# terms

id: GO:0007139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows anaphase II of meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telophase","termid":"GO:0051326"},{"relation_name":"is_a","term_name":"meiosis II cell cycle phase","termid":"GO:0098765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic telophase II","termid":"GO:0007139"}


id: PBO:0053502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 485","termid":"PBO:0053502"}


id: PBO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase inhibitor associated with endocytosis (predicted)","termid":"PBO:0001317"}


id: GO:0015443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out).","definition_xrefs":["EC:3.6.3.15"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium-transporting two-sector ATPase activity (obsolete GO:0015443)","synonyms":[{"name":"sodium-transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:0015443"}


id: PBO:0038347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-creates_habitat_for","termid":"PBO:0038347"}


id: PBO:0017055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine-rich Schizosaccharomyces specific protein, predicted GPI anchor","termid":"PBO:0017055"}


id: GO:0072535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of tumor necrosis factor superfamily member 11 (TNFSF11; RANKL) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tumor necrosis factor (ligand) superfamily member 11 production","synonyms":[{"name":"RANKL production","type":"exact"},{"name":"TNFSF11 production","type":"exact"},{"name":"tumor necrosis factor ligand superfamily member 11 production","type":"exact"}],"termid":"GO:0072535"}


id: MONDO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal microaneurysm","secondary_identifiers":["DOID:11295","UMLS:C0154834","ICD9:362.14","MEDGEN:472899","SCTID:34037000"],"termid":"MONDO:0001257","xrefs":{"Monarch":{"xref_id":"0001257"}}}


id: GO:0007219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to the receptor Notch on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:go_curators","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling pathway","secondary_identifiers":["Reactome:R-HSA-157118","Wikipedia:Notch_signaling_pathway","GO:0030179"],"synonyms":[{"name":"N signaling pathway","type":"exact"},{"name":"N signalling pathway","type":"exact"},{"name":"Notch receptor signaling pathway","type":"exact"},{"name":"Notch receptor signalling pathway","type":"exact"},{"name":"Notch signalling pathway","type":"exact"},{"name":"Notch-receptor signaling pathway","type":"exact"},{"name":"Notch-receptor signalling pathway","type":"exact"}],"termid":"GO:0007219"}


id: PBO:0003233
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klp5 and klp6 enter the nucleus separately","termid":"PBO:0003233"}


id: MONDO:0021631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A astrocytoma (excluding glioblastoma) that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytoma (excluding glioblastoma)","termid":"MONDO:0019781"},{"relation_name":"is_a","term_name":"primary brain neoplasm","termid":"MONDO:0021632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain astrocytoma","secondary_identifiers":["SCTID:254938000","MEDGEN:811330","NCIT:C60780","UMLS:C3695127"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of brain","type":"exact"},{"name":"brain astrocytoma","type":"exact"},{"name":"brain astrocytoma (excluding glioblastoma)","type":"exact"}],"termid":"MONDO:0021631","xrefs":{"Monarch":{"xref_id":"0021631"}}}


id: PBO:0085066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential sumoylated protein of unknown function; similar to components of human SWI/SNF complex including SMRD3; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm, nucleus and nucleolus; TRI1 has a paralog, UAF30, that arose from the whole genome duplication","termid":"PBO:0085066"}


id: MOD:01778
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a C-terminal glycine residue to N-(glycyl)-L-cysteine by forming a peptide bond with a free L-cysteine.","definition_xrefs":["PubMed:18842002","PubMed:18799456","RESID:AA0529","PubMed:18771296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(glycyl)-L-cysteine","synonyms":[{"name":"(2R)-2-[(aminoacetyl)amino]-3-sulfanylpropanoic acid","type":"exact"},{"name":"MOD_RES CysO-cysteine adduct","type":"exact"},{"name":"N-(2-amino-1-oxoethyl)cysteine","type":"exact"},{"name":"N-(glycyl)-L-cysteine","type":"exact"}],"termid":"MOD:01778"}


id: PBO:0048509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 10","termid":"PBO:0048509"}


id: PBO:0081313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 93","termid":"PBO:0081313"}


id: GO:0003789
data:
  {"annotated_genes":["SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94386],"is_not":false,"summary":null,"term":"GO:0003789"}]},"cv_name":"molecular_function","definition":"Binding to an actin subunit and promoting its dissociation from an actin filament by a local change in actin subunit conformation and orientation, and severing of filaments.","definition_xrefs":["PMID:23727096","PMID:23395798","PMID:11812157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex destabilizing activity","termid":"GO:0140776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"actin filament severing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin depolymerizing activity","type":"exact"}],"termid":"GO:0003789","terms_by_termid":{"GO:0003789":null}}


id: PBO:0086037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function found in the ER and vacuole lumen; overexpression of YIL089W affects endocytic protein trafficking","termid":"PBO:0086037"}


id: PR:Q10250
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A disco-interacting protein 2 homolog B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C56F8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.02","secondary_identifiers":["UniProtKB:Q10250"],"synonyms":[{"name":"Spom972h-DIP2B","type":"exact"}],"termid":"PR:Q10250"}


id: GO:0019383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-camphor, a bicyclic monoterpene ketone.","definition_xrefs":["MetaCyc:P601-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid catabolic process","termid":"GO:0016100"},{"relation_name":"is_a","term_name":"(+)-camphor metabolic process","termid":"GO:0018882"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"(+)-camphor catabolic process","secondary_identifiers":["UM-BBD_pathwayID:cam"],"synonyms":[{"name":"(+)-camphor breakdown","type":"exact"},{"name":"(+)-camphor catabolism","type":"exact"},{"name":"(+)-camphor degradation","type":"exact"}],"termid":"GO:0019383"}


id: GO:1903184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-dopa.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GOC:bf","PMID:8822146","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-dopa metabolic process","synonyms":[{"name":"L-dopa metabolism","type":"exact"}],"termid":"GO:1903184"}


id: PBO:0084594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL012C-A was originally annotated as an independent ORF but due to a sequence change was merged with an adjacent ORF into a single reading frame, designated YJL012C/VTC4","termid":"PBO:0084594"}


id: GO:0046687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chromate stimulus.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chromate","synonyms":[{"name":"chromate sensitivity/resistance","type":"related"}],"termid":"GO:0046687"}


id: GO:0106089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion involved in sprouting angiogenesis.","definition_xrefs":["GOC:rph","PMID:24177325","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in sprouting angiogenesis","termid":"GO:0106088"},{"relation_name":"is_a","term_name":"negative regulation of sprouting angiogenesis","termid":"GO:1903671"},{"relation_name":"negatively_regulates","term_name":"cell adhesion involved in sprouting angiogenesis","termid":"GO:0120078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in sprouting angiogenesis","termid":"GO:0106089"}


id: FYPO:0006015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has more than one septum, and forms a mating projection.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"multiseptate cell with shmoo","synonyms":[{"name":"large non-mated cells","type":"related"},{"name":"multiseptate shmooing cell","type":"exact"}],"termid":"FYPO:0006015"}


id: PBO:0065471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 10 pseudogene 2","termid":"PBO:0065471"}


id: PBO:0043262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 20","termid":"PBO:0043262"}


id: PBO:0062786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 1","termid":"PBO:0062786"}


id: PBO:0001602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, UPF0047 family","termid":"PBO:0001602"}


id: GO:1902471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring localization.","definition_xrefs":["PMID:19959363","GOC:TermGenie","PMID:21246752","PMID:22786806"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring localization (obsolete GO:1902471)","termid":"GO:1902471"}


id: PBO:0082097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"73 kDa subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; relocates to the cytosol under hypoxic conditions; deletion mutants are temperature-sensitive; SNF12 has a paralog, RSC6, that arose from the whole genome duplication","termid":"PBO:0082097"}


id: GO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte homeostasis","synonyms":[{"name":"immune cell homeostasis","type":"exact"},{"name":"leucocyte homeostasis","type":"exact"}],"termid":"GO:0001776"}


id: PBO:0040068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPP21 antisense RNA 1","termid":"PBO:0040068"}


id: MONDO:0015956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare hereditary ataxia.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary ataxia (obsolete MONDO:0015956)","termid":"MONDO:0015956","xrefs":{"Monarch":{"xref_id":"0015956"}}}


id: RO:0002636
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite-of in which the parasite is partially an endoparasite and partially an ectoparasite","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoparasite_of","termid":"RO:0002636"}


id: GO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an alcohol from one side of a membrane to the other. An alcohol is any carbon compound that contains a hydroxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}


id: PBO:0080394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26 retromer complex component B","termid":"PBO:0080394"}


id: PBO:0055047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2462","termid":"PBO:0055047"}


id: PBO:0070395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RORA antisense RNA 2","termid":"PBO:0070395"}


id: PBO:0016549
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by frog X-MAPK","termid":"PBO:0016549"}


id: MONDO:0100400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(3;12)(q23;p12.3). (A cytogenetic abnormality that refers to the translocation of the long arm (q23) of chromosome 3 and the short arm (p12.3) of chromosome 12. It is associated with ETV6/MECOM (EVI1) fusions, myeloproliferative disorders, myelodysplastic syndromes and acute myelogenous leukemia.)","definition_xrefs":["NCIT:C168766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(3;12)(q23;p12.3)","synonyms":[{"name":"AML, t(3;12)(q23;p12.3)","type":"exact"}],"termid":"MONDO:0100400","xrefs":{"Monarch":{"xref_id":"0100400"}}}


id: PBO:0048844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-6-phosphate deaminase 2","termid":"PBO:0048844"}


id: GO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of T cell receptor genes. N regions are found at the V-D, D-D, V-J, and D-J recombinational junctions, depending on the T cell receptor gene.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of T cell receptor genes","termid":"GO:0002568"},{"relation_name":"is_a","term_name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"},{"relation_name":"part_of","term_name":"somatic recombination of T cell receptor gene segments","termid":"GO:0002681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"somatic diversification of T cell receptor genes by N region addition","synonyms":[{"name":"somatic diversification of TCR genes by N region addition","type":"exact"}],"termid":"GO:0002571"}


id: PBO:0040041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor nuclear translocator","termid":"PBO:0040041"}


id: PR:O36027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A neural Wiskott-Aldrich syndrome protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiskott-Aldrich syndrome protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.15c","secondary_identifiers":["UniProtKB:O36027"],"synonyms":[{"name":"SPAC4F10.15c","type":"related"},{"name":"Spom972h-WASL","type":"exact"}],"termid":"PR:O36027"}


id: PBO:0048918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member N","termid":"PBO:0048918"}


id: PBO:0080391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS25 pseudogene 1","termid":"PBO:0080391"}


id: PBO:0084545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the protein disulfide isomerase (PDI) family; interacts with and inhibits the chaperone activity of Cne1p; MPD1 overexpression in a pdi1 null mutant suppresses defects in Pdi1p functions such as carboxypeptidase Y maturation","termid":"PBO:0084545"}


id: GO:1900582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving o-orsellinic acid.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"o-orsellinic acid metabolic process","synonyms":[{"name":"o-orsellinic acid metabolism","type":"exact"}],"termid":"GO:1900582"}


id: GO:0034695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin E stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin","termid":"GO:0034694"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin E","synonyms":[{"name":"response to prostaglandin E stimulus","type":"exact"}],"termid":"GO:0034695"}


id: PBO:0073536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and PX domains 2A","termid":"PBO:0073536"}


id: PBO:0076967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 2 like X-linked","termid":"PBO:0076967"}


id: PBO:0056618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MECOM antisense RNA 1","termid":"PBO:0056618"}


id: GO:0071731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitric oxide stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitric oxide","termid":"GO:0071731"}


id: PBO:0091918
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FrataXiN","termid":"PBO:0091918"}


id: GO:0106419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-N6-lipoyl-L-lysyl-[protein] + H2O + NAD+ = 2''-O-lipoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["PMID:25525879","RHEA:63640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"NAD-dependent protein lipoamidase activity","secondary_identifiers":["MetaCyc:RXN-22964","EC:2.3.1.313"],"termid":"GO:0106419"}


id: PBO:0078862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 10","termid":"PBO:0078862"}


id: GO:0060933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a His-Purkinje cell over time, from its formation to the mature state. These cells form the fibers that regulate cardiac muscle contraction in the ventricles.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"His-Purkinje system cell development","termid":"GO:0060933"}


id: PBO:0073648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salt inducible kinase 2","termid":"PBO:0073648"}


id: GO:0038059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex containing two IkappaB kinase (IKK) alpha subunits.","definition_xrefs":["PMID:18626576","PMID:21173796","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IKKalpha-IKKalpha complex","synonyms":[{"name":"IKKalpha homodimer","type":"exact"},{"name":"IKKalpha homodimeric complex","type":"exact"},{"name":"IKKalpha-IKKalpha protein complex","type":"exact"},{"name":"IkappaB kinase alpha homodimer","type":"exact"},{"name":"IkappaB kinase-alpha homodimer","type":"exact"}],"termid":"GO:0038059"}


id: GO:0051196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a coenzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of coenzyme metabolic process (obsolete GO:0051196)","synonyms":[{"name":"regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"regulation of coenzyme metabolism","type":"exact"}],"termid":"GO:0051196"}


id: FYPO:0002319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lanosterol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular sterol level","termid":"FYPO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular lanosterol level","synonyms":[{"name":"increased cellular lanosterol level during mitotic cell cycle","type":"related"},{"name":"increased cellular lanosterol level during vegetative growth","type":"exact"},{"name":"increased lanosterol accumulation","type":"related"}],"termid":"FYPO:0002319"}


id: PBO:0061577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrimin","termid":"PBO:0061577"}


id: PBO:0085120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; constituent of pre-60S ribosomal particles; required for proper processing of the 27S pre-rRNA at the A3 and B1 sites to yield mature 5.8S and 25S rRNAs","termid":"PBO:0085120"}


id: PBO:0067202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 267, pseudogene","termid":"PBO:0067202"}


id: GO:0006024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any one of a group of linear polysaccharides composed of repeating disaccharide units.","definition_xrefs":["PMID:38500384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan biosynthetic process","termid":"GO:0006023"},{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosaminoglycan biosynthetic process","synonyms":[{"name":"glycosaminoglycan anabolism","type":"exact"},{"name":"glycosaminoglycan biosynthesis","type":"exact"},{"name":"glycosaminoglycan formation","type":"exact"},{"name":"glycosaminoglycan synthesis","type":"exact"}],"termid":"GO:0006024"}


id: GO:0098990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by glutamate binding to an AMPA-selective glutamate receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dos","ISBN:9780071120005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor signaling pathway","termid":"GO:0035235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"AMPA selective glutamate receptor signaling pathway","termid":"GO:0098990"}


id: MONDO:0010882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aphalangy-syndactyly-microcephaly is an extremely rare malformation syndrome characterized by the association of partial distal aphalangia with syndactyly, duplication of metatarsal IV, microcephaly, and mild intellectual disability.","definition_xrefs":["Orphanet:1113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"aphalangy-syndactyly-microcephaly syndrome","secondary_identifiers":["UMLS:C1838161","MESH:C563942","OMIM:600384","MEDGEN:324958","GARD:748"],"synonyms":[{"name":"APHALANGIA, partial, with syndactyly and DUPLICATION of metatarsal IV","type":"related"},{"name":"Aphalangia partial with syndactyly and duplication of metatarsal IV","type":"related"},{"name":"Aphalangia, partial, with syndactyly and Duplication of metatarsal 4","type":"related"},{"name":"Aphalangia, partial, with syndactyly and Duplication of metatarsal type 4","type":"exact"}],"termid":"MONDO:0010882","xrefs":{"Monarch":{"xref_id":"0010882"}}}


id: GO:0042820
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102760],"is_not":false,"summary":null,"term":"GO:0042820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["GOC:jl","PMID:30037155","PMID:30671974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"vitamin B6 catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vitamin B6 breakdown","type":"exact"},{"name":"vitamin B6 catabolism","type":"exact"},{"name":"vitamin B6 degradation","type":"exact"}],"termid":"GO:0042820","terms_by_termid":{"GO:0042820":null}}


id: PBO:0039721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOBEC3B antisense RNA 1","termid":"PBO:0039721"}


id: GO:1905022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of threonine-tRNA ligase activity.","definition_xrefs":["PMID:8049265","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of threonine-tRNA ligase activity (obsolete GO:1905022)","synonyms":[{"name":"down regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"down regulation of TRS","type":"related"},{"name":"down regulation of threonine translase activity","type":"exact"},{"name":"down regulation of threonine-tRNA ligase activity","type":"exact"},{"name":"down regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"down regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"down regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"down regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"down-regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"down-regulation of TRS","type":"related"},{"name":"down-regulation of threonine translase activity","type":"exact"},{"name":"down-regulation of threonine-tRNA ligase activity","type":"exact"},{"name":"down-regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"down-regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"down-regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"downregulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"downregulation of TRS","type":"related"},{"name":"downregulation of threonine translase activity","type":"exact"},{"name":"downregulation of threonine-tRNA ligase activity","type":"exact"},{"name":"downregulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"downregulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"downregulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"downregulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"inhibition of L-threonine:tRNAThr ligase (AMP-forming)","type":"narrow"},{"name":"inhibition of TRS","type":"related"},{"name":"inhibition of threonine translase activity","type":"narrow"},{"name":"inhibition of threonine-tRNA ligase activity","type":"narrow"},{"name":"inhibition of threonine-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"inhibition of threonyl ribonucleic synthetase activity","type":"narrow"},{"name":"inhibition of threonyl-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of threonyl-transfer RNA synthetase activity","type":"narrow"},{"name":"inhibition of threonyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"inhibition of threonyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"negative regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"negative regulation of TRS","type":"related"},{"name":"negative regulation of threonine translase activity","type":"exact"},{"name":"negative regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"negative regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"negative regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"negative regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"negative regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905022"}


id: PBO:0087659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HOPS endocytic tethering complex; vacuole membrane protein that functions as a Rab GTPase effector, interacting specifically with the GTP-bound conformation of Ypt7p, facilitating tethering, docking and promoting membrane fusion events at the late endosome and vacuole; required for both membrane and protein trafficking; Yck3p-mediated phosphorylation regulates the organization of vacuolar fusion sites","termid":"PBO:0087659"}


id: PBO:0040714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6B transcription repressor","termid":"PBO:0040714"}


id: GO:0009068
data:
  {"annotated_genes":["SJAG_02450","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[73876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aspartate family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aspartate family amino acid breakdown","type":"exact"},{"name":"aspartate family amino acid catabolism","type":"exact"},{"name":"aspartate family amino acid degradation","type":"exact"}],"termid":"GO:0009068","terms_by_termid":{"GO:0006533":null,"GO:0006567":null}}


id: GO:1901041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptide antigen transport.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002585"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of peptide antigen transport","termid":"GO:1901039"},{"relation_name":"positively_regulates","term_name":"peptide antigen transport","termid":"GO:0046968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptide antigen transport","synonyms":[{"name":"activation of peptide antigen transport","type":"narrow"},{"name":"up regulation of peptide antigen transport","type":"exact"},{"name":"up-regulation of peptide antigen transport","type":"exact"},{"name":"upregulation of peptide antigen transport","type":"exact"}],"termid":"GO:1901041"}


id: MONDO:0011788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This newly described syndrome is characterized by cloverleaf skull, limb anomalies, facial dysmorphism and multiple congenital anomalies.","definition_xrefs":["Orphanet:93267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"cloverleaf skull-multiple congenital anomalies syndrome","secondary_identifiers":["OMIM:607161","GARD:16811","SCTID:717771007","UMLS:C1846671","MEDGEN:375942","MESH:C564611"],"synonyms":[{"name":"multiple congenital anomalies syndrome with cloverleaf skull","type":"related"}],"termid":"MONDO:0011788","xrefs":{"Monarch":{"xref_id":"0011788"}}}


id: PBO:0027357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_generation_of_precursor_metabolites_and_energy_gene_mRNA_during_vegetative_growth","termid":"PBO:0027357"}


id: MONDO:0015459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the nasopharyngeal epithelium. It includes the following types: keratinizing squamous cell carcinoma, nonkeratinizing carcinoma (differentiated and undifferentiated), basaloid squamous cell carcinoma, and papillary adenocarcinoma.","definition_xrefs":["NCIT:C3871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated carcinoma","termid":"MONDO:0017344"},{"relation_name":"is_a","term_name":"malignant tumor of nasopharynx","termid":"MONDO:0021315"},{"relation_name":"is_a","term_name":"carcinoma of pharynx","termid":"MONDO:0021345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"nasopharyngeal carcinoma","secondary_identifiers":["ICD9:147.2","MESH:C538339","DOID:9261","SCTID:363398003","ICD9:147.9","Orphanet:150","ICD9:147.1","ICD9:147","UMLS:C2931822","ICD9:147.0","icd11.foundation:1883313543","MEDGEN:419909","MESH:D000077274","ONCOTREE:NPC","GARD:7163","ICD9:147.3","MedDRA:10028793","MESH:D00007727"],"synonyms":[{"name":"NPC","type":"exact"},{"name":"cancer of nasopharynx","type":"broad"},{"name":"cancer of the nasopharynx","type":"broad"},{"name":"carcinoma of nasopharynx","type":"exact"},{"name":"carcinoma of the nasopharynx","type":"exact"},{"name":"malignant nasopharyngeal tumor","type":"broad"},{"name":"malignant nasopharyngeal tumour","type":"broad"},{"name":"malignant neoplasm of anterior wall of nasopharynx","type":"broad"},{"name":"malignant neoplasm of lateral wall of nasopharynx","type":"broad"},{"name":"malignant neoplasm of nasopharyngeal wall","type":"broad"},{"name":"malignant neoplasm of nasopharynx","type":"broad"},{"name":"malignant neoplasm of nasopharynx (disorder) [ambiguous]","type":"broad"},{"name":"malignant neoplasm of other specified sites of nasopharynx","type":"broad"},{"name":"malignant neoplasm of posterior wall of nasopharynx","type":"broad"},{"name":"malignant neoplasm of roof of nasopharynx","type":"broad"},{"name":"malignant neoplasm of superior wall of nasopharynx","type":"broad"},{"name":"malignant tumor of anterior wall of nasopharynx","type":"broad"},{"name":"malignant tumor of lateral wall of nasopharynx","type":"broad"},{"name":"malignant tumor of posterior wall of nasopharynx","type":"broad"},{"name":"malignant tumour of anterior wall of nasopharynx","type":"broad"},{"name":"malignant tumour of lateral wall of nasopharynx","type":"broad"},{"name":"malignant tumour of posterior wall of nasopharynx","type":"broad"},{"name":"nasopharyngeal cancer","type":"broad"},{"name":"nasopharyngeal carcinoma","type":"exact"},{"name":"nasopharyngeal throat cancer","type":"broad"},{"name":"nasopharynx carcinoma","type":"exact"},{"name":"primary malignant neoplasm of anterior wall of nasopharynx","type":"broad"},{"name":"squamous cell carcinoma of the nasopharynx","type":"exact"}],"termid":"MONDO:0015459","xrefs":{"Monarch":{"xref_id":"0015459"}}}


id: PBO:0067191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 253, pseudogene","termid":"PBO:0067191"}


id: MONDO:0022610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiectasis oligospermia","termid":"MONDO:0022610","xrefs":{"Monarch":{"xref_id":"0022610"}}}


id: GO:0170047
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein coat that surrounds nucleic acid to form a structure similar to a virus capsid. Virus-like capsids are non-infectious and are encoded by endogenous (non-viral) genes. Fly and tetrapod Arc (ancestrally-related to retrotransposon Gag) are examples of proteins that can self-assemble into capsid-like structures which encapsulate Arc mRNA and mediate the intercellular transmission of RNA.","definition_xrefs":["PMID:29328916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus-like capsid","synonyms":[{"name":"virus-like particle","type":"narrow"}],"termid":"GO:0170047"}


