# terms

id: PBO:0074991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-2","termid":"PBO:0074991"}


id: FYPO:0004107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G2 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during mitotic G2 phase","synonyms":[{"name":"normal protein accumulation during mitotic G2 phase","type":"related"},{"name":"normal protein level during G2 phase of mitotic cell cycle","type":"related"},{"name":"normal protein level during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004107"}


id: GO:0032902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of nerve growth factor (NGF) due to biosynthesis or secretion by cells in a neuron's target field, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:ecd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin production","termid":"GO:0032898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nerve growth factor production","synonyms":[{"name":"NGF production","type":"exact"},{"name":"beta-nerve growth factor production","type":"exact"}],"termid":"GO:0032902"}


id: SO:0001570
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby a new splice site is created due to the activation of a new acceptor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptic_splice_site_variant","termid":"SO:0001569"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_acceptor","synonyms":[{"name":"cryptic splice acceptor","type":"exact"}],"termid":"SO:0001570"}


id: MONDO:0010474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia with linear skin defects syndrome in which the cause of the disease is a mutation in the COX7B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear skin defects with multiple congenital anomalies","termid":"MONDO:0010672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"linear skin defects with multiple congenital anomalies 2","secondary_identifiers":["UMLS:C3550921","OMIM:300887","GARD:15272","MEDGEN:763835","DOID:0111877"],"synonyms":[{"name":"COX7B microphthalmia with linear skin defects syndrome","type":"exact"},{"name":"LSDMCA2","type":"related"},{"name":"aplasia cutis congenita, Reticulolinear, with microcephaly, Facial Dysmorphism, and Other congenital anomalies","type":"related"},{"name":"linear skin defects with multiple congenital anomalies 2","type":"exact"},{"name":"linear skin defects with multiple congenital anomalies 2, X-linked dominant","type":"exact"},{"name":"linear skin defects with multiple congenital anomalies type 2","type":"exact"},{"name":"microphthalmia with linear skin defects syndrome caused by mutation in COX7B","type":"exact"}],"termid":"MONDO:0010474","xrefs":{"Monarch":{"xref_id":"0010474"}}}


id: GO:0052776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway resulting in the breakdown of chitin into fructose 6-phosphate, via glucosamine; acetate is also produced during the process.","definition_xrefs":["GOC:bf","MetaCyc:PWY-6855","PMID:16736587","GOC:mengo_curators","PMID:16232910","PMID:15136574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin catabolic process","termid":"GO:0006032"},{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"chitin catabolic process to fructose 6-phosphate via glucosamine","synonyms":[{"name":"diacetylchitobiose catabolic process to glucosamine and acetate","type":"exact"}],"termid":"GO:0052776"}


id: GO:0001769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed orientation of B cell signaling molecules and associated membrane rafts towards a chemokine gradient of a contact point with an antigen displaying cell.","definition_xrefs":["PMID:9692889","PMID:12615889","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of lymphocyte polarity","termid":"GO:0001767"},{"relation_name":"part_of","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of B cell polarity","synonyms":[{"name":"B cell polarization","type":"exact"},{"name":"B lymphocyte polarization","type":"exact"},{"name":"B-cell polarization","type":"exact"},{"name":"establishment of B lymphocyte polarity","type":"exact"},{"name":"establishment of B-cell polarity","type":"exact"},{"name":"establishment of B-lymphocyte polarity","type":"exact"}],"termid":"GO:0001769"}


id: MONDO:0006118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breast fibrocystic change characterized by the prominence of fibrotic changes in the parenchyma.","definition_xrefs":["NCIT:C3660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"non-proliferative fibrocystic change of the breast","termid":"MONDO:0003724"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast fibrosis","secondary_identifiers":["EFO:1000145","ICD9:610.3","SCTID:29070004","ICD10CM:N60.3","MEDGEN:57627","UMLS:C0156318","DOID:10353"],"synonyms":[{"name":"breast fibrosclerosis","type":"exact"},{"name":"breast fibrosis","type":"exact"},{"name":"fibrosclerosis of breast","type":"exact"},{"name":"fibrosclerosis of the breast","type":"exact"},{"name":"fibrosis of breast","type":"exact"},{"name":"fibrosis of the breast","type":"exact"}],"termid":"MONDO:0006118","xrefs":{"Monarch":{"xref_id":"0006118"}}}


id: MONDO:0014297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the PDE6D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 22","secondary_identifiers":["DOID:0110991","GARD:15999","MEDGEN:816608","UMLS:C3810278","OMIM:615665"],"synonyms":[{"name":"JBTS22","type":"exact"},{"name":"Joubert syndrome 22","type":"exact"},{"name":"Joubert syndrome caused by mutation in PDE6D","type":"exact"},{"name":"Joubert syndrome type 22","type":"exact"},{"name":"PDE6D Joubert syndrome","type":"exact"}],"termid":"MONDO:0014297","xrefs":{"Monarch":{"xref_id":"0014297"}}}


id: GO:0070151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling histidine to histidyl-tRNA in a mitochondrion, catalyzed by histidyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histidyl-tRNA aminoacylation","termid":"GO:0006427"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399","GO:0006520","GO:0140053"],"is_obsolete":false,"name":"mitochondrial histidyl-tRNA aminoacylation","termid":"GO:0070151"}


id: GO:0016300
data:
  {"annotated_genes":["SJAG_04736","SJAG_02042","SJAG_03367"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106335"},{"annotations":[68755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030697"},{"annotations":[64509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141101"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from a donor to a uracil residue in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02042":null,"SJAG_03367":null,"SJAG_04736":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0140098","GO:0140101","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"tRNA (uridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0016431"],"synonyms":[{"name":"tRNA (uracil) methyltransferase activity","type":"exact"}],"termid":"GO:0016300","terms_by_termid":{"GO:0030697":null,"GO:0106335":null,"GO:0141101":null}}


id: PBO:0065194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF4B pseudogene 1","termid":"PBO:0065194"}


id: GO:0023026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II major histocompatibility complex.","definition_xrefs":["GOC:vw","GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex binding","termid":"GO:0023023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class II protein complex binding","termid":"GO:0023026"}


id: PBO:0054486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1886","termid":"PBO:0054486"}


id: PBO:0084610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YGL210W-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YGL211W","termid":"PBO:0084610"}


id: MONDO:0007563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epistaxis, hereditary (obsolete MONDO:0007563)","termid":"MONDO:0007563","xrefs":{"Monarch":{"xref_id":"0007563"}}}


id: GO:0102485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dATP + 2 H2O = dAMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dATP phosphohydrolase activity (obsolete GO:0102485)","termid":"GO:0102485"}


id: GO:1902924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(hydroxyalkanoate) from glucose.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:24425304","GO_REF:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) biosynthetic process","termid":"GO:1901441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) biosynthetic process from glucose","synonyms":[{"name":"poly(hydroxyalkanoate) anabolism from glucose","type":"exact"},{"name":"poly(hydroxyalkanoate) biosynthesis from glucose","type":"exact"},{"name":"poly(hydroxyalkanoate) formation from glucose","type":"exact"},{"name":"poly(hydroxyalkanoate) synthesis from glucose","type":"exact"}],"termid":"GO:1902924"}


id: PBO:0066438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"resistin like beta","termid":"PBO:0066438"}


id: MONDO:0011807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus with hemolytic anemia, susceptibility to, 1","secondary_identifiers":["OMIM:607279","MEDGEN:375913","UMLS:C1846533"],"synonyms":[{"name":"SLEH1","type":"exact"},{"name":"systemic lupus erythematosus with hemolytic anaemia","type":"exact"},{"name":"systemic lupus erythematosus with hemolytic anemia","type":"exact"},{"name":"systemic lupus erythematosus with hemolytic anemia, susceptibility to, 1","type":"exact"},{"name":"systemic lupus erythematosus, hemolytic Anemia-related","type":"exact"}],"termid":"MONDO:0011807","xrefs":{"Monarch":{"xref_id":"0011807"}}}


id: PBO:0072034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 4","termid":"PBO:0072034"}


id: PBO:0061838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid growth factor receptor like 1","termid":"PBO:0061838"}


id: GO:0033336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the caudal fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin development","termid":"GO:0033338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal fin development","termid":"GO:0033336"}


id: PBO:0053246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX1 divergent transcript","termid":"PBO:0053246"}


id: FYPO:0004853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of an RNA in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"RNA localization phenotype","synonyms":[{"name":"RNA localisation phenotype","type":"exact"},{"name":"fission yeast RNA localization phenotype","type":"exact"}],"termid":"FYPO:0004853"}


id: FYPO:0007922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cysteine  above normal physiological concentrations. Cells stop growing (and may die) at a concentration of cysteine that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to cysteine","synonyms":[{"name":"sensitive to cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0007922"}


id: GO:0102496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A5 + O2 + 2-oxoglutarate = gibberellin A6 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete GA5 2,3 epoxidase activity (obsolete GO:0102496)","termid":"GO:0102496"}


id: PBO:0066690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of microtubule dynamics 1","termid":"PBO:0066690"}


id: PBO:0053562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 572","termid":"PBO:0053562"}


id: PBO:0062358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily R member 2 pseudogene","termid":"PBO:0062358"}


id: GO:0047341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-L-fucose 1-phosphate + GTP + H+ = diphosphate + GDP-beta-L-fucose.","definition_xrefs":["RHEA:13549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"fucose-1-phosphate guanylyltransferase activity","secondary_identifiers":["EC:2.7.7.30","KEGG_REACTION:R01951","MetaCyc:2.7.7.30-RXN","Reactome:R-HSA-6787533"],"synonyms":[{"name":"GDP fucose pyrophosphorylase activity","type":"related"},{"name":"GDP-L-fucose pyrophosphorylase activity","type":"related"},{"name":"GDP-fucose diphosphorylase activity","type":"related"},{"name":"GDP-fucose pyrophosphorylase activity","type":"related"},{"name":"GTP:L-fucose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:beta-L-fucose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:fucose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"guanosine diphosphate L-fucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0047341"}


id: FYPO:0007407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during phosphate starvation measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah","PMID:32499400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of phosphate starvation gene mRNA during vegetative growth","synonyms":[{"name":"increased level of cellular response to phosphate starvation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of phosphate starvation gene RNA during vegetative growth","type":"exact"},{"name":"increased level of phosphate starvation gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of phosphate starvation gene transcripts during vegetative growth","type":"exact"},{"name":"increased phosphate starvation gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0007407"}


id: MONDO:0800314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum-Cockayne syndrome complex","termid":"MONDO:0016354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"xeroderma pigmentosum, type G/Cockayne syndrome","secondary_identifiers":["UMLS:C1968561","MEDGEN:409618"],"synonyms":[{"name":"XPG/CS","type":"exact"}],"termid":"MONDO:0800314","xrefs":{"Monarch":{"xref_id":"0800314"}}}


id: PBO:0063996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 30","termid":"PBO:0063996"}


id: GO:0060448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lung bud bifurcates.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichotomous subdivision of an epithelial terminal unit","termid":"GO:0060600"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dichotomous subdivision of terminal units involved in lung branching","synonyms":[{"name":"bud bifurcation involved in lung branching","type":"exact"}],"termid":"GO:0060448"}


id: PBO:0000125
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sim Four and mal Two Associated protein","termid":"PBO:0000125"}


id: PBO:0076614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 32","termid":"PBO:0076614"}


id: PBO:0059060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1B","termid":"PBO:0059060"}


id: PBO:0050251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 29","termid":"PBO:0050251"}


id: GO:0060940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an epicardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will mature into a cardiac fibroblast.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell development","termid":"GO:0060939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition involved in cardiac fibroblast development","termid":"GO:0060940"}


id: MONDO:0016240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemimelia is a limb malformation characterized by the absence or gross shortening of the lower portion of one or more of the limbs. The condition is designated according to which bone of the distal arm or leg is absent or defective and includes fibular, radial, tibial, or ulnar hemimelia. Hemimelia ranges in severity.","definition_xrefs":["Orphanet:2130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hemimelia","secondary_identifiers":["GARD:18761","NCIT:C34674","MedDRA:10019464","SCTID:33076008","UMLS:C0018987","MEDGEN:9194"],"synonyms":[{"name":"longitudinal meromelia","type":"exact"}],"termid":"MONDO:0016240","xrefs":{"Monarch":{"xref_id":"0016240"}}}


id: PBO:0004645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb2","termid":"PBO:0004645"}


id: PBO:0065729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 2A pseudogene 1","termid":"PBO:0065729"}


id: PBO:0087008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribokinase, phosphorylates ribose to ribose-5-phosphate; required for recycling ribose during nucleotide metabolism","termid":"PBO:0087008"}


id: GO:1903201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of oxidative stress-induced cell death.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oxidative stress-induced cell death (obsolete GO:1903201)","synonyms":[{"name":"regulation of cell death in response to oxidative stress","type":"exact"}],"termid":"GO:1903201"}


id: PBO:0113335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may have been brought into S. cerevisiae genome via horizontal transfer mediated by Ty1 retrotransposition","termid":"PBO:0113335"}


id: PATO:0001146
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001146 resistance value (obsolete PATO:0001146)","termid":"PATO:0001146"}


id: SO:0001859
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CCCCTC, bound by the PKA-responsive zinc finger transcription factor Rst2.","definition_xrefs":["PMID:11739717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STREP_motif","synonyms":[{"name":"STREP motif","type":"related"},{"name":"stress-starvation response element of Schizosaccharomyces pombe","type":"exact"}],"termid":"SO:0001859"}


id: PBO:0001917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoric ester hydrolase Ssu72 (predicted)","termid":"PBO:0001917"}


id: MONDO:0020106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemolytic anemia due to a disorder of glycolytic enzymes (obsolete MONDO:0020106)","secondary_identifiers":["Orphanet:98372"],"termid":"MONDO:0020106","xrefs":{"Monarch":{"xref_id":"0020106"}}}


id: GO:1904941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["GOC:bc","GOC:TermGenie","GOC:BHF","GO_REF:0000059","GOC:BHF_miRNA","PMID:23575307"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904941)","synonyms":[{"name":"activation of DNA nucleotidylexotransferase activity","type":"narrow"},{"name":"activation of TdT","type":"related"},{"name":"activation of addase activity","type":"narrow"},{"name":"activation of deoxynucleotidyl terminal transferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic acid nucleotidyltransferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic nucleotidyltransferase activity","type":"narrow"},{"name":"activation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"narrow"},{"name":"activation of terminal addition enzyme activity","type":"related"},{"name":"activation of terminal deoxynucleotide transferase activity","type":"narrow"},{"name":"activation of terminal deoxynucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal deoxyribonucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal transferase activity","type":"narrow"},{"name":"positive regulation of TdT","type":"related"},{"name":"positive regulation of addase activity","type":"exact"},{"name":"positive regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"positive regulation of terminal addition enzyme activity","type":"related"},{"name":"positive regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"positive regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal transferase activity","type":"exact"},{"name":"up regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of TdT","type":"related"},{"name":"up regulation of addase activity","type":"exact"},{"name":"up regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of terminal addition enzyme activity","type":"related"},{"name":"up regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal transferase activity","type":"exact"},{"name":"up-regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of TdT","type":"related"},{"name":"up-regulation of addase activity","type":"exact"},{"name":"up-regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of terminal addition enzyme activity","type":"related"},{"name":"up-regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up-regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal transferase activity","type":"exact"},{"name":"upregulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of TdT","type":"related"},{"name":"upregulation of addase activity","type":"exact"},{"name":"upregulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of terminal addition enzyme activity","type":"related"},{"name":"upregulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"upregulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904941"}


id: PBO:0056728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm posterior bHLH transcription factor 1","termid":"PBO:0056728"}


