:0700337","xrefs":{"Monarch":{"xref_id":"0700337"}}}


id: PBO:0046686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit alpha","termid":"PBO:0046686"}


id: GO:0043865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of methionine from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"methionine transmembrane transporter activity","secondary_identifiers":["GO:1990240"],"synonyms":[{"name":"methionine importer","type":"related"},{"name":"methionine importer activity","type":"narrow"},{"name":"methionine importing activity","type":"narrow"},{"name":"methionine-importing activity","type":"narrow"}],"termid":"GO:0043865"}


id: MONDO:0022070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild mental deficiency, short stature, macrocranium, cardiac anomalies, cutis laxa, peculiar facies, wrinkled palms and soles, small vertebral bodies","definition_xrefs":["GARD:0001083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cantu Sanchez-Corona Hernandez syndrome","termid":"MONDO:0022070","xrefs":{"Monarch":{"xref_id":"0022070"}}}


id: PBO:0059055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNX1 antisense RNA 2","termid":"PBO:0059055"}


id: FYPO:0004040
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[121349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[121343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003738"},{"annotations":[121211],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype that affects or involves the normal or abnormal occurrence of mitotic cell cycle arrest. In mitotic cell cycle arrest, progression through the mitotic cell cycle is halted during one of the normal phases (G1, S, G2, or M).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest phenotype","termid":"FYPO:0001024"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04332":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"mitotic cell cycle arrest phenotype","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04284","SJAG_04464","SJAG_04332"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta"],"synonyms":[{"name":"cell cycle arrest phenotype during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest phenotype during vegetative growth","type":"exact"},{"name":"fission yeast mitotic cell cycle arrest phenotype","type":"exact"}],"termid":"FYPO:0004040","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO:0003738":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with lipoarabinomannan and transmitting the signal to initiate an innate immune response.","definition_xrefs":["PMID:10586073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"lipoarabinomannan immune receptor activity","synonyms":[{"name":"LAM receptor activity","type":"exact"},{"name":"lipoarabinomannan receptor activity","type":"broad"}],"termid":"GO:0001877"}