id: GO:0017193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal glycine of proteins to form the derivative N-acetylglycine.","definition_xrefs":["RESID:AA0046"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-glycine acetylation (obsolete GO:0017193)","termid":"GO:0017193"}


id: FYPO:0005325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which error-free translesion synthesis is normal (i.e. indistinguishable from wild type). Error-free translesion synthesis a DNA repair process that results in the conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across from the lesion.","definition_xrefs":["PomBase:mah","GO:0070987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"normal error-free translesion synthesis","synonyms":[{"name":"normal error-free translesion synthesis during mitotic cell cycle","type":"related"},{"name":"normal error-free translesion synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0005325"}


id: PBO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHromodomain Protein","termid":"PBO:0001419"}


id: GO:0004462
data:
  {"annotated_genes":["SJAG_04726"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69765],"is_not":false,"summary":null,"term":"GO:0004462"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-S-lactoylglutathione = glutathione + methylglyoxal.","definition_xrefs":["RHEA:19069","EC:4.4.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactoylglutathione lyase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:GLYOXI-RXN","Reactome:R-HSA-5694071","KEGG_REACTION:R02530"],"synonyms":[{"name":"(R)-S-lactoylglutathione methylglyoxal-lyase (isomerizing) activity","type":"related"},{"name":"(R)-S-lactoylglutathione methylglyoxal-lyase (isomerizing; glutathione-forming)","type":"related"},{"name":"aldoketomutase activity","type":"related"},{"name":"glyoxalase I activity","type":"related"},{"name":"glyoxylase I","type":"related"},{"name":"ketone-aldehyde mutase activity","type":"related"},{"name":"methylglyoxalase activity","type":"related"}],"termid":"GO:0004462","terms_by_termid":{"GO:0004462":null}}


id: MONDO:0010048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia with myoclonic epilepsy","secondary_identifiers":["MESH:C564810","MEDGEN:338615","OMIM:270805","UMLS:C1849114"],"synonyms":[{"name":"spastic paraplegia with myoclonic epilepsy","type":"exact"}],"termid":"MONDO:0010048","xrefs":{"Monarch":{"xref_id":"0010048"}}}


id: GO:0003929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete RAN small monomeric GTPase activity (obsolete GO:0003929)","synonyms":[{"name":"RAN small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003929"}


id: MONDO:0004264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute endometritis","termid":"MONDO:0004265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute gonococcal endometritis","secondary_identifiers":["MEDGEN:509198","UMLS:C0153196","SCTID:65295003","DOID:7527","ICD9:098.16"],"synonyms":[{"name":"acute gonorrhea of uterus","type":"exact"},{"name":"acute gonorrhoea of uterus","type":"exact"},{"name":"gonococcal endometritis","type":"exact"},{"name":"gonococcal endometritis (acute)","type":"exact"},{"name":"uterus - acute gonorrhea","type":"exact"},{"name":"uterus - acute gonorrhoea","type":"exact"}],"termid":"MONDO:0004264","xrefs":{"Monarch":{"xref_id":"0004264"}}}


id: GO:0060544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:mtg_apoptosis","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed necrotic cell death","termid":"GO:0062098"},{"relation_name":"regulates","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of necroptotic process","secondary_identifiers":["Reactome:R-HSA-5675482"],"synonyms":[{"name":"regulation of necroptosis","type":"narrow"}],"termid":"GO:0060544"}


id: PBO:0060511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acyl phosphatidylethanolamine phospholipase D","termid":"PBO:0060511"}


id: FYPO:0006400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the frequency of DNA replication initiation is higher than normal at inefficient origins, i.e. replication origins that normally rarely fire.","definition_xrefs":["PMID:28903048","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased mitotic DNA replication initiation from inefficient origin","synonyms":[{"name":"increased DNA replication initiation from inefficient origin during mitotic cell cycle","type":"exact"},{"name":"increased DNA replication initiation from inefficient origin during vegetative growth","type":"exact"},{"name":"increased firing of inefficient replication origins","type":"exact"},{"name":"increased mitotic DNA replication initiation at inefficient origin","type":"exact"},{"name":"increased mitotic DNA replication initiation from inefficient replication origin","type":"related"}],"termid":"FYPO:0006400"}


id: PBO:0081355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 180","termid":"PBO:0081355"}


id: MONDO:0024280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An arthritis affecting five or more separate joints.","definition_xrefs":["NCIT:C26996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarticular arthritis","secondary_identifiers":["SCTID:416956002","UMLS:C0162323","MEDGEN:56408"],"synonyms":[{"name":"polyarthritis","type":"exact"},{"name":"polyarticular arthritis","type":"exact"}],"termid":"MONDO:0024280","xrefs":{"Monarch":{"xref_id":"0024280"}}}


id: PBO:0079524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosinase related protein 1","termid":"PBO:0079524"}


id: MONDO:0008369
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"}]},"cv_name":"mondo","definition":"Proximal renal tubular acidosis (pRTA) is a tubular kidney disease characterized by impaired ability of the proximal tubule to reabsorb bicarbonate from the glomerular filtrate leading to hyperchloremic metabolic acidosis.","definition_xrefs":["Orphanet:47159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular acidosis","termid":"MONDO:0001909"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"proximal renal tubular acidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0268435","SCTID:24790002","ICD9:588.89","MedDRA:10037080","GARD:16644","OMIM:179830","MEDGEN:82804"],"synonyms":[{"name":"RTA, proximal type","type":"related"},{"name":"RTA, rate type","type":"related"},{"name":"Type 2 RTA","type":"exact"},{"name":"Type 2 renal tubular acidosis","type":"exact"},{"name":"pRTA","type":"exact"},{"name":"renal tubular acidosis 2","type":"related"},{"name":"renal tubular acidosis type 2","type":"exact"},{"name":"renal tubular acidosis, proximal","type":"related"}],"termid":"MONDO:0008369","terms_by_termid":{"MONDO:0011422":null},"xrefs":{"Monarch":{"xref_id":"0008369"}}}


id: GO:0000050
data:
  {"annotated_genes":["SJAG_04577","SJAG_03398","SJAG_00412","SJAG_00635","SJAG_00392","SJAG_01461","SJAG_01019","SJAG_00035"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57685,57934,72245,94300,100045,108448,113042,120398],"is_not":false,"summary":null,"term":"GO:0000050"}]},"cv_name":"biological_process","definition":"The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosphate.","definition_xrefs":["GOC:vw","ISBN:0198506732","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea metabolic process","termid":"GO:0019627"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_03398":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0071941","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"urea cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006871","GO:0006594","Reactome:R-HSA-70635","Wikipedia:Urea_cycle"],"synonyms":[{"name":"ornithine cycle","type":"exact"},{"name":"urea biosynthesis","type":"exact"},{"name":"urea biosynthetic process","type":"exact"}],"termid":"GO:0000050","terms_by_termid":{"GO:0000050":null}}


id: PATO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An 1-D extent quality inhering in two-dimensional bearer by virtue of being equal to the distance around it.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Perimeter"],"direct_ancestors":[{"relation_name":"is_a","term_name":"length","termid":"PATO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perimeter","termid":"PATO:0001711"}


id: MONDO:0010145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tibia, absence of, with congenital deafness","secondary_identifiers":["OMIM:275230","MESH:C564764","MEDGEN:336413","UMLS:C1848758"],"synonyms":[{"name":"tibia, absence of, with congenital deafness","type":"exact"}],"termid":"MONDO:0010145","xrefs":{"Monarch":{"xref_id":"0010145"}}}


id: GO:0051941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of amino acid neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"amino acid neurotransmitter reuptake","termid":"GO:0051933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of amino acid uptake involved in synaptic transmission","synonyms":[{"name":"regulation of amino acid neurotransmitter reuptake","type":"exact"},{"name":"regulation of amino acid neurotransmitter uptake","type":"exact"},{"name":"regulation of amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051941"}


id: FYPO:0005734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate dehydrogenase activity using NAPD+ as a cofactor is decreased during a cellular response to iron ion starvation.","definition_xrefs":["PMID:20435771","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased glutamate dehydrogenase (NADP+) activity","termid":"FYPO:0000983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased glutamate dehydrogenase (NADP+) activity during cellular response to iron ion starvation","synonyms":[{"name":"decreased NAD(P)H-dependent glutamate dehydrogenase activity during cellular response to iron ion starvation","type":"exact"},{"name":"decreased NADP-GDH activity during cellular response to iron ion starvation","type":"exact"},{"name":"decreased glutamate dehydrogenase (NADP+) activity during iron ion starvation","type":"exact"}],"termid":"FYPO:0005734"}


id: FYPO:0001405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A colony morphology phenotype in which a colony growing on a solid surface has an abnormally glossy surface.","definition_xrefs":["PomBase:mp","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal colony morphology","termid":"FYPO:0000150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"glossy colony morphology","synonyms":[{"name":"smooth colony morphology","type":"related"}],"termid":"FYPO:0001405"}


id: PBO:0061906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optineurin","termid":"PBO:0061906"}


id: GO:0010688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes mediated by RNA polymerase II.","definition_xrefs":["GOC:dph","GOC:tb","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0060962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","synonyms":[{"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0010688"}


id: PBO:0091351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial expression network (MIOREX) component Mrx11","termid":"PBO:0091351"}


id: MOD:01558
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01558"}


id: GO:0004318
data:
  {"annotated_genes":["SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60266],"is_not":false,"summary":null,"term":"GO:0004318"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2,3-saturated acyl-[ACP] + NAD+ = a (2E)-enoyl-[ACP] + H+ + NADH.","definition_xrefs":["RHEA:10240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enoyl-[acyl-carrier-protein] reductase [NAD(P)H] activity","termid":"GO:0016631"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:ENOYL-ACP-REDUCT-NADH-RXN","EC:1.3.1.9"],"synonyms":[{"name":"NADH-enoyl acyl carrier protein reductase activity","type":"related"},{"name":"NADH-specific enoyl-ACP reductase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:NAD+ oxidoreductase","type":"related"},{"name":"enoyl-ACP reductase (NADH) activity","type":"related"},{"name":"enoyl-[acyl-carrier protein] reductase (NADH) activity","type":"related"},{"name":"enoyl-acyl-carrier-protein reductase (NADH)","type":"related"}],"termid":"GO:0004318","terms_by_termid":{"GO:0004318":null}}


id: PBO:0089235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial nuclease Lcl3, implicated in DNA repair","termid":"PBO:0089235"}


id: FYPO:0007081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that begins with the nucleation of microtubules from each SPB within the nucleus, and normally occurs as part of the first meiotic nuclear division, does not occur.","definition_xrefs":["PomBase:mah","PMID:31532702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal initial meiotic spindle pole body separation in meiosis I","termid":"FYPO:0007080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000054"],"is_obsolete":false,"name":"abolished initial meiotic spindle pole body separation in meiosis I","synonyms":[{"name":"abolished initial meiotic spindle pole body separation in first meiotic nuclear division","type":"exact"},{"name":"abolished initial mitotic SPB separation in meiosis I","type":"exact"},{"name":"abolished meiotic spindle pole body separation during meiosis I","type":"exact"},{"name":"initial meiotic spindle pole body separation in meiosis I abolished","type":"exact"}],"termid":"FYPO:0007081"}


id: GO:0019414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An aerobic respiration process in which a sulfur-containing molecule (hydrogen sulfide, sulfur, sulfite, thiosulfate, and various polythionates) is oxidized.","definition_xrefs":["PMID:11425697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration, using sulfur or sulfate as electron donor","synonyms":[{"name":"aerobic respiration, using sulphur or sulphate as electron donor","type":"exact"}],"termid":"GO:0019414"}


id: PBO:0018264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex SMC subunit Smc4","termid":"PBO:0018264"}


id: SO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is mono- methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K79_methylation_site","termid":"SO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_monomethylation_site","synonyms":[{"name":"H3K79 mono-methylation site","type":"exact"},{"name":"H3K79me1","type":"related"}],"termid":"SO:0001710"}


id: PBO:0036243
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli PyrB","termid":"PBO:0036243"}


id: MONDO:0035838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Castleman disease","termid":"MONDO:0015564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"idiopathic multicentric Castleman disease","secondary_identifiers":["Orphanet:570431","GARD:22309","MEDGEN:1680858","UMLS:C5197665"],"synonyms":[{"name":"HHV-8-negative multicentric Castleman disease","type":"exact"},{"name":"Human herpesvirus-8-negative multicentric Castleman disease","type":"exact"}],"termid":"MONDO:0035838","xrefs":{"Monarch":{"xref_id":"0035838"}}}


id: GO:1990195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bacterial transmembrane transporter complex that spans the entire cell membrane system and possesses ATP-dependent xenobiotic transport activity pumping drugs (typically antibiotics) and other toxins directly from the cytosol out of the bacterial cell. Typically, it is trimeric consisting of a inner membrane ATPase (IMP), a periplasmic membrane fusion protein (MFP) and an outer membrane factor (OMF). In E. coli, macrolide transporter complexes may consists of MacB (IMP), MacA (MFP) and TolC (OMF) or AcrB (IMP), AcrA (MFP) and TolC (OMF). Trimeric TolC is a common OMF found in many macrolide transporter complexes.","definition_xrefs":["GOC:bhm","PMID:10879525","PMID:18955484","PMID:19254725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"macrolide transmembrane transporter complex","synonyms":[{"name":"AcrAB-TolC complex","type":"narrow"},{"name":"MacAB-TolC complex","type":"narrow"},{"name":"macrolide transporter","type":"related"},{"name":"macrolide transporter complex","type":"broad"}],"termid":"GO:1990195"}


id: PBO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy C terminal domain family protein (predicted)","termid":"PBO:0000410"}


id: PBO:0041169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 3 pseudogene 1","termid":"PBO:0041169"}


id: PBO:0070444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 1","termid":"PBO:0070444"}


id: GO:0120313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oocyte karyosome formation, the chromosome organization process in which meiotic chromosomes in the oocyte nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:33382409","GOC:ha","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"oocyte karyosome formation","termid":"GO:0030717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of oocyte karyosome formation","termid":"GO:0120313"}


id: MONDO:0008095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A capillary vascular anomaly that is characterized by hypopigmented macules.","definition_xrefs":["NCIT:C3943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular ectasia","termid":"MONDO:0021658"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nevus anemicus","secondary_identifiers":["SCTID:40929003","UMLS:C0265982","HP:0025105","ICD9:709.09","MEDGEN:82725","OMIM:163050"],"synonyms":[{"name":"NEVUS anemicus","type":"related"},{"name":"Nevus anemicus","type":"exact"},{"name":"anemicus Nevus","type":"exact"},{"name":"nevus anemicus (disease)","type":"exact"}],"termid":"MONDO:0008095","xrefs":{"Monarch":{"xref_id":"0008095"}}}


id: PR:P38937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut8 gene.","definition_xrefs":["UniProtKB:P38937","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tethering factor for nuclear proteasome cut8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.13c","synonyms":[{"name":"Spom972h-cut8","type":"exact"},{"name":"cell untimely torn protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P38937"}


id: PBO:0062796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL1 pseudogene 1","termid":"PBO:0062796"}


id: GO:0061719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucose into pyruvate, with the concomitant production of a small amount of ATP and the utilization of ADP in the initial kinase reactions.","definition_xrefs":["MetaCyc:P341-PWY","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"glucose catabolic process to pyruvate utilizing ADP","termid":"GO:0061719"}


id: GO:0045164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Secretin is a hormone that takes part in the digestion process. It also has effects on organs other than gastrointestinal tract.","definition_xrefs":["PMID:11320551"],"gene_count":0,"genotype_count":0,"name":"obsolete secretin (sensu Mammalia) (obsolete GO:0045164)","synonyms":[{"name":"secretin (sensu Mammalia)","type":"exact"}],"termid":"GO:0045164"}


id: PBO:0004209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, MARCH family (predicted)","termid":"PBO:0004209"}


id: GO:0052748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: baicalin + H2O = baicalein + D-glucuronate.","definition_xrefs":["RHEA:28130","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"baicalin beta-D-glucuronidase activity","secondary_identifiers":["MetaCyc:RXN-11760","EC:3.2.1.167","KEGG_REACTION:R09533"],"synonyms":[{"name":"5,6,7-trihydroxyflavone-7-O-beta-D-glucupyranosiduronate glucuronosylhydrolase activity","type":"related"},{"name":"baicalinase activity","type":"broad"}],"termid":"GO:0052748"}


id: MOD:02033
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(5) HexNAc(3)","definition_xrefs":["Unimod:1484","PubMed:33135055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"dHex1Hex5HexNAc3 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(5) HexNAc(3)","type":"related"}],"termid":"MOD:02033"}


id: MONDO:1012347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facial eczema, non-human animal","termid":"MONDO:1011746"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial eczema, sheep","secondary_identifiers":["OMIA:001276-9940"],"termid":"MONDO:1012347","xrefs":{"Monarch":{"xref_id":"1012347"}}}


id: MONDO:1011442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Enteropathy-associated T cell lymphoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, non-human animal","termid":"MONDO:1010214"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enteropathy-associated T cell lymphoma, non-human animal","secondary_identifiers":["OMIA:002526"],"termid":"MONDO:1011442","xrefs":{"Monarch":{"xref_id":"1011442"}}}


id: MONDO:0011077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, corpus callosum dysgenesis, and cleft lip/palate","secondary_identifiers":["UMLS:C1832369","MESH:C537547","MEDGEN:330448","OMIM:601420"],"synonyms":[{"name":"corpus callosum dysgenesis, microcephaly, infantile spasm, cleft lip-palate, exophthalmos and psychomotor retardation","type":"related"},{"name":"microcephaly, corpus callosum dysgenesis and cleft lip-palate","type":"related"},{"name":"microcephaly, corpus callosum dysgenesis, and cleft lip/palate","type":"exact"},{"name":"microcephaly, facial clefting, and preaxial polydactyly","type":"related"}],"termid":"MONDO:0011077","xrefs":{"Monarch":{"xref_id":"0011077"}}}


id: PBO:0064944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRC2 and DDX5 associated lncRNA","termid":"PBO:0064944"}


id: SO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Similarity due to common ancestry.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved","termid":"SO:0000856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous","termid":"SO:0000857"}


id: MONDO:0014192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the ZMYND10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 22","secondary_identifiers":["DOID:0110597","GARD:15968","OMIM:615444","UMLS:C3809543","MEDGEN:815873"],"synonyms":[{"name":"CILD22","type":"exact"},{"name":"ZMYND10 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 22","type":"related"},{"name":"ciliary dyskinesia, primary, 22, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 22","type":"exact"},{"name":"primary ciliary dyskinesia 22 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in ZMYND10","type":"exact"},{"name":"primary ciliary dyskinesia type 22","type":"exact"}],"termid":"MONDO:0014192","xrefs":{"Monarch":{"xref_id":"0014192"}}}


id: GO:0030087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex (obsolete GO:0030087)","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex","type":"exact"}],"termid":"GO:0030087"}


id: GO:0098912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which atrial cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane depolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"atrial cardiac muscle cell depolarization","type":"broad"},{"name":"atrial depolarization","type":"related"},{"name":"electrocardiogram PR interval","type":"related"}],"termid":"GO:0098912"}


id: PBO:0085357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphopantetheine:protein transferase (PPTase); activates mitochondrial acyl carrier protein (Acp1p) by phosphopantetheinylation","termid":"PBO:0085357"}


id: MONDO:0001666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinal dystrophy with etiology arising from Bruch's membrane, the site of drusen generation.","definition_xrefs":["PMID:19747980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic choroid disorder","termid":"MONDO:0001898"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal dystrophies primarily involving Bruch's membrane","secondary_identifiers":["DOID:13227","UMLS:C0154866","MEDGEN:1720702","ICD9:362.77"],"synonyms":[{"name":"Bruch's membrane inherited retinal dystrophy","type":"exact"},{"name":"inherited retinal dystrophy of Bruch's membrane","type":"exact"},{"name":"retinal dystrophies primarily involving Bruch membrane","type":"exact"}],"termid":"MONDO:0001666","xrefs":{"Monarch":{"xref_id":"0001666"}}}


id: MONDO:0012006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis with ocular abnormalities and hallucal defects","secondary_identifiers":["OMIM:608279","MEDGEN:331266","MESH:C564263","UMLS:C1842316"],"synonyms":[{"name":"craniosynostosis with ocular abnormalities and hallucal defects","type":"exact"}],"termid":"MONDO:0012006","xrefs":{"Monarch":{"xref_id":"0012006"}}}


id: PBO:0077832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p73","termid":"PBO:0077832"}


id: PR:P50530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sck1 gene.","definition_xrefs":["UniProtKB:P50530","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase sck1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B9.02c","synonyms":[{"name":"Spom972h-sck1","type":"exact"}],"termid":"PR:P50530"}


id: PBO:0027418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_Golgi_apparatus","termid":"PBO:0027418"}


id: GO:0034288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a disaccharide is received and converted into a molecular signal.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbohydrate stimulus","termid":"GO:0009730"},{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of disaccharide stimulus","synonyms":[{"name":"perception of disaccharide stimulus","type":"related"}],"termid":"GO:0034288"}


id: PBO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC domain protein","termid":"PBO:0002326"}


id: GO:1904701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Wnt-Frizzled-LRP5/6 complex.","definition_xrefs":["GO_REF:0000079","GOC:PARL","PMID:11448771","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"Wnt-Frizzled-LRP5/6 complex assembly","synonyms":[{"name":"Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"Frizzled-LRP5/6 complex formation","type":"related"},{"name":"WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"Wnt receptor complex assembly","type":"broad"},{"name":"Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"}],"termid":"GO:1904701"}


id: PBO:0083706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-localized protein of unknown function","termid":"PBO:0083706"}


id: MONDO:0026157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic pigmentation anomaly of the skin (obsolete MONDO:0026157)","secondary_identifiers":["Orphanet:183463"],"termid":"MONDO:0026157","xrefs":{"Monarch":{"xref_id":"0026157"}}}


id: PBO:0044862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in esophageal cancer 1","termid":"PBO:0044862"}


id: PBO:0000715
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target genes transcriptionally co-regulated by Mcs6","termid":"PBO:0000715"}


id: GO:2000641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early endosome to late endosome transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"early endosome to late endosome transport","termid":"GO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of early endosome to late endosome transport","termid":"GO:2000641"}


id: GO:0019051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a viral gene product activates host apoptosis, leading to an increase in the frequency, rate or extent of apoptosis in the host cell.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host apoptotic process (obsolete GO:0019051)","synonyms":[{"name":"activation by virus of host apoptosis","type":"exact"},{"name":"activation by virus of host apoptotic programmed cell death","type":"exact"},{"name":"activation of apoptosis in host by virus","type":"exact"},{"name":"activation of host caspases by virus","type":"narrow"},{"name":"induction by virus of host apoptosis","type":"narrow"},{"name":"induction by virus of host apoptotic programmed cell death","type":"exact"},{"name":"induction by virus of host caspase activity","type":"narrow"},{"name":"induction by virus of host cysteine-type endopeptidase activity involved in apoptotic process","type":"narrow"},{"name":"induction of apoptosis in host by virus","type":"exact"},{"name":"positive regulation of apoptosis by virus","type":"narrow"},{"name":"positive regulation of apoptotic process by virus","type":"exact"}],"termid":"GO:0019051"}


id: PR:O94384
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ely5 gene.","definition_xrefs":["UniProtKB:O94384","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein ely5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.06c","synonyms":[{"name":"Spom972h-ely5","type":"exact"}],"termid":"PR:O94384"}


id: PATO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being distributed or spread over a considerable extent.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispersed","termid":"PATO:0001630"}