id: MONDO:0018055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pediatric hepatocellular carcinoma (pediatric HCC) is a rare, aggressive, malignant hepatic tumor that develops mainly in children over 10 years of age.","definition_xrefs":["Orphanet:33402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pediatric hepatocellular carcinoma","secondary_identifiers":["MEDGEN:75999","GARD:9331","UMLS:C0279606","DOID:0070322","NCIT:C7955"],"synonyms":[{"name":"Paediatric carcinoma of the liver cell","type":"exact"},{"name":"Pediatric carcinoma of the liver cell","type":"exact"},{"name":"childhood carcinoma of liver cell","type":"related"},{"name":"childhood carcinoma of the liver cell","type":"exact"},{"name":"childhood hepatocellular carcinoma","type":"exact"},{"name":"childhood hepatoma","type":"related"},{"name":"childhood liver cell carcinoma","type":"related"},{"name":"childhood-onset HCC","type":"exact"},{"name":"childhood-onset hepatocellular carcinoma","type":"exact"},{"name":"hepatocellular cancer","type":"broad"},{"name":"paediatric HCC","type":"exact"},{"name":"paediatric carcinoma of liver cell","type":"related"},{"name":"paediatric hepatoma","type":"related"},{"name":"paediatric liver cell carcinoma","type":"related"},{"name":"pediatric HCC","type":"exact"},{"name":"pediatric carcinoma of liver cell","type":"related"},{"name":"pediatric hepatoma","type":"related"},{"name":"pediatric liver cell carcinoma","type":"related"}],"termid":"MONDO:0018055","xrefs":{"Monarch":{"xref_id":"0018055"}}}


id: PBO:0057038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR130A host gene","termid":"PBO:0057038"}


id: MONDO:0700084
data:
  {"annotated_genes":["SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[87754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[87759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"}]},"cv_name":"mondo","definition":"Any myopathy in which the cause of the disease is a variation in the GMPPB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0024322","MONDO:0002320","MONDO:0005066"],"is_obsolete":false,"name":"myopathy caused by variation in GMPPB","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"GMPPB-related myopathy","type":"exact"},{"name":"myopathy caused by mutation in GMPPB","type":"exact"}],"termid":"MONDO:0700084","terms_by_termid":{"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null},"xrefs":{"Monarch":{"xref_id":"0700084"}}}


id: GO:0140236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the presynapse.","definition_xrefs":["PMID:27321671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at synapse","termid":"GO:0140241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translation at presynapse","termid":"GO:0140236"}


id: _global:paralogous_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"homologous_to","termid":"_global:homologous_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous_to","termid":"_global:paralogous_to"}


id: GO:0004242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-mitochondrial processing peptidase (obsolete GO:0004242)","synonyms":[{"name":"beta-MPP","type":"exact"},{"name":"beta-mitochondrial processing peptidase","type":"exact"}],"termid":"GO:0004242"}


id: PBO:0067934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 236","termid":"PBO:0067934"}


id: PBO:0085379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP binding cassette (ABC) transporter; multidrug transporter and general stress response factor implicated in cellular detoxification; regulated by Pdr1p, Pdr3p and Pdr8p; promoter contains a PDR responsive element; PDR15 has a paralog, PDR5, that arose from the whole genome duplication","termid":"PBO:0085379"}


id: GO:0097243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a flavonoid, a compound containing two or more aromatic rings, each bearing at least one aromatic hydroxyl and connected with a carbon bridge.","definition_xrefs":["PMID:20599706","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"flavonoid binding","termid":"GO:0097243"}


id: GO:0006569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process","termid":"GO:1902222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-tryptophan catabolic process","secondary_identifiers":["Reactome:R-HSA-71240"],"synonyms":[{"name":"tryptophan breakdown","type":"exact"},{"name":"tryptophan catabolic process","type":"related"},{"name":"tryptophan catabolic process, using tryptophanase","type":"narrow"},{"name":"tryptophan catabolism","type":"exact"},{"name":"tryptophan catabolism, using tryptophanase","type":"narrow"},{"name":"tryptophan degradation","type":"exact"}],"termid":"GO:0006569"}


id: PBO:0060769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B5","termid":"PBO:0060769"}


id: PBO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 34","termid":"PBO:0071896"}


id: MONDO:1010792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited syndrome characterized by hypotrichosis (sparseness of hair), hypo- or an-hidrosis (reduced ability to sweat), and hypodontia (congenital absence of teeth) in cattle due to a variation in the EDAR gene.","definition_xrefs":["PMID:28904385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anhidrotic ectodermal dysplasia EDAR-related, cattle","secondary_identifiers":["OMIA:002128-9913"],"termid":"MONDO:1010792","xrefs":{"Monarch":{"xref_id":"1010792"}}}


id: GO:1901629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of presynaptic membrane organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"presynaptic membrane organization","termid":"GO:0097090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of presynaptic membrane organization","synonyms":[{"name":"regulation of pre-synaptic membrane organization","type":"exact"},{"name":"regulation of presynaptic membrane organisation","type":"exact"}],"termid":"GO:1901629"}


id: FYPO:0000570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mating projection assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased shmoo formation","synonyms":[{"name":"decreased conjugation tube formation","type":"exact"},{"name":"decreased mating projection assembly","type":"exact"},{"name":"decreased mating projection formation","type":"exact"},{"name":"decreased shmoo assembly","type":"exact"},{"name":"reduced shmoo formation","type":"exact"},{"name":"shmoo formation: decreased","type":"related"}],"termid":"FYPO:0000570"}


id: MONDO:0007066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine triphosphatase deficiency, anemia due to","secondary_identifiers":["OMIM:102800","MEDGEN:350115","Orphanet:1044","UMLS:C1863225","GARD:548","SCTID:725057008","MESH:C566311"],"synonyms":[{"name":"adenosine triphosphatase deficiency anaemia","type":"related"},{"name":"adenosine triphosphatase deficiency anemia","type":"related"},{"name":"adenosine triphosphatase deficiency, anemia due to","type":"exact"},{"name":"anaemia due to adenosine triphosphatase deficiency","type":"related"},{"name":"anemia due to adenosine triphosphatase deficiency","type":"related"}],"termid":"MONDO:0007066","xrefs":{"Monarch":{"xref_id":"0007066"}}}


id: PBO:0052449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF3 antisense RNA 1","termid":"PBO:0052449"}


id: FYPO:0006156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium arsenite (AsNaO2). Cells stop growing (and may die) at a concentration of sodium arsenite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to sodium arsenite","synonyms":[{"name":"hypersensitive to sodium arsenite","type":"exact"},{"name":"sensitive to AsNaO2","type":"exact"},{"name":"sensitive to sodium arsenite during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium arsenite during vegetative growth","type":"exact"}],"termid":"FYPO:0006156"}


id: GO:1901254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intracellular transport of viral material.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport of viral material","termid":"GO:1901252"},{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"positively_regulates","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular transport of viral material","synonyms":[{"name":"activation of egress of virus within host cell","type":"narrow"},{"name":"activation of movement of virus within host cell","type":"exact"},{"name":"activation of viral egress","type":"exact"},{"name":"positive regulation of egress of virus within host cell","type":"related"},{"name":"positive regulation of movement of virus within host cell","type":"exact"},{"name":"positive regulation of viral egress","type":"exact"},{"name":"up regulation of egress of virus within host cell","type":"exact"},{"name":"up regulation of movement of virus within host cell","type":"exact"},{"name":"up regulation of viral egress","type":"exact"},{"name":"up-regulation of egress of virus within host cell","type":"exact"},{"name":"up-regulation of movement of virus within host cell","type":"exact"},{"name":"up-regulation of viral egress","type":"exact"},{"name":"upregulation of egress of virus within host cell","type":"exact"},{"name":"upregulation of movement of virus within host cell","type":"exact"},{"name":"upregulation of viral egress","type":"exact"}],"termid":"GO:1901254"}


id: GO:1902849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuronal signal transduction.","definition_xrefs":["GO_REF:0000058","GOC:sjp","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of neuronal signal transduction","termid":"GO:1902847"},{"relation_name":"positively_regulates","term_name":"neuronal signal transduction","termid":"GO:0023041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuronal signal transduction","synonyms":[{"name":"activation of neuronal signal transduction","type":"narrow"},{"name":"up regulation of neuronal signal transduction","type":"exact"},{"name":"up-regulation of neuronal signal transduction","type":"exact"},{"name":"upregulation of neuronal signal transduction","type":"exact"}],"termid":"GO:1902849"}


id: GO:1900586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arugosin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"arugosin metabolic process","termid":"GO:1900585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"arugosin catabolic process","synonyms":[{"name":"arugosin breakdown","type":"exact"},{"name":"arugosin catabolism","type":"exact"},{"name":"arugosin degradation","type":"exact"}],"termid":"GO:1900586"}


id: PBO:0070378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 4","termid":"PBO:0070378"}


id: GO:0042943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-amino acids from one side of a membrane to the other. D-amino acids are the D-enantiomers of amino acids.","definition_xrefs":["GOC:mah","GOC:mtg_transport","GOC:jl","GOC:jsg","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"D-amino acid transmembrane transporter activity","synonyms":[{"name":"D-amino acid transporter activity","type":"broad"}],"termid":"GO:0042943"}


id: PBO:0062360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily T member 1","termid":"PBO:0062360"}


id: MONDO:0008929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cataract-intellectual disability-hypogonadism syndrome (obsolete MONDO:0008929)","termid":"MONDO:0008929","xrefs":{"Monarch":{"xref_id":"0008929"}}}


id: GO:0097563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the caudal and posteriolateral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["PMID:16607022","GOC:giardia","ISBN:9780124260207","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left middle basal body pair","termid":"GO:0097563"}


id: MONDO:0025159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, clinically mild, infectious pneumonia of pigs caused by mycoplasma hyopneumoniae. Ninety percent of swine herds worldwide are infected with this economically costly disease that primarily affects animals aged two to six months old. The disease can be associated with porcine respiratory disease complex. pasteurella multocida is often found as a secondary infection.","definition_xrefs":["MESH:D045729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"bacterial pneumonia, non-human animal","termid":"MONDO:0700111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia of swine, mycoplasmal","synonyms":[{"name":"Mycoplasma pneumonia of pigs","type":"related"},{"name":"Mycoplasma pneumonia of swine","type":"related"},{"name":"Mycoplasmal pneumonia of swine","type":"related"},{"name":"enzootic pneumonia of pigs","type":"related"},{"name":"enzootic pneumonia of swine","type":"related"},{"name":"pneumonia of swine, enzootic","type":"related"},{"name":"swine Mycoplasma pneumonia","type":"related"},{"name":"swine Mycoplasmal pneumonia","type":"related"},{"name":"swine enzootic pneumonia","type":"related"}],"termid":"MONDO:0025159","xrefs":{"Monarch":{"xref_id":"0025159"}}}


id: PBO:0091311
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Cut Nine","termid":"PBO:0091311"}


id: PR:Q9URM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2G5.05 gene.","definition_xrefs":["UniProtKB:Q9URM2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.05","synonyms":[{"name":"Spom972h-SPBC2G5.05","type":"exact"},{"name":"TK (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URM2"}


id: GO:0015649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 2-keto-3-deoxygluconate(out) + H+(out) = 2-keto-3-deoxygluconate(in) + H+(in).","definition_xrefs":["RHEA:29943","TC:2.A.10.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"2-keto-3-deoxygluconate:proton symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-113"],"synonyms":[{"name":"2-keto-3-deoxygluconate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015649"}


id: PBO:0057330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520e","termid":"PBO:0057330"}


id: PR:G2TRJ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1093.07 gene.","definition_xrefs":["UniProtKB:G2TRJ6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1093.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.07","synonyms":[{"name":"Spom972h-SPAC1093.07","type":"exact"}],"termid":"PR:G2TRJ6"}


id: GO:0044435
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a plastid, a member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid part (obsolete GO:0044435)","termid":"GO:0044435"}


id: GO:0099079
data:
  {"annotated_genes":["SJAG_02566","SJAG_03088","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100764,103640,107057],"is_not":false,"summary":null,"term":"GO:0099079"}]},"cv_name":"cellular_component","definition":"An amorphous cytoskeletal structure consisting of aggregated actin filaments and associated proteins (including fibrin and capping protein) in which there is little or no actin filament turnover. In yeast (S. pombe and S. cerevisiae) these are found only in quiescent cells and are thought to serve as a reserve store of actin.","definition_xrefs":["PMID:16914523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02566":null,"SJAG_02700":null,"SJAG_03088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099079","terms_by_termid":{"GO:0099079":null}}


id: PBO:0039462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD11 pseudogene 2","termid":"PBO:0039462"}


id: PBO:0066080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 8","termid":"PBO:0066080"}


id: PBO:0091888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M20 protein involved in glutathione catabolism","termid":"PBO:0091888"}


id: MONDO:0957113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic calcium channel defect","secondary_identifiers":["Orphanet:98740","MEDGEN:1842522","UMLS:C5681686","GARD:19565"],"termid":"MONDO:0957113","xrefs":{"Monarch":{"xref_id":"0957113"}}}


id: MONDO:0035555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial atrioventricular septal defect with ventricular hypoplasia (obsolete MONDO:0035555)","secondary_identifiers":["Orphanet:576232"],"termid":"MONDO:0035555","xrefs":{"Monarch":{"xref_id":"0035555"}}}


id: PBO:0065650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type C associated protein","termid":"PBO:0065650"}


id: MONDO:0016242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemoglobin C disease (HbC) is a hemoglobinopathy characterized by production of abnormal variant hemoglobin known as hemoglobin C, with no or mild clinical manifestations (hemolytic anemia).","definition_xrefs":["Orphanet:2132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemoglobin C disease","secondary_identifiers":["UMLS:C0019021","DOID:2859","NCIT:C34675","NANDO:2200635","MedDRA:10018883","MESH:D006445","MEDGEN:6789","SCTID:51053007","MESH:C531699","ICD9:282.7"],"synonyms":[{"name":"Hb C disease","type":"related"},{"name":"Hb-C disease","type":"exact"}],"termid":"MONDO:0016242","xrefs":{"Monarch":{"xref_id":"0016242"}}}


id: GO:1990596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 4 of the histone.","definition_xrefs":["PMID:20299449"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 deacetylation (obsolete GO:1990596)","termid":"GO:1990596"}


id: GO:0048600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an oocyte.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"oocyte differentiation","termid":"GO:0009994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte fate commitment","termid":"GO:0048600"}


id: FYPO:0002791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small vacuoles during stationary phase","termid":"FYPO:0002789"},{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"},{"relation_name":"is_a","term_name":"small vacuoles during stationary phase","termid":"FYPO:0002789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during stationary phase","synonyms":[{"name":"fragmented vacuoles during stationary phase","type":"related"},{"name":"small vacuoles present in greater numbers during stationary phase","type":"exact"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during stationary phase","type":"exact"}],"termid":"FYPO:0002791"}


id: MONDO:0002983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuromuscular junction disease (obsolete MONDO:0002983)","termid":"MONDO:0002983","xrefs":{"Monarch":{"xref_id":"0002983"}}}


id: GO:0086019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the heart process that regulates cardiac muscle contraction; beginning with the generation of an action potential in the sinoatrial node and ending with regulation of contraction of the myocardium.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in cardiac conduction","synonyms":[{"name":"cell-cell signalling involved in cardiac conduction","type":"exact"}],"termid":"GO:0086019"}


id: PBO:0003876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C/D containing snoRNA Z30","termid":"PBO:0003876"}


id: MONDO:0018789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete COL4A1 or COL4A2-related cerebral small vessel disease with ischemic tendency (obsolete MONDO:0018789)","secondary_identifiers":["Orphanet:477762"],"synonyms":[{"name":"COL4A1 or COL4A2-related cerebral angiopathy with ischemic tendency","type":"exact"}],"termid":"MONDO:0018789","xrefs":{"Monarch":{"xref_id":"0018789"}}}


id: PBO:0045137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 5","termid":"PBO:0045137"}


id: MONDO:0004339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the tuberculum sellae.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sella turcica neoplasm","termid":"MONDO:0002720"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculum sellae meningioma","secondary_identifiers":["MEDGEN:277835","UMLS:C1336829","NCIT:C5284","DOID:7713"],"synonyms":[{"name":"meningioma of the tuberculum sellae","type":"exact"},{"name":"meningioma of tuberculum sellae","type":"exact"},{"name":"sella turcica neoplasm of tuberculum sellae","type":"exact"},{"name":"tuberculum sellae sella turcica neoplasm","type":"exact"}],"termid":"MONDO:0004339","xrefs":{"Monarch":{"xref_id":"0004339"}}}