id: FYPO:0007732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes that can be transcribed by RNA polymerase III is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal condensin localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"narrow"},{"name":"normal protein localisation to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to chromatin downstream of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007732"}


id: PBO:0054307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1699","termid":"PBO:0054307"}


id: PBO:0088891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD homolog","termid":"PBO:0088891"}


id: PBO:0052511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 25","termid":"PBO:0052511"}


id: MONDO:0001657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the brain.","definition_xrefs":["NCIT:C3568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain cancer","secondary_identifiers":["MEDGEN:57796","ICD9:239.6","UMLS:C0153633","CSP:2006-2736","ICD9:191.8","DOID:1319","NCIT:C4952","ICD9:191","ICD9:191.9","MESH:D001932","SCTID:428061005"],"synonyms":[{"name":"BT - brain tumor","type":"related"},{"name":"BT - brain tumour","type":"related"},{"name":"adult brain tumor","type":"narrow"},{"name":"adult brain tumour","type":"narrow"},{"name":"adult malignant brain neoplasm","type":"narrow"},{"name":"brain cancer","type":"exact"},{"name":"brain neoplasm","type":"broad"},{"name":"brain neoplasm, adult","type":"related"},{"name":"brain neoplasms, malignant","type":"exact"},{"name":"brain tumor, adult","type":"related"},{"name":"cancer of brain","type":"exact"},{"name":"cancer of the brain","type":"exact"},{"name":"malignant brain neoplasm","type":"exact"},{"name":"malignant brain tumor","type":"exact"},{"name":"malignant brain tumour","type":"exact"},{"name":"malignant neoplasm of brain","type":"exact"},{"name":"malignant neoplasm of the brain","type":"exact"},{"name":"malignant primary brain neoplasm","type":"narrow"},{"name":"malignant primary brain tumor","type":"narrow"},{"name":"malignant primary brain tumour","type":"narrow"},{"name":"malignant tumor of adult brain","type":"narrow"},{"name":"malignant tumor of brain","type":"exact"},{"name":"malignant tumor of the brain","type":"exact"},{"name":"malignant tumour of adult brain","type":"narrow"},{"name":"malignant tumour of brain","type":"exact"},{"name":"malignant tumour of the brain","type":"exact"},{"name":"neoplasm of unspecified nature of brain","type":"related"},{"name":"primary brain neoplasm","type":"related"},{"name":"primary brain tumor","type":"related"},{"name":"primary brain tumour","type":"related"},{"name":"primary malignant neoplasm of brain","type":"exact"},{"name":"tumor of the brain","type":"broad"},{"name":"tumour of the brain","type":"broad"}],"termid":"MONDO:0001657","xrefs":{"Monarch":{"xref_id":"0001657"}}}


id: PBO:0052809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 75","termid":"PBO:0052809"}


id: PBO:0087255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in regulation of ion transport across plasma membrane; carboxyl terminus is essential for glucose-dependent Pma1p activation via phosphorylation of Pma1p-Ser899; enhances spermine uptake; PTK2 has a paralog, PTK1, that arose from the whole genome duplication","termid":"PBO:0087255"}


id: PR:O60163
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine-sensitive aspartokinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.04","secondary_identifiers":["UniProtKB:O60163"],"synonyms":[{"name":"Spom972h-lysC","type":"exact"},{"name":"aspartate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60163"}


id: PBO:0015702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair ligase Lig4","termid":"PBO:0015702"}


id: PBO:0073308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 4","termid":"PBO:0073308"}


id: MONDO:0030993
data:
  {"annotated_genes":["SJAG_00303","SJAG_00336","SJAG_03542"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88636,88637,88638],"is_not":false,"summary":null,"term":"MONDO:0030993"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Tessadori-Van-Haaften neurodevelopmental syndrome","termid":"MONDO:0031400"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00303":null,"SJAG_00336":null,"SJAG_03542":null},"genotype_count":0,"is_obsolete":false,"name":"Tessadori-Van Haaften neurodevelopmental syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824083","OMIM:619950","UMLS:C5774310"],"synonyms":[{"name":"TEVANED3","type":"exact"},{"name":"Tessadori-Van Haaften neurodevelopmental syndrome 3","type":"exact"}],"termid":"MONDO:0030993","terms_by_termid":{"MONDO:0030993":null},"xrefs":{"Monarch":{"xref_id":"0030993"}}}


id: PBO:0025497
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic Trna thioUridilase","termid":"PBO:0025497"}


id: PBO:0036174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate_dehydrogenase_(NADP+)_activity_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0036174"}


id: GO:0015538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sialate(out) + H+(out) = sialate(in) + H+(in).","definition_xrefs":["TC:2.A.1.12.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sialic acid:proton symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-25","RHEA:28987","Reactome:R-HSA-428585","Reactome:R-HSA-5624239"],"synonyms":[{"name":"sialic acid permease activity","type":"related"},{"name":"sialic acid:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015538"}


id: GO:0032984
data:
  {"annotated_genes":["SJAG_04038","SJAG_01252","SJAG_02700","SJAG_02624","SJAG_01696","SJAG_01653","SJAG_03301","SJAG_02414","SJAG_02812","SJAG_03345","SJAG_01297","SJAG_04312","SJAG_03126","SJAG_02704","SJAG_00840","SJAG_02699","SJAG_00308","SJAG_01993","SJAG_00723","SJAG_04841","SJAG_00286","SJAG_02336","SJAG_02314","SJAG_00597","SJAG_04283","SJAG_02189","SJAG_02560","SJAG_01224","SJAG_00642","SJAG_05025","SJAG_03025","SJAG_01894","SJAG_06309","SJAG_00338","SJAG_05265","SJAG_02601","SJAG_01518","SJAG_03949","SJAG_02433","SJAG_03380","SJAG_00330","SJAG_04909","SJAG_03658","SJAG_00206","SJAG_05221","SJAG_05296","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71844,75127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[78023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[77378,72260,73836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097352"},{"annotations":[96481],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[77311,81986,94165,80929],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[81526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"},{"annotations":[111108,96665,118010,111109,60359,60773,75600,98355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002184"},{"annotations":[62586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903259"},{"annotations":[100495,120149,91444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[97799,103966,97362,100524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070126"},{"annotations":[105564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[118890,98957,91888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"},{"annotations":[63010,69365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[99498],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[103747],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031117"},{"annotations":[113928],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904595"},{"annotations":[78305,67807,70286],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045905"},{"annotations":[75778],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006449"},{"annotations":[57516,78244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035494"},{"annotations":[57277,64563,80449,89587,76657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000390"},{"annotations":[79209,62687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006415"}]},"cv_name":"biological_process","definition":"The disaggregation of a protein-containing macromolecular complex into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00206":null,"SJAG_00279":null,"SJAG_00286":null,"SJAG_00308":null,"SJAG_00330":null,"SJAG_00338":null,"SJAG_00597":null,"SJAG_00642":null,"SJAG_00723":null,"SJAG_00840":null,"SJAG_01224":null,"SJAG_01252":null,"SJAG_01297":null,"SJAG_01518":null,"SJAG_01653":null,"SJAG_01696":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02189":null,"SJAG_02314":null,"SJAG_02336":null,"SJAG_02414":null,"SJAG_02433":null,"SJAG_02560":null,"SJAG_02601":null,"SJAG_02624":null,"SJAG_02699":null,"SJAG_02700":null,"SJAG_02704":null,"SJAG_02812":null,"SJAG_03025":null,"SJAG_03126":null,"SJAG_03301":null,"SJAG_03345":null,"SJAG_03380":null,"SJAG_03658":null,"SJAG_03949":null,"SJAG_04038":null,"SJAG_04283":null,"SJAG_04312":null,"SJAG_04841":null,"SJAG_04909":null,"SJAG_05025":null,"SJAG_05221":null,"SJAG_05265":null,"SJAG_05296":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-containing complex disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0043624","GO:0034623","GO:0043241"],"synonyms":[{"name":"cellular macromolecule complex disassembly","type":"related"},{"name":"cellular protein complex disassembly","type":"related"},{"name":"macromolecule complex disassembly","type":"related"},{"name":"protein complex disassembly","type":"exact"}],"termid":"GO:0032984","terms_by_termid":{"GO:0000390":null,"GO:0002184":null,"GO:0006337":null,"GO:0006415":null,"GO:0006449":null,"GO:0007019":null,"GO:0016240":null,"GO:0030042":null,"GO:0031117":null,"GO:0035494":null,"GO:0045905":null,"GO:0051016":null,"GO:0060172":null,"GO:0070126":null,"GO:0070462":null,"GO:0072318":null,"GO:0097352":null,"GO:0140516":null,"GO:1901098":null,"GO:1903259":null,"GO:1904595":null}}


id: MONDO:1012980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucolipidosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipidosis, non-human animal","termid":"MONDO:1012980","xrefs":{"Monarch":{"xref_id":"1012980"}}}


id: GO:0097096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which any suture between facial bones is generated and organized.","definition_xrefs":["Wikipedia:Cranial_sutures","GOC:pr","GOC:sl","Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial suture morphogenesis","termid":"GO:0097094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial suture morphogenesis","termid":"GO:0097096"}


id: PBO:0063235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha cluster, complex locus","termid":"PBO:0063235"}


id: GO:0047918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-mannose = GDP-L-galactose.","definition_xrefs":["PMID:8910301","PMID:16366586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"GDP-mannose 3,5-epimerase activity","secondary_identifiers":["EC:5.1.3.18","MetaCyc:RXN-7772"],"synonyms":[{"name":"GDP-D-mannose:GDP-L-galactose epimerase activity","type":"related"},{"name":"GDPmannose 3,5-epimerase activity","type":"related"},{"name":"guanosine 5'-diphosphate D-mannose:guanosine 5'-diphosphate L-galactose epimerase activity","type":"related"}],"termid":"GO:0047918"}


id: MONDO:0011725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 Crigler-Najjar syndrome (CNS2) is a hereditary disorder of bilirubin metabolism characterized by unconjugated hyperbilirubinemia due to reduced and inducible activity of hepatic bilirubin glucuronosyltransferase (GT). CNS2 is a milder form of CNS than CNS1.","definition_xrefs":["Orphanet:79235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Crigler-Najjar syndrome","termid":"MONDO:0009044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Crigler-Najjar syndrome type 2","secondary_identifiers":["MedDRA:10011387","icd11.foundation:846453488","MEDGEN:419718","OMIM:606785","UMLS:C2931132","MESH:C536213","SCTID:68067009","GARD:8683"],"synonyms":[{"name":"Arias syndrome","type":"exact"},{"name":"Crigler Najjar syndrome, type 2","type":"related"},{"name":"Crigler-Najjar syndrome, type 2","type":"related"},{"name":"Crigler-Najjar syndrome, type II","type":"related"},{"name":"UGT deficiency type 2","type":"exact"},{"name":"bilirubin uridinediphosphate glucuronosyltransferase deficiency type 2","type":"exact"},{"name":"bilirubin-UGT deficiency type 2","type":"exact"},{"name":"hereditary unconjugated hyperbilirubinemia type 2","type":"exact"},{"name":"hyperbilirubinemia, Crigler-Najjar type 2","type":"related"}],"termid":"MONDO:0011725","xrefs":{"Monarch":{"xref_id":"0011725"}}}


id: MONDO:0008123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of omodysplasia.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"omodysplasia","termid":"MONDO:0017136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant omodysplasia","secondary_identifiers":["icd11.foundation:1237796148","Orphanet:93328","OMIM:164745","MESH:C567664","DOID:0080845","MEDGEN:413823","UMLS:C2750355","SCTID:725165009","GARD:3643"],"synonyms":[{"name":"OMOD2","type":"related"},{"name":"omodysplasia 2","type":"related"},{"name":"omodysplasia, autosomal dominant","type":"exact"}],"termid":"MONDO:0008123","xrefs":{"Monarch":{"xref_id":"0008123"}}}


id: PATO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A length quality which is equal to the length of any straight line segment that passes through the center of a circle and whose endpoints are on the circular boundary.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Diameter"],"direct_ancestors":[{"relation_name":"is_a","term_name":"length","termid":"PATO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diameter","termid":"PATO:0001334"}


id: PBO:0059087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC family CW-type zinc finger 1","termid":"PBO:0059087"}


id: FYPO:0002189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, is shaped in the form of a spheroid, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"},{"relation_name":"is_a","term_name":"viable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001510"},{"relation_name":"is_a","term_name":"viable spheroid vegetative cell","termid":"FYPO:0002380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"viable normal volume spheroid vegetative cell","synonyms":[{"name":"viable normal volume rounded vegetative cell","type":"exact"},{"name":"viable normal volume spheroid cell during vegetative growth","type":"exact"},{"name":"viable normal volume spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002189"}


id: MONDO:0018348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polyglucosan body myopathy type 1 (obsolete MONDO:0018348)","secondary_identifiers":["NANDO:2200456"],"termid":"MONDO:0018348","xrefs":{"Monarch":{"xref_id":"0018348"}}}


id: GO:1901532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"regulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901532"}


id: GO:0102849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-18:3-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-18:3-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-18:3-digalactosyldiacylglycerol desaturase activity (obsolete GO:0102849)","termid":"GO:0102849"}


id: PR:Q9UT32
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal L1 domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein C8F11.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.04","secondary_identifiers":["UniProtKB:Q9UT32"],"synonyms":[{"name":"Spom972h-RSL1D1","type":"exact"},{"name":"U3 snoRNP-associated protein C8F11.04 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT32"}


id: PBO:0030576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_methionine_level","termid":"PBO:0030576"}


id: GO:0051877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dispersed pigment granules towards the center of the cell.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pigment granule aggregation in cell center","termid":"GO:0051877"}


id: MONDO:0006814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the iris.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iris disorder","termid":"MONDO:0002289"},{"relation_name":"is_a","term_name":"uveitis","termid":"MONDO:0020283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"iritis","secondary_identifiers":["MedDRA:10022955","EFO:1000997","SCTID:65074000","HP:0001101","DOID:1406","MEDGEN:7160","MESH:D007500","NCIT:C50621","UMLS:C0022081"],"synonyms":[{"name":"inflammation of iris","type":"exact"},{"name":"iris inflammation","type":"exact"},{"name":"iritis","type":"exact"},{"name":"iritis (disease)","type":"exact"}],"termid":"MONDO:0006814","xrefs":{"Monarch":{"xref_id":"0006814"}}}


id: GO:1903753
data:
  {"annotated_genes":["SJAG_04825","SJAG_05000","SJAG_02013","SJAG_02000","SJAG_03893","SJAG_03185"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93502,96894,97834,101319,119070,120327],"is_not":false,"summary":null,"term":"GO:1903753"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of p38MAPK cascade.","definition_xrefs":["PMID:18681888","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of p38MAPK cascade","termid":"GO:1900744"},{"relation_name":"negatively_regulates","term_name":"p38MAPK cascade","termid":"GO:0038066"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02000":null,"SJAG_02013":null,"SJAG_03185":null,"SJAG_03893":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of p38MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of p38 MAPK cascade","type":"exact"},{"name":"down regulation of p38 cascade","type":"exact"},{"name":"down regulation of p38MAPK cascade","type":"exact"},{"name":"down-regulation of p38 MAPK cascade","type":"exact"},{"name":"down-regulation of p38 cascade","type":"exact"},{"name":"down-regulation of p38MAPK cascade","type":"exact"},{"name":"downregulation of p38 MAPK cascade","type":"exact"},{"name":"downregulation of p38 cascade","type":"exact"},{"name":"downregulation of p38MAPK cascade","type":"exact"},{"name":"inhibition of p38 MAPK cascade","type":"narrow"},{"name":"inhibition of p38 cascade","type":"narrow"},{"name":"inhibition of p38MAPK cascade","type":"narrow"},{"name":"negative regulation of osmosensory signaling MAPK cascade","type":"narrow"},{"name":"negative regulation of p38 MAPK cascade","type":"exact"},{"name":"negative regulation of p38 cascade","type":"exact"}],"termid":"GO:1903753","terms_by_termid":{"GO:1903753":null}}


id: MONDO:0013189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by repetitive pulling out of one's hair resulting in noticeable hair loss; the individual experiences a rising subjective sense of tension before pulling out the hair and a sense of gratification or relief when pulling out the hair.","definition_xrefs":["NCIT:C94336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichotillomania","secondary_identifiers":["ICD10CM:F63.3","icd11.foundation:1253999657","OMIM:613229","UMLS:C0040953","MEDGEN:21654","MESH:D014256","SCTID:17155009","ICD9:312.39","DOID:0050587"],"synonyms":[{"name":"TTM","type":"related"},{"name":"trichotillomania","type":"exact"},{"name":"trichotillomania, multifactorial","type":"exact"}],"termid":"MONDO:0013189","xrefs":{"Monarch":{"xref_id":"0013189"}}}


id: MONDO:1011048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome, non-human animal","termid":"MONDO:1010261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrotic syndrome, domestic cat","secondary_identifiers":["OMIA:000712-9685"],"termid":"MONDO:1011048","xrefs":{"Monarch":{"xref_id":"1011048"}}}


id: GO:0060328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based movement by which cytoplasmic actin filaments slide past one another resulting in a contraction that propels the cell in the direction that has been defined as the front of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic actin-based contraction involved in forward cell motility","synonyms":[{"name":"cytoplasmic actin-based contraction involved in forward cell locomotion","type":"related"}],"termid":"GO:0060328"}


id: GO:0044169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the host cell rough endoplasmic reticulum.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endoplasmic reticulum membrane","termid":"GO:0044167"},{"relation_name":"part_of","term_name":"host cell rough endoplasmic reticulum","termid":"GO:0044168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell rough endoplasmic reticulum membrane","synonyms":[{"name":"host rough endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0044169"}


id: GO:0000471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage within the 3'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. In S. cerevisiae, endonucleolytic cleavage within the 3'-ETS of the pre-RNA, which may occur cotranscriptionally, is the first step in rRNA processing, and initiates a cascade of subsequent processing and modification events.","definition_xrefs":["PMID:10690410","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"endonucleolytic cleavage in 3'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000471"}


id: GO:0018118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine by covalent addition of glutathione to form peptidyl-L-cysteine glutathione disulfide.","definition_xrefs":["RESID:AA0229"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-cysteine glutathione disulfide biosynthetic process from peptidyl-cysteine (obsolete GO:0018118)","synonyms":[{"name":"peptidyl-L-cysteine glutathione disulfide anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulfide formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulfide synthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulphide biosynthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulphide biosynthetic process from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018118"}


id: GO:0051902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial depolarization","termid":"GO:0051900"},{"relation_name":"is_a","term_name":"negative regulation of membrane depolarization","termid":"GO:1904180"},{"relation_name":"negatively_regulates","term_name":"mitochondrial depolarization","termid":"GO:0051882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial depolarization","synonyms":[{"name":"down regulation of mitochondrial depolarization","type":"exact"},{"name":"down-regulation of mitochondrial depolarization","type":"exact"},{"name":"downregulation of mitochondrial depolarization","type":"exact"},{"name":"inhibition of mitochondrial depolarization","type":"narrow"}],"termid":"GO:0051902"}


id: PBO:0074976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-18","termid":"PBO:0074976"}


id: PBO:0057993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3917","termid":"PBO:0057993"}


id: PR:Q9UUL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad57 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUL2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp57 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.07","synonyms":[{"name":"RAD57 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad57","type":"exact"}],"termid":"PR:Q9UUL2"}


id: GO:0015737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which galacturonate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexuronate transmembrane transport","termid":"GO:0015736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"galacturonate transmembrane transport","synonyms":[{"name":"galacturonate transport","type":"related"}],"termid":"GO:0015737"}


id: GO:1990427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron-dense plaque at either end of a stereocilia tip link that provides the anchor in the stereocilia membrane.","definition_xrefs":["PMID:19447093","PMID:21709241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilia tip link","termid":"GO:0002140"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia tip-link density","termid":"GO:1990427"}


id: PBO:0067513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 654, pseudogene","termid":"PBO:0067513"}


id: MONDO:0019956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute inflammatory process affecting the brain parenchyma. Causes include viral infections and less frequently bacterial infections, toxins, and immune-mediated processes.","definition_xrefs":["NCIT:C26760"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalitis","secondary_identifiers":["ICD9:323.9","MEDGEN:4027","ICD9:323.0","DOID:9588","ICD9:323.8","MESH:D004660","MedDRA:10014581","ICD10CM:A85","UMLS:C0014038","Orphanet:97275","SCTID:45170000"],"synonyms":[{"name":"brain inflammation","type":"broad"}],"termid":"MONDO:0019956","xrefs":{"Monarch":{"xref_id":"0019956"}}}


id: FYPO:0003639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall biogenesis is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished cell wall biogenesis","synonyms":[{"name":"abolished fungal-type cell wall biogenesis","type":"exact"},{"name":"fungal-type cell wall biogenesis abolished","type":"exact"}],"termid":"FYPO:0003639"}


id: GO:0010063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that induces or promotes trichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trichoblast fate specification","termid":"GO:0010061"},{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"positive regulation of plant epidermal cell differentiation","termid":"GO:1903890"},{"relation_name":"positively_regulates","term_name":"trichoblast fate specification","termid":"GO:0010057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of trichoblast fate specification","synonyms":[{"name":"activation of trichoblast fate","type":"narrow"},{"name":"stimulation of trichoblast fate","type":"narrow"},{"name":"up regulation of trichoblast fate","type":"exact"},{"name":"up-regulation of trichoblast fate","type":"exact"},{"name":"upregulation of trichoblast fate","type":"exact"}],"termid":"GO:0010063"}


id: GO:0043634
data:
  {"annotated_genes":["SJAG_16455","SJAG_03984","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78079,101493,115237],"is_not":false,"summary":null,"term":"GO:0043634"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a noncoding RNA (ncRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target ncRNA.","definition_xrefs":["GOC:krc","GOC:dgf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation-dependent RNA catabolic process","termid":"GO:0043633"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_03984":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyadenylation-dependent ncRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(A)-dependent ncRNA catabolic process","type":"related"}],"termid":"GO:0043634","terms_by_termid":{"GO:0043634":null}}


id: GO:0042082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a glycosylsphingolipidinositol (GSI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The sphingolipid group is linked, via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via a ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GSI anchors have variants on this canonical linkage.","definition_xrefs":["GOC:go_curators","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete GSI anchor biosynthetic process (obsolete GO:0042082)","synonyms":[{"name":"GPI/GSI anchor biosynthesis","type":"broad"},{"name":"GPI/GSI anchor biosynthetic process","type":"broad"},{"name":"GSI anchor anabolism","type":"exact"},{"name":"GSI anchor biosynthesis","type":"exact"},{"name":"GSI anchor formation","type":"exact"},{"name":"GSI anchor synthesis","type":"exact"}],"termid":"GO:0042082"}


id: PR:O74839
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msy1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MscS family protein C1183.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.11","synonyms":[{"name":"Spom972h-msy1","type":"exact"}],"termid":"PR:O74839"}


id: PBO:0072966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1B member 1, pseudogene","termid":"PBO:0072966"}


id: PBO:0028983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_acid_phosphatase_activity","termid":"PBO:0028983"}


id: PBO:0003513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein Dni2 (predicted)","termid":"PBO:0003513"}


id: PR:Q9URX9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pin2-interacting protein X1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23149:SF1","OMA:SCHPO02086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pxr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.05","secondary_identifiers":["UniProtKB:Q9URX9"],"synonyms":[{"name":"PinX1-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PINX1","type":"exact"}],"termid":"PR:Q9URX9"}


id: PBO:0040724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL11 transcription factor B","termid":"PBO:0040724"}


id: MONDO:0009091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-acquired combined pituitary hormone deficiency-sensorineural hearing loss-spine abnormalities syndrome is a rare, genetic, non-acquired, combined pituitary hormone deficiency disorder characterized by panhypopituitarism (with or without ACTH deficiency) associated with spine abnormalities, including frequent rigid cervical spine and short neck with limited rotation, and variable degrees of sensorineural hearing loss. The anterior pituitary gland is usually abnormal (typically hypoplastic) and rarely a mild developmental delay or intellectual disability may be associated.","definition_xrefs":["Orphanet:231720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"non-acquired combined pituitary hormone deficiency with spine abnormalities","secondary_identifiers":["GARD:10603","UMLS:C3489787","MESH:C536710","OMIM:221750","MEDGEN:483740"],"synonyms":[{"name":"CPHD3","type":"related"},{"name":"Deafness, sensorineural with pituitary dwarfism","type":"related"},{"name":"Pituitary hormone deficiency, combined with rigid cervical spine","type":"related"},{"name":"Winkelmann-Bethge-Pfeiffer syndrome","type":"related"},{"name":"deafness, sensorineural, with pituitary dwarfism","type":"related"},{"name":"non-acquired combined pituitary hormone deficiency with spine abnormalities","type":"exact"},{"name":"non-acquired combined pituitary hormone deficiency-deafness-rigid cervical spine syndrome","type":"exact"},{"name":"non-acquired combined pituitary hormone deficiency-sensorineural hearing loss-spine abnormalities syndrome","type":"related"},{"name":"pituitary hormone deficiency, combined, 3","type":"related"},{"name":"pituitary hormone deficiency, combined, type 3","type":"exact"},{"name":"pituitary hormone deficiency, combined, with rigid cervical spine","type":"related"}],"termid":"MONDO:0009091","xrefs":{"Monarch":{"xref_id":"0009091"}}}


id: PBO:0080061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP30 antisense RNA 1","termid":"PBO:0080061"}


id: GO:0070213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ADP-ribosylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein auto-ADP-ribosylation","synonyms":[{"name":"protein amino acid auto-ADP-ribosylation","type":"exact"}],"termid":"GO:0070213"}


id: GO:0140614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dihydroxy naphthalene (DHN)-melanin.","definition_xrefs":["PMID:23998343","PMID:12788746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"melanin biosynthetic process","termid":"GO:0042438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"1,8-dihydroxynaphthalene-melanin biosynthetic process","synonyms":[{"name":"DHN-melanin biosynthesis","type":"exact"}],"termid":"GO:0140614"}


id: MONDO:0018468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Proton-pump inhibitor-responsive esophageal eosinophilia (PPI-REE) is a rare, gastroenterologic disease characterized by typical clinical, endoscopic and histological features of eosinophilic oesophagitis (i.e. symptomatic oesophageal dysfunction associated with eosinophil-predominant mucose infiltrate) which completely remits upon proton pump inhibitor therapy.","definition_xrefs":["Orphanet:411696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eosinophilic gastrointestinal disease","termid":"MONDO:0018438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"proton-pump inhibitor-responsive esophageal eosinophilia","secondary_identifiers":["GARD:21735","MEDGEN:1669432","UMLS:C4749332"],"synonyms":[{"name":"PPI-REE","type":"exact"},{"name":"PPI-responsive esophageal eosinophilia","type":"exact"},{"name":"PPIRee","type":"exact"}],"termid":"MONDO:0018468","xrefs":{"Monarch":{"xref_id":"0018468"}}}


id: PBO:0041854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 2","termid":"PBO:0041854"}


id: PBO:0039731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C2","termid":"PBO:0039731"}


id: PBO:0051946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPK1 pseudogene 1","termid":"PBO:0051946"}


id: PBO:0017086
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously incorrectly annotated as the ortholog Sae2p","termid":"PBO:0017086"}


id: PBO:0046474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELKS/RAB6-interacting/CAST family member 2","termid":"PBO:0046474"}


id: PBO:0087727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p); this complex forms a channel for passage of secretory proteins through the endoplasmic reticulum membrane, and of the Ssh1p complex (Ssh1p-Sbh2p-Sss1p); interacts with Ost4p and Wbp1p","termid":"PBO:0087727"}


id: GO:0015016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + alpha-D-glucosaminyl-[heparan sulfate](n) = adenosine 3',5'-bisphosphate + 2 H+ + N-sulfo-alpha-D-glucosaminyl-[heparan sulfate](n).","definition_xrefs":["EC:2.8.2.8","RHEA:21980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"heparan sulfate N-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2022860","GO:0051910","GO:0015022","MetaCyc:HEPARITIN-SULFOTRANSFERASE-RXN","GO:0004393"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:N-desulfoheparin N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:[heparan sulfate]-glucosamine N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:heparitin N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate:N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"N-HSST activity","type":"related"},{"name":"N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"N-heparan sulfate sulfotransferase activity","type":"related"},{"name":"PAPS:DSH sulfotransferase activity","type":"related"},{"name":"PAPS:N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"[heparan sulfate]-glucosamine N-sulfotransferase activity","type":"exact"},{"name":"[heparan sulphate]-glucosamine N-sulphotransferase activity","type":"exact"},{"name":"desulfoheparin sulfotransferase activity","type":"exact"},{"name":"glucosaminyl N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparan sulfate 2-N-sulfotransferase activity","type":"related"},{"name":"heparan sulfate N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparin N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparin N-deacetylase/N-sulphotransferase activity","type":"related"},{"name":"heparin N-sulfotransferase activity","type":"related"},{"name":"heparin-glucosamine N-sulfotransferase activity","type":"exact"},{"name":"heparitin N-sulfotransferase activity","type":"exact"},{"name":"heparitin N-sulphotransferase activity","type":"exact"},{"name":"heparitin sulfotransferase activity","type":"exact"}],"termid":"GO:0015016"}


id: MONDO:0008543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot and glaucoma","secondary_identifiers":["MEDGEN:396086","MESH:C536501","OMIM:187501","UMLS:C1861234"],"synonyms":[{"name":"familial tetralogy of fallot and glaucoma","type":"related"},{"name":"tetralogy of fallot and glaucoma","type":"exact"}],"termid":"MONDO:0008543","xrefs":{"Monarch":{"xref_id":"0008543"}}}


id: PBO:0057700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1288","termid":"PBO:0057700"}


id: GO:0045709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of salivary gland determination in an adult organism.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of salivary gland boundary specification","termid":"GO:0045705"},{"relation_name":"is_a","term_name":"regulation of adult salivary gland boundary specification","termid":"GO:0045707"},{"relation_name":"negatively_regulates","term_name":"adult salivary gland boundary specification","termid":"GO:0007434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adult salivary gland boundary specification","synonyms":[{"name":"down regulation of adult salivary gland determination","type":"exact"},{"name":"down-regulation of adult salivary gland determination","type":"exact"},{"name":"downregulation of adult salivary gland determination","type":"exact"},{"name":"inhibition of adult salivary gland determination","type":"narrow"},{"name":"negative regulation of adult salivary gland determination","type":"exact"}],"termid":"GO:0045709"}


id: PBO:0064776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase 1 pseudogene 1","termid":"PBO:0064776"}


id: MONDO:0100032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial temporal lobe epilepsy syndrome (obsolete MONDO:0100032)","termid":"MONDO:0100032","xrefs":{"Monarch":{"xref_id":"0100032"}}}


id: PBO:0024801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in","termid":"PBO:0024801"}


id: GO:0050996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"positively_regulates","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of lipid catabolic process","synonyms":[{"name":"activation of lipid catabolic process","type":"narrow"},{"name":"positive regulation of lipid breakdown","type":"exact"},{"name":"positive regulation of lipid catabolism","type":"exact"},{"name":"positive regulation of lipid degradation","type":"exact"},{"name":"stimulation of lipid catabolic process","type":"narrow"},{"name":"up regulation of lipid catabolic process","type":"exact"},{"name":"up-regulation of lipid catabolic process","type":"exact"},{"name":"upregulation of lipid catabolic process","type":"exact"}],"termid":"GO:0050996"}


id: PBO:0041163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG1 divergent transcript","termid":"PBO:0041163"}


id: GO:1903983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases the length of a microvillus.","definition_xrefs":["PMID:22114352","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"regulation of microvillus length","termid":"GO:0032532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microvillus length","synonyms":[{"name":"activation of regulation of microvillus length","type":"narrow"},{"name":"up regulation of regulation of microvillus length","type":"exact"},{"name":"up-regulation of regulation of microvillus length","type":"exact"},{"name":"upregulation of regulation of microvillus length","type":"exact"}],"termid":"GO:1903983"}


id: PomGeneEx:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present at a higher level under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased","termid":"PomGeneEx:0000002"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level increased","synonyms":[{"name":"increased protein level","type":"exact"},{"name":"protein expression increased","type":"exact"}],"termid":"PomGeneEx:0000018"}


id: MONDO:0020627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epileptic encephalopathy, infantile or early childhood (obsolete MONDO:0020627)","secondary_identifiers":["OMIMPS:617711"],"termid":"MONDO:0020627","xrefs":{"Monarch":{"xref_id":"0020627"}}}


id: PBO:0004280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec22 (predicted)","termid":"PBO:0004280"}


id: PBO:0056247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane anchored junction protein","termid":"PBO:0056247"}


id: PBO:0039607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine nucleotide translocase lysine methyltransferase","termid":"PBO:0039607"}


id: GO:1901581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of telomeric RNA transcription from RNA pol II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of telomeric RNA transcription from RNA pol II promoter (obsolete GO:1901581)","synonyms":[{"name":"down regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"down regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"down-regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"down-regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"downregulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"downregulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"inhibition of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"inhibition of telomeric RNA transcription from RNA pol II promoter","type":"narrow"},{"name":"negative regulation of telomeric RNA transcription from Pol II promoter","type":"exact"}],"termid":"GO:1901581"}


id: GO:0060363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which any suture between cranial bones is generated and organized.","definition_xrefs":["GOC:dph","GOC:pr","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial suture morphogenesis","termid":"GO:0097094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial suture morphogenesis","termid":"GO:0060363"}


id: GO:0004764
data:
  {"annotated_genes":["SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60331],"is_not":false,"summary":null,"term":"GO:0004764"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate + NADP+ = 3-dehydroshikimate + NADPH + H+.","definition_xrefs":["EC:1.1.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00337":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"shikimate 3-dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:SHIKIMATE-5-DEHYDROGENASE-RXN","RHEA:17737","KEGG_REACTION:R02413"],"synonyms":[{"name":"5-dehydroshikimate reductase activity","type":"related"},{"name":"5-dehydroshikimic reductase activity","type":"related"},{"name":"DHS reductase activity","type":"broad"},{"name":"dehydroshikimic reductase activity","type":"broad"},{"name":"shikimate oxidoreductase activity","type":"broad"},{"name":"shikimate:NADP(+) 5-oxidoreductase activity","type":"related"},{"name":"shikimate:NADP(+) oxidoreductase activity","type":"broad"}],"termid":"GO:0004764","terms_by_termid":{"GO:0004764":null}}


id: MONDO:0009154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypothyroidism, congenital, nongoitrous in which the cause of the disease is a mutation in the NKX2-5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism, congenital, nongoitrous","termid":"MONDO:0000045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothyroidism, congenital, nongoitrous, 5","secondary_identifiers":["MESH:C567123","MEDGEN:388687","OMIM:225250","DOID:0070125","UMLS:C2673630","GARD:15165"],"synonyms":[{"name":"CHNG5","type":"exact"},{"name":"NKX2-5 hypothyroidism, congenital, nongoitrous","type":"exact"},{"name":"congenital nongoitrous hypothyroidism 5","type":"related"},{"name":"hypothyroidism, congenital nongoitrous, 5","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous caused by mutation in NKX2-5","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, 5","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, type 5","type":"exact"}],"termid":"MONDO:0009154","xrefs":{"Monarch":{"xref_id":"0009154"}}}


id: PBO:0075740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP54 antisense RNA 1","termid":"PBO:0075740"}


id: PBO:0076012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1 pseudogene 3","termid":"PBO:0076012"}


id: PR:O94258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exportin-T that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03793","PANTHER:PTHR15952:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin-T (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.09c","secondary_identifiers":["UniProtKB:O94258"],"synonyms":[{"name":"Spom972h-XPOT","type":"exact"},{"name":"exportin(tRNA) (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA exportin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94258"}


id: PR:Q9P7J1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swt1 gene.","definition_xrefs":["UniProtKB:Q9P7J1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional protein swt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.15","synonyms":[{"name":"Spom972h-swt1","type":"exact"}],"termid":"PR:Q9P7J1"}


id: PBO:0015235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate reductase Osm1 (predicted)","termid":"PBO:0015235"}


id: PBO:0049740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit delta","termid":"PBO:0049740"}


id: PBO:0082819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NADPH oxidoreductase containing flavin mononucleotide (FMN); homologous to Oye2p with different ligand binding and catalytic properties; has potential roles in oxidative stress response and programmed cell death","termid":"PBO:0082819"}


id: GO:0015597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["TC:3.A.1.3.1","EC:3.6.3.21"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine/arginine/lysine/ornithine porter activity (obsolete GO:0015597)","synonyms":[{"name":"histidine/arginine/lysine/ornithine porter activity","type":"exact"}],"termid":"GO:0015597"}


id: PATO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000906 f1 sterile (obsolete PATO:0000906)","synonyms":[{"name":"F1 infertile","type":"related"}],"termid":"PATO:0000906"}


id: RO:0003000
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"produces","termid":"RO:0003000"}


id: PBO:0053937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1237","termid":"PBO:0053937"}


id: BFO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a core relation that holds between a part and its whole","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"overlaps","termid":"_global:overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"part_of","secondary_identifiers":["BFO:0000050","OBO_REL:part_of"],"synonyms":[{"name":"part of","type":"exact"}],"termid":"BFO:0000050"}


id: MONDO:0018317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"growth retardation-mild developmental delay-chronic hepatitis syndrome","secondary_identifiers":["MEDGEN:1654119","GARD:21621","Orphanet:391366","UMLS:C4751595"],"termid":"MONDO:0018317","xrefs":{"Monarch":{"xref_id":"0018317"}}}


id: PBO:0062839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 5","termid":"PBO:0062839"}


id: PATO:0000949
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being abnormally flattened or coalesced.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciated","termid":"PATO:0000949"}


id: PBO:0045331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 8","termid":"PBO:0045331"}


id: PBO:0038980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylserine hydrolase","termid":"PBO:0038980"}


id: GO:0018332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient adenylylation of threonine to form N6-(phospho-5'-adenosine)-L-threonine, found in the active site of bovine phosphodiesterase I.","definition_xrefs":["RESID:AA0267"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-(phospho-5'-adenosine)-L-threonine (obsolete GO:0018332)","termid":"GO:0018332"}


id: PR:Q9P3E8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC750.02c/SPBPB2B2.16c.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3E8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C750.02c/PB2B2.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.16c","synonyms":[{"name":"Spom972h-SPBPB2B2.16c","type":"exact"}],"termid":"PR:Q9P3E8"}


id: PBO:0049625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 28","termid":"PBO:0049625"}


id: GO:0072388
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"flavin-containing compound biosynthetic process","termid":"GO:0042727"},{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"flavin adenine dinucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"FAD or FADH2 biosynthetic process","type":"exact"},{"name":"flavin adenine dinucleotide anabolism","type":"exact"},{"name":"flavin adenine dinucleotide biosynthesis","type":"exact"},{"name":"flavin adenine dinucleotide formation","type":"exact"},{"name":"flavin adenine dinucleotide synthesis","type":"exact"}],"termid":"GO:0072388","terms_by_termid":{"GO:0006747":null}}


id: GO:0051463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of cortisol from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cortisol secretion","termid":"GO:0051462"},{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid secretion","termid":"GO:2000850"},{"relation_name":"negatively_regulates","term_name":"cortisol secretion","termid":"GO:0043400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of cortisol secretion","synonyms":[{"name":"down regulation of cortisol secretion","type":"exact"},{"name":"down-regulation of cortisol secretion","type":"exact"},{"name":"downregulation of cortisol secretion","type":"exact"},{"name":"inhibition of cortisol secretion","type":"narrow"}],"termid":"GO:0051463"}


id: PBO:0068746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 1","termid":"PBO:0068746"}


id: PBO:0091973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase Gut2","termid":"PBO:0091973"}


id: GO:2000015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of determination of dorsal identity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"determination of dorsal identity","termid":"GO:0048263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of determination of dorsal identity","synonyms":[{"name":"regulation of determination of adaxial identity","type":"related"}],"termid":"GO:2000015"}


id: FYPO:0005283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable when cells the population are subject to inositol starvation.","definition_xrefs":["PMID:19606215","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased viability upon inositol starvation","synonyms":[{"name":"increased cell population viability upon inositol starvation","type":"exact"},{"name":"increased viability during inositol starvation","type":"exact"},{"name":"increased viability upon inositol depletion","type":"exact"},{"name":"increased viability upon inositol deprivation","type":"exact"},{"name":"increased viability upon inositol limitation","type":"exact"}],"termid":"FYPO:0005283"}


id: PBO:0067442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 564, pseudogene","termid":"PBO:0067442"}


id: GO:0017002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with activin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Activin is one of two gonadal glycoproteins related to transforming growth factor beta.","definition_xrefs":["ISBN:0198506732","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0004672","GO:0016301","GO:0003824","GO:0140096","GO:0003674","GO:0038023","GO:0016740"],"is_obsolete":false,"name":"activin receptor activity","synonyms":[{"name":"activin-activated receptor activity","type":"exact"}],"termid":"GO:0017002"}


id: PR:O59682
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine palmitoyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13693:SF2","OMA:SCHPO03120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.02c","secondary_identifiers":["UniProtKB:O59682"],"synonyms":[{"name":"SPT 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPT1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPTLC1","type":"exact"},{"name":"long chain base biosynthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59682"}


id: SO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Fifth intronic position after the intron exon boundary, close to the 5' edge of the intron.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"},{"relation_name":"part_of","term_name":"extended_cis_splice_site","termid":"SO:0001993"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_base_5","synonyms":[{"name":"intron base 5","type":"exact"}],"termid":"SO:0001994"}


id: PBO:0076775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor and KH domain containing","termid":"PBO:0076775"}


id: FYPO:0007941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is normal (i.e. indistinguishable from wild type) during  the meiotic cell cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"},{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin organization during meiotic cell cycle","synonyms":[{"name":"normal chromatin organisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007941"}


id: MONDO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the anal canal","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"},{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anal canal cancer","secondary_identifiers":["SCTID:363352004","UMLS:C0153445","ICD9:154.2","DOID:0050688","MEDGEN:509296"],"synonyms":[{"name":"anal canal cancer","type":"exact"},{"name":"cancer of anal canal","type":"exact"},{"name":"malignant anal canal neoplasm","type":"exact"},{"name":"malignant neoplasm of anal canal","type":"exact"}],"termid":"MONDO:0000405","xrefs":{"Monarch":{"xref_id":"0000405"}}}


id: MONDO:0016810
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"}]},"cv_name":"mondo","definition":"Autosomal recessive form of progressive external ophthalmoplegia.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia","termid":"MONDO:0005181"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004069","MONDO:0002320","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive progressive external ophthalmoplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1191","ICD10CM:H49.4","MESH:C564926","MEDGEN:340509","Orphanet:254886","UMLS:C1850303"],"synonyms":[{"name":"arPEO","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive","type":"exact"}],"termid":"MONDO:0016810","terms_by_termid":{"MONDO:0009783":null},"xrefs":{"Monarch":{"xref_id":"0016810"}}}


id: GO:0103002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-hydroxypalmitate + NADP = H+ + 16-oxo-palmitate + NADPH.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"16-hydroxypalmitate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-9802"],"termid":"GO:0103002"}


id: GO:0046479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"},{"relation_name":"is_a","term_name":"glycolipid catabolic process","termid":"GO:0019377"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycosphingolipid catabolic process","secondary_identifiers":["Reactome:R-HSA-9840310"],"synonyms":[{"name":"glycosphingolipid breakdown","type":"exact"},{"name":"glycosphingolipid catabolism","type":"exact"},{"name":"glycosphingolipid degradation","type":"exact"}],"termid":"GO:0046479"}


id: MONDO:1012182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial myopathy, non-human animal","termid":"MONDO:1011791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial myopathy, dog","secondary_identifiers":["OMIA:000695-9615"],"termid":"MONDO:1012182","xrefs":{"Monarch":{"xref_id":"1012182"}}}


id: GO:0051477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a mannosylglycerate from one side of a membrane to the other.","definition_xrefs":["PMID:15034926","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"mannosylglycerate transmembrane transporter activity","termid":"GO:0051477"}


id: PBO:0047231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member C","termid":"PBO:0047231"}


id: PBO:0066818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 117","termid":"PBO:0066818"}


id: PBO:0077191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia homeobox 2","termid":"PBO:0077191"}


id: GO:0015342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (Zn2+ or Fe2+)(out) = (Zn2+ or Fe2+)(in), probably powered by proton motive force.","definition_xrefs":["TC:2.A.5.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete zinc, iron permease activity (obsolete GO:0015342)","synonyms":[{"name":"zinc, iron permease activity","type":"exact"}],"termid":"GO:0015342"}


id: MONDO:0030736
data:
  {"annotated_genes":["SJAG_03051"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88766],"is_not":false,"summary":null,"term":"MONDO:0030736"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03051":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619834","UMLS:C5676966","MEDGEN:1801078"],"synonyms":[{"name":"ODG10","type":"exact"},{"name":"ovarian dysgenesis 10","type":"exact"}],"termid":"MONDO:0030736","terms_by_termid":{"MONDO:0030736":null},"xrefs":{"Monarch":{"xref_id":"0030736"}}}


id: MONDO:0022977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic hernia exomphalos corpus callosum agenesis","termid":"MONDO:0022977","xrefs":{"Monarch":{"xref_id":"0022977"}}}


id: PBO:0054090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1443","termid":"PBO:0054090"}


id: GO:0008990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N2-methylguanine.","definition_xrefs":["PMID:17389639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0140098","GO:0016741"],"is_obsolete":false,"name":"rRNA (guanine-N2-)-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07234"],"synonyms":[{"name":"S-adenosyl-L-methionine:rRNA (guanine-2-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:rRNA (guanine-N2-)-methyltransferase activity","type":"related"},{"name":"ribosomal ribonucleate guanine-2-methyltransferase activity","type":"related"}],"termid":"GO:0008990"}


id: PBO:0034115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_habitat","termid":"PBO:0034115"}


id: PBO:0047801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box J1","termid":"PBO:0047801"}


id: PBO:0054061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1405","termid":"PBO:0054061"}


id: PBO:0088442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetohydroxyacid reductoisomerase","termid":"PBO:0088442"}


id: GO:0006174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into dADP, deoxyadenosine diphosphate, to produce dATP.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete dADP phosphorylation (obsolete GO:0006174)","termid":"GO:0006174"}


id: PBO:0071314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 37","termid":"PBO:0071314"}


id: MONDO:0001036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An accumulation of pus in the anterior chamber of the eye.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious anterior uveitis","termid":"MONDO:0017210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hypopyon","secondary_identifiers":["icd11.foundation:803985395","SCTID:87807004","DOID:10443","NCIT:C50593","UMLS:C0020641","MEDGEN:43802","ICD9:364.05"],"termid":"MONDO:0001036","xrefs":{"Monarch":{"xref_id":"0001036"}}}


id: PBO:0109939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, splicosomal Prp16","termid":"PBO:0109939"}


id: GO:0050041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate = acetaldehyde + formate.","definition_xrefs":["RHEA:17909","EC:4.1.2.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactate aldolase activity","secondary_identifiers":["KEGG_REACTION:R00753","MetaCyc:LACTATE-ALDOLASE-RXN"],"synonyms":[{"name":"(S)-lactate acetaldehyde-lyase (formate-forming)","type":"related"},{"name":"(S)-lactate acetaldehyde-lyase activity","type":"related"},{"name":"lactate synthase activity","type":"related"}],"termid":"GO:0050041"}