id: PBO:0014602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, 7SK RNA methyltransferase (predicted)","termid":"PBO:0014602"}


id: PR:Q9Y800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug97 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 97 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.11c","synonyms":[{"name":"Spom972h-mug97","type":"exact"},{"name":"meiotic expression up-regulated protein 33 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y800"}


id: MONDO:0015743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic bilateral vestibulopathy is a rare otorhinolaryngologic disease characterized by dysfunction of both peripheral labyrinths or of the eighth nerves, which presents with persistent unsteadiness of gait (particularly in darkness, during eye closure or under impaired visual conditions, or when standing/walking on uneven, soft or wobbly ground) and oscillopsia associated with head movements. The disease may be progressive, presenting no episodes of vertigo, or sequential, presenting recurrent episodes of vertigo.","definition_xrefs":["Orphanet:171684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic bilateral vestibulopathy","secondary_identifiers":["GARD:20124","MEDGEN:1622940","icd11.foundation:1394072237","SCTID:737580004","UMLS:C4545229"],"termid":"MONDO:0015743","xrefs":{"Monarch":{"xref_id":"0015743"}}}


id: GO:1903419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cortical endoplasmic reticulum.","definition_xrefs":["PMID:25103238","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to endoplasmic reticulum tubular network","termid":"GO:1903420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cortical endoplasmic reticulum","synonyms":[{"name":"protein localisation in cortical endoplasmic reticulum","type":"exact"},{"name":"protein localisation to cortical endoplasmic reticulum","type":"exact"},{"name":"protein localization in cortical endoplasmic reticulum","type":"exact"},{"name":"protein localization to cortical ER","type":"exact"}],"termid":"GO:1903419"}


id: PBO:0064617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 7","termid":"PBO:0064617"}


id: PATO:0000681
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000681 incidence value (obsolete PATO:0000681)","termid":"PATO:0000681"}


id: MONDO:0958335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 1","termid":"MONDO:0019572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"cutis laxa, autosomal recessive, type 1d","secondary_identifiers":["MEDGEN:1857168","UMLS:C5935602","OMIM:620780"],"termid":"MONDO:0958335","xrefs":{"Monarch":{"xref_id":"0958335"}}}


id: MONDO:0042912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schlegelberger-Grote syndrome","secondary_identifiers":["UMLS:C2931273","MEDGEN:419761","MESH:C536635"],"synonyms":[{"name":"Schlegelberger Grote syndrome","type":"related"},{"name":"syndrome with triphalangia of thumbs, thrombasthenia Glanzmann and deafness of internal ear","type":"related"},{"name":"triphalangeal thumbs thrombocytopathy deafness","type":"related"}],"termid":"MONDO:0042912","xrefs":{"Monarch":{"xref_id":"0042912"}}}


id: PBO:0005750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucear export factor Sac3 (predicted)","termid":"PBO:0005750"}


id: GO:0048867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a stem cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:isa_complete","CL:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"stem cell fate commitment","termid":"GO:0048865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell fate determination","termid":"GO:0048867"}


id: GO:2000418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of eosinophil migration","termid":"GO:2000416"},{"relation_name":"positively_regulates","term_name":"eosinophil migration","termid":"GO:0072677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eosinophil migration","termid":"GO:2000418"}


id: GO:0030038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of actin filament bundles in which the filaments are loosely packed (approximately 30-60 nm apart) and arranged with opposing polarities; the loose packing allows myosin (usually myosin-II) to enter the bundle.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"contractile actin filament bundle assembly","termid":"GO:0030038"}


id: MONDO:0006823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex chromosome disorder caused by the presence of an extra X chromosome in the male karyotype. Affected individuals are infertile and have a small penis and testes. They tend to have tall stature and long legs and may have difficulties with speech and language development. Gynecomastia may be present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Klinefelter syndrome","secondary_identifiers":["MEDGEN:44033","MESH:D007713","NANDO:2200386","NCIT:C34752","DOID:1921","EFO:1001006","UMLS:C0022735","MedDRA:10023463","icd11.foundation:1937385304","SCTID:405769009","ICD9:758.7"],"synonyms":[{"name":"47,XXY syndrome","type":"exact"},{"name":"Klinefelter syndrome","type":"exact"},{"name":"Klinefelter's syndrome","type":"exact"},{"name":"Klinefelter's syndrome, XXY","type":"exact"},{"name":"XXY syndrome","type":"exact"},{"name":"XXY syndrome (Klinefelter syndrome)","type":"exact"},{"name":"XXY trisomy","type":"exact"},{"name":"hypogonadotropic hypogonadism","type":"related"}],"termid":"MONDO:0006823","xrefs":{"Monarch":{"xref_id":"0006823"}}}


id: MOD:00905
data:
  {"annotated_genes":["SJAG_00784","SJAG_03032","SJAG_04953","SJAG_03290","SJAG_01970","SJAG_04789","SJAG_02435","SJAG_00096","SJAG_02260","SJAG_01029","SJAG_04125","SJAG_02388","SJAG_04067","SJAG_00827","SJAG_00254","SJAG_00109","SJAG_00288","SJAG_04238","SJAG_02827","SJAG_04553","SJAG_01162","SJAG_01626","SJAG_02504","SJAG_02489","SJAG_02694"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00793"},{"annotations":[82282,82425,82462,82507,82290,82380,82572,82275,82505,82255,82281,82539,82446,82284,82544,82567,82568,82280,82485,82543,82493,82291,82335,82289,82506,82341,82566,82542,82438,82427,82285,82331,82334,82363,82336,82379,82461,82574,82372,82463,82504,82426,82541,82357,82371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00689"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-cysteine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00288":null,"SJAG_00784":null,"SJAG_00827":null,"SJAG_01029":null,"SJAG_01162":null,"SJAG_01626":null,"SJAG_01970":null,"SJAG_02260":null,"SJAG_02388":null,"SJAG_02435":null,"SJAG_02489":null,"SJAG_02504":null,"SJAG_02694":null,"SJAG_02827":null,"SJAG_03032":null,"SJAG_03290":null,"SJAG_04067":null,"SJAG_04125":null,"SJAG_04238":null,"SJAG_04553":null,"SJAG_04789":null,"SJAG_04953":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-cysteine residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"ModCys","type":"exact"}],"termid":"MOD:00905","terms_by_termid":{"MOD:00689":null,"MOD:00793":null}}


id: GO:0060715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chorionic trophoblast cell acquires specialized features of a syncytiotrophoblast of the labyrinthine layer of the placenta.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"},{"relation_name":"part_of","term_name":"labyrinthine layer development","termid":"GO:0060711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"syncytiotrophoblast cell differentiation involved in labyrinthine layer development","termid":"GO:0060715"}


id: MONDO:0012378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary gingival fibromatosis","termid":"MONDO:0016070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, 3","secondary_identifiers":["OMIM:609955","MEDGEN:351261","MESH:C537928","UMLS:C1864960","GARD:9911"],"synonyms":[{"name":"GGF3","type":"related"},{"name":"GINGF3","type":"exact"},{"name":"HGF3","type":"related"},{"name":"fibromatosis gingival, hereditary, 3","type":"related"},{"name":"fibromatosis, gingival, 3","type":"exact"},{"name":"fibromatosis, gingival, hereditary, 3","type":"related"},{"name":"gingival fibromatosis, 3","type":"related"},{"name":"hereditary gingival fibromatosis, 3","type":"related"}],"termid":"MONDO:0012378","xrefs":{"Monarch":{"xref_id":"0012378"}}}


id: PBO:0016892
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AUreobasidin A Resistance","termid":"PBO:0016892"}


id: MONDO:0012942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung cancer","termid":"MONDO:0008903"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer susceptibility 3","secondary_identifiers":["MEDGEN:382615","OMIM:612571","UMLS:C2675497"],"synonyms":[{"name":"LNCR3","type":"exact"},{"name":"adenocarcinoma of lung, susceptibility to","type":"related"},{"name":"lung cancer susceptibility 3","type":"exact"}],"termid":"MONDO:0012942","xrefs":{"Monarch":{"xref_id":"0012942"}}}


id: MONDO:0010289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 72","secondary_identifiers":["UMLS:C1846038","GARD:22671","MEDGEN:375793","OMIM:300271","DOID:0112059","MESH:C564547"],"synonyms":[{"name":"MRX72","type":"related"},{"name":"intellectual developmental disorder, X-linked 72, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 72","type":"exact"},{"name":"intellectual disability, X-linked type 72","type":"exact"},{"name":"mental retardation, X-linked 72","type":"related"},{"name":"mental retardation, X-linked type 72","type":"exact"}],"termid":"MONDO:0010289","xrefs":{"Monarch":{"xref_id":"0010289"}}}


id: PBO:0090781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type","termid":"PBO:0090781"}


id: GO:1990383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of biotin.","definition_xrefs":["PMID:12557275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotin starvation","termid":"GO:1990383"}


id: PBO:0071011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 13","termid":"PBO:0071011"}


id: PBO:0048288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin like peptide","termid":"PBO:0048288"}


id: GO:0097296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of an inactive cysteine-type endopeptidase involved in the apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway (obsolete GO:0097296)","secondary_identifiers":["Reactome:R-HSA-140534"],"synonyms":[{"name":"activation of cysteine-type endopeptidase activity involved in apoptotic signalling pathway","type":"exact"},{"name":"activation of initiator caspase activity","type":"narrow"}],"termid":"GO:0097296"}


id: MONDO:1011259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinitis pigmentosa that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa, non-human animal","termid":"MONDO:1010334"},{"relation_name":"is_a","term_name":"retinal degeneration, cattle","termid":"MONDO:1011247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa, cattle","secondary_identifiers":["OMIA:001413-9913"],"termid":"MONDO:1011259","xrefs":{"Monarch":{"xref_id":"1011259"}}}


id: MONDO:0012813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that has material basis in variation in the chromosome region 4q32-q34.","definition_xrefs":["PMID:11381043","DOID:0110378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 29","secondary_identifiers":["MESH:C567403","UMLS:C2677325","ICD10CM:H35.5","OMIM:612165","MEDGEN:393710","GARD:10378"],"synonyms":[{"name":"RP 29","type":"related"},{"name":"RP29","type":"exact"},{"name":"retinitis pigmentosa 29","type":"exact"},{"name":"retinitis pigmentosa type 29","type":"exact"}],"termid":"MONDO:0012813","xrefs":{"Monarch":{"xref_id":"0012813"}}}


id: MONDO:0002534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm that arises from the fallopian tube. It is characterized by the presence of fibrovascular stalks lined by serous epithelial cells.","definition_xrefs":["NCIT:C40112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube benign neoplasm","termid":"MONDO:0000645"},{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube papilloma","secondary_identifiers":["DOID:3173","MEDGEN:275874","UMLS:C1517123"],"synonyms":[{"name":"fallopian tube papilloma","type":"exact"},{"name":"fallopian tube serous papilloma","type":"exact"}],"termid":"MONDO:0002534","xrefs":{"Monarch":{"xref_id":"0002534"}}}


id: PBO:0043079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 9 subunit","termid":"PBO:0043079"}


id: PBO:0089802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane vitamin H transmembrane transporter Vht1","termid":"PBO:0089802"}


id: PBO:0059076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 3 pseudogene 2","termid":"PBO:0059076"}


id: GO:0050579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-deoxysarpagine + NADP+ = H+ + NADPH + vellosimine.","definition_xrefs":["EC:1.1.1.273","RHEA:20029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"vellosimine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05827","MetaCyc:1.1.1.273-RXN"],"synonyms":[{"name":"10-deoxysarpagine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050579"}


id: PR:O94656
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.05","synonyms":[{"name":"Spom972h-atg16","type":"exact"}],"termid":"PR:O94656"}


id: PBO:0046814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XIII B chain","termid":"PBO:0046814"}


id: MONDO:0005679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute disease of cattle caused by the bovine viral diarrhea viruses (diarrhea viruses, bovine viral). Often mouth ulcerations are the only sign but fever, diarrhea, drop in milk yield, and loss of appetite are also seen. Severity of clinical disease varies and is strain dependent. Outbreaks are characterized by low morbidity and high mortality.","definition_xrefs":["MESH:D001912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"pestivirus infectious disease, non-human animal","termid":"MONDO:0700203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bovine virus diarrhea-mucosal disease","secondary_identifiers":["DOID:5115","MESH:D030243"],"synonyms":[{"name":"bovine hemorrhagic syndrome","type":"exact"},{"name":"hemorrhagic syndrome, bovine","type":"exact"}],"termid":"MONDO:0005679","xrefs":{"Monarch":{"xref_id":"0005679"}}}


id: PR:Q09809
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2G11.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium permeable stress-gated cation channel 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.09","synonyms":[{"name":"SpCSC1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC2G11.09","type":"exact"}],"termid":"PR:Q09809"}


id: PBO:0043148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 16","termid":"PBO:0043148"}


id: PBO:0056985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30d","termid":"PBO:0056985"}


id: MONDO:0017512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split hand, bilateral is a rare, non-syndromic limb reduction defect, clinically and genetically heterogeneous, characterized by bilateral underdevelopment or absence of the central rays of the autopod, with absence of all, or just some, of the central phalanges and at least part of the associated metacarpal bones, yielding a cleft appearance of the hand. It is frequently associated with syndactyly and aplasia/hypoplasia of remaining digits and metacarpal bones. No other dysmorphic features are observed and development is appropriate for age.","definition_xrefs":["Orphanet:295122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split hand","termid":"MONDO:0017449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand, bilateral","secondary_identifiers":["MEDGEN:1752875","UMLS:C5438934","icd11.foundation:1096991220"],"termid":"MONDO:0017512","xrefs":{"Monarch":{"xref_id":"0017512"}}}


id: FYECO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing peptone, yeast extract and other components. The concentration of glucose is typically around 2-3%. Note that peptone, which is a mixture of nutrients generated by proteolytic digestion of animal protein with trypsin, is not normally a component of S. pombe rich media (it is however normally present in S. cerevisiae rich media).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPD","synonyms":[{"name":"glucose rich medium, peptone/YE nitrogen source","type":"broad"}],"termid":"FYECO:0000201"}


id: PBO:0084525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the conserved GPN-loop GTPase family; has a role in transport of RNA polymerase II to the nucleus; exhibits GTP-dependent binding to PolII; has ATPase activity; involved in sister chromatid cohesion; phosphorylated by the Pcl1p-Pho85p kinase complex; human homolog XAB1 interacts with human RNA polymerase II; protein abundance increases in response to DNA replication stress","termid":"PBO:0084525"}


id: PBO:0067324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 415, pseudogene","termid":"PBO:0067324"}


id: GO:0018556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxybenzenoid + O2 = H+ + distal extradiol ring cleavage. Substrates are 2,2',3-trihydroxybiphenyl (forms 2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate) and 2,2',3-trihydroxydiphenylether (forms 2,3-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate).","definition_xrefs":["UM-BBD_enzymeID:e0032"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,2',3-trihydroxybiphenyl dioxygenase activity (obsolete GO:0018556)","termid":"GO:0018556"}


id: GO:0072253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric juxtaglomerulus cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell fate commitment","termid":"GO:0072150"},{"relation_name":"part_of","term_name":"metanephric juxtaglomerulus cell differentiation","termid":"GO:0072251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerulus cell fate commitment","termid":"GO:0072253"}


id: GO:1900296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heptasaccharide transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of heptasaccharide transport","termid":"GO:1900294"},{"relation_name":"positively_regulates","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of heptasaccharide transport","synonyms":[{"name":"activation of heptasaccharide transport","type":"narrow"},{"name":"up regulation of heptasaccharide transport","type":"exact"},{"name":"up-regulation of heptasaccharide transport","type":"exact"},{"name":"upregulation of heptasaccharide transport","type":"exact"}],"termid":"GO:1900296"}