id: PBO:0080641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 88","termid":"PBO:0080641"}


id: PBO:0088020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tyrosyl-DNA phosphodiesterase I; hydrolyzes 3' and 5'-phosphotyrosyl bonds; involved in the repair of DNA lesions created by topo I and topo II; mutations in the human homolog, TDP1, result in the a neurodegenerative disease, spinocerebellar ataxia with axonal neuropathy (SCAN1); yeast cells and human rhabdomyosarcoma lines that overexpress TDP1 both exhibit elevated dosage chromosomal instability (dCIN)","termid":"PBO:0088020"}


id: PBO:0077758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20L divergent transcript","termid":"PBO:0077758"}


id: MONDO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hematologic malignancy that is resistant to treatment.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic and lymphoid cell neoplasm","termid":"MONDO:0044881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"refractory hematologic cancer","secondary_identifiers":["NCIT:C27357","MEDGEN:233400","DOID:712","UMLS:C1335724"],"synonyms":[{"name":"refractory hematologic cancer","type":"exact"},{"name":"refractory hematologic malignancy","type":"exact"}],"termid":"MONDO:0004111","xrefs":{"Monarch":{"xref_id":"0004111"}}}


id: PBO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional enzyme","termid":"PBO:0003273"}


id: MONDO:0016320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary thrombophilia (obsolete MONDO:0016320)","secondary_identifiers":["Orphanet:217454"],"termid":"MONDO:0016320","xrefs":{"Monarch":{"xref_id":"0016320"}}}


id: PBO:0081148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP69 zinc finger protein B","termid":"PBO:0081148"}


id: PBO:0040886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 8b","termid":"PBO:0040886"}


id: GO:0044284
data:
  {"annotated_genes":["SJAG_05241","SJAG_03282","SJAG_02028","SJAG_02501","SJAG_02002"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76818,91317,103598,109250,111971],"is_not":false,"summary":null,"term":"GO:0044284"}]},"cv_name":"cellular_component","definition":"A tubular structure of relatively uniform size that connects a mitochondrial crista to the mitochondrial inner boundary membrane.","definition_xrefs":["PMID:22009199","PMID:21987634","GOC:mcc","PMID:21944719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02002":null,"SJAG_02028":null,"SJAG_02501":null,"SJAG_03282":null,"SJAG_05241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"mitochondrial crista junction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"crista junction","type":"exact"},{"name":"cristae junction","type":"exact"}],"termid":"GO:0044284","terms_by_termid":{"GO:0044284":null}}


id: PBO:0071573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 2","termid":"PBO:0071573"}


id: SO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genome is the sum of genetic material within a cell or virion.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"has_part","term_name":"replicon","termid":"SO:0001235"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genome","secondary_identifiers":["http://en.wikipedia.org/wiki/Genome"],"termid":"SO:0001026"}


id: FYPO:0001314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, and structure of the cell cortex are normal when the cell is in the vegetative growth phase of the life cycle. The cell cortex is the region of a cell that lies just beneath the plasma membrane.","definition_xrefs":["GO:0005938","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cortex morphology","termid":"FYPO:0001231"},{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cell cortex morphology during vegetative growth","synonyms":[{"name":"normal cell cortex morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001314"}


id: GO:0042019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-23.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-23 binding","synonyms":[{"name":"IL-23 binding","type":"exact"}],"termid":"GO:0042019"}


id: GO:0044799
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric protein complex with iron-sulfur and molybdenum cofactors that functions as a terminal reductase in electron transport pathways that operate during anaerobic nitrate respiration. In E. coli electrons are passed from the FdnGHI complex to the NarGHI complex via menoquinone and menaquinol. Within NarGHI, electrons are passed from the two heme molecules in the NarI subunit down a Fe-S cluster chain in the NarH and NarG subunits to the Molybdenum cofactor, Mo-bisMGD, in the NarG subunit.","definition_xrefs":["PMID:17964535","GOC:bhm","PMID:12910261","PMID:11289299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase complex","termid":"GO:0009325"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"NarGHI complex","synonyms":[{"name":"cytoplasmic membrane-bound quinol-nitrate oxidoreductase","type":"exact"},{"name":"nitrate reductase A","type":"exact"}],"termid":"GO:0044799"}


id: PBO:0088802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup146","termid":"PBO:0088802"}


id: FYPO:0005847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of H3-K9 specific histone methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methyltransferase activity","termid":"FYPO:0004784"},{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity (H3-K9 specific) activity","termid":"FYPO:0005846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000641","FYPO:0005447","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone methyltransferase activity (H3-K9 specific) activity","synonyms":[{"name":"decreased H3-K9 specific histone methyltransferase activity","type":"exact"},{"name":"reduced histone methyltransferase activity (H3-K9 specific) activity","type":"exact"}],"termid":"FYPO:0005847"}


id: MONDO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central neurocytoma (obsolete MONDO:0001900)","termid":"MONDO:0001900","xrefs":{"Monarch":{"xref_id":"0001900"}}}


id: PBO:0090545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S21","termid":"PBO:0090545"}


id: GO:0043571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in sustaining CRISPR repeat clusters, including capture of new spacer elements, expansion or contraction of clusters, propagation of the leader sequence and repeat clusters within a genome, transfer of repeat clusters and CRISPR-associated (cas) genes to new genomes, transcription of the CRISPR repeat arrays into RNA and processing, and interaction of CRISPR/cas loci with the host genome. CRISPR (clustered regularly interspaced short palindromic repeat) elements are a family of sequence elements containing multiple direct repeats of 24-48 bp with weak dyad symmetry which are separated by regularly sized nonrepetitive spacer sequences.","definition_xrefs":["PMID:16292354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"maintenance of CRISPR repeat elements","synonyms":[{"name":"CRISPR element metabolic process","type":"related"},{"name":"CRISPR element metabolism","type":"related"},{"name":"maintenance of clustered regularly interspaced short palindromic repeat elements","type":"exact"}],"termid":"GO:0043571"}


id: SO:0001631
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream_gene_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:upstream","type":"related"},{"name":"Jannovar:upstream_gene_variant","type":"exact"},{"name":"VEP:upstream_gene_variant","type":"exact"},{"name":"snpEff:UPSTREAM","type":"exact"},{"name":"upstream gene variant","type":"exact"}],"termid":"SO:0001631"}


id: PBO:0086682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by homology","termid":"PBO:0086682"}


id: GO:1901726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone deacetylase activity.","definition_xrefs":["PMID:20497126","GOC:BHF","GOC:TermGenie","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylase activity (obsolete GO:1901726)","synonyms":[{"name":"down regulation of histone deacetylase activity","type":"exact"},{"name":"down-regulation of histone deacetylase activity","type":"exact"},{"name":"downregulation of histone deacetylase activity","type":"exact"},{"name":"inhibition of histone deacetylase activity","type":"narrow"}],"termid":"GO:1901726"}


id: GO:0003983
data:
  {"annotated_genes":["SJAG_01089","SJAG_02178"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74306,81969],"is_not":false,"summary":null,"term":"GO:0003983"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + UTP = diphosphate + UDP-D-glucose.","definition_xrefs":["EC:2.7.7.9","RHEA:19889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","termid":"GO:0051748"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UTP:glucose-1-phosphate uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00289","MetaCyc:GLUC1PURIDYLTRANS-RXN","Reactome:R-HSA-70286"],"synonyms":[{"name":"UDP glucose pyrophosphorylase activity","type":"related"},{"name":"UDP-glucose diphosphorylase activity","type":"related"},{"name":"UDP-glucose pyrophosphorylase activity","type":"related"},{"name":"UDPG phosphorylase activity","type":"related"},{"name":"UDPG pyrophosphorylase activity","type":"related"},{"name":"UTP-glucose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:alpha-D-glucose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"glucose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"uridine 5'-diphosphoglucose pyrophosphorylase activity","type":"related"},{"name":"uridine diphosphate-D-glucose pyrophosphorylase activity","type":"related"},{"name":"uridine diphosphoglucose pyrophosphorylase activity","type":"related"},{"name":"uridine-diphosphate glucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0003983","terms_by_termid":{"GO:0003983":null}}


id: GO:0033264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of limited hydrolysis of proteins of the neuroexocytosis apparatus, synaptobrevins, SNAP25 or syntaxin. No detected action on small molecule substrates.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete bontoxilysin activity (obsolete GO:0033264)","synonyms":[{"name":"BoNT","type":"related"},{"name":"bontoxilysin activity","type":"exact"},{"name":"botulinum neurotoxin activity","type":"exact"}],"termid":"GO:0033264"}


id: PBO:0003853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex cullin family subunit Apc2","termid":"PBO:0003853"}


id: PBHQ:004
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_has_qualifier_range","direct_ancestors":[{"relation_name":"is_a","term_name":"has_qualifier_range","termid":"PBHQ:001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to","termid":"PBHQ:004"}


id: GO:0019440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-tryptophan into other compounds, including indole-3-acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"indoleacetic acid metabolic process","termid":"GO:0009683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-tryptophan catabolic process to indole-3-acetate","secondary_identifiers":["MetaCyc:TRPIAACAT-PWY"],"synonyms":[{"name":"tryptophan breakdown to indole-3-acetate","type":"exact"},{"name":"tryptophan catabolic process to IAA","type":"exact"},{"name":"tryptophan catabolic process to indole-3-acetate","type":"exact"},{"name":"tryptophan catabolic process to indoleacetic acid","type":"exact"},{"name":"tryptophan catabolism to indoleacetic acid","type":"exact"},{"name":"tryptophan degradation to indole-3-acetate","type":"exact"}],"termid":"GO:0019440"}


id: PBO:0041686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin related polypeptide alpha","termid":"PBO:0041686"}


id: PBO:0028558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle","termid":"PBO:0028558"}


id: MONDO:0013823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the CEACAM16 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 4B","secondary_identifiers":["GARD:18136","OMIM:614614","DOID:0110574","MEDGEN:482927","UMLS:C3281297"],"synonyms":[{"name":"CEACAM16 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"DFNA4B","type":"narrow"},{"name":"autosomal dominant deafness 4B","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 4B","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in CEACAM16","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 4B","type":"narrow"},{"name":"deafness, autosomal dominant 4B","type":"narrow"},{"name":"deafness, autosomal dominant 4b","type":"narrow"},{"name":"deafness, autosomal dominant type 4B","type":"narrow"}],"termid":"MONDO:0013823","xrefs":{"Monarch":{"xref_id":"0013823"}}}


id: GO:0007369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.","definition_xrefs":["ISBN:9780878933846","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation","secondary_identifiers":["Wikipedia:Gastrulation","Reactome:R-HSA-9758941"],"termid":"GO:0007369"}


id: PBO:0076621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBCC domain containing 1","termid":"PBO:0076621"}


id: GO:0010786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of clathrin and adaptor proteins to Golgi membranes during the formation of transport vesicles that will move from the trans-Golgi to the endosome, forming a vesicle coat.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coating of Golgi vesicle","termid":"GO:0048202"},{"relation_name":"part_of","term_name":"vesicle targeting, trans-Golgi to endosome","termid":"GO:0048203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0016192","GO:0061024","GO:0044085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"clathrin coating of Golgi vesicle, trans-Golgi to endosome targeting","termid":"GO:0010786"}


id: PBO:0039062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylglycerol kinase","termid":"PBO:0039062"}


id: GO:0044701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response to a stimulus that involves only one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete response to stimulus by single organism (obsolete GO:0044701)","synonyms":[{"name":"response to stimulus by single organism","type":"exact"}],"termid":"GO:0044701"}


id: PBO:0039952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C","termid":"PBO:0039952"}


id: MOD:01853
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysinoalanine either by forming a cross-link with peptidyl-cysteine or peptidyl-serine, or by condensation with free serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinoalanine","termid":"MOD:01853"}


id: GO:0098552
data:
  {"annotated_genes":["SJAG_02260","SJAG_04018","SJAG_01738","SJAG_02605","SJAG_04850","SJAG_04685","SJAG_00096","SJAG_05268","SJAG_04483","SJAG_02102","SJAG_00754","SJAG_04077","SJAG_01940","SJAG_04122","SJAG_00368","SJAG_04952","SJAG_02989","SJAG_MIT09","SJAG_00334","SJAG_MIT37","SJAG_03764","SJAG_00797","SJAG_00438","SJAG_01835","SJAG_02564","SJAG_03656","SJAG_05272","SJAG_02444","SJAG_01806","SJAG_07003","SJAG_MIT15","SJAG_02173","SJAG_04026","SJAG_02093","SJAG_00747","SJAG_00948","SJAG_05207","SJAG_03596","SJAG_01260","SJAG_04238","SJAG_03464","SJAG_01312","SJAG_04851","SJAG_00437","SJAG_03204","SJAG_03282","SJAG_03925","SJAG_00077","SJAG_00310","SJAG_04789","SJAG_00218","SJAG_01950","SJAG_00985","SJAG_00415","SJAG_04732","SJAG_00605","SJAG_01134","SJAG_02163","SJAG_02587","SJAG_03345","SJAG_04209","SJAG_01290","SJAG_00109","SJAG_00254","SJAG_00852","SJAG_01242","SJAG_03311","SJAG_02435","SJAG_03081","SJAG_00340","SJAG_03640","SJAG_02916","SJAG_00836","SJAG_03328","SJAG_04666","SJAG_00784","SJAG_04875","SJAG_01249","SJAG_01178","SJAG_02105","SJAG_00554","SJAG_03114","SJAG_03056","SJAG_02233","SJAG_02598","SJAG_02196","SJAG_00915","SJAG_00133","SJAG_04821","SJAG_01307","SJAG_01029","SJAG_04583","SJAG_01086","SJAG_05204","SJAG_00542","SJAG_04363","SJAG_01774","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61190,63293],"is_not":false,"summary":null,"term":"GO:0098552"},{"annotations":[118721,77804,104195,99651,100551,112962,111798,107757,95741,100211,109951,116102,96938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[92401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[104402,101133,107720,103237,117752,108513,119668,91076,107851,102414,106375,106730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[91551,72443,81561,89690,80005,94250,77995,100853,112817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[108515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[120783,104144,91942,96697,97140,58658,104137,114998,115711,118253,95892,105902,116354,119330,119770,116733,104145,65187,120346,108484,96709,116454,96710,91745,96711,117585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009897"},{"annotations":[112493],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[105663,102342],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[82191,77062,108423,75965],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"},{"annotations":[92197,101664,77803,92959,101876,111240,106924,100261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098553"},{"annotations":[117826,121082,91316,121077,95710,104934,105578,103712,94692,98115,105552,106927,90949,109741,95658,95119,109833,91778,96701,110731,121071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099617"}]},"cv_name":"cellular_component","definition":"A cellular component consisting of one leaflet of a membrane bilayer and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane","termid":"GO:0016020"}],"gene_count":98,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00096":null,"SJAG_00109":null,"SJAG_00133":null,"SJAG_00218":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00334":null,"SJAG_00340":null,"SJAG_00368":null,"SJAG_00415":null,"SJAG_00437":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00554":null,"SJAG_00605":null,"SJAG_00747":null,"SJAG_00754":null,"SJAG_00784":null,"SJAG_00797":null,"SJAG_00836":null,"SJAG_00852":null,"SJAG_00915":null,"SJAG_00948":null,"SJAG_00985":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01134":null,"SJAG_01178":null,"SJAG_01242":null,"SJAG_01249":null,"SJAG_01260":null,"SJAG_01290":null,"SJAG_01307":null,"SJAG_01312":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_01806":null,"SJAG_01835":null,"SJAG_01940":null,"SJAG_01950":null,"SJAG_02093":null,"SJAG_02102":null,"SJAG_02105":null,"SJAG_02163":null,"SJAG_02173":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02260":null,"SJAG_02435":null,"SJAG_02444":null,"SJAG_02564":null,"SJAG_02587":null,"SJAG_02598":null,"SJAG_02605":null,"SJAG_02916":null,"SJAG_02989":null,"SJAG_03056":null,"SJAG_03081":null,"SJAG_03114":null,"SJAG_03204":null,"SJAG_03282":null,"SJAG_03311":null,"SJAG_03328":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_03640":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03925":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04122":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04363":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04583":null,"SJAG_04666":null,"SJAG_04685":null,"SJAG_04732":null,"SJAG_04789":null,"SJAG_04821":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04875":null,"SJAG_04952":null,"SJAG_05204":null,"SJAG_05207":null,"SJAG_05268":null,"SJAG_05272":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"side of membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0098552","terms_by_termid":{"GO:0005834":null,"GO:0009897":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098552":null,"GO:0098553":null,"GO:0098554":null,"GO:0099616":null,"GO:0099617":null,"GO:0106186":null}}


id: GO:0102391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + decanoate + CoA = AMP + diphosphate + decanoyl-CoA.","definition_xrefs":["GOC:pz","RHEA:33627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medium-chain fatty acid-CoA ligase activity","termid":"GO:0031956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"decanoate-CoA ligase activity","secondary_identifiers":["MetaCyc:RXN-13614"],"termid":"GO:0102391"}


id: PBO:0035698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytokinesis_checkpoint","termid":"PBO:0035698"}


id: PR:Q9Y7R4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone-lysine N-methyltransferase SETD1B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase, H3 lysine-4 specific (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.04c","secondary_identifiers":["UniProtKB:Q9Y7R4"],"synonyms":[{"name":"COMPASS component set1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SET domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC306.04c","type":"related"},{"name":"Set1C component set1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SETD1B","type":"exact"},{"name":"Spset1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"kmt2","type":"related"},{"name":"lysine N-methyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"set1 complex component set1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7R4"}


id: PBO:0085174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Omega class glutathione transferase; putative cytosolic localization","termid":"PBO:0085174"}


id: MONDO:0004251
data:
  {"annotated_genes":["SJAG_03920","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88620,88621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011719"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the small intestine. Representative examples of benign neoplasms include lipoma and leiomyoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal neoplasm","termid":"MONDO:0021118"},{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestine neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0345832","DOID:7505","MEDGEN:91055","NCIT:C4432","SCTID:126832004"],"synonyms":[{"name":"neoplasm of small bowel","type":"exact"},{"name":"neoplasm of small intestine","type":"exact"},{"name":"neoplasm of the small bowel","type":"exact"},{"name":"neoplasm of the small intestine","type":"exact"},{"name":"small bowel neoplasm","type":"exact"},{"name":"small bowel tumor","type":"exact"},{"name":"small bowel tumour","type":"exact"},{"name":"small intestinal neoplasm","type":"exact"},{"name":"small intestine neoplasm","type":"exact"},{"name":"small intestine neoplasm (disease)","type":"exact"},{"name":"small intestine tumor","type":"exact"},{"name":"small intestine tumour","type":"exact"},{"name":"tumor of small bowel","type":"exact"},{"name":"tumor of small intestine","type":"exact"},{"name":"tumor of the small bowel","type":"exact"},{"name":"tumor of the small intestine","type":"exact"},{"name":"tumour of small bowel","type":"exact"},{"name":"tumour of small intestine","type":"exact"},{"name":"tumour of the small bowel","type":"exact"},{"name":"tumour of the small intestine","type":"exact"}],"termid":"MONDO:0004251","terms_by_termid":{"MONDO:0011719":null},"xrefs":{"Monarch":{"xref_id":"0004251"}}}


id: GO:1905574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GM2.","definition_xrefs":["PMID:1454804","GOC:TermGenie","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"ganglioside GM2 binding","termid":"GO:1905574"}


id: PBO:0002778
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cryptic Loci Regulator","termid":"PBO:0002778"}


id: MONDO:0011215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteocraniostenosis is a lethal skeletal dysplasia characterized by a cloverleaf skull anomaly, facial dysmorphism, limb shortness, splenic hypo/aplasia and radiological anomalies including thin tubular bones with flared metaphyses and deficient calvarial mineralization.","definition_xrefs":["Orphanet:2763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteocraniostenosis","secondary_identifiers":["MESH:C537291","SCTID:722109008","UMLS:C1865639","OMIM:602361","GARD:3396","MEDGEN:356331","ICD10CM:Q78.0","icd11.foundation:539409723"],"synonyms":[{"name":"GCLEB","type":"related"},{"name":"Habrodysplasia","type":"related"},{"name":"Osteocraniosplenic syndrome","type":"exact"},{"name":"gracile bone dysplasia","type":"exact"},{"name":"osteocraniostenosis","type":"exact"},{"name":"skeletal dysplasia lethal with gracile bones","type":"related"},{"name":"skeletal dysplasia, lethal, with gracile bones","type":"related"}],"termid":"MONDO:0011215","xrefs":{"Monarch":{"xref_id":"0011215"}}}


id: PBO:0029473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_tapered_vegetative_cell","termid":"PBO:0029473"}


id: FYPO:0006266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size of the fungal-type vacuole is normal (i.e. indistinguishable from wild type)..","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vacuolar morphology during vegetative growth","termid":"FYPO:0004247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal vacuole size during vegetative growth","synonyms":[{"name":"normal vacuolar size during vegetative growth","type":"exact"},{"name":"normal vacuole size during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006266"}


id: FYPO:0002903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is viable and shaped in the form of a pear in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pear-shaped cell","termid":"FYPO:0000020"},{"relation_name":"is_a","term_name":"pear-shaped vegetative cell","termid":"FYPO:0001120"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"viable pear-shaped vegetative cell","synonyms":[{"name":"viable ice cream cone-shaped cell during vegetative growth","type":"exact"},{"name":"viable pear-shaped cell during vegetative growth","type":"exact"},{"name":"viable pear-shaped vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002903"}


id: PBO:0054551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1951","termid":"PBO:0054551"}


id: MONDO:0002927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm composed of spindle-shaped cells. This is a morphologic term which can be applied to a wide range of sarcomas.","definition_xrefs":["NCIT:C27005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"malignant spindle cell neoplasm","termid":"MONDO:0020663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spindle cell sarcoma","secondary_identifiers":["UMLS:C0205945","DOID:4235","ICDO:8801/3","MEDGEN:64477"],"synonyms":[{"name":"spindle cell sarcoma","type":"exact"}],"termid":"MONDO:0002927","xrefs":{"Monarch":{"xref_id":"0002927"}}}


id: PBO:0084120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme-binding protein; involved in regulation of cytochrome P450 protein Erg11p; damage response protein, related to mammalian membrane progesterone receptors; mutations lead to defects in telomeres, mitochondria, and sterol synthesis","termid":"PBO:0084120"}


id: PBO:0069394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 654, pseudogene","termid":"PBO:0069394"}


id: GO:0003790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete actin modulating activity (obsolete GO:0003790)","synonyms":[{"name":"actin modulating activity","type":"exact"}],"termid":"GO:0003790"}


id: PBO:0048429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT8 antisense upstream 1","termid":"PBO:0048429"}


id: GO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An RNA polymerase complex containing polypeptides encoded by the plastid genome. Plastid-encoded DNA-directed RNA polymerases resemble eubacterial multisubunit RNA polymerases, with a core composed of alpha, beta, and beta-prime subunits. Some forms contain multiple additional subunits. An additional sigma factor subunit is required for promoter recognition.","definition_xrefs":["GOC:pj","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase complex","termid":"GO:0000428"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"plastid-encoded plastid RNA polymerase complex","termid":"GO:0000427"}


id: GO:0032238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of adenosine, adenine riboside, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"adenosine transport","termid":"GO:0032238"}


id: PBO:0030507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_capsazepine","termid":"PBO:0030507"}