id: PBO:0081451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 318","termid":"PBO:0081451"}


id: GO:0043956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypropionyl-CoA = acryloyl-CoA + H2O.","definition_xrefs":["GOC:jl","PMID:11821399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enoyl-CoA hydratase activity","termid":"GO:0004300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxypropionyl-CoA dehydratase activity","secondary_identifiers":["EC:4.2.1.116","RHEA:26518","MetaCyc:RXN-6383"],"synonyms":[{"name":"3-hydroxy propionyl-CoA dehydratase activity","type":"exact"},{"name":"AMP-dependent synthetase and ligase","type":"broad"},{"name":"AMP-dependent synthetase and ligase:Enoyl-CoA hydratase/isomerase","type":"broad"},{"name":"acetyl-coenzyme A synthetase","type":"broad"},{"name":"acetyl-coenzyme A synthetase/GroES-like domain","type":"broad"},{"name":"enoyl-CoA hydratase/isomerase","type":"broad"}],"termid":"GO:0043956"}


id: PBO:0029403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_latrunculin_B","termid":"PBO:0029403"}


id: PBO:0077485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 204","termid":"PBO:0077485"}


id: PBO:0056243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog B, exon junction complex subunit","termid":"PBO:0056243"}


id: FYPO:0006414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is higher than normal (i.e. lower than observed in wild-type cells) during interphase of the mitotic cell cycle. Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PomBase:mah","PMID:17452352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of histone gene mRNA during vegetative growth","termid":"FYPO:0006413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased level of histone gene mRNA during mitotic interphase","synonyms":[{"name":"increased histone gene mRNA accumulation during mitotic interphase","type":"related"},{"name":"increased level of histone gene RNA during mitotic interphase","type":"exact"},{"name":"increased level of histone gene mRNA during interphase of mitotic cell cycle","type":"exact"},{"name":"increased level of histone gene transcripts during mitotic interphase","type":"exact"}],"termid":"FYPO:0006414"}


id: PBO:0085321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 4,5-bisphosphate 5-phosphatase; synaptojanin-like protein with an N-terminal Sac1 domain, plays a role in phosphatidylinositol 4,5-bisphosphate homeostasis and in endocytosis; null mutation confers cold-tolerant growth","termid":"PBO:0085321"}


id: PBO:0090190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Pho7","termid":"PBO:0090190"}


id: GO:0098976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synaptic transmission that results in an excitatory postsynaptic potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"excitatory chemical synaptic transmission","termid":"GO:0098976"}


id: PBO:0085987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for normal growth rate at 15 degrees C; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; mtc4 is synthetically sick with cdc13-1","termid":"PBO:0085987"}


id: PR:O74895
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl15 gene.","definition_xrefs":["UniProtKB:O74895","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.11","synonyms":[{"name":"Spom972h-rpl15","type":"exact"}],"termid":"PR:O74895"}


id: MONDO:0024609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive squamous cell carcinoma arising from the vulva. Risk factors include the human papilloma virus and cigarette smoking. Precursor lesions include the vulvar intraepithelial neoplasia, lichen sclerosus with associated squamous cell hyperplasia, and chronic granulomatous vulvar disease such as granuloma inguinale. Symptoms include vulvar pruritus or irritation, discharge, bleeding, and pain. The following morphologic variants have been identified: keratinizing, non-keratinizing, basaloid, warty, verrucous, keratoacanthoma-like, and squamous cell carcinoma with tumor giant cells. Risk factors for recurrence include advanced stage, tumor diameter greater than 2.5 cm, multifocality, capillary-like space involvement, associated vulvar intraepithelial neoplasia grades 2 or 3, and margins of resection involved by tumor. (WHO, 2003)","definition_xrefs":["NCIT:C4052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar squamous neoplasm","termid":"MONDO:0002195"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"vulvar carcinoma","termid":"MONDO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar squamous cell carcinoma","secondary_identifiers":["DOID:2101","icd11.foundation:146824338","GARD:22005","UMLS:C0280856","MEDGEN:79201","SCTID:254895003","Orphanet:494448","EFO:1000624"],"synonyms":[{"name":"epidermoid carcinoma of the vulva","type":"exact"},{"name":"epidermoid carcinoma of vulva","type":"exact"},{"name":"epidermoid cell carcinoma of the vulva","type":"exact"},{"name":"epidermoid cell carcinoma of vulva","type":"exact"},{"name":"mammalian vulva squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of the vulva","type":"exact"},{"name":"squamous cell carcinoma of vulva","type":"exact"},{"name":"vulva epidermoid carcinoma","type":"exact"},{"name":"vulva epidermoid cell carcinoma","type":"exact"},{"name":"vulva squamous cell carcinoma","type":"exact"},{"name":"vulvar epidermoid carcinoma","type":"exact"},{"name":"vulvar epidermoid cell carcinoma","type":"exact"},{"name":"vulvar squamous cell cancer","type":"exact"},{"name":"vulvar squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0024609","xrefs":{"Monarch":{"xref_id":"0024609"}}}


id: PBO:0004315
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.48","termid":"PBO:0004315"}


id: PBO:0073224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 7A (John Milton Hagen blood group)","termid":"PBO:0073224"}


id: PBO:0003691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp2","termid":"PBO:0003691"}


id: PBO:0064551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 13, pseudogene","termid":"PBO:0064551"}


id: GO:1905183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of protein serine/threonine phosphatase activity.","definition_xrefs":["GO_REF:0000059","PMID:16950131","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein serine/threonine phosphatase activity (obsolete GO:1905183)","synonyms":[{"name":"down regulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"down regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"down-regulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"down-regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"downregulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"downregulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"inhibition of protein serine/threonine phosphatase activity","type":"narrow"},{"name":"inhibition of serine/threonine specific protein phosphatase activity","type":"narrow"},{"name":"negative regulation of serine/threonine specific protein phosphatase activity","type":"exact"}],"termid":"GO:1905183"}


id: MONDO:0008702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achondrogenesis type 2 (ACG2), a form of achondrogenesis, is a very rare and lethal skeletal dysplasia and part of the spectrum of type 2 collagen-related bone disorders, characterizedby severe micromelia, short neck with large head, small thorax, protuberant abdomen, underdeveloped lungs, distinctive facial features such as a prominent forehead, a small chin, a cleft palate (in some) and distinctive histological features of the cartilage.","definition_xrefs":["Orphanet:93296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achondrogenesis","termid":"MONDO:0019648"},{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"achondrogenesis type II","secondary_identifiers":["GARD:8713","NANDO:2201345","MEDGEN:66315","OMIM:200610","DOID:0080056","UMLS:C0220685","MESH:C536017"],"synonyms":[{"name":"ACG2","type":"related"},{"name":"achondrogenesis type 2","type":"related"},{"name":"achondrogenesis type II","type":"exact"},{"name":"achondrogenesis, Langer-Saldino type","type":"exact"},{"name":"achondrogenesis, type 2","type":"related"},{"name":"achondrogenesis, type IB","type":"related"},{"name":"achondrogenesis, type IB, formerly","type":"related"},{"name":"achondrogenesis, type II","type":"related"},{"name":"achondrogenesis, type II or hypochondrogenesis","type":"exact"},{"name":"chondrogenesis imperfecta","type":"related"},{"name":"hypochondrogenesis","type":"related"}],"termid":"MONDO:0008702","xrefs":{"Monarch":{"xref_id":"0008702"}}}


id: MONDO:0017837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple sclerosis-ichthyosis-factor VIII deficiency syndrome is characterized by the association of multiple sclerosis with lamellar ichthyosis and hematological anomalies (beta thalassemia minor and a quantitative deficit of factor VIII-von Willebrand complex). Other clinical manifestations may include eye involvement (optic atrophy, diplopia), neuromuscular involvement (ataxia, pyramidal syndrome, gait disturbance) and sensory disorder. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:3151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"multiple sclerosis-ichthyosis-factor VIII deficiency syndrome","secondary_identifiers":["MEDGEN:1391655","UMLS:C4518551","GARD:18787"],"termid":"MONDO:0017837","xrefs":{"Monarch":{"xref_id":"0017837"}}}


id: MONDO:0014281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cholangiocarcinoma","termid":"MONDO:0019087"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholangiocarcinoma, susceptibility to","secondary_identifiers":["OMIM:615619","MEDGEN:816486","UMLS:C3810156"],"synonyms":[{"name":"Chlc, susceptibility to","type":"related"},{"name":"cholangiocarcinoma, susceptibility to","type":"exact"}],"termid":"MONDO:0014281","xrefs":{"Monarch":{"xref_id":"0014281"}}}


id: PBO:0068053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 358","termid":"PBO:0068053"}


id: GO:0030037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle process in which rearrangement of the spatial distribution of actin filaments and associated proteins occurs.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament reorganization involved in cell cycle (obsolete GO:0030037)","synonyms":[{"name":"actin filament reorganisation involved in cell cycle","type":"exact"},{"name":"actin filament reorganization during cell cycle","type":"related"}],"termid":"GO:0030037"}


id: _global:affected_by
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a gene product that influences the modification, where the experiment does not distinguish between direct action (e.g. adds or removes a modification) and indirect effects.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"affected_by","termid":"_global:affected_by"}


id: GO:0031787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a H9 melatonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"H9 melatonin receptor binding","synonyms":[{"name":"H9 melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031787"}


id: PBO:0039704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apelin","termid":"PBO:0039704"}


id: GO:0030300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of absorption of cholesterol into the blood, and the exclusion of other sterols from absorption.","definition_xrefs":["PMID:11099417","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal lipid absorption","termid":"GO:1904729"},{"relation_name":"regulates","term_name":"intestinal cholesterol absorption","termid":"GO:0030299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal cholesterol absorption","termid":"GO:0030300"}


id: GO:0052034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of the innate immune response of the host organism via recognition of a microbe-associated molecular pattern. The innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"effector-mediated suppression of host innate immune response","termid":"GO:0140403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated suppression of host pattern-triggered immunity","secondary_identifiers":["GO:0052258"],"synonyms":[{"name":"down regulation by symbiont of pathogen-associated molecular pattern-induced host innate immunity","type":"related"},{"name":"down-regulation by symbiont of pathogen-associated molecular pattern-induced host innate immunity","type":"related"},{"name":"downregulation by symbiont of pathogen-associated molecular pattern-induced host innate immunity","type":"related"},{"name":"inhibition by symbiont of pathogen-associated molecular pattern-induced host innate immunity","type":"related"},{"name":"negative regulation by organism of pathogen-associated molecular pattern-induced innate immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of microbe-associated molecular pattern-induced host innate immune response","type":"related"},{"name":"negative regulation by symbiont of microbe-associated molecular pattern-induced host innate immunity","type":"related"},{"name":"suppression by symbiont of microbe-associated molecular pattern-induced host innate immune response","type":"broad"},{"name":"suppression of MAMP induced host innate immunity","type":"related"},{"name":"suppression of MAMP-induced host innate immunity","type":"related"},{"name":"suppression of PAMP induced host innate immunity","type":"related"},{"name":"suppression of PAMP-induced host innate immunity","type":"related"},{"name":"suppression of general elicitor induced host innate immunity","type":"related"},{"name":"suppression of general elicitor-induced host innate immunity","type":"related"},{"name":"suppression of pathogen-associated molecular pattern-induced host innate immunity","type":"related"}],"termid":"GO:0052034"}


id: MONDO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Otofaciocervical syndrome (obsolete MONDO:0000194)","termid":"MONDO:0000194","xrefs":{"Monarch":{"xref_id":"0000194"}}}


id: GO:0043983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 12 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K12 acetylation (obsolete GO:0043983)","synonyms":[{"name":"histone H4 acetylation at K12","type":"exact"}],"termid":"GO:0043983"}


id: GO:0034137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 2 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 2 signaling pathway","termid":"GO:0034135"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 2 signaling pathway","termid":"GO:0034134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 2 signaling pathway","synonyms":[{"name":"positive regulation of TLR2 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 2 signalling pathway","type":"exact"}],"termid":"GO:0034137"}


id: PR:O14121
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nde2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.07","synonyms":[{"name":"Spom972h-nde2","type":"exact"}],"termid":"PR:O14121"}


id: PBO:0089171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBP4H10.18c ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0089171"}


id: PBO:0074157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F1","termid":"PBO:0074157"}


id: PBO:0055421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2851","termid":"PBO:0055421"}


id: GO:0019250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12) in the presence of oxygen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobalamin biosynthetic process","termid":"GO:0009236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150","GO:0033013"],"is_obsolete":false,"name":"aerobic cobalamin biosynthetic process","secondary_identifiers":["MetaCyc:P381-PWY"],"synonyms":[{"name":"aerobic cobalamin anabolism","type":"exact"},{"name":"aerobic cobalamin biosynthesis","type":"exact"},{"name":"aerobic cobalamin formation","type":"exact"},{"name":"aerobic cobalamin synthesis","type":"exact"},{"name":"aerobic vitamin B12 biosynthesis","type":"exact"},{"name":"aerobic vitamin B12 biosynthetic process","type":"exact"},{"name":"cobalamin biosynthesis, aerobic","type":"exact"},{"name":"cobalamin biosynthetic process, aerobic","type":"exact"},{"name":"vitamin B12 biosynthesis, aerobic","type":"exact"},{"name":"vitamin B12 biosynthetic process, aerobic","type":"exact"}],"termid":"GO:0019250"}


id: MONDO:0002830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovary transitional cell carcinoma (obsolete MONDO:0002830)","termid":"MONDO:0002830","xrefs":{"Monarch":{"xref_id":"0002830"}}}


id: PBO:0086889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane polyol transporter; supports growth on and uptake of mannitol, sorbitol and xylitol with moderate affinity when overexpressed in a strain deleted for hexose family members; minor hexose transport activity when overexpressed in a similar strain; similarity to hexose transporters; expression is induced by low levels of glucose and repressed by high levels of glucose","termid":"PBO:0086889"}


id: GO:0097131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D1 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin D1-CDK6 complex","termid":"GO:0097131"}


id: PBO:0058238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4526","termid":"PBO:0058238"}


id: PBO:0041153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 8","termid":"PBO:0041153"}


id: PBO:0027313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_template_switch-mediated_chromosomal_rearrangement_during_replication_fork_processing","termid":"PBO:0027313"}


id: PR:O59767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle assembly checkpoint component MAD3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:11909965","PRO:KER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle assembly checkpoint component MAD3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.01c","secondary_identifiers":["UniProtKB:O59767","PR:000035573"],"synonyms":[{"name":"SPCC1795.01C","type":"related"},{"name":"SPCC895.02","type":"related"},{"name":"Spom972h-MAD3","type":"exact"},{"name":"mitotic spindle checkpoint component mad3","type":"exact"}],"termid":"PR:O59767"}


id: PBO:0056544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF2L2 pseudogene 1","termid":"PBO:0056544"}


id: GO:0050287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-sorbose + NADP+ = 5-dehydro-D-fructose + H+ + NADPH.","definition_xrefs":["EC:1.1.1.123","RHEA:15001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sorbose 5-dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:SORBOSE-5-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R01694"],"synonyms":[{"name":"5-keto-D-fructose reductase activity","type":"related"},{"name":"5-ketofructose reductase activity","type":"related"},{"name":"L-sorbose:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate-linked reductase activity","type":"related"},{"name":"sorbose (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"}],"termid":"GO:0050287"}


id: PBO:0039288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG3 alpha-1,3- mannosyltransferase","termid":"PBO:0039288"}


id: SO:0001248
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the genome of known length that is composed by ordering and aligning two or more different regions.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly","secondary_identifiers":["http://en.wikipedia.org/wiki/Genome_assembly#Genome_assembly"],"termid":"SO:0001248"}


id: GO:0009390
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of dimethyl sulfide from dimethyl sulfoxide.","definition_xrefs":["PMID:21357619","PMID:3280546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dimethyl sulfoxide reductase complex","synonyms":[{"name":"dimethyl sulphoxide reductase complex","type":"exact"}],"termid":"GO:0009390"}