id: MONDO:0004748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the lip.","direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lip disorder","secondary_identifiers":["UMLS:C0023760","MEDGEN:44166","MESH:D008047","DOID:9297","NCIT:C26818","ICD9:528.5","SCTID:90678009"],"synonyms":[{"name":"disease of lip","type":"exact"},{"name":"disease of lips","type":"exact"},{"name":"disease or disorder of lip","type":"exact"},{"name":"disorder of lip","type":"exact"},{"name":"lip disease","type":"exact"},{"name":"lip disease or disorder","type":"exact"},{"name":"lip disorder","type":"exact"}],"termid":"MONDO:0004748","xrefs":{"Monarch":{"xref_id":"0004748"}}}


id: PBO:0059820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin","termid":"PBO:0059820"}


id: PBO:0031720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_genome_maintenance","termid":"PBO:0031720"}


id: MONDO:0019568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in which the cause of the disease is a mutation in the COL5A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, classic type","termid":"MONDO:0007522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic type, 2","secondary_identifiers":["Orphanet:90318","UMLS:C0268336","NCIT:C125697","MESH:C536195","DOID:0080726","OMIM:130010","MEDGEN:120628"],"synonyms":[{"name":"EDS II","type":"exact"},{"name":"EDS II, formerly","type":"related"},{"name":"EDSCL2","type":"exact"},{"name":"Ehlers Danlos syndrome, mild Classic type","type":"related"},{"name":"Ehlers Danlos syndrome, mild Classic type, formerly","type":"related"},{"name":"Ehlers Danlos syndrome, mitis type","type":"related"},{"name":"Ehlers Danlos syndrome, mitis type, formerly","type":"related"},{"name":"Ehlers-Danlos syndrome, classic type, 2","type":"exact"},{"name":"Ehlers-Danlos syndrome, type Ii","type":"related"},{"name":"Ehlers-Danlos syndrome, type Ii, formerly","type":"related"}],"termid":"MONDO:0019568","xrefs":{"Monarch":{"xref_id":"0019568"}}}


id: PBO:0050638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 3, pseudogene","termid":"PBO:0050638"}


id: PR:Q9HE04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho5 gene.","definition_xrefs":["UniProtKB:Q9HE04","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.11c","synonyms":[{"name":"Spom972h-rho5","type":"exact"}],"termid":"PR:Q9HE04"}


id: GO:0086007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}


id: PBO:0083382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps CUP1-1","termid":"PBO:0083382"}


id: MONDO:0004297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually aggressive primary thymic carcinoma, characterized by a syncytial growth of undifferentiated carcinoma cells and the presence of a lymphoplasmacytic infiltrate. More than 40% of cases are associated with Epstein-Barr virus infection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasopharyngeal type undifferentiated carcinoma","termid":"MONDO:0003572"},{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"lymphoepithelioma-like thymic carcinoma","secondary_identifiers":["MEDGEN:79026","DOID:7599","NCIT:C7998","UMLS:C0279706"],"synonyms":[{"name":"lymphoepithelial Thymus cancer","type":"exact"},{"name":"lymphoepithelial cancer of Thymus","type":"exact"},{"name":"lymphoepithelial cancer of the Thymus","type":"exact"},{"name":"lymphoepithelioma-like Thymus carcinoma","type":"exact"},{"name":"lymphoepithelioma-like carcinoma of Thymus","type":"exact"},{"name":"lymphoepithelioma-like carcinoma of the Thymus","type":"exact"},{"name":"lymphoepithelioma-like thymic carcinoma","type":"exact"},{"name":"malignant lymphoepithelial thymoma","type":"exact"},{"name":"thymic lymphoepithelioma-like carcinoma","type":"exact"}],"termid":"MONDO:0004297","xrefs":{"Monarch":{"xref_id":"0004297"}}}


id: MONDO:0011572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 5q31.1-q33.1.","definition_xrefs":["PMID:11175794","MONDO:patterns/inherited_susceptibility","DOID:0110755"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 18","secondary_identifiers":["OMIM:605598","MEDGEN:344213","MESH:C565315","UMLS:C1854125"],"synonyms":[{"name":"IDDM18","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 18","type":"related"},{"name":"insulin-dependent diabetes mellitus 18","type":"exact"}],"termid":"MONDO:0011572","xrefs":{"Monarch":{"xref_id":"0011572"}}}


id: PBO:0033824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex assembly protein Tom13 (predicted)","termid":"PBO:0033824"}


id: PBO:0018166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit, Ran GTPase binding protein Gid1 (predicted)","termid":"PBO:0018166"}


id: PBO:0075369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 7","termid":"PBO:0075369"}


id: GO:0050611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + arsenite + 2 oxidized azurin = 2 H+ + 2 reduced azurin + arsenate.","definition_xrefs":["MetaCyc:1.20.98.1-RXN","EC:1.20.9.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with a copper protein as acceptor","termid":"GO:0052882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arsenate reductase (azurin) activity","secondary_identifiers":["RHEA:18701","GO:0018691","UM-BBD_reactionID:r0634"],"synonyms":[{"name":"arsenite oxidase activity","type":"related"},{"name":"arsenite:azurin oxidoreductase activity","type":"related"}],"termid":"GO:0050611"}


id: MONDO:0859224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability and myopathy syndrome","secondary_identifiers":["UMLS:C5676904","MEDGEN:1808193","OMIM:619719"],"termid":"MONDO:0859224","xrefs":{"Monarch":{"xref_id":"0859224"}}}


id: MONDO:1012627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive degenerative myeloencephalopathy that occurs in cattle due to a mutation in the PNPLA8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative myeloencephalopathy, non-human animal","termid":"MONDO:1011866"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive degenerative myeloencephalopathy, PNPLA8-related, cattle","secondary_identifiers":["OMIA:000827-9913"],"synonyms":[{"name":"Weaver syndrome, cattle","type":"related"},{"name":"bovine degenerative progressive myeloencephalopathy","type":"related"},{"name":"haplotype BHW, cattle","type":"related"},{"name":"myeloencephalopathy, progressive degenerative, PNPLA8-related, cattle","type":"exact"}],"termid":"MONDO:1012627","xrefs":{"Monarch":{"xref_id":"1012627"}}}


id: PR:O14212
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6B12.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C6B12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.07c","synonyms":[{"name":"Spom972h-SPAC6B12.07c","type":"exact"}],"termid":"PR:O14212"}


id: MONDO:0016547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Beckwith-Wiedemann syndrome","termid":"MONDO:0007534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Beckwith-Wiedemann syndrome due to NSD1 mutation","secondary_identifiers":["GARD:17178","UMLS:C5680933","MEDGEN:1825953","Orphanet:238613"],"termid":"MONDO:0016547","xrefs":{"Monarch":{"xref_id":"0016547"}}}


id: GO:0097250
data:
  {"annotated_genes":["SJAG_02975","SJAG_03046"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96528,104461],"is_not":false,"summary":null,"term":"GO:0097250"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of respiratory enzyme complexes I, III and IV of the mitochondrial inner membrane to form a large supercomplex.","definition_xrefs":["PMID:30030361","PMID:32311046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02975":null,"SJAG_03046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0007005","GO:0044085"],"is_obsolete":false,"name":"mitochondrial respirasome assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial respiratory chain supercomplex assembly","type":"exact"},{"name":"mitochondrial respiratory supercomplex assembly","type":"exact"}],"termid":"GO:0097250","terms_by_termid":{"GO:0097250":null}}


id: MONDO:0001529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A finding of low numbers of red and white blood cells and platelets in the peripheral blood.","definition_xrefs":["NCIT:C34889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"pancytopenia","secondary_identifiers":["ICD9:284.89","DOID:12450","ICD9:284.1","MEDGEN:18281","MESH:D010198","SCTID:127034005","UMLS:C0030312"],"termid":"MONDO:0001529","xrefs":{"Monarch":{"xref_id":"0001529"}}}


id: PBO:0057839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3155a","termid":"PBO:0057839"}


id: PBO:0079919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein pseudogene 4","termid":"PBO:0079919"}


id: PBO:0067276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 354, pseudogene","termid":"PBO:0067276"}


id: MONDO:0014258
data:
  {"annotated_genes":["SJAG_04549"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87647],"is_not":false,"summary":null,"term":"MONDO:0014258"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:391376","MEDGEN:816301","OMIM:615574","GARD:17617","UMLS:C3809971"],"synonyms":[{"name":"ASNSD","type":"related"},{"name":"Asns deficiency","type":"related"},{"name":"asparagine synthetase deficiency","type":"exact"},{"name":"congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome","type":"exact"}],"termid":"MONDO:0014258","terms_by_termid":{"MONDO:0014258":null},"xrefs":{"Monarch":{"xref_id":"0014258"}}}


id: GO:0038003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by an opioid binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:bf","PMID:20494127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled opioid receptor signaling pathway","secondary_identifiers":["Wikipedia:Opioid_receptor"],"synonyms":[{"name":"opioid receptor signaling pathway","type":"broad"},{"name":"opioid receptor signalling pathway","type":"exact"}],"termid":"GO:0038003"}


id: PBO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 33B","termid":"PBO:0052793"}


id: GO:0015658
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104705,111981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"}]},"cv_name":"molecular_function","definition":"Enables the transfer of branched-chain amino acids from one side of a membrane to the other. Branched-chain amino acids are amino acids with a branched carbon skeleton without rings.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:bf","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"branched-chain amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901240","Reactome:R-HSA-9672770"],"synonyms":[{"name":"branched-chain aliphatic amino acid transmembrane transporter activity","type":"exact"},{"name":"branched-chain aliphatic amino acid transporter activity","type":"exact"},{"name":"leucine/valine/isoleucine permease activity","type":"related"},{"name":"valine/tyrosine/tryptophan permease activity","type":"related"}],"termid":"GO:0015658","terms_by_termid":{"GO:0015188":null}}


id: PBO:0081188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 1","termid":"PBO:0081188"}


id: PBO:0074482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 1","termid":"PBO:0074482"}


id: MONDO:0005234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polymyositis (obsolete MONDO:0005234)","termid":"MONDO:0005234","xrefs":{"Monarch":{"xref_id":"0005234"}}}


id: PBO:0078702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 4-1","termid":"PBO:0078702"}


id: MONDO:0014920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any patterned macular dystrophy in which the cause of the disease is a mutation in the MAPKAPK3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patterned macular dystrophy","termid":"MONDO:0020381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"patterned macular dystrophy 3","secondary_identifiers":["ICD10CM:H35.5","OMIM:617111","MEDGEN:934680","Orphanet:466718","DOID:0060865","UMLS:C4310713","GARD:17826"],"synonyms":[{"name":"MAPKAPK3 patterned macular dystrophy","type":"exact"},{"name":"MCRPE","type":"exact"},{"name":"MDPT3","type":"exact"},{"name":"Martinique crinkled retinal pigment epitheliopathy","type":"exact"},{"name":"macular dystrophy, patterned, 3","type":"exact"},{"name":"macular dystrophy, patterned, type 3","type":"exact"},{"name":"patterned macular dystrophy caused by mutation in MAPKAPK3","type":"exact"},{"name":"patterned macular dystrophy type 3","type":"exact"}],"termid":"MONDO:0014920","xrefs":{"Monarch":{"xref_id":"0014920"}}}


id: PBO:0084550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; active during alcoholic fermentation, regulated by anaerobiosis, inhibited by oxygen, repressed by heme","termid":"PBO:0084550"}


id: GO:0002537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of nitric oxide following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitric oxide production involved in inflammatory response","synonyms":[{"name":"nitric oxide production involved in acute inflammatory response","type":"broad"},{"name":"production of nitric oxide involved in acute inflammatory response","type":"broad"},{"name":"production of nitric oxide involved in inflammatory response","type":"exact"}],"termid":"GO:0002537"}


id: MONDO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by leakage of intravascular fluids into the extravascular space. This syndrome is observed in patients who demonstrate a state of generalized leaky capillaries following shock syndromes, low-flow states, ischemia-reperfusion injuries, toxemias, medications, or poisoning. It can lead to generalized edema and multiple organ failure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary disorder","termid":"MONDO:0001574"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capillary leak syndrome","secondary_identifiers":["GARD:1084","Orphanet:188","DOID:14400","EFO:1001284","ICD9:448.9","MEDGEN:137987","NCIT:C62578","UMLS:C0343084","MedDRA:10007196","MESH:D019559","SCTID:87730004"],"synonyms":[{"name":"AVLS","type":"exact"},{"name":"CLS","type":"exact"},{"name":"Clarkson disease","type":"exact"},{"name":"SCLS","type":"exact"},{"name":"acute vascular leak syndrome","type":"exact"},{"name":"capillary hyperpermeability syndrome","type":"exact"},{"name":"capillary leak syndrome","type":"exact"},{"name":"capillary leak syndrome with monoclonal gammopathy","type":"related"},{"name":"idiopathic capillary leak syndrome","type":"exact"},{"name":"periodic systemic capillary leak syndrome","type":"related"},{"name":"systemic capillary leak syndrome","type":"exact"}],"termid":"MONDO:0001956","xrefs":{"Monarch":{"xref_id":"0001956"}}}


id: PBO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K12_acetylation_at_subtelomere","termid":"PBO:0032723"}


id: PBO:0054717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2126","termid":"PBO:0054717"}


id: GO:0150059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular amylin, or another ligand, combining with an amylin receptor 1 (AMY1), a G protein-coupled receptor complex, on the surface of the target cell. Other ligands that have been shown to initiate the AMY1 signaling pathway include the calcitonin related peptide (CGRP) and adrenomedullin (AM/ADM).","definition_xrefs":["PMID:22500019","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor signaling pathway","termid":"GO:0097647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"amylin receptor 1 signaling pathway","synonyms":[{"name":"AMY1 signaling pathway","type":"exact"}],"termid":"GO:0150059"}


id: PBO:0079516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYMS opposite strand RNA","termid":"PBO:0079516"}


id: MONDO:0026181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic renal or urinary tract malformation (obsolete MONDO:0026181)","secondary_identifiers":["Orphanet:183539"],"termid":"MONDO:0026181","xrefs":{"Monarch":{"xref_id":"0026181"}}}


id: PBO:0001815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDR subfamily","termid":"PBO:0001815"}


id: GO:1905242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',5-triiodo-L-thyronine stimulus.","definition_xrefs":["PMID:21382270","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',5-triiodo-L-thyronine","synonyms":[{"name":"response to Liothyronin","type":"exact"},{"name":"response to Liothyronine","type":"exact"},{"name":"response to Liothyroninum","type":"exact"}],"termid":"GO:1905242"}


id: PBO:0017823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly protein Nas2 (predicted)","termid":"PBO:0017823"}


id: GO:0033722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate + NAD(P)+ + H2O = malonate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"malonate-semialdehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:MALONATE-SEMIALDEHYDE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"3-oxopropanoate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"malonic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0033722"}


id: PBO:0014253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insertional Suppressor of Sme2","termid":"PBO:0014253"}


id: PR:Q8TFG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB15E9.02c gene.","definition_xrefs":["UniProtKB:Q8TFG8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein PB15E9.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB15E9.02c","synonyms":[{"name":"Spom972h-SPAPB15E9.02c","type":"exact"}],"termid":"PR:Q8TFG8"}


id: PBO:0017913
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mcm2, Mcm4, and Mcm7 associate with chromatin simultaneously","termid":"PBO:0017913"}


id: PBO:0066167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal biogenesis factor","termid":"PBO:0066167"}


id: MOD:01670
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-methyl-L-lysine.","definition_xrefs":["RESID:AA0524","PubMed:16091367","PubMed:16195462","PubMed:17260957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"halogenated lysine","termid":"MOD:01672"},{"relation_name":"is_a","term_name":"monochlorinated residue","termid":"MOD:01911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-chloro-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(chloroamino)hexanoic acid","type":"exact"},{"name":"N(zeta)-chlorolysine","type":"exact"},{"name":"N6-chloro-L-lysine","type":"exact"},{"name":"N6ClLys","type":"exact"},{"name":"epsilon-chlorolysine","type":"exact"},{"name":"lysine chloramine","type":"exact"}],"termid":"MOD:01670"}


id: PBO:0031855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-haplosufficient","termid":"PBO:0031855"}


id: FYPO:0001628
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-valine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular valine level","termid":"FYPO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal vacuolar valine level","synonyms":[{"name":"normal level of valine in vacuole","type":"exact"},{"name":"normal vacuolar L-valine level","type":"exact"},{"name":"normal vacuolar valine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar valine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001628"}


id: GO:2000060
data:
  {"annotated_genes":["SJAG_00642","SJAG_03699","SJAG_02723","SJAG_00071","SJAG_03048","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[113675,108586,119064,110841,104280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of proteolysis involved in protein catabolic process","termid":"GO:1903052"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000058"},{"relation_name":"positively_regulates","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_01210":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of protein degradation tagging activity","type":"related"},{"name":"positive regulation of protein ubiquitination during ubiquitin-dependent protein breakdown","type":"narrow"},{"name":"positive regulation of protein ubiquitination during ubiquitin-dependent protein catabolism","type":"narrow"},{"name":"positive regulation of protein ubiquitination during ubiquitin-dependent protein degradation","type":"narrow"},{"name":"positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"positive regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"positive regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolism","type":"narrow"},{"name":"positive regulation of protein ubiquitylation during ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"positive regulation of protein ubiquitylation during ubiquitin-dependent protein catabolism","type":"narrow"}],"termid":"GO:2000060","terms_by_termid":{"GO:0032436":null,"GO:1905786":null}}


id: GO:1902988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a neurofibrillary tangle.","definition_xrefs":["GOC:sjp","PMID:15897157","PMID:24154541","PMID:22986780","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"neurofibrillary tangle assembly","synonyms":[{"name":"flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"neurofibrillary tangle formation","type":"exact"},{"name":"star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902988"}


id: PBO:0087433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis","termid":"PBO:0087433"}


id: PBO:0046042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit A","termid":"PBO:0046042"}


id: PBO:0003515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm2","termid":"PBO:0003515"}


id: FYPO:0000518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nuclear transport during vegetative growth","synonyms":[{"name":"abnormal nuclear transport during mitotic cell cycle","type":"related"},{"name":"nuclear transport: abnormal during vegetative growth","type":"related"}],"termid":"FYPO:0000518"}


id: GO:1902245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cis-abienol.","definition_xrefs":["GOC:TermGenie","PMID:22672125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"cis-abienol metabolic process","termid":"GO:1902244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cis-abienol catabolic process","synonyms":[{"name":"cis-abienol breakdown","type":"exact"},{"name":"cis-abienol catabolism","type":"exact"},{"name":"cis-abienol degradation","type":"exact"}],"termid":"GO:1902245"}


id: PBO:0034147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_mutualism","termid":"PBO:0034147"}


id: GO:0006204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of IMP, inosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate catabolic process","termid":"GO:0009169"},{"relation_name":"is_a","term_name":"IMP metabolic process","termid":"GO:0046040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"IMP catabolic process","synonyms":[{"name":"IMP breakdown","type":"exact"},{"name":"IMP catabolism","type":"exact"},{"name":"IMP degradation","type":"exact"}],"termid":"GO:0006204"}


id: MONDO:0014387
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88259],"is_not":false,"summary":null,"term":"MONDO:0014387"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy with vanishing white matter","termid":"MONDO:0800448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy, progressive, with ovarian failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:863025","NANDO:1200952","DOID:0070396","OMIM:615889","GARD:18252","UMLS:C4014588"],"synonyms":[{"name":"LKENP","type":"related"},{"name":"leukoencephalopathy, progressive, with ovarian failure","type":"exact"}],"termid":"MONDO:0014387","terms_by_termid":{"MONDO:0014387":null},"xrefs":{"Monarch":{"xref_id":"0014387"}}}


id: MOD:00419
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to (R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid.","definition_xrefs":["DeltaMass:336","PubMed:12643538","Unimod:26#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"(R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid","synonyms":[{"name":"(R)-5-oxoperhydro-1,4-thiazine-3-carboxylic acid","type":"exact"},{"name":"5-oxothiomorpholine-3-carboxylic acid","type":"exact"},{"name":"Otc","type":"exact"},{"name":"Pyro-carbamidomethyl","type":"related"},{"name":"S-carbamoylmethylcysteine cyclization (N-terminus)","type":"exact"}],"termid":"MOD:00419"}


id: GO:0042586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formyl-L-methionyl peptide + H2O = formate + methionyl peptide.","definition_xrefs":["GOC:jl","EC:3.5.1.88"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptide deformylase activity","secondary_identifiers":["RHEA:24420","MetaCyc:3.5.1.88-RXN"],"synonyms":[{"name":"PDF activity","type":"related"},{"name":"formyl-L-methionyl peptide amidohydrolase activity","type":"related"},{"name":"polypeptide deformylase activity","type":"related"}],"termid":"GO:0042586"}


id: PBO:0031661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pseudohyphal_growth","termid":"PBO:0031661"}


id: FYPO:0003840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to carbendazim (mecarzole; MBC). Cells stop growing (and may die) at a concentration of carbendazim that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to carbendazim","synonyms":[{"name":"hypersensitive to carbendazim","type":"exact"},{"name":"sensitive to MBC","type":"exact"},{"name":"sensitive to carbendazim during mitotic cell cycle","type":"related"},{"name":"sensitive to carbendazim during vegetative growth","type":"exact"},{"name":"sensitive to mecarzole","type":"exact"},{"name":"sensitive to methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"sensitive to methylbenzylcarbamylate","type":"exact"}],"termid":"FYPO:0003840"}


id: MONDO:0003180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A adenoid cystic carcinoma that involves the skin of body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"sweat gland carcinoma","termid":"MONDO:0005524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"cutaneous adenocystic carcinoma","secondary_identifiers":["SCTID:254711000","NCIT:C4471","UMLS:C0346017","MEDGEN:91071","DOID:4871"],"synonyms":[{"name":"adenoid cystic carcinoma of skin","type":"exact"},{"name":"adenoid cystic carcinoma of the skin","type":"exact"},{"name":"adenoid cystic cutaneous carcinoma","type":"exact"},{"name":"adenoid cystic eccrine carcinoma","type":"exact"},{"name":"adenoid cystic eccrine carcinoma (morphologic abnormality)","type":"exact"},{"name":"adenoid cystic eccrine carcinoma of skin","type":"exact"},{"name":"adenoid cystic skin carcinoma","type":"exact"},{"name":"primary cutaneous adenocystic carcinoma","type":"exact"},{"name":"skin of body adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0003180","xrefs":{"Monarch":{"xref_id":"0003180"}}}


id: MONDO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A dilated cardiomyopathy that has material basis in mutations in the DMD gene.","definition_xrefs":["DOID:0060561"],"gene_count":0,"genotype_count":0,"name":"obsolete DMD-related dilated cardiomyopathy (obsolete MONDO:0000810)","termid":"MONDO:0000810","xrefs":{"Monarch":{"xref_id":"0000810"}}}


id: PBO:0067596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 759, pseudogene","termid":"PBO:0067596"}


id: MONDO:0009564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marden-Walker syndrome (MWS) is a malformation syndrome characterized by multiple joint contractures (arthrogryposis), a mask-like face with blepharophimosis, micrognathia, high-arched or cleft palate, low-set ears, decreased muscular bulk, kyphoscoliosis and arachnodactyly.","definition_xrefs":["Orphanet:2461"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marden-Walker syndrome","secondary_identifiers":["GARD:6973","MEDGEN:163206","OMIM:248700","ICD9:759.89","SCTID:449824004","UMLS:C0796033","icd11.foundation:1983460876","MESH:C535910"],"synonyms":[{"name":"MARDEN-WALKER syndrome","type":"related"},{"name":"MWKS","type":"related"},{"name":"Marden Walker Syndrome","type":"exact"},{"name":"Marden-Walker syndrome","type":"exact"},{"name":"Mws","type":"related"},{"name":"connective tissue disorder Marden Walker type","type":"related"}],"termid":"MONDO:0009564","xrefs":{"Monarch":{"xref_id":"0009564"}}}


id: PBO:0053870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1145","termid":"PBO:0053870"}


id: PBO:0085454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Posttranscriptional regulator of phosphate and glucose metabolism; facilitates PHO4 mRNA degradation by interacting with Pop2p; regulates PHO4 mRNA stability by binding to PHO4's 3'UTR in a phosphate-dependent manner; contains highly conserved YTH (YT521-B Homology) domain that exhibits RNA-binding activity; human homolog YTHDF2 can complement yeast null mutant","termid":"PBO:0085454"}


id: GO:0050020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinonate = 2-dehydro-3-deoxy-L-arabinonate + H2O.","definition_xrefs":["EC:4.2.1.25","RHEA:20968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"L-arabinonate dehydratase activity","secondary_identifiers":["MetaCyc:L-ARABINONATE-DEHYDRATASE-RXN","KEGG_REACTION:R02522"],"synonyms":[{"name":"L-arabinonate hydro-lyase (2-dehydro-3-deoxy-L-arabinonate-forming)","type":"related"},{"name":"L-arabinonate hydro-lyase activity","type":"related"},{"name":"L-arabonate dehydrase activity","type":"related"},{"name":"L-arabonate dehydratase activity","type":"related"}],"termid":"GO:0050020"}


id: PBO:0064835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 11 pseudogene 1","termid":"PBO:0064835"}


id: PBO:0058365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4737","termid":"PBO:0058365"}


id: PBO:0116540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Lcl3","termid":"PBO:0116540"}


id: PBO:0054943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2357","termid":"PBO:0054943"}


id: PATO:0001663
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solubility which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"soluble in","termid":"PATO:0001537"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased solubility","synonyms":[{"name":"high solubility","type":"exact"}],"termid":"PATO:0001663"}


id: PBO:0048391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS1 adjacent regulatory RNA","termid":"PBO:0048391"}


id: PBO:0044753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExD-box helicase 39B","termid":"PBO:0044753"}


id: PBO:0077605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11G, pseudogene","termid":"PBO:0077605"}


id: GO:1902577
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100304],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a medial cortical node.","definition_xrefs":["PMID:24127216","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to medial cortex","termid":"GO:0071574"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in medial cortical node","type":"exact"},{"name":"protein localisation to medial cortical node","type":"exact"},{"name":"protein localization in medial cortical node","type":"exact"}],"termid":"GO:1902577","terms_by_termid":{"GO:0120047":null}}


id: PR:O13874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized NOC2 family protein C1B3.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.09c","synonyms":[{"name":"Spom972h-SPAC1B3.09c","type":"exact"}],"termid":"PR:O13874"}


id: PBO:0082588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cis-golgi localized monothiol glutaredoxin; more similar in activity to dithiol than other monothiol glutaredoxins; involved in the oxidative stress response; does not bind metal ions; GRX7 has a paralog, GRX6, that arose from the whole genome duplication","termid":"PBO:0082588"}


id: GO:0034690
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaD subunit and one beta2 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"integrin alphaD-beta2 complex","synonyms":[{"name":"Itgad-Itgb2 complex","type":"narrow"},{"name":"alphaD-beta2 integrin complex","type":"exact"}],"termid":"GO:0034690"}


id: MONDO:1011771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial coronoid disease, non-human animal","secondary_identifiers":["OMIA:001863"],"termid":"MONDO:1011771","xrefs":{"Monarch":{"xref_id":"1011771"}}}


id: PBO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological role inferred","termid":"PBO:0000002"}


id: PBO:0065573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin-endoperoxide synthase 1","termid":"PBO:0065573"}


id: PBO:0082662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; interacts with the A-rich polyadenylation signal in complex with Rna14p and Hrp1p; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping and maintenance of genome stability","termid":"PBO:0082662"}


id: PBO:0069841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1127, pseudogene","termid":"PBO:0069841"}


id: GO:1905451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Fc-gamma receptor signaling pathway involved in phagocytosis.","definition_xrefs":["GOC:TermGenie","PMID:18832707","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"positive regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060369"},{"relation_name":"is_a","term_name":"regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:1905449"},{"relation_name":"positively_regulates","term_name":"Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:0038096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"activation of Fc gamma receptor-dependent phagocytosis","type":"narrow"},{"name":"activation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"narrow"},{"name":"activation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"narrow"},{"name":"activation of Fcgamma receptor-mediated phagocytosis","type":"narrow"},{"name":"activation of IgG-mediated phagocytosis","type":"narrow"},{"name":"positive regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"positive regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"positive regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"positive regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"up regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"up regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"up regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"up regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"up regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"up-regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"up-regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"up-regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"up-regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"up-regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"upregulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"upregulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"upregulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"upregulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"upregulation of IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:1905451"}


id: PBO:0075066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-29","termid":"PBO:0075066"}


id: MONDO:0007350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma","termid":"MONDO:0001476"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma, ocular, autosomal dominant","secondary_identifiers":["UMLS:C5886785","OMIM:120200","MEDGEN:1859952"],"synonyms":[{"name":"coloboma of iris, choroid, and retina","type":"related"},{"name":"coloboma, Uveoretinal","type":"related"},{"name":"coloboma, ocular","type":"exact"},{"name":"coloboma, ocular, autosomal dominant","type":"exact"}],"termid":"MONDO:0007350","xrefs":{"Monarch":{"xref_id":"0007350"}}}


id: PBO:0087932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transketolase; catalyzes conversion of xylulose-5-phosphate and ribose-5-phosphate to sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate in the pentose phosphate pathway; needed for synthesis of aromatic amino acids; TKL2 has a paralog, TKL1, that arose from the whole genome duplication","termid":"PBO:0087932"}


id: GO:0050638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + taxa-4(20),11-dien-5alpha-ol = CoA + taxa-4(20),11-dien-5alpha-yl acetate.","definition_xrefs":["RHEA:22028","EC:2.3.1.162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"taxadien-5-alpha-ol O-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.162-RXN","KEGG_REACTION:R06307"],"synonyms":[{"name":"acetyl coenzyme A: taxa-4(20),11(12)-dien-5alpha-ol O-acetyl transferase activity","type":"related"},{"name":"acetyl coenzyme A:taxa-4(20),11(12)-dien-5-alpha-ol O-acetyl transferase activity","type":"related"},{"name":"acetyl-CoA:taxa-4(20),11-dien-5alpha-ol O-acetyltransferase activity","type":"related"},{"name":"taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase activity","type":"related"},{"name":"taxadien-5a-ol O-acetyltransferase activity","type":"exact"},{"name":"taxadien-5alpha-ol O-acetyltransferase activity","type":"related"},{"name":"taxadienol acetyltransferase activity","type":"related"}],"termid":"GO:0050638"}


id: GO:0035769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a B cell to cross a high endothelial venule in response to an external stimulus.","definition_xrefs":["CL:0000236","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis across high endothelial venule","termid":"GO:0002518"},{"relation_name":"is_a","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell chemotaxis across high endothelial venule","synonyms":[{"name":"B-cell chemotaxis across high endothelial venule","type":"exact"}],"termid":"GO:0035769"}


id: PR:Q09868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cip2 gene.","definition_xrefs":["UniProtKB:Q09868","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding post-transcriptional regulator cip2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.03","synonyms":[{"name":"Spom972h-cip2","type":"exact"},{"name":"csx1-interacting protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09868"}


id: MONDO:0004021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the mediastinum. Representative examples include mediastinal (thymic) large B-cell lymphoma and Hodgkin lymphoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"mediastinal cancer","termid":"MONDO:0005843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"mediastinal malignant lymphoma","secondary_identifiers":["DOID:6868","MEDGEN:235311","UMLS:C1334665","NCIT:C6633"],"synonyms":[{"name":"lymphoma of mediastinum","type":"exact"},{"name":"lymphoma of the mediastinum","type":"exact"},{"name":"mediastinal lymphoma","type":"exact"},{"name":"mediastinal malignant lymphoma","type":"exact"},{"name":"mediastinum lymphoma","type":"exact"},{"name":"primary mediastinal lymphoma","type":"exact"}],"termid":"MONDO:0004021","xrefs":{"Monarch":{"xref_id":"0004021"}}}


id: PBO:0077378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 120A","termid":"PBO:0077378"}


id: PBO:0031615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transposition","termid":"PBO:0031615"}


id: GO:0018316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of two peptidyl-cysteine residues to form a peptidyl-L-cystine (dicysteine) in which segments of peptide chain are linked by a disulfide bond; the cross-link may be between different or the same peptide chain.","definition_xrefs":["RESID:AA0025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide cross-linking","termid":"GO:0018149"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide cross-linking via L-cystine","termid":"GO:0018316"}


id: GO:0030911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a tetratricopeptide repeat (TPR) domain of a protein, the consensus sequence of which is defined by a pattern of small and large hydrophobic amino acids and a structure composed of helices.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"TPR domain binding","synonyms":[{"name":"tetratricopeptide repeat domain binding","type":"exact"}],"termid":"GO:0030911"}


id: MONDO:0003130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solid, unencapsulated tumor of the kidney composed of spindle mesenchymal cells that resemble fibroblasts or muscle cells. The homogeneous mass typically extends into the renal parenchyma and replaces most of the kidney. In most cases, mesoblastic nephroma is benign and occurs in the fetus or newborn, and rarely in the older child or the adult.","definition_xrefs":["MESH:D018201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"mesoblastic nephroma","secondary_identifiers":["SCTID:307604008","UMLS:C0206628","EFO:0007365","DOID:4772","ICD9:236.99","MEDGEN:64620"],"synonyms":[{"name":"mesoblastic nephroma","type":"exact"},{"name":"mesoblastic nephroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003130","xrefs":{"Monarch":{"xref_id":"0003130"}}}


id: FYPO:0005066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at centromere during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at centromeric region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 methylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0005066"}


id: PR:O94660
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nitrilase homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase nit2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.02","secondary_identifiers":["UniProtKB:O94660"],"synonyms":[{"name":"Spom972h-NIT1","type":"exact"}],"termid":"PR:O94660"}


id: GO:0047345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + ADP + H+ = ADP-ribose + phosphate.","definition_xrefs":["EC:2.7.7.35","RHEA:14529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ribose-5-phosphate adenylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01052","MetaCyc:2.7.7.35-RXN"],"synonyms":[{"name":"ADP ribose phosphorylase activity","type":"related"},{"name":"ADP-ribose phosphorylase activity","type":"related"},{"name":"ADP:D-ribose-5-phosphate adenylyltransferase activity","type":"related"},{"name":"ADP:ribose-5-phosphate adenylyltransferase activity","type":"exact"},{"name":"adenosine diphosphoribose phosphorylase activity","type":"related"}],"termid":"GO:0047345"}


id: MONDO:1010880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in cats due to a mutation in the CLN6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, domestic cat","termid":"MONDO:1011571"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN6-related, domestic cat","secondary_identifiers":["OMIA:001443-9685"],"synonyms":[{"name":"CLN6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 6, domestic cat","type":"related"}],"termid":"MONDO:1010880","xrefs":{"Monarch":{"xref_id":"1010880"}}}


id: GO:0061097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}


id: PR:Q9P7M7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P27G11.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.11c","synonyms":[{"name":"Spom972h-SPAP27G11.11c","type":"exact"}],"termid":"PR:Q9P7M7"}


id: PBO:0070246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 187 pseudogene","termid":"PBO:0070246"}


id: PBO:0091449
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds S. pombe telomeric repeats with flexible sequence recognition requirements","termid":"PBO:0091449"}


id: PBO:0069053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 299, pseudogene","termid":"PBO:0069053"}


id: PBO:0036387
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Rhodotorula minuta DPS1","termid":"PBO:0036387"}


id: GO:0014061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of norepinephrine secretion","synonyms":[{"name":"regulation of noradrenaline secretion","type":"exact"}],"termid":"GO:0014061"}


id: PBO:0017516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin/PY protein involved in ubiquitin-mediated endocytosis Rod1 (predicted)","termid":"PBO:0017516"}


id: PBO:0116638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF guanine nucleotide exchange factor 1","termid":"PBO:0116638"}


id: MOD:01608
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N2-(L-isoglutamyl)-L-lysine. This is not an isopeptide cross-link.","definition_xrefs":["RESID:AA0505","PubMed:19620981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2-(L-isoglutamyl)-L-lysine","synonyms":[{"name":"(2S)-6-amino-2-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"5-glutamyl N2-lysine","type":"exact"},{"name":"MOD_RES 5-glutamyl N2-lysine","type":"exact"},{"name":"N2-(L-isoglutamyl)-L-lysine","type":"exact"},{"name":"N2-(gamma-glutamyl)lysine","type":"exact"},{"name":"alpha-(gamma-glutamyl)lysine","type":"exact"},{"name":"gamma-glutamyl N2-lysine","type":"exact"}],"termid":"MOD:01608"}


id: PR:O74540
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fmd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.04c","synonyms":[{"name":"FALDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FLD 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GSH-FDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fmd3","type":"exact"},{"name":"glutathione-dependent formaldehyde dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74540"}


id: GO:0034887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,4-dihydroisonicotinate + O2 = gamma-N-formylaminovinylacetaldehyde + CO2.","definition_xrefs":["UM-BBD_reactionID:r1348"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,4-dihydroisonicotinate 2,3-dioxygenase activity (obsolete GO:0034887)","synonyms":[{"name":"1,4-dihydroisonicotinate 2,3-dioxygenase activity","type":"exact"}],"termid":"GO:0034887"}


id: PBO:0078813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA nucleotidyl transferase 1","termid":"PBO:0078813"}


id: GO:0005131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth hormone receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"hormone receptor binding","termid":"GO:0051427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"growth hormone receptor binding","synonyms":[{"name":"growth hormone","type":"narrow"},{"name":"growth hormone receptor ligand","type":"narrow"}],"termid":"GO:0005131"}


id: PBO:0057319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518f","termid":"PBO:0057319"}


id: PR:Q9UTN1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 34 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00402","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial oxaloacetate transport protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.02c","secondary_identifiers":["UniProtKB:Q9UTN1"],"synonyms":[{"name":"Spom972h-SLC25A34","type":"exact"}],"termid":"PR:Q9UTN1"}


id: FYPO:0007281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during meiosis measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:32012158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal level of meiotic gene mRNA during vegetative growth","synonyms":[{"name":"normal level of meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"normal level of meiotic gene RNA during vegetative growth","type":"exact"},{"name":"normal level of meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"normal level of meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"normal level of meiotic nuclear division gene mRNA during vegetative growth","type":"exact"},{"name":"normal meiotic gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0007281"}


id: CHEBI:44485
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethylmaleimide","termid":"CHEBI:44485"}


id: PBO:0061541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSUN5 pseudogene 1","termid":"PBO:0061541"}


id: PBO:0109547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex subunit Csc2","termid":"PBO:0109547"}


id: PBO:0063239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 4","termid":"PBO:0063239"}


id: PBO:0079385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 2A class IIa","termid":"PBO:0079385"}


id: GO:0010099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of photomorphogenesis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of response to red or far red light","termid":"GO:2000030"},{"relation_name":"regulates","term_name":"photomorphogenesis","termid":"GO:0009640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photomorphogenesis","termid":"GO:0010099"}


id: GO:0002414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting immunoglobulin, via transcytosis, from one side of an epithelial cell to the other.","definition_xrefs":["PMID:16048543","GOC:add","ISBN:0781735149","ISBN:081533642X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcytosis","termid":"GO:0045056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"immunoglobulin transcytosis in epithelial cells","termid":"GO:0002414"}


id: MONDO:0022425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alpha-thalassemia-abnormal morphogenesis (obsolete MONDO:0022425)","termid":"MONDO:0022425","xrefs":{"Monarch":{"xref_id":"0022425"}}}


id: PBO:0061629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 12","termid":"PBO:0061629"}


id: PBO:0078344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 10-1","termid":"PBO:0078344"}


id: GO:0140728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GC-box, a DNA motif with the consensus sequence GGGCGG that is located upstream of the start point of eukaryotic transcription units. The GC-box may occur in multiple copies or in either orientation relative to the transcription start site.","definition_xrefs":["PMID:14701757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0000976","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"GC-box binding","synonyms":[{"name":"GC box binding","type":"exact"},{"name":"GC rich promoter region binding","type":"broad"},{"name":"GC-rich region binding","type":"broad"},{"name":"GC_rich_promoter_region binding","type":"broad"}],"termid":"GO:0140728"}


id: GO:0018281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-serine ethanolamide-linked glycosylsphingolipidinositol (GSI) anchor following hydrolysis of a seryl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0166"],"gene_count":0,"genotype_count":0,"name":"obsolete GSI anchor biosynthetic process via N-seryl-glycosylsphingolipidinositolethanolamine (obsolete GO:0018281)","synonyms":[{"name":"GSI anchor anabolism via N-seryl-glycosylsphingolipidinositolethanolamine","type":"exact"},{"name":"GSI anchor formation via N-seryl-glycosylsphingolipidinositolethanolamine","type":"exact"},{"name":"GSI anchor synthesis via N-seryl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"GO:0018281"}


id: PBO:0065251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20D","termid":"PBO:0065251"}


id: PBO:0077771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 34","termid":"PBO:0077771"}


id: GO:0140376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving a signal and transmitting it in a cell to initiate an innate immune response.","definition_xrefs":["PMID:28921463","PMID:31415752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"innate immune receptor activity","termid":"GO:0140376"}


id: PR:O74426
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase 32A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04727","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.10","secondary_identifiers":["UniProtKB:O74426"],"synonyms":[{"name":"Spom972h-STK32A","type":"exact"}],"termid":"PR:O74426"}


id: PBO:0050392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 16","termid":"PBO:0050392"}


id: PBO:0046230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 23","termid":"PBO:0046230"}


id: GO:0062057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of L-aspartate and fumarate across a membrane according to the reaction L-aspartate (out) + fumarate (in) = L-aspartate (in) + fumarate (out).","definition_xrefs":["PMID:29995997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fumarate transmembrane transporter activity","termid":"GO:0015138"},{"relation_name":"is_a","term_name":"L-aspartate transmembrane transporter activity","termid":"GO:0015183"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-aspartate:fumarate antiporter activity","termid":"GO:0062057"}


id: PBO:0069651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 928, pseudogene","termid":"PBO:0069651"}


id: PBO:0068182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 489","termid":"PBO:0068182"}


id: MONDO:0006942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete reflex epilepsy (obsolete MONDO:0006942)","termid":"MONDO:0006942","xrefs":{"Monarch":{"xref_id":"0006942"}}}


id: GO:0018544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-carboxy-4'-sulfoazobenzene + 4 H+ + 4 e- = 4-aminobenzoate + 4-aminobenzenesulfonate.","definition_xrefs":["UM-BBD_reactionID:r0543"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-carboxy-4'-sulfoazobenzene reductase activity (obsolete GO:0018544)","synonyms":[{"name":"4-carboxy-4'-sulphoazobenzene reductase activity","type":"exact"}],"termid":"GO:0018544"}


id: FYPO:0000424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis begins later than normal. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of endocytosis during vegetative growth","synonyms":[{"name":"delayed endocytosis during vegetative growth","type":"exact"},{"name":"delayed onset of actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"delayed onset of endocytosis during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein internalization during vegetative growth","type":"narrow"},{"name":"endocytosis: delayed during vegetative growth","type":"related"}],"termid":"FYPO:0000424"}


id: PBO:0090088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein Eos1","termid":"PBO:0090088"}


id: GO:0018128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine cyclase activity (obsolete GO:0018128)","synonyms":[{"name":"peptidyl-serine cyclase activity","type":"exact"}],"termid":"GO:0018128"}


id: PBO:0068849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 87, pseudogene","termid":"PBO:0068849"}


id: PBO:0047464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCRL4 pseudogene 1","termid":"PBO:0047464"}


id: PBO:0014250
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes","termid":"PBO:0014250"}


id: GO:0099517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicles along microtubules within a cell, powered by molecular motors.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"synaptic vesicle cytoskeletal transport","termid":"GO:0099514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle transport along microtubule","termid":"GO:0099517"}


id: PBO:0088879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIP41 type 2a phosphatase regulator Tip41","termid":"PBO:0088879"}


id: PBO:0046486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC8 antisense RNA 1","termid":"PBO:0046486"}


id: PBO:0066321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBX1 pseudogene 1","termid":"PBO:0066321"}


id: PBO:0062959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 2","termid":"PBO:0062959"}


id: GO:0008350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete kinetochore motor activity (obsolete GO:0008350)","synonyms":[{"name":"kinetochore motor activity","type":"exact"}],"termid":"GO:0008350"}


id: FYPO:0002609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal at centromeric outer repeat regions. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H2A phosphorylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H2A phosphorylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H2A phosphorylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H2A phosphorylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H2A phosphorylation at pericentromeric region during vegetative growth","type":"related"},{"name":"reduced histone H2A phosphorylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002609"}


id: GO:0086027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from an AV node cardiac muscle cell to a bundle of His cardiomyocyte.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"AV node cell to bundle of His cell signaling","synonyms":[{"name":"AV node cell to bundle of His cell signalling","type":"exact"},{"name":"atrioventricular node to bundle of His cell signaling","type":"exact"}],"termid":"GO:0086027"}


id: PBO:0076885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX36 antisense RNA 1","termid":"PBO:0076885"}


id: PBO:0081414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 267","termid":"PBO:0081414"}


id: PBO:0046709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 7","termid":"PBO:0046709"}


id: PBO:0073678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 1","termid":"PBO:0073678"}


id: GO:0051736
data:
  {"annotated_genes":["SJAG_01791"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95308],"is_not":false,"summary":null,"term":"GO:0051736"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5'-dephospho-RNA = ADP + 5'-phospho-RNA.","definition_xrefs":["RHEA:54580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051734"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent RNA kinase activity","type":"exact"},{"name":"ATP-dependent polyribonucleotide kinase activity","type":"exact"},{"name":"polyribonucleotide 5'-hydroxyl-kinase activity","type":"broad"}],"termid":"GO:0051736","terms_by_termid":{"GO:0051736":null}}


id: GO:0045672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osteoclast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of osteoclast differentiation","termid":"GO:0045670"},{"relation_name":"positively_regulates","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoclast differentiation","synonyms":[{"name":"activation of osteoclast differentiation","type":"narrow"},{"name":"stimulation of osteoclast differentiation","type":"narrow"},{"name":"up regulation of osteoclast differentiation","type":"exact"},{"name":"up-regulation of osteoclast differentiation","type":"exact"},{"name":"upregulation of osteoclast differentiation","type":"exact"}],"termid":"GO:0045672"}


id: PBO:0073039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 2","termid":"PBO:0073039"}


id: PBO:0113193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major mitochondrial nuclease; has RNAse and DNA endo- and exonucleolytic activities; roles in mitochondrial recombination, apoptosis and maintenance of polyploidy; involved in fragmentation of genomic DNA during PND (programmed nuclear destruction); role in preventing L-A mycovirus pathogenesis; encodes ortholog of mammalian endoG","termid":"PBO:0113193"}


id: MONDO:0850273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A salivary gland carcinoma that is characterized by the presence of large pools of extracellular mucin in which clusters of malignant epithelial cells are found.","definition_xrefs":["DOID:0080800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"},{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"salivary gland mucinous adenocarcinoma","secondary_identifiers":["MEDGEN:364330","NCIT:C62193","UMLS:C1882973"],"termid":"MONDO:0850273","xrefs":{"Monarch":{"xref_id":"0850273"}}}