id: PBO:0016884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein","termid":"PBO:0016884"}


id: PBO:0069683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 960, pseudogene","termid":"PBO:0069683"}


id: MONDO:0007619
data:
  {"annotated_genes":["SJAG_01938","SJAG_01878","SJAG_02698"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88286,88287,88288],"is_not":false,"summary":null,"term":"MONDO:0007619"}]},"cv_name":"mondo","definition":"Isolated congenital adermatoglyphia is a rare, genetic develomental defect during embryogenesis disorder characterized by the lack of epidermal ridges on the palms and soles, resulting in the absence of fingerprints, with no other associated manifestations. It is associated with a reduced number of sweat gland openings and reduced transpiration of palms and soles.","definition_xrefs":["Orphanet:289465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01878":null,"SJAG_01938":null,"SJAG_02698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"isolated congenital adermatoglyphia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1852150","SCTID:763748007","MESH:C565010","DOID:0111357","GARD:12550","OMIM:136000","MEDGEN:338875"],"synonyms":[{"name":"ADERM","type":"exact"},{"name":"ADG","type":"broad"},{"name":"absence of fingerprints","type":"broad"},{"name":"adermatoglyphia","type":"broad"},{"name":"congenital absence of fingerprints","type":"exact"},{"name":"fingerprints, absence of","type":"broad"},{"name":"immigration delay disease","type":"exact"},{"name":"isolated congenital adermatoglyphia","type":"exact"}],"termid":"MONDO:0007619","terms_by_termid":{"MONDO:0007619":null},"xrefs":{"Monarch":{"xref_id":"0007619"}}}


id: MONDO:1012449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma of the digit, non-human animal","termid":"MONDO:1011822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous cell carcinoma of the digit, dog","secondary_identifiers":["OMIA:001787-9615"],"termid":"MONDO:1012449","xrefs":{"Monarch":{"xref_id":"1012449"}}}


id: GO:0008190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation factor binding","termid":"GO:0031369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"eukaryotic initiation factor 4E binding","synonyms":[{"name":"eIF4E binding","type":"exact"}],"termid":"GO:0008190"}


id: PBO:0044086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A6","termid":"PBO:0044086"}


id: PBO:0077051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRB antisense RNA 2","termid":"PBO:0077051"}


id: PBO:0069136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 387, pseudogene","termid":"PBO:0069136"}


id: PR:P87118
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inorganic pyrophosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00572","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase C3A12.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.02","secondary_identifiers":["UniProtKB:P87118"],"synonyms":[{"name":"PPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPA1","type":"exact"},{"name":"pyrophosphate phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87118"}


id: PBO:0043155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 23","termid":"PBO:0043155"}


id: MONDO:0033646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 12","secondary_identifiers":["GARD:16410","MEDGEN:1745691","OMIM:619055","UMLS:C5436695","DOID:0070498"],"synonyms":[{"name":"MC4DN12","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 12","type":"exact"}],"termid":"MONDO:0033646","xrefs":{"Monarch":{"xref_id":"0033646"}}}


id: GO:0097726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a LEM domain. The LEM domain (for lamina-associated polypeptide, emerin, MAN1 domain) is present in a group of nuclear proteins that bind chromatin through interaction of the LEM motif with the conserved DNA crosslinking protein, barrier-to-autointegration factor (BAF).","definition_xrefs":["GOC:rz","PMID:22399800","InterPro:IPR003887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"LEM domain binding","synonyms":[{"name":"LAP2, emerin, MAN1 domain binding","type":"exact"},{"name":"lamina-associated polypeptide, emerin, MAN1 domain binding","type":"exact"}],"termid":"GO:0097726"}


id: PBO:0063324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCMTD1 divergent transcript","termid":"PBO:0063324"}


id: MONDO:0045058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma or carcinoma of the pituitary gland that produces corticotropin.","definition_xrefs":["NCIT:C7909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-producing pituitary gland neoplasm","secondary_identifiers":["UMLS:C0278862","MEDGEN:82997"],"synonyms":[{"name":"ACTH producing pituitary gland neoplasm","type":"exact"},{"name":"ACTH-producing pituitary gland neoplasm","type":"exact"},{"name":"ACTH-producing pituitary neoplasm","type":"exact"},{"name":"ACTH-producing pituitary tumor","type":"exact"},{"name":"ACTH-producing pituitary tumour","type":"exact"},{"name":"ACTH-secreting tumor of pituitary","type":"exact"},{"name":"ACTH-secreting tumor of the pituitary","type":"exact"},{"name":"ACTH-secreting tumour of pituitary","type":"exact"},{"name":"ACTH-secreting tumour of the pituitary","type":"exact"},{"name":"adrenocorticotropin producing pituitary gland tumor","type":"exact"},{"name":"adrenocorticotropin producing pituitary gland tumour","type":"exact"},{"name":"adrenocorticotropin secreting neoplasm of pituitary","type":"exact"},{"name":"adrenocorticotropin secreting neoplasm of the pituitary","type":"exact"},{"name":"adrenocorticotropin secreting pituitary gland tumor","type":"exact"},{"name":"adrenocorticotropin secreting pituitary gland tumour","type":"exact"},{"name":"adrenocorticotropin secreting tumor of pituitary","type":"exact"},{"name":"adrenocorticotropin secreting tumor of the pituitary","type":"exact"},{"name":"adrenocorticotropin secreting tumour of pituitary","type":"exact"},{"name":"adrenocorticotropin secreting tumour of the pituitary","type":"exact"},{"name":"corticotropin secreting pituitary gland neoplasm","type":"exact"},{"name":"pituitary corticotropin secreting neoplasm","type":"exact"},{"name":"pituitary corticotropin secreting tumor","type":"exact"},{"name":"pituitary corticotropin secreting tumour","type":"exact"}],"termid":"MONDO:0045058","xrefs":{"Monarch":{"xref_id":"0045058"}}}


id: PBO:0059215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRNIP divergent transcript","termid":"PBO:0059215"}


id: MONDO:0012433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Senior-Loken syndrome in which the cause of the disease is a mutation in the CEP290 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Senior-Loken syndrome","termid":"MONDO:0017842"},{"relation_name":"is_a","term_name":"CEP290-related ciliopathy","termid":"MONDO:0100451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"Senior-Loken syndrome 6","secondary_identifiers":["MEDGEN:387907","MESH:C565708","OMIM:610189","GARD:15476","UMLS:C1857779"],"synonyms":[{"name":"CEP290 Senior-Loken syndrome","type":"exact"},{"name":"SENIOR-Loken syndrome 6","type":"related"},{"name":"SLSN6","type":"related"},{"name":"Senior-Loken syndrome 6","type":"exact"},{"name":"Senior-Loken syndrome caused by mutation in CEP290","type":"exact"},{"name":"Senior-Loken syndrome type 6","type":"exact"}],"termid":"MONDO:0012433","xrefs":{"Monarch":{"xref_id":"0012433"}}}


id: GO:0052131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerotaxis","termid":"GO:0009454"},{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"is_a","term_name":"positive energy taxis","termid":"GO:0052128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive aerotaxis","termid":"GO:0052131"}


id: GO:0034010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfolactate = pyruvate + sulfite.","definition_xrefs":["RHEA:21428","EC:4.4.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"sulfolactate sulfo-lyase activity","secondary_identifiers":["MetaCyc:RXN-11691","KEGG_REACTION:R07633"],"synonyms":[{"name":"3-sulfolactate bisulfite-lyase (pyruvate-forming) activity","type":"related"},{"name":"3-sulfolactate bisulfite-lyase activity","type":"related"},{"name":"Suy","type":"related"},{"name":"SuyAB","type":"related"}],"termid":"GO:0034010"}


id: GO:1902633
data:
  {"annotated_genes":["SJAG_01863","SJAG_00053","SJAG_03170","SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[59688,92236],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[119523],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["GO_REF:0000068","PMID:22562153","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01863":null,"SJAG_02613":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:1902633","terms_by_termid":{"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: PR:O74389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug176 gene.","definition_xrefs":["UniProtKB:O74389","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 176 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.14","synonyms":[{"name":"Spom972h-mug176","type":"exact"}],"termid":"PR:O74389"}


id: GO:0010700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of norepinephrine secretion","termid":"GO:0014061"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine secretion","termid":"GO:0033604"},{"relation_name":"negatively_regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of norepinephrine secretion","termid":"GO:0010700"}


id: PBO:0072572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase regulatory subunit M2","termid":"PBO:0072572"}


id: GO:0050762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of depsipeptides, a linear or cyclic compound composed of both amino acids and hydroxy acids in peptide and ester bonds respectively.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"depsipeptide metabolic process","termid":"GO:0050761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"depsipeptide catabolic process","synonyms":[{"name":"depsipeptide breakdown","type":"exact"},{"name":"depsipeptide catabolism","type":"exact"},{"name":"depsipeptide degradation","type":"exact"}],"termid":"GO:0050762"}


id: PBO:0116739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIAH2 and CLRN1 antisense RNA 1","termid":"PBO:0116739"}


id: GO:0035189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex containing a heterodimeric E2F transcription factor and a Retinoblastoma (Rb) family member. This complex is capable of repressing transcription of E2F-regulated genes in order to regulate cell cycle progression.","definition_xrefs":["PMID:14616073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Rb-E2F complex","synonyms":[{"name":"retinoblastoma-E2F complex","type":"exact"}],"termid":"GO:0035189"}


id: FYPO:0001947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which progression through the mitotic cell cycle is arrested in anaphase under conditions where arrest does not normally occur, and sister chromatids have not separated. The unseparated chromosomes remain condensed.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell cycle arrest in mitotic anaphase, with unseparated sister chromatids (obsolete FYPO:0001947)","synonyms":[{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated sister chromatids, during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated, condensed chromosomes","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated, condensed sister chromatids","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in anaphase, with unseparated sister chromatids","type":"exact"},{"name":"absence of chromosome separation, abnormal mitotic anaphase arrest with condensed chromosomes","type":"exact"}],"termid":"FYPO:0001947"}


id: PBO:0048026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled related protein","termid":"PBO:0048026"}


id: FYPO:0009099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing mannitol as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell population growth on mannitol carbon source","synonyms":[{"name":"decreased growth on mannitol carbon source","type":"broad"},{"name":"decreased vegetative cell growth on mannitol carbon source","type":"exact"},{"name":"reduced cell growth on mannitol carbon source","type":"related"},{"name":"slow cell growth on mannitol carbon source","type":"narrow"}],"termid":"FYPO:0009099"}


id: PBO:0063915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta","termid":"PBO:0063915"}


id: PBO:0084430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL64 is a nonfunctional homolog of the MAL63 trans-activator; encoded within the complex locus MAL6","termid":"PBO:0084430"}


id: MOD:00619
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because entry 300 is redundant with Unimod 6 remap to MOD:01328","definition_xrefs":["Unimod:300"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00619 hydroxylethanone (obsolete MOD:00619)","termid":"MOD:00619"}


id: GO:0140886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of interferon-mediated signaling in the host organism.","definition_xrefs":["PMID:34305858","PMID:31266861","PMID:33097660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","synonyms":[{"name":"inhibition of host interferon signaling pathway by symbiont","type":"related"},{"name":"negative regulation by virus of host interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by symbiont of host IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by symbiont of host interferon-mediated signalling pathway","type":"exact"},{"name":"suppression by virus of host interferon-mediated signaling pathway","type":"narrow"}],"termid":"GO:0140886"}


id: GO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Outer arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes. Outer dynein arms contain 2-3 heavy chains, two or more intermediate chains and a cluster of 4-8 light chains. Inner and outer dynein arms have different functions in the generation of microtubule-based motility.","definition_xrefs":["PMID:2557057","GOC:BHF","PMID:6218174","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex","termid":"GO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"outer dynein arm","synonyms":[{"name":"outer dynein arm complex","type":"exact"}],"termid":"GO:0036157"}


id: PBO:0076039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 36","termid":"PBO:0076039"}


id: GO:0030050
data:
  {"annotated_genes":["SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118166],"is_not":false,"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"Movement of a vesicle along an actin filament, mediated by motor proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based movement","termid":"GO:0030048"},{"relation_name":"is_a","term_name":"actin filament-based transport","termid":"GO:0099515"},{"relation_name":"is_a","term_name":"vesicle cytoskeletal trafficking","termid":"GO:0099518"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vesicle transport along actin filament","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030050","terms_by_termid":{"GO:0030050":null}}


id: PBO:0081322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 112","termid":"PBO:0081322"}


id: FYPO:0000791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cortical patches is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"},{"relation_name":"is_a","term_name":"abnormal actin cortical patch","termid":"FYPO:0003987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cortical patch morphology","synonyms":[{"name":"abnormal F-actin patch morphology","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch morphology during vegetative growth","type":"exact"},{"name":"abnormal actin patch morphology","type":"exact"}],"termid":"FYPO:0000791"}


id: GO:0007034
data:
  {"annotated_genes":["SJAG_04024","SJAG_03403","SJAG_01809","SJAG_03385","SJAG_00821","SJAG_05245","SJAG_02240","SJAG_01876","SJAG_02584","SJAG_01360","SJAG_03848","SJAG_03783","SJAG_03250","SJAG_03756","SJAG_02811","SJAG_00900","SJAG_04643","SJAG_00108","SJAG_05303","SJAG_01445","SJAG_03511","SJAG_05210","SJAG_03963","SJAG_04600","SJAG_01080","SJAG_03970","SJAG_00301","SJAG_01242","SJAG_04912","SJAG_00916","SJAG_01488","SJAG_04902","SJAG_02234","SJAG_02587","SJAG_04931","SJAG_01598","SJAG_16459","SJAG_04047","SJAG_03137","SJAG_01527","SJAG_03726","SJAG_03005","SJAG_03860","SJAG_01281","SJAG_01981","SJAG_03072","SJAG_03962","SJAG_01229","SJAG_00299","SJAG_00208","SJAG_01645","SJAG_02453","SJAG_01913","SJAG_04822","SJAG_02117","SJAG_00181","SJAG_03442","SJAG_04349","SJAG_04489","SJAG_01367","SJAG_04023","SJAG_00380","SJAG_04966","SJAG_04936","SJAG_03892","SJAG_02349","SJAG_01586","SJAG_03976","SJAG_02912","SJAG_02049","SJAG_01088","SJAG_01324","SJAG_03347","SJAG_00204","SJAG_02315","SJAG_07012","SJAG_04552","SJAG_05207","SJAG_04070","SJAG_02371","SJAG_00416","SJAG_00777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72633,73689,79228,90927,97693,116495],"is_not":false,"summary":null,"term":"GO:0007034"},{"annotations":[93336,107677,93475,70905,115278,89936,116428,65811,89820,64868,64453,69273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[110743,79400,79489,79944,77938,103348,92403,98751,113461,99016,119541,97996,71693,79515,96032,112217,81426,75279,77884,101392,101798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006896"},{"annotations":[103877,112850,102200,103012,79061,107634,102142,78545,111759,110937,118885,77504,120442,92003,109559,75749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045324"},{"annotations":[109058,112160,72445,106028,81035,100742,105046,77072,77753,100560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[92832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[78959,79943,75747,77502,79487,74499,79060,72975,82176,98423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[73878,108491,79513,89766,102781,99833,97826,72663,111325,93478,75256,79979,89939,72833,73914,75277,80258,93339,116689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances into, out of or within a vacuole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":82,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00777":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_00916":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01324":null,"SJAG_01360":null,"SJAG_01367":null,"SJAG_01445":null,"SJAG_01488":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_01876":null,"SJAG_01913":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02315":null,"SJAG_02349":null,"SJAG_02371":null,"SJAG_02453":null,"SJAG_02584":null,"SJAG_02587":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03385":null,"SJAG_03403":null,"SJAG_03442":null,"SJAG_03511":null,"SJAG_03726":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03848":null,"SJAG_03860":null,"SJAG_03892":null,"SJAG_03962":null,"SJAG_03963":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04600":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_04912":null,"SJAG_04931":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05303":null,"SJAG_07012":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vacuolar transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0007034","terms_by_termid":{"GO:0006623":null,"GO:0006896":null,"GO:0007034":null,"GO:0032511":null,"GO:0043328":null,"GO:0044395":null,"GO:0045324":null,"GO:0120113":null}}


id: FYPO:0001666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cAMP level","synonyms":[{"name":"normal cellular cAMP level","type":"exact"},{"name":"normal cyclic AMY level","type":"exact"}],"termid":"FYPO:0001666"}


id: PBO:0003708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 2 (predicted)","termid":"PBO:0003708"}


id: PBO:0050417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D pseudogene 1","termid":"PBO:0050417"}


id: GO:1902859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionyl-CoA.","definition_xrefs":["GO_REF:0000068","PMID:15514053","GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"propionyl-CoA metabolic process","termid":"GO:1902858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"propionyl-CoA catabolic process","synonyms":[{"name":"propionyl-CoA breakdown","type":"exact"},{"name":"propionyl-CoA catabolism","type":"exact"},{"name":"propionyl-CoA degradation","type":"exact"}],"termid":"GO:1902859"}


id: PR:Q9USH6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- naa40 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USH6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C825.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.04c","synonyms":[{"name":"Spom972h-naa40","type":"exact"}],"termid":"PR:Q9USH6"}


id: FYPO:0003694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 18S ribosomal RNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature rRNA level","termid":"FYPO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased mature 18S rRNA level","synonyms":[{"name":"decreased 18S rRNA level","type":"broad"},{"name":"decreased mature 18S rRNA accumulation","type":"related"},{"name":"decreased mature 18S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature 18S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 18S rRNA transcript level","type":"exact"},{"name":"reduced mature 18S rRNA level","type":"exact"}],"termid":"FYPO:0003694"}


id: PBO:0028097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0028097"}


id: PBO:0030848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation","termid":"PBO:0030848"}


id: GO:0008777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N2-acetyl-L-ornithine + H2O = acetate + L-ornithine.","definition_xrefs":["EC:3.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0019213","GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"acetylornithine deacetylase activity","secondary_identifiers":["RHEA:15941","MetaCyc:ACETYLORNDEACET-RXN"],"synonyms":[{"name":"2-N-acetyl-L-ornithine amidohydrolase activity","type":"related"},{"name":"N-acetylornithinase activity","type":"broad"},{"name":"N2-acetyl-L-ornithine amidohydrolase activity","type":"related"},{"name":"acetylornithinase activity","type":"broad"}],"termid":"GO:0008777"}


id: GO:1900123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nodal receptor complex assembly.","definition_xrefs":["GOC:signaling","PMID:15062104","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"nodal receptor complex assembly","termid":"GO:0038099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of nodal receptor complex assembly","synonyms":[{"name":"regulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"regulation of nodal receptor complex formation","type":"exact"}],"termid":"GO:1900123"}


id: GO:0099555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of nitric oxide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by nitric oxide","termid":"GO:0099548"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by nitric oxide, modulating synaptic transmission","termid":"GO:0099555"}


id: PBO:0040004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL14EP divergent transcript","termid":"PBO:0040004"}


id: MONDO:0013372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any long QT syndrome in which the cause of the disease is a mutation in the KCNE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 5","secondary_identifiers":["DOID:0110647","GARD:10433","MEDGEN:358092","NCIT:C172094","OMIM:613695","UMLS:C1867904","HGNC:6240","MESH:C566766"],"synonyms":[{"name":"KCNE1 long QT syndrome","type":"exact"},{"name":"LQT5","type":"exact"},{"name":"long QT syndrome 2/5, digenic","type":"related"},{"name":"long QT syndrome 5","type":"exact"},{"name":"long QT syndrome 5, acquired, susceptibility to","type":"related"},{"name":"long QT syndrome caused by mutation in KCNE1","type":"exact"},{"name":"long QT syndrome type 5","type":"exact"}],"termid":"MONDO:0013372","xrefs":{"Monarch":{"xref_id":"0013372"}}}


id: MONDO:0030531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 65","secondary_identifiers":["MEDGEN:1794277","OMIM:619712","UMLS:C5562067","DOID:0112354"],"synonyms":[{"name":"SPGF65","type":"exact"}],"termid":"MONDO:0030531","xrefs":{"Monarch":{"xref_id":"0030531"}}}


id: FYPO:0004491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at one or more specific sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:17446861","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"decreased nucleosome occupancy","synonyms":[{"name":"decreased nucleosome occupancy during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy during vegetative growth","type":"exact"},{"name":"reduced nucleosome occupancy","type":"exact"}],"termid":"FYPO:0004491"}


id: FYPO:0003189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein import into the nucleus is decreased. Import of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nuclear import","termid":"FYPO:0000515"},{"relation_name":"is_a","term_name":"decreased protein transport during vegetative growth","termid":"FYPO:0000541"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"},{"relation_name":"is_a","term_name":"abnormal protein import into nucleus during vegetative growth","termid":"FYPO:0003188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein import into nucleus","synonyms":[{"name":"decreased protein import into nucleus during mitotic cell cycle","type":"related"},{"name":"decreased protein import into nucleus during vegetative growth","type":"exact"},{"name":"reduced protein import into nucleus","type":"exact"}],"termid":"FYPO:0003189"}


id: PBO:0034554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_organization","termid":"PBO:0034554"}


id: GO:2000702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"regulation of FGF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of FGF receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of FGFR signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of fibroblast growth factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of fibroblast growth factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000702"}


id: MONDO:0008892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PFIC1, a type of progressive familial intrahepathic cholestasis (PFIC), is an infantile hereditary disorder in bile formation that is hepatocellular in origin and associated with extrahepatic features.","definition_xrefs":["Orphanet:79306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005066"],"is_obsolete":false,"name":"progressive familial intrahepatic cholestasis type 1","secondary_identifiers":["UMLS:C4551898","DOID:0070226","MEDGEN:1645830","icd11.foundation:1414850183","NANDO:1201043","OMIM:211600","GARD:9802"],"synonyms":[{"name":"Byler disease","type":"exact"},{"name":"Byler's disease","type":"related"},{"name":"FIC1 deficiency","type":"exact"},{"name":"PFIC1","type":"exact"},{"name":"cholestasis, fatal intrahepatic","type":"related"},{"name":"cholestasis, progressive familial intrahepatic 1","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 1","type":"related"},{"name":"cholestasis, progressive familial intrahepatic, type 1","type":"exact"},{"name":"progressive familial intrahepatic cholestasis","type":"related"},{"name":"severe ATP8B1 deficiency","type":"related"}],"termid":"MONDO:0008892","xrefs":{"Monarch":{"xref_id":"0008892"}}}


id: GO:0052119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near its host organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in host environment (obsolete GO:0052119)","synonyms":[{"name":"negative energy taxis in response to host environment","type":"exact"}],"termid":"GO:0052119"}


id: PBO:0078986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon CTA) 2-1","termid":"PBO:0078986"}


id: PBO:0050809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUNK antisense RNA 1","termid":"PBO:0050809"}


id: PBO:0059528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded 5S-like sequence","termid":"PBO:0059528"}


id: PBO:0030029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_adenylyl_cyclase_activity","termid":"PBO:0030029"}


id: MONDO:0800501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of conditions with varied degree of cognitive, language, behavioral, and motor regression associated with marked spike-wave activation in sleep. The regression is seen within weeks of the EEG pattern. This syndrome encompasses the previous syndromes epileptic encephalopathy with continuous spike-wave in sleep and atypical childhood epilepsy with centrotemporal spikes (also previously known as pseudo-Lennox syndrome and atypical benign partial epilepsy). Landau–Kleffner syndrome is a specific subtype of EE-SWAS, where regression affects mainly language, with an acquired auditory agnosia.","direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome with developmental and/or epileptic encephalopathy","termid":"MONDO:0800500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"developmental and/or epileptic encephalopathy with spike-wave activation in sleep","synonyms":[{"name":"DEE-SWAS","type":"exact"},{"name":"EE-SWAS","type":"exact"}],"termid":"MONDO:0800501","xrefs":{"Monarch":{"xref_id":"0800501"}}}


id: PBO:0044396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 56, pseudogene","termid":"PBO:0044396"}


id: GO:1903604
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96288,109413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903607"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cytochrome.","definition_xrefs":["GO_REF:0000068","PMID:19721088","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytochrome metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-211958"],"synonyms":[{"name":"cytochrome metabolism","type":"exact"}],"termid":"GO:1903604","terms_by_termid":{"GO:1903607":null}}


id: PBO:0085395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane P2-type H+-ATPase; pumps protons out of cell; major regulator of cytoplasmic pH and plasma membrane potential; long-lived hexameric protein asymmetrically distributed at plasma membrane between mother cells and buds; accumulates at high levels in mother cells during aging, buds emerge with very low levels of Pma1p, newborn cells have low levels of Pma1p; Hsp30p plays a role in Pma1p regulation; interactions with Std1p appear to propagate [GAR+]","termid":"PBO:0085395"}


id: PBO:0052435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin light chain 2","termid":"PBO:0052435"}


id: PBO:0016996
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP U2 Auxiliary Factor","termid":"PBO:0016996"}


id: PBO:0002528
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.65","termid":"PBO:0002528"}


id: PBO:0000706
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.19","termid":"PBO:0000706"}


id: GO:0035277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a spiracle are generated and organized. Spiracles are the openings in the insect open tracheal system; externally they connect to the epidermis and internally they connect to the tracheal trunk.","definition_xrefs":["PMID:10491268","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spiracle morphogenesis, open tracheal system","synonyms":[{"name":"spiracle morphogenesis","type":"exact"}],"termid":"GO:0035277"}


id: PBO:0031729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_recombination","termid":"PBO:0031729"}


id: GO:0141150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of nitric oxide-cGMP mediated signal transduction.","definition_xrefs":["PMID:14615391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nitric oxide mediated signal transduction","termid":"GO:0010750"},{"relation_name":"is_a","term_name":"positive regulation of cGMP-mediated signaling","termid":"GO:0010753"},{"relation_name":"is_a","term_name":"regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141149"},{"relation_name":"positively_regulates","term_name":"nitric oxide-cGMP-mediated signaling","termid":"GO:0038060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141150"}


id: GO:0099052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The membrane scission process that is the final step in the formation of a clathrin-coated endocytic vesicle: separation from the plasma membrane.","definition_xrefs":["PMID:21779028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle scission involved in endocytosis","termid":"GO:0099051"},{"relation_name":"part_of","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"vesicle scission involved in clathrin-mediated endocytosis","termid":"GO:0099052"}


id: PBO:0039122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allograft inflammatory factor 1 like","termid":"PBO:0039122"}


id: GO:0032610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-1 alpha due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-1 alpha production","secondary_identifiers":["GO:0050719","GO:0050703"],"synonyms":[{"name":"IL-1 alpha production","type":"exact"},{"name":"interleukin-1 alpha biosynthetic process","type":"narrow"},{"name":"interleukin-1 alpha secretion","type":"narrow"}],"termid":"GO:0032610"}


id: PBO:0064918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 3A","termid":"PBO:0064918"}


id: MONDO:0017801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical Meigs syndrome","secondary_identifiers":["Orphanet:314466","GARD:21374","UMLS:C5190605","MEDGEN:1676202"],"synonyms":[{"name":"atypical Demons-Meigs syndrome","type":"exact"},{"name":"incomplete Meigs syndrome","type":"exact"}],"termid":"MONDO:0017801","xrefs":{"Monarch":{"xref_id":"0017801"}}}


id: FYPO:0004678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated 25S rRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased polyadenylated 25S rRNA level","synonyms":[{"name":"increased mature polyadenylated 25S rRNA transcript level","type":"exact"},{"name":"increased polyadenylated 25S rRNA accumulation","type":"related"},{"name":"increased polyadenylated 25S rRNA level during mitotic cell cycle","type":"related"},{"name":"increased polyadenylated 25S rRNA level during vegetative growth","type":"exact"},{"name":"increased polyadenylated 25S rRNA transcript level","type":"exact"}],"termid":"FYPO:0004678"}


id: MONDO:1010465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus arteriosus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent ductus arteriosus, non-human animal","termid":"MONDO:1010017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus arteriosus, dog","secondary_identifiers":["OMIA:000779-9615"],"termid":"MONDO:1010465","xrefs":{"Monarch":{"xref_id":"1010465"}}}


id: PBO:0075221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNW domain containing 1","termid":"PBO:0075221"}


id: GO:0048703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the viscerocranium are generated and organized during the embryonic phase. The viscerocranium is the part of the skull comprising the facial bones.","definition_xrefs":["GOC:jid","GOC:dsf","PMID:16049113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic cranial skeleton morphogenesis","termid":"GO:0048701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic viscerocranium morphogenesis","synonyms":[{"name":"embryonic pharyngeal skeleton morphogenesis","type":"exact"}],"termid":"GO:0048703"}


id: GO:0120020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes cholesterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GOC:krc","PMID:20823909","PMID:24220498","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transfer activity","termid":"GO:0120015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0120013"],"is_obsolete":false,"name":"cholesterol transfer activity","secondary_identifiers":["Reactome:R-HSA-265443","Reactome:R-HSA-8951850","Reactome:R-HSA-5682111","Reactome:R-HSA-216723","Reactome:R-HSA-266082","GO:0017127","Reactome:R-HSA-1454928","Reactome:R-HSA-265545"],"synonyms":[{"name":"cholesterol carrier activity","type":"exact"},{"name":"cholesterol transporter activity","type":"broad"},{"name":"intermembrane cholesterol transfer activity","type":"narrow"}],"termid":"GO:0120020"}


id: PBO:0053047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP4 pseudogene","termid":"PBO:0053047"}


id: PBO:0005349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S37 (predicted)","termid":"PBO:0005349"}


id: GO:0031739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cholecystokinin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cholecystokinin receptor binding","synonyms":[{"name":"cholecystokinin receptor ligand","type":"narrow"}],"termid":"GO:0031739"}


id: MONDO:0045030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease","termid":"MONDO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"non-infectious diarrheal disease","secondary_identifiers":["MEDGEN:540680","SCTID:69980003","UMLS:C0267436"],"synonyms":[{"name":"non-infective diarrhea","type":"exact"},{"name":"non-infective diarrhoea","type":"exact"},{"name":"presumed non-infectious diarrhea","type":"related"},{"name":"presumed non-infectious diarrhoea","type":"related"}],"termid":"MONDO:0045030","xrefs":{"Monarch":{"xref_id":"0045030"}}}


id: MONDO:8000001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discitis caused by infection with Staphylococcus.","definition_xrefs":["PMID:27070599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"},{"relation_name":"is_a","term_name":"staphylococcus aureus infection","termid":"MONDO:0005545"},{"relation_name":"is_a","term_name":"infectious discitis","termid":"MONDO:8000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcus discitis","termid":"MONDO:8000001","xrefs":{"Monarch":{"xref_id":"8000001"}}}


id: PATO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of being covered with short, dense, matted hairs.","definition_xrefs":["thefreedictionary:www.thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tomentose","termid":"PATO:0002341"}


id: FYPO:0001674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"abnormal alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0001674"}


id: GO:0015055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with secretin to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"secretin receptor activity","termid":"GO:0015055"}


id: GO:1902936
data:
  {"annotated_genes":["SJAG_00115","SJAG_04963","SJAG_05179","SJAG_02166","SJAG_00118","SJAG_00117","SJAG_01143","SJAG_02613","SJAG_04960","SJAG_01748","SJAG_01783","SJAG_04644","SJAG_02572","SJAG_00152","SJAG_02657","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75153,73577,81660,79524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[63837,119030,116868,103666,119524,120989,92575,74346,108526,101168,89803,75382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol bisphosphate.","definition_xrefs":["GOC:bhm","GO_REF:0000067","GOC:TermGenie","PMID:18690034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00117":null,"SJAG_00118":null,"SJAG_00152":null,"SJAG_00368":null,"SJAG_01143":null,"SJAG_01748":null,"SJAG_01783":null,"SJAG_02166":null,"SJAG_02572":null,"SJAG_02613":null,"SJAG_02657":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_04963":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol bisphosphate binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1902936","terms_by_termid":{"GO:0005546":null,"GO:0080025":null}}