id: GO:0047793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cycloeucalenol = obtusifoliol.","definition_xrefs":["EC:5.5.1.9","RHEA:22800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"cycloeucalenol cycloisomerase activity","secondary_identifiers":["KEGG_REACTION:R03775","MetaCyc:CYCLOEUCALENOL-CYCLOISOMERASE-RXN"],"synonyms":[{"name":"cycloeucalenol lyase (cyclopropane-decyclizing)","type":"related"},{"name":"cycloeucalenol--obtusifoliol isomerase activity","type":"related"},{"name":"cycloeucalenol-obtusifoliol isomerase activity","type":"exact"}],"termid":"GO:0047793"}


id: MONDO:0019623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary angioedema (HAE) is a genetic disease characterized by the occurrence of transitory and recurrent subcutaneous and/or submucosal edemas resulting in swelling and/or abdominal pain.","definition_xrefs":["Orphanet:91378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angioedema","termid":"MONDO:0010481"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary angioedema","secondary_identifiers":["NANDO:2200795","icd11.foundation:795969334","NANDO:1200365","OMIMPS:106100","MESH:D054179","MedDRA:10019860","SCTID:82966003","MEDGEN:9229","UMLS:C0019243","NCIT:C84758","GARD:5979","DOID:14735"],"synonyms":[{"name":"HAE","type":"exact"},{"name":"HANE","type":"exact"},{"name":"angioedema, hereditary","type":"related"},{"name":"deficiency of C1 esterase inhibitor","type":"related"},{"name":"familial angioneurotic edema","type":"exact"},{"name":"familial angioneurotic oedema","type":"exact"},{"name":"hereditary angioedema","type":"exact"},{"name":"hereditary angioneurotic edema","type":"exact"},{"name":"hereditary angioneurotic oedema","type":"exact"},{"name":"hereditary bradykinine-induced angioedema","type":"exact"},{"name":"hereditary non histamine-induced angioedema","type":"exact"}],"termid":"MONDO:0019623","xrefs":{"Monarch":{"xref_id":"0019623"}}}


id: GO:0071592
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71649],"is_not":false,"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinic acid riboside, the product of the formation of a glycosidic bond between ribose and nicotinic acid.","definition_xrefs":["PMID:19846558","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleoside biosynthetic process","termid":"GO:0071589"},{"relation_name":"is_a","term_name":"nicotinic acid riboside metabolic process","termid":"GO:0071591"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nicotinic acid riboside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"D-ribosylnicotinic acid biosynthetic process","type":"exact"},{"name":"nicotinic acid riboside anabolism","type":"exact"},{"name":"nicotinic acid riboside biosynthesis","type":"exact"},{"name":"nicotinic acid riboside formation","type":"exact"},{"name":"nicotinic acid riboside synthesis","type":"exact"}],"termid":"GO:0071592","terms_by_termid":{"GO:0071592":null}}


id: CHEBI:29014
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordycepin","termid":"CHEBI:29014"}


id: MONDO:0030440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 22","secondary_identifiers":["OMIM:619531","MEDGEN:1794199","UMLS:C5561989","DOID:0081448"],"synonyms":[{"name":"CORD22","type":"exact"}],"termid":"MONDO:0030440","xrefs":{"Monarch":{"xref_id":"0030440"}}}


id: FYPO:0001999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleoside diphosphate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal nucleoside diphosphate kinase activity","termid":"FYPO:0001997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased nucleoside diphosphate kinase activity","termid":"FYPO:0001999"}


id: GO:1902930
data:
  {"annotated_genes":["SJAG_03538","SJAG_04018","SJAG_01307","SJAG_02104","SJAG_02044","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[111803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[115655,90859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"},{"annotations":[77258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[107761,90379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alcohol biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:23332010","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02406":null,"SJAG_03538":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of alcohol anabolism","type":"exact"},{"name":"regulation of alcohol biosynthesis","type":"exact"},{"name":"regulation of alcohol formation","type":"exact"},{"name":"regulation of alcohol synthesis","type":"exact"},{"name":"regulation of solventogenesis","type":"broad"}],"termid":"GO:1902930","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null,"GO:0090180":null}}


id: GO:0034993
data:
  {"annotated_genes":["SJAG_05196","SJAG_04558","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114808],"is_not":false,"summary":null,"term":"GO:0034993"},{"annotations":[98587,104717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A nuclear membrane protein complex which connects the nuclear outer and inner membranes together, and links links the nuclear lumen to cytoplasmic microtubules during meiosis.","definition_xrefs":["PMID:18692466","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane microtubule tethering complex","termid":"GO:0106094"},{"relation_name":"part_of","term_name":"microtubule organizing center attachment site","termid":"GO:0034992"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"meiotic nuclear membrane microtubule tethering complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"LINC complex","type":"exact"},{"name":"LInker of Nucleoskeleton and Cytoskeleton complex","type":"exact"},{"name":"SUN-KASH complex","type":"exact"}],"termid":"GO:0034993","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: GO:0002476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"},{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen","termid":"GO:0002483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib","synonyms":[{"name":"endogenous peptide antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002476"}


id: PBO:0004509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YjgF family protein Mmf1","termid":"PBO:0004509"}


id: GO:0046869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 2Fe-2S iron-sulfur cluster via tris-L-cysteinyl-L-aspartato diiron disulfide.","definition_xrefs":["RESID:AA0331"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-aspartato diiron disulfide (obsolete GO:0046869)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-aspartato diiron disulphide","type":"exact"}],"termid":"GO:0046869"}


id: PBO:0002982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class-III, unknown specificity","termid":"PBO:0002982"}


id: PBO:0047300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM, ARH/RhoGEF and pleckstrin domain protein 2","termid":"PBO:0047300"}


id: GO:0035968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of sterol import, by regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:12077145"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of sterol import by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035968)","synonyms":[{"name":"regulation of sterol import by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of sterol influx by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of sterol influx by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of sterol uptake by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of sterol uptake by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035968"}


id: PBO:0113431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single stranded DNA-binding protein found at TG1-3 telomere G-tails; key roles regulating telomerase, telomere end protection, and telomere replication; can dynamically intermolecularly exchange between telomeric single-stranded DNA molecules; essential function is telomere capping; forms homodimer via N-terminus; disruption of dimerization leads to short telomeres; autophagy and proteasome are involved in Cdc13p degradation; differentially phosphorylated through cell cycle","termid":"PBO:0113431"}


id: GO:0060515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the urogenital sinus epithelium into the area in which the prostate gland will develop.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate field specification","termid":"GO:0060515"}


id: PBO:0072186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 2","termid":"PBO:0072186"}


id: GO:0047122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + H2O + quinaldate = AH(2) + kynurenate.","definition_xrefs":["EC:1.3.99.18","RHEA:16697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"quinaldate 4-oxidoreductase activity","secondary_identifiers":["KEGG_REACTION:R03687","MetaCyc:1.3.99.18-RXN"],"synonyms":[{"name":"quinaldic acid 4-oxidoreductase activity","type":"related"},{"name":"quinoline-2-carboxylate:acceptor 4-oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0047122"}


id: PBO:0027653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitotic_S_phase_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027653"}


id: PBO:0047730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1","termid":"PBO:0047730"}


id: PBO:0085711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in spore wall assembly; has similarity to 1,3-beta-D-glucan synthase catalytic subunits Fks1p and Gsc2p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085711"}


id: GO:0004073
data:
  {"annotated_genes":["SJAG_00234"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65455],"is_not":false,"summary":null,"term":"GO:0004073"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate 4-semialdehyde + NADP+ + phosphate = 4-phospho-L-aspartate + H+ + NADPH.","definition_xrefs":["EC:1.2.1.11","RHEA:24284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00234":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"aspartate-semialdehyde dehydrogenase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R02291","MetaCyc:ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"ASA dehydrogenase activity","type":"related"},{"name":"L-aspartate-4-semialdehyde:NADP+ oxidoreductase (phosphorylating)","type":"related"},{"name":"L-aspartate-beta-semialdehyde dehydrogenase activity","type":"related"},{"name":"L-aspartate-beta-semialdehyde:NADP oxidoreductase (phosporylating)","type":"related"},{"name":"aspartate semialdehyde dehydrogenase activity","type":"related"},{"name":"aspartic beta-semialdehyde dehydrogenase activity","type":"related"},{"name":"aspartic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004073","terms_by_termid":{"GO:0004073":null}}


id: PBO:0087926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that stimulates expression of proteasome genes; Rpn4p levels are in turn regulated by the 26S proteasome in a negative feedback control mechanism; RPN4 is transcriptionally regulated by various stress responses; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087926"}


id: PBO:0079079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-7","termid":"PBO:0079079"}


id: GO:1990450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a linear polymer of ubiquitin. Linear ubiquitin polymers are formed by linking the amino-terminal methionine (M1) of one ubiquitin molecule to the carboxy-terminal glycine (G76) of the next.","definition_xrefs":["PMID:23453807","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin binding","termid":"GO:0043130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"linear polyubiquitin binding","synonyms":[{"name":"M1-linked ubiquitin chain binding","type":"exact"}],"termid":"GO:1990450"}


id: MOD:01754
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01754"}


id: PR:Q9P7C7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX46 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04347","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing ATP-dependent RNA helicase prp11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC10H11.01","secondary_identifiers":["UniProtKB:Q9P7C7"],"synonyms":[{"name":"Spom972h-DDX46","type":"exact"}],"termid":"PR:Q9P7C7"}


id: MONDO:0018999
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007620"},{"annotations":[87239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009515"}]},"cv_name":"mondo","definition":"LCAT (lecithin-cholesterol acyltransferase) deficiency is a rare lipoprotein metabolism disorder characterized clinically by corneal opacities, and sometimes renal failure and hemolytic anemia, and biochemically by severely reduced HDL cholesterol.","definition_xrefs":["Orphanet:650"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"hypoalphalipoproteinemia","termid":"MONDO:0017773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"LCAT deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200852","SCTID:49227001","MEDGEN:1830326","UMLS:C5779633","GARD:16539"],"synonyms":[{"name":"lecithin-cholesterol acyltransferase deficiency","type":"exact"}],"termid":"MONDO:0018999","terms_by_termid":{"MONDO:0007620":null,"MONDO:0009515":null},"xrefs":{"Monarch":{"xref_id":"0018999"}}}


id: GO:0004457
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004458"},{"annotations":[82197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008720"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: lactate + NAD+ = H+ + NADH + pyruvate.","definition_xrefs":["GOC:ai","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"lactate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0004457","terms_by_termid":{"GO:0004458":null,"GO:0008720":null}}


id: MONDO:0005743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with fungi of the genus encephalitozoon. Lesions commonly occur in the brain and kidney tubules. Other sites of infection in mammals are the liver; adrenal glands; optic nerves; retina; and myocardium.","definition_xrefs":["MESH:D016890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microsporidiosis","termid":"MONDO:0005846"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalitozoonosis","secondary_identifiers":["EFO:0007250","ICD9:136.8","SCTID:12825006","MEDGEN:39043","UMLS:C0085412","DOID:4270"],"synonyms":[{"name":"infection by Encephalitozoon","type":"exact"}],"termid":"MONDO:0005743","xrefs":{"Monarch":{"xref_id":"0005743"}}}


id: PR:O94383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR18937:SF12","PRO:DNx","OMA:SCHPO03319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.04","secondary_identifiers":["UniProtKB:O94383"],"synonyms":[{"name":"Spom972h-SMC1A","type":"exact"},{"name":"chromosome segregation protein smc1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cohesin complex subunit psm1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94383"}


id: PBO:0027906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_nucleus_and_mitotic_cell_cycle_arrest_in_interphase","termid":"PBO:0027906"}


id: PBO:0042142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 3 like 3","termid":"PBO:0042142"}


id: MONDO:0005225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myeloblastic leukemia with maturation (obsolete MONDO:0005225)","termid":"MONDO:0005225","xrefs":{"Monarch":{"xref_id":"0005225"}}}


id: MONDO:0700206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parvoviridae infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parvoviridae infectious disease, non-human animal","termid":"MONDO:0700206","xrefs":{"Monarch":{"xref_id":"0700206"}}}


id: SO:0001131
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type II (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, +80 degrees < psi +120 degrees < +180 degrees. Residue(i+1): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_right_handed_type_two","secondary_identifiers":["BS:00205"],"synonyms":[{"name":"asx turn right handed type two","type":"exact"},{"name":"asx_turn_iir","type":"exact"}],"termid":"SO:0001131"}


id: MONDO:0009840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Partington-Anderson syndrome","secondary_identifiers":["Orphanet:2829","OMIM:260555","UMLS:C1850075","MEDGEN:376699","MESH:C536299"],"synonyms":[{"name":"Partington-Anderson syndrome","type":"exact"}],"termid":"MONDO:0009840","xrefs":{"Monarch":{"xref_id":"0009840"}}}


id: MONDO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nevus of Ito is a benign dermal melanocytosis occurring most frequently in the Asian populations and characterized by unilateral, asymptomatic, blue, gray or brown skin pigmentation within the acromioclavicular and upper chest area (involving the side of the neck, the supraclavicular and scapular areas, and the shoulder region). It is usually diagnosed in early infancy and in early adolescence. Nevus of Ito may progressively enlarge and darken in color (particularly with puberty) and its appearance usually remains stable once adulthood is reached. Spontaneous regression does not occur. Malignant melanoma has rarely been reported within a nevus of Ito. It shares the clinical features of nevus of Ota, except its anatomic location and may in rare occasions occur together with the latter.","definition_xrefs":["Orphanet:263432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"nevus of Ito","secondary_identifiers":["GARD:10830","EFO:1000395","NCIT:C7582"],"synonyms":[{"name":"Ito's Nevus","type":"exact"},{"name":"hypomelanosis of Ito","type":"related"},{"name":"nevi of Ito","type":"exact"},{"name":"nevus fuscocaeruleus acromiodeltoideus","type":"exact"}],"termid":"MONDO:0016985","xrefs":{"Monarch":{"xref_id":"0016985"}}}


id: FYPO:0001142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man8GlcNAc2 measured in a cell is normal (i.e. indistinguishable from wild type). Man8GlcNAc2 is any N-glycan that consists of a branched ten-membered mannooligosaccharide containing eight D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["CHEBI:64048","PomBase:mah","CHEBI:64052","PMID:12686557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal polysaccharide level","termid":"FYPO:0001077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal Man8GlcNAc level","synonyms":[{"name":"normal Man8GlcNAc accumulation","type":"related"},{"name":"normal Man8GlcNAc level during mitotic cell cycle","type":"related"},{"name":"normal Man8GlcNAc level during vegetative growth","type":"exact"},{"name":"normal Man8GlcNAc2 level","type":"exact"},{"name":"normal cellular Man8GlcNAc level","type":"exact"}],"termid":"FYPO:0001142"}


id: PBO:0082189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol dehydrogenase isoenzyme V; involved in ethanol production; ADH5 has a paralog, ADH1, that arose from the whole genome duplication","termid":"PBO:0082189"}


id: MONDO:0020552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Placental site trophoblastic tumor is a rare gestational trophoblastic tumor (GTT) which develops from the placental implantation site and always occurs following pregnancy, voluntary termination of pregnancy (VTP) or miscarriage.","definition_xrefs":["Orphanet:99928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"},{"relation_name":"is_a","term_name":"gestational trophoblastic neoplasm","termid":"MONDO:0018944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placental site trophoblastic tumor","secondary_identifiers":["NCIT:C3757","ICDO:9104/1","EFO:1001111","DOID:3596","MEDGEN:104914","MESH:D018245","SCTID:237252008","ONCOTREE:PSTT","GARD:7403","UMLS:C0206666"],"synonyms":[{"name":"PSST","type":"exact"},{"name":"placental site gestational trophoblastic tumor","type":"exact"},{"name":"placental site gestational trophoblastic tumour","type":"exact"},{"name":"placental site trophoblastic tumor","type":"exact"},{"name":"placental site trophoblastic tumor (morphologic abnormality)","type":"exact"},{"name":"placental site trophoblastic tumour (morphologic abnormality)","type":"exact"},{"name":"placental-site GTT","type":"exact"},{"name":"placental-site gestational trophoblastic neoplasm","type":"exact"},{"name":"placental-site gestational trophoblastic tumor","type":"exact"},{"name":"placental-site gestational trophoblastic tumour","type":"exact"}],"termid":"MONDO:0020552","xrefs":{"Monarch":{"xref_id":"0020552"}}}


id: FYPO:0000633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to G418. Cells stop growing (and may die) at a concentration of G418 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to G418","synonyms":[{"name":"hypersensitive to G418","type":"exact"},{"name":"sensitive to G418 during mitotic cell cycle","type":"related"},{"name":"sensitive to G418 during vegetative growth","type":"exact"},{"name":"sensitive to Geneticin","type":"exact"}],"termid":"FYPO:0000633"}


id: PBO:0108907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1191 pseudogene 1","termid":"PBO:0108907"}


id: PBO:0073090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHB pseudogene 1","termid":"PBO:0073090"}


id: PBO:0061054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipsnap homolog 2","termid":"PBO:0061054"}


id: PBO:0061873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OOEP antisense RNA 1","termid":"PBO:0061873"}


id: GO:0009635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a herbicide stimulus. Herbicides are chemicals used to kill or control the growth of plants.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to herbicide","synonyms":[{"name":"herbicide susceptibility/resistance","type":"related"}],"termid":"GO:0009635"}


id: MONDO:0018740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methemoglobinemia that is caused by exposure to certain drugs (xylocaine and benzene).","definition_xrefs":["NCIT:C101045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methemoglobinemia","termid":"MONDO:0001117"},{"relation_name":"is_a","term_name":"acquired hemoglobinopathy","termid":"MONDO:0044349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"drug-induced methemoglobinemia","secondary_identifiers":["GARD:21930","MEDGEN:632786","Orphanet:464453","UMLS:C0472781","icd11.foundation:746336827","SCTID:191390009"],"synonyms":[{"name":"acquired methemoglobinemia","type":"broad"},{"name":"drug induced methemoglobinemia","type":"exact"}],"termid":"MONDO:0018740","xrefs":{"Monarch":{"xref_id":"0018740"}}}


id: GO:0045818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycogen catabolic process","termid":"GO:0005981"},{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of glycogen metabolic process","termid":"GO:0070874"},{"relation_name":"negatively_regulates","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycogen catabolic process","synonyms":[{"name":"down regulation of glycogen catabolic process","type":"exact"},{"name":"down-regulation of glycogen catabolic process","type":"exact"},{"name":"downregulation of glycogen catabolic process","type":"exact"},{"name":"inhibition of glycogen catabolic process","type":"narrow"},{"name":"negative regulation of glycogen breakdown","type":"exact"},{"name":"negative regulation of glycogen catabolism","type":"exact"},{"name":"negative regulation of glycogen degradation","type":"exact"},{"name":"negative regulation of glycogenolysis","type":"exact"}],"termid":"GO:0045818"}


id: MONDO:0100510
data:
  {"annotated_genes":["SJAG_03864","SJAG_00851","SJAG_00183","SJAG_00084","SJAG_03475","SJAG_02016","SJAG_04369","SJAG_03423","SJAG_01608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010075"},{"annotations":[87949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032724"},{"annotations":[87494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011335"},{"annotations":[88384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010275"},{"annotations":[87897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958006"},{"annotations":[88615,88616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032885"},{"annotations":[87127,87128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019666"}]},"cv_name":"mondo","definition":"An osteochondrodysplasia that results in abnormalities of bone growth in the vertebral column, epiphysis, and metaphysis.","definition_xrefs":["DOID:0080027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00084":null,"SJAG_00183":null,"SJAG_00851":null,"SJAG_01608":null,"SJAG_02016":null,"SJAG_03423":null,"SJAG_03475":null,"SJAG_03864":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:609408","UMLS:C0432211","SCTID:254062008"],"synonyms":[{"name":"SEMD","type":"exact"},{"name":"spondylo-epi-(meta)-physeal dysplasia","type":"exact"}],"termid":"MONDO:0100510","terms_by_termid":{"MONDO:0010075":null,"MONDO:0010275":null,"MONDO:0011335":null,"MONDO:0019666":null,"MONDO:0032724":null,"MONDO:0032885":null,"MONDO:0958006":null},"xrefs":{"Monarch":{"xref_id":"0100510"}}}


id: PBO:0085211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxysterol-binding phosphatidylserine transferase; part of family with seven members in S. cerevisiae; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; OSH7 has a paralog, OSH6, that arose from the whole genome duplication","termid":"PBO:0085211"}


id: FYPO:0001131
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin","termid":"FYPO:0004718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_01050"],"name":"abnormal protein localization to heterochromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to heterochromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001131","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: MONDO:0019524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Bartter syndrome characterized by maternal polyhydramnios, premature delivery, salt loss, polyuria and sensorineural deafness, associated with hypokalemic and hypochloremic metabolic alkalosis, increased levels of plasma renin and aldosterone, and low to normal blood pressure. Urinary calcium excretion rates are variable, and nephrocalcinosis is typically absent.","definition_xrefs":["Orphanet:89938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome","termid":"MONDO:0015231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter syndrome type 4","secondary_identifiers":["GARD:10508","icd11.foundation:959024909","MEDGEN:824706","SCTID:700112007","UMLS:C3838860"],"synonyms":[{"name":"Bartter syndrome type 4","type":"exact"},{"name":"Bartter syndrome type IV","type":"exact"},{"name":"Bartter syndrome with sensorineural deafness","type":"exact"}],"termid":"MONDO:0019524","xrefs":{"Monarch":{"xref_id":"0019524"}}}


id: PATO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc","definition_xrefs":["PATOC:MH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lemon-shaped","termid":"PATO:0002345"}


id: MONDO:0007450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary central diabetes insipidus is a rare genetic subtype of central diabetes insipidus (CDI) characterized by polyuria and polydipsia due to a deficiency in vasopressin (AVP) synthesis.","definition_xrefs":["Orphanet:30925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"pituitary gland disorder","termid":"MONDO:0003381"},{"relation_name":"is_a","term_name":"diabetes insipidus","termid":"MONDO:0004782"},{"relation_name":"is_a","term_name":"central diabetes insipidus","termid":"MONDO:0015790"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0000426"],"is_obsolete":false,"name":"neurohypophyseal diabetes insipidus","secondary_identifiers":["OMIM:125700","DOID:12388","GARD:16629","MEDGEN:574999","UMLS:C0342394","icd11.foundation:97299603","SCTID:45369008","NANDO:2201050","NCIT:C84933"],"synonyms":[{"name":"ADH deficiency","type":"exact"},{"name":"AVP deficiency","type":"exact"},{"name":"Arginine vasopressin deficiency","type":"exact"},{"name":"antidiuretic hormone deficiency","type":"exact"},{"name":"diabetes insipidus of pituitary gland","type":"exact"},{"name":"diabetes insipidus, cranial type","type":"related"},{"name":"diabetes insipidus, neurohypophyseal","type":"related"},{"name":"diabetes insipidus, primary central","type":"related"},{"name":"hereditary CDI","type":"exact"},{"name":"hereditary central diabetes insipidus","type":"related"},{"name":"hereditary neurogenic diabetes insipidus","type":"exact"},{"name":"neurogenic diabetes insipidus","type":"related"},{"name":"pituitary diabetes insipidus","type":"exact"},{"name":"pituitary gland diabetes insipidus","type":"exact"},{"name":"vasopressin defective diabetes insipidus","type":"exact"},{"name":"vasopressin deficiency","type":"exact"}],"termid":"MONDO:0007450","xrefs":{"Monarch":{"xref_id":"0007450"}}}


id: FYPO:0000573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal shmoo formation","synonyms":[{"name":"normal conjugation tube formation","type":"exact"},{"name":"normal mating projection assembly","type":"exact"},{"name":"normal mating projection formation","type":"exact"},{"name":"normal shmoo assembly","type":"exact"},{"name":"shmoo formation: normal","type":"related"}],"termid":"FYPO:0000573"}