id: PBO:0057283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR503 host gene","termid":"PBO:0057283"}


id: PBO:0048780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 11","termid":"PBO:0048780"}


id: GO:0051609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of a neurotransmitter into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"inhibition of neurotransmitter uptake","synonyms":[{"name":"inhibition of neurotransmitter import","type":"exact"}],"termid":"GO:0051609"}


id: PBO:0054757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2168","termid":"PBO:0054757"}


id: FYPO:0003087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at a replication fork barrier in the mating-type region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin binding at mating-type region replication fork barrier","termid":"FYPO:0003087"}


id: FYPO:0005533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 at the IRC1L boundary element occurs to a lower extent than normal.","definition_xrefs":["PMID:25972440","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone acetylation during vegetative growth","termid":"FYPO:0000331"},{"relation_name":"is_a","term_name":"abnormal histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0005532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H4-K16 acetylation at boundary element IRC1L during vegetative growth","synonyms":[{"name":"decreased histone H4-K16 acetylation at boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"decreased histone H4K16 acetylation at centromeric boundary element IRC1L during vegetative growth","type":"exact"},{"name":"reduced histone H4-K16 acetylation at boundary element IRC1L during vegetative growth","type":"exact"}],"termid":"FYPO:0005533"}


id: PATO:0000362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000362 direction value (obsolete PATO:0000362)","termid":"PATO:0000362"}


id: MONDO:0012182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, rhizomelic, with retinitis pigmentosa","secondary_identifiers":["MEDGEN:332318","UMLS:C1836898","MESH:C563806","OMIM:609047"],"synonyms":[{"name":"skeletal dysplasia, rhizomelic, with retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0012182","xrefs":{"Monarch":{"xref_id":"0012182"}}}


id: GO:0004022
data:
  {"annotated_genes":["SJAG_01869","SJAG_03196","SJAG_00240","SJAG_03370","SJAG_01457","SJAG_01414","SJAG_03822","SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72908,79919],"is_not":false,"summary":null,"term":"GO:0004022"},{"annotations":[116597,100607,100608,116596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120542"},{"annotations":[93656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047018"},{"annotations":[74372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003939"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+.","definition_xrefs":["EC:1.1.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase [NAD(P)+] activity","termid":"GO:0018455"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00240":null,"SJAG_01414":null,"SJAG_01457":null,"SJAG_01869":null,"SJAG_03196":null,"SJAG_03370":null,"SJAG_03822":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alcohol dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-71707","Reactome:R-HSA-2162078"],"synonyms":[{"name":"ADH","type":"related"},{"name":"NAD-dependent alcohol dehydrogenase","type":"related"},{"name":"NAD-specific aromatic alcohol dehydrogenase","type":"related"},{"name":"NADH-alcohol dehydrogenase","type":"related"},{"name":"NADH-aldehyde dehydrogenase","type":"related"},{"name":"alcohol dehydrogenase activity","type":"broad"},{"name":"alcohol:NAD+ oxidoreductase","type":"related"},{"name":"aldehyde dehydrogenase (NAD) activity","type":"narrow"},{"name":"aldo-keto reductase (NAD) activity","type":"exact"},{"name":"aliphatic alcohol dehydrogenase","type":"narrow"},{"name":"ethanol dehydrogenase","type":"narrow"},{"name":"primary alcohol dehydrogenase","type":"broad"},{"name":"yeast alcohol dehydrogenase","type":"narrow"}],"termid":"GO:0004022","terms_by_termid":{"GO:0003939":null,"GO:0004022":null,"GO:0047018":null,"GO:0120542":null}}


id: GO:0070273
data:
  {"annotated_genes":["SJAG_01945","SJAG_01516","SJAG_01769","SJAG_04077","SJAG_03705","SJAG_00663","SJAG_05179"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79360,96364,101169,102010,104324,114467,119904],"is_not":false,"summary":null,"term":"GO:0070273"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-4-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 4' position.","definition_xrefs":["GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01516":null,"SJAG_01769":null,"SJAG_01945":null,"SJAG_03705":null,"SJAG_04077":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070273","terms_by_termid":{"GO:0070273":null}}


id: PBO:0010216
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related to S. pombe SPAC521.02 and S. cerevisiae YHR134W, but has an additional N-terminal ubiquitin family domain","termid":"PBO:0010216"}


id: GO:0005199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of cell wall","termid":"GO:0005199"}


id: MONDO:0009074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Facial dysmorphism-macrocephaly-myopia-Dandy-Walker malformation syndrome is characterized by Dandy-Walker malformation, severe intellectual deficit, macrocephaly, brachytelephalangy, facial dysmorphism and severe myopia. Three cases have been described. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:1970"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"facial dysmorphism-macrocephaly-myopia-Dandy-Walker malformation syndrome","secondary_identifiers":["OMIM:220219","MESH:C535985","GARD:2222","UMLS:C1857352","MEDGEN:341752"],"synonyms":[{"name":"Dandy-Walker malformation with intellectual disability, macrocephaly, myopia, and BRACHYTELEPHALANGY","type":"related"},{"name":"Dandy-Walker malformation with mental retardation, macrocephaly, myopia, and BRACHYTELEPHALANGY","type":"related"}],"termid":"MONDO:0009074","xrefs":{"Monarch":{"xref_id":"0009074"}}}


id: PBO:0043165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIDEC pseudogene 2","termid":"PBO:0043165"}


id: PR:P27638
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P27638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase spk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.09c","synonyms":[{"name":"MAP kinase spk1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAPK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spk1","type":"exact"}],"termid":"PR:P27638"}


id: GO:0061383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of shaping a trabecula in an organ. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trabecula morphogenesis","termid":"GO:0061383"}


id: PATO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viscosity which relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"viscous","termid":"PATO:0000998"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased viscosity","synonyms":[{"name":"low viscosity","type":"exact"}],"termid":"PATO:0001694"}


id: PBO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrogen/potassium transport system protein (predicted)","termid":"PBO:0001587"}


id: FYECO:0000385
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which fluconazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ fluconazole","termid":"FYECO:0000385"}


id: PBO:0069507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 775, pseudogene","termid":"PBO:0069507"}


id: MONDO:0001982
data:
  {"annotated_genes":["SJAG_00570","SJAG_01407"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[88016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[88009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"}]},"cv_name":"mondo","definition":"A group of inherited, severe metabolic disorders in which sphingomyelin accumulates in lysosomes in cells. The lysosomes normally transport material through and out of the cell.","definition_xrefs":["Wikipedia:Niemann%E2%80%93Pick_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"},{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_01407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0002561","MONDO:0005046"],"is_obsolete":false,"name":"Niemann-Pick disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D009542","icd11.foundation:398872780","NANDO:2200561","UMLS:C0028064","SCTID:58459009","DOID:14504","EFO:1001380","NCIT:C61269","GARD:13334","MEDGEN:10348"],"synonyms":[{"name":"Niemann-Pick disease with cholesterol esterification block","type":"exact"},{"name":"Niemann-Pick disease, subacute juvenile form","type":"exact"},{"name":"lipoid histiocytosis","type":"exact"},{"name":"lipoid histiocytosis (classical phosphatide)","type":"exact"},{"name":"sphingomyelin lipidosis","type":"exact"},{"name":"sphingomyelin/cholesterol lipidosis","type":"exact"},{"name":"sphingomyelinase deficiency disease","type":"exact"},{"name":"type A Niemann-Pick disease","type":"narrow"}],"termid":"MONDO:0001982","terms_by_termid":{"MONDO:0009756":null,"MONDO:0011871":null,"MONDO:0011873":null},"xrefs":{"Monarch":{"xref_id":"0001982"}}}


id: GO:0009738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the binding of the plant hormone abscisic acid (ABA) to a receptor, and ending with modulation of a cellular process, e.g. transcription.","definition_xrefs":["GOC:sm","GOC:signaling","PMID:24269821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to abscisic acid stimulus","termid":"GO:0071215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"abscisic acid-activated signaling pathway","synonyms":[{"name":"ABA signal transduction","type":"exact"},{"name":"ABA signaling","type":"exact"},{"name":"abscisic acid mediated signalling","type":"exact"},{"name":"abscisic acid signal transduction","type":"related"},{"name":"abscisic acid-mediated signaling pathway","type":"related"}],"termid":"GO:0009738"}


id: MONDO:0100524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of disorders that includes Farber disease and spinal muscular atrophy with progressive myoclonic epilepsy. Both disorders are caused by mutations in the ASAH1 gene that encodes the lysosomal hydrolase that breaks down the bioactive lipid, ceramide.","definition_xrefs":["PMID:30029679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"ASAH1-related sphingolipidosis","synonyms":[{"name":"acid ceramidase deficiency","type":"narrow"}],"termid":"MONDO:0100524","xrefs":{"Monarch":{"xref_id":"0100524"}}}


id: PBO:0034613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_occupancy_at_centromere_central_core","termid":"PBO:0034613"}


id: MONDO:0006824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma having known association to krebs2 gene mutation","definition_xrefs":["EFO:1001007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Krebs 2 carcinoma","secondary_identifiers":["MESH:D002287","UMLS:C0007128","MEDGEN:2842"],"termid":"MONDO:0006824","xrefs":{"Monarch":{"xref_id":"0006824"}}}


id: GO:0045748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or enforces the correct R8 cell spacing in a compound eye.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R8 cell spacing in compound eye","termid":"GO:0045468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of R8 cell spacing in compound eye","synonyms":[{"name":"activation of R8 spacing","type":"narrow"},{"name":"positive regulation of R8 spacing","type":"exact"},{"name":"stimulation of R8 spacing","type":"narrow"},{"name":"up regulation of R8 spacing","type":"exact"},{"name":"up-regulation of R8 spacing","type":"exact"},{"name":"upregulation of R8 spacing","type":"exact"}],"termid":"GO:0045748"}


id: PR:Q9UUN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC297.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUN3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C297.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.06c","synonyms":[{"name":"Spom972h-SPCC297.06c","type":"exact"}],"termid":"PR:Q9UUN3"}


id: MONDO:0010680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of Emery-Dreifuss muscular dystrophy.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"Emery-Dreifuss muscular dystrophy","termid":"MONDO:0016830"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267"],"is_obsolete":false,"name":"X-linked Emery-Dreifuss muscular dystrophy","secondary_identifiers":["UMLS:C0751337","MEDGEN:148284","Orphanet:98863","MESH:D000083143","GARD:2102"],"synonyms":[{"name":"Emerinopathy","type":"exact"},{"name":"Emery-Dreifuss muscular dystrophy, X-linked","type":"exact"},{"name":"X-linked Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"muscular dystrophy, tardive Emery-Dreifuss type, with contractures","type":"related"},{"name":"muscular dystrophy, tardive, Dreifuss-Emery type, with contractures","type":"related"}],"termid":"MONDO:0010680","xrefs":{"Monarch":{"xref_id":"0010680"}}}


id: PBO:0089548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-8 family plus-end directed microtubule motor Klp6","termid":"PBO:0089548"}


id: PBO:0064983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich acidic protein 1","termid":"PBO:0064983"}


id: PBO:0041135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 18","termid":"PBO:0041135"}


id: GO:0080046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to the 4'-hydroxy group of a quercetin molecule.","definition_xrefs":["PMID:15352060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"quercetin 4'-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-10788"],"termid":"GO:0080046"}


id: PR:Q9UR06
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmf2 gene.","definition_xrefs":["UniProtKB:Q9UR06","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mmf2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.10","synonyms":[{"name":"Spom972h-mmf2","type":"exact"},{"name":"maintenance of mitochondrial function 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR06"}


id: PR:Q9Y7U9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cca2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7U9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCA tRNA nucleotidyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.10","synonyms":[{"name":"CCA-adding enzyme 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cca2","type":"exact"},{"name":"tRNA CCA-pyrophosphorylase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA adenylyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA nucleotidyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7U9"}


id: PBO:0054805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2218","termid":"PBO:0054805"}


id: PBO:0027241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_binucleate_aseptate_cell","termid":"PBO:0027241"}


id: GO:0002494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid antigen into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:add","PMID:15928678","PMID:15928680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"part_of","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lipid antigen transport","termid":"GO:0002494"}


id: GO:0030671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-coated phagocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated endocytic vesicle membrane","termid":"GO:0030669"},{"relation_name":"is_a","term_name":"phagocytic vesicle membrane","termid":"GO:0030670"},{"relation_name":"part_of","term_name":"clathrin-coated phagocytic vesicle","termid":"GO:0045336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-coated phagocytic vesicle membrane","termid":"GO:0030671"}


id: PBO:0038621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACER2 pseudogene 1","termid":"PBO:0038621"}


id: SO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop_gained (SO:0001587) variant that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_gained","termid":"SO:0001587"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_gained_NMD_triggering","synonyms":[{"name":"stop gained variant-nonsense-mediated decay triggering","type":"exact"},{"name":"stop gained-NMD triggering","type":"exact"}],"termid":"SO:0002321"}


id: PBO:0072872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB homeobox 2","termid":"PBO:0072872"}


id: GO:0034240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or decreases the frequency, rate or extent of macrophage fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage fusion","termid":"GO:0034239"},{"relation_name":"is_a","term_name":"negative regulation of syncytium formation by plasma membrane fusion","termid":"GO:0034242"},{"relation_name":"negatively_regulates","term_name":"macrophage fusion","termid":"GO:0034238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage fusion","termid":"GO:0034240"}


id: FYPO:0001270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation results in the separation of chromosomes into two distinct unequal masses, located at or near the ends of an elongated mitotic spindle.","definition_xrefs":["PMID:22711988","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal mitotic sister chromatid segregation","termid":"FYPO:0003241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000337","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"complete but unequal mitotic sister chromatid segregation","synonyms":[{"name":"aneuploidy","type":"related"},{"name":"complete but unequal mitotic chromosome segregation","type":"exact"},{"name":"complete but unequal mitotic sister chromatid separation","type":"related"},{"name":"complete but unequal mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"complete but unequal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001270"}


id: PBO:0057865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3176","termid":"PBO:0057865"}


id: MONDO:0008568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone plasma membrane transport defect","secondary_identifiers":["OMIM:188560","MEDGEN:396060","MESH:C536916","UMLS:C1861101"],"synonyms":[{"name":"hyperthyroxinemia, Eumetabolic, due to T4 plasma Membrane Transport defect","type":"exact"},{"name":"thyroid hormone plasma membrane transport defect","type":"exact"},{"name":"thyroid hormone resistance due to T4 plasma Membrane transport defect","type":"exact"}],"termid":"MONDO:0008568","xrefs":{"Monarch":{"xref_id":"0008568"}}}


id: GO:0060680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of a ureteric bud.","definition_xrefs":["GOC:dph","PMID:16916378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sprouting from an epithelium","termid":"GO:0060601"},{"relation_name":"part_of","term_name":"branching involved in ureteric bud morphogenesis","termid":"GO:0001658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting involved in ureteric bud morphogenesis","termid":"GO:0060680"}


id: PBO:0041271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 3","termid":"PBO:0041271"}


id: RO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x 'has starts location' y if and only if there exists some process z such that x 'starts with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_start_location","termid":"RO:0002231"}


id: PR:O43075
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translational activator of cytochrome c oxidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein C8D2.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.12c","secondary_identifiers":["UniProtKB:O43075"],"synonyms":[{"name":"Spom972h-TACO1","type":"exact"}],"termid":"PR:O43075"}


id: PBO:0076782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tec protein tyrosine kinase","termid":"PBO:0076782"}


id: PBO:0034324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_developmental_potential_involving","termid":"PBO:0034324"}


id: GO:0018120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to peptidyl-arginine to form omega-N-(ADP-ribosyl)-L-arginine.","definition_xrefs":["RESID:AA0168"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-arginine ADP-ribosylation (obsolete GO:0018120)","termid":"GO:0018120"}


id: PBO:0065120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C zeta","termid":"PBO:0065120"}


id: GO:0018601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-nitrophenol + H+ + NADH + O2 = 4-nitrocatechol + H2O + NAD+.","definition_xrefs":["RHEA:12568","EC:1.14.13.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-nitrophenol 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R03023","UM-BBD_reactionID:r0230","MetaCyc:4-NITROPHENOL-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"4-nitrophenol hydroxylase activity","type":"related"},{"name":"4-nitrophenol,NADH:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"4-nitrophenol-2-hydroxylase activity","type":"related"}],"termid":"GO:0018601"}


id: PBO:0011973
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae COQ2","termid":"PBO:0011973"}


id: MONDO:0024864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"posterior uveal melanoma","termid":"MONDO:0003927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"medium/large size posterior uveal melanoma","secondary_identifiers":["UMLS:C0278868","MEDGEN:124525","NCIT:C9090"],"synonyms":[{"name":"medium/large size posterior uveal melanoma","type":"exact"}],"termid":"MONDO:0024864","xrefs":{"Monarch":{"xref_id":"0024864"}}}


id: PATO:0000349
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000349 carbohydrate composition value (obsolete PATO:0000349)","termid":"PATO:0000349"}


id: PBO:0084628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methylglyoxalase that converts methylglyoxal to D-lactate; involved in oxidative stress resistance, diauxic shift, and stationary phase survival; has similarity to E. coli Hsp31 and C. albicans Glx3p; member of the DJ-1/ThiJ/PfpI superfamily, which includes human DJ-1 involved in Parkinson's disease and cancer; exists as a dimer and contains a putative metal-binding site; protein abundance increases in response to DNA replication stress","termid":"PBO:0084628"}


id: GO:0036064
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-tethered, short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum) that is similar in structure to a centriole and derives from it. The cilium basal body is the site of assembly and remodeling of the cilium and serves as a nucleation site for axoneme growth. As well as anchoring the cilium, it is thought to provide a selective gateway regulating the entry of ciliary proteins and vesicles by intraflagellar transport.","definition_xrefs":["GOC:clt","GOC:cilia","PMID:21750193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"ciliary basal body","secondary_identifiers":["GO:0005932","NIF_Subcellular:sao11978067"],"synonyms":[{"name":"basal body","type":"broad"},{"name":"cilial basal body","type":"exact"},{"name":"cilium basal body","type":"exact"},{"name":"kinetosome","type":"exact"},{"name":"microtubule basal body","type":"exact"}],"termid":"GO:0036064"}


id: MONDO:0012111
data:
  {"annotated_genes":["SJAG_00228"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88268],"is_not":false,"summary":null,"term":"MONDO:0012111"}]},"cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the MYL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C563866","MEDGEN:324806","OMIM:608751","DOID:0110314","UMLS:C1837471"],"synonyms":[{"name":"CMH8","type":"related"},{"name":"MYL3 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy hypertrophic mid-left ventricular chamber type 1","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 8","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, type 8","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 8","type":"exact"},{"name":"cardiomyopathy, hypertrophic, mid-left ventricular chamber type, 1","type":"related"},{"name":"hypertrophic cardiomyopathy 8","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in MYL3","type":"exact"},{"name":"hypertrophic cardiomyopathy type 8","type":"exact"}],"termid":"MONDO:0012111","terms_by_termid":{"MONDO:0012111":null},"xrefs":{"Monarch":{"xref_id":"0012111"}}}


id: MONDO:0004257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mixed germ cell tumor that arises from the central nervous system and occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood central nervous system germ cell tumor","termid":"MONDO:0003750"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"},{"relation_name":"is_a","term_name":"mixed germ cell tumor of central nervous system","termid":"MONDO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood central nervous system mixed germ cell tumor","secondary_identifiers":["DOID:7516","MEDGEN:232346","NCIT:C27403","UMLS:C1332956"],"synonyms":[{"name":"Central nervous system Mixed germ cell tumor","type":"exact"},{"name":"Central nervous system Mixed germ cell tumour","type":"exact"},{"name":"childhood mixed germ cell tumor of central nervous system","type":"exact"},{"name":"childhood mixed germ cell tumour of central nervous system","type":"exact"},{"name":"mixed germ cell tumor of central nervous system of childhood","type":"exact"},{"name":"mixed germ cell tumour of central nervous system of childhood","type":"exact"},{"name":"paediatric mixed germ cell tumour of central nervous system","type":"exact"},{"name":"pediatric mixed germ cell tumor of central nervous system","type":"exact"}],"termid":"MONDO:0004257","xrefs":{"Monarch":{"xref_id":"0004257"}}}


id: MONDO:0100133
data:
  {"annotated_genes":["SJAG_03782","SJAG_01368","SJAG_04639","SJAG_01820","SJAG_00217"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032617"},{"annotations":[88065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032630"},{"annotations":[88067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032631"},{"annotations":[88053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032609"},{"annotations":[88056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032612"}]},"cv_name":"mondo","definition":"A type of mitochondrial disease charcterized by macrocephaly (large head) with progressive leukodystrophy, encephalopathy, hypertrophic cardiomyopathy, myopathy, liver disease, Leigh syndrome, Leber hereditary optic neuropathy, and some forms of Parkinson disease. The disease is caused by mutations in any of many genes and the inheritance pattern depends on the responsible gene.","definition_xrefs":["GARD:0003908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00217":null,"SJAG_01368":null,"SJAG_01820":null,"SJAG_03782":null,"SJAG_04639":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex I deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537475","MEDGEN:374101","NANDO:1200180","Orphanet:2609","GARD:3908","DOID:0060536","UMLS:C1838979"],"synonyms":[{"name":"NADH coenzyme Q reductase deficiency","type":"exact"},{"name":"complex 1 mitochondrial respiratory chain deficiency","type":"exact"},{"name":"isolated NADH-CoQ reductase deficiency","type":"exact"},{"name":"isolated NADH-coenzyme Q reductase deficiency","type":"exact"},{"name":"isolated NADH-ubiquinone reductase deficiency","type":"exact"},{"name":"isolated complex I deficiency","type":"exact"},{"name":"isolated mitochondrial respiratory chain complex I deficiency","type":"exact"}],"termid":"MONDO:0100133","terms_by_termid":{"MONDO:0032609":null,"MONDO:0032612":null,"MONDO:0032617":null,"MONDO:0032630":null,"MONDO:0032631":null},"xrefs":{"Monarch":{"xref_id":"0100133"}}}


id: PR:O74386
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methyltransferase-like protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C3H7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.11","secondary_identifiers":["UniProtKB:O74386"],"synonyms":[{"name":"Spom972h-METTL6","type":"exact"}],"termid":"PR:O74386"}


id: PR:O59678
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis regulatory protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR17602:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis regulatory protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.16","secondary_identifiers":["UniProtKB:O59678"],"synonyms":[{"name":"Spom972h-RRS1","type":"exact"}],"termid":"PR:O59678"}


id: PBO:0067430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 551, pseudogene","termid":"PBO:0067430"}


id: GO:0070397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan.","definition_xrefs":["GOC:add","PMID:16020688","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wall teichoic acid metabolic process","synonyms":[{"name":"WTA metabolic process","type":"exact"},{"name":"wall teichoic acid metabolism","type":"exact"}],"termid":"GO:0070397"}


id: PBO:0071253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 94","termid":"PBO:0071253"}


id: MONDO:0008408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"scapuloperoneal spinal muscular atrophy, autosomal dominant","secondary_identifiers":["Orphanet:431255","DOID:0111552","ICD9:335.19","MEDGEN:148283","SCTID:230248006","UMLS:C0751335","EFO:1001992","GARD:10314","OMIM:181405"],"synonyms":[{"name":"SPSMA","type":"exact"},{"name":"amyotrophy, neurogenic scapuloperoneal, New England type","type":"related"},{"name":"neurogenic scapuloperoneal amyotrophy, New England type","type":"exact"},{"name":"scapuloperoneal neuronopathy","type":"exact"},{"name":"scapuloperoneal spinal muscular atrophy","type":"exact"}],"termid":"MONDO:0008408","xrefs":{"Monarch":{"xref_id":"0008408"}}}


id: GO:0042993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription factor import into nucleus (obsolete GO:0042993)","synonyms":[{"name":"activation of transcription factor import into nucleus","type":"narrow"},{"name":"positive regulation of transcription factor import into cell nucleus","type":"exact"},{"name":"positive regulation of transcription factor transport from cytoplasm to nucleus","type":"exact"},{"name":"positive regulation of transcription factor-nucleus import","type":"exact"},{"name":"stimulation of transcription factor import into nucleus","type":"narrow"},{"name":"up regulation of transcription factor import into nucleus","type":"exact"},{"name":"up-regulation of transcription factor import into nucleus","type":"exact"},{"name":"upregulation of transcription factor import into nucleus","type":"exact"}],"termid":"GO:0042993"}


id: PBO:0006549
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YLL013C","termid":"PBO:0006549"}


id: MONDO:0000071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myopathy, myofibrillar (obsolete MONDO:0000071)","termid":"MONDO:0000071","xrefs":{"Monarch":{"xref_id":"0000071"}}}


id: PBO:0050949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha and beta receptor subunit 1","termid":"PBO:0050949"}


id: PBO:0036283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate kinase Arg82 (predicted)","termid":"PBO:0036283"}


id: PBO:0071469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 10","termid":"PBO:0071469"}


id: GO:0004336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosyl-N-acylsphingosine + H2O = D-galactose + N-acylsphingosine.","definition_xrefs":["EC:3.2.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramidase activity","termid":"GO:0017042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"galactosylceramidase activity","secondary_identifiers":["RHEA:14297","Reactome:R-HSA-1606564","MetaCyc:GALACTOSYLCERAMIDASE-RXN"],"synonyms":[{"name":"D-galactosyl-N-acylsphingosine galactohydrolase activity","type":"related"},{"name":"beta-galactocerebrosidase activity","type":"related"},{"name":"beta-galactosylceramidase activity","type":"related"},{"name":"ceramide galactosidase activity","type":"related"},{"name":"cerebroside beta-galactosidase activity","type":"related"},{"name":"cerebroside galactosidase activity","type":"related"},{"name":"galactocerebrosidase activity","type":"related"},{"name":"galactocerebroside beta-galactosidase activity","type":"related"},{"name":"galactocerebroside galactosidase activity","type":"related"},{"name":"galactocerebroside-beta-D-galactosidase activity","type":"related"},{"name":"galactosylceramidase I","type":"related"},{"name":"galactosylceramide beta-galactosidase activity","type":"related"},{"name":"galactosylcerebrosidase activity","type":"related"},{"name":"galcerase activity","type":"related"},{"name":"lactosylceramidase I","type":"related"},{"name":"lactosylceramidase activity","type":"related"}],"termid":"GO:0004336"}


id: GO:1900179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aflatoxin biosynthetic process.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of aflatoxin biosynthetic process","termid":"GO:1900177"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"aflatoxin biosynthetic process","termid":"GO:0045122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of aflatoxin biosynthetic process","synonyms":[{"name":"activation of aflatoxin anabolism","type":"narrow"},{"name":"activation of aflatoxin biosynthesis","type":"narrow"},{"name":"activation of aflatoxin biosynthetic process","type":"narrow"},{"name":"activation of aflatoxin formation","type":"narrow"},{"name":"activation of aflatoxin synthesis","type":"narrow"},{"name":"positive regulation of aflatoxin anabolism","type":"exact"},{"name":"positive regulation of aflatoxin biosynthesis","type":"exact"},{"name":"positive regulation of aflatoxin formation","type":"exact"},{"name":"positive regulation of aflatoxin synthesis","type":"exact"},{"name":"up regulation of aflatoxin anabolism","type":"exact"},{"name":"up regulation of aflatoxin biosynthesis","type":"exact"},{"name":"up regulation of aflatoxin biosynthetic process","type":"exact"},{"name":"up regulation of aflatoxin formation","type":"exact"},{"name":"up regulation of aflatoxin synthesis","type":"exact"},{"name":"up-regulation of aflatoxin anabolism","type":"exact"},{"name":"up-regulation of aflatoxin biosynthesis","type":"exact"},{"name":"up-regulation of aflatoxin biosynthetic process","type":"exact"},{"name":"up-regulation of aflatoxin formation","type":"exact"},{"name":"up-regulation of aflatoxin synthesis","type":"exact"},{"name":"upregulation of aflatoxin anabolism","type":"exact"},{"name":"upregulation of aflatoxin biosynthesis","type":"exact"},{"name":"upregulation of aflatoxin biosynthetic process","type":"exact"},{"name":"upregulation of aflatoxin formation","type":"exact"},{"name":"upregulation of aflatoxin synthesis","type":"exact"}],"termid":"GO:1900179"}


id: MONDO:0021131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymal tumor affecting the frontal lobe of the brain.","definition_xrefs":["NCIT:C131573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal lobe neoplasm","termid":"MONDO:0001421"},{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"ependymal tumor of brain","termid":"MONDO:0004245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"frontal lobe ependymal tumor","secondary_identifiers":["MEDGEN:1391114","UMLS:C4330009"],"synonyms":[{"name":"ependymal tumor of frontal lobe","type":"exact"},{"name":"ependymal tumour of frontal lobe","type":"exact"},{"name":"frontal lobe ependymal tumor","type":"exact"}],"termid":"MONDO:0021131","xrefs":{"Monarch":{"xref_id":"0021131"}}}


id: PBO:0029120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate","termid":"PBO:0029120"}


id: SO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a half KB of the end of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"downstream_gene_variant","termid":"SO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"500B_downstream_variant","synonyms":[{"name":"500B downstream variant","type":"exact"},{"name":"near-gene-3","type":"exact"}],"termid":"SO:0001634"}


id: PBO:0090441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose and arabinose reductase","termid":"PBO:0090441"}


id: GO:0031236
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its periplasmic surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of external side of plasma membrane","termid":"GO:0031232"},{"relation_name":"part_of","term_name":"periplasmic side of plasma membrane","termid":"GO:0098567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0009986","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"extrinsic component of periplasmic side of plasma membrane","secondary_identifiers":["GO:0031238"],"synonyms":[{"name":"extrinsic to external leaflet of plasma membrane, in periplasmic space","type":"narrow"},{"name":"extrinsic to external side of plasma membrane, in periplasmic space","type":"narrow"}],"termid":"GO:0031236"}


id: PBO:0049846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEATR6 divergent transcript","termid":"PBO:0049846"}


id: GO:0051353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxidoreductase activity","secondary_identifiers":["GO:0009391"],"synonyms":[{"name":"activation of oxidoreductase activity","type":"narrow"},{"name":"oxidoreductase activator","type":"exact"},{"name":"ribonucleotide reductase activating enzyme activity","type":"narrow"},{"name":"stimulation of oxidoreductase activity","type":"narrow"},{"name":"up regulation of oxidoreductase activity","type":"exact"},{"name":"up-regulation of oxidoreductase activity","type":"exact"},{"name":"upregulation of oxidoreductase activity","type":"exact"}],"termid":"GO:0051353"}


id: GO:0033836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol = UDP + a flavonol 7-O-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"flavonol 7-O-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.237-RXN","RHEA:23164"],"synonyms":[{"name":"UDP-glucose:flavonol 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:flavonol 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0033836"}


id: PBO:0058825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8055","termid":"PBO:0058825"}


id: PBO:0046854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 2B, pseudogene","termid":"PBO:0046854"}


id: PBO:0079364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 5, pseudogene","termid":"PBO:0079364"}


id: FYPO:0003159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP (cAMP) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular cAMP level","termid":"FYPO:0001660"},{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"cAMP absent from cell","synonyms":[{"name":"cyclic AMP absent from cell","type":"exact"}],"termid":"FYPO:0003159"}


id: MONDO:0004675
data:
  {"annotated_genes":["SJAG_MIT04","SJAG_MIT13","SJAG_MIT03","SJAG_MIT20"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87962,87963,87964,87965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010789"}]},"cv_name":"mondo","definition":"A heterogenous group of disorders characterized by alterations of mitochondrial metabolism that result in muscle and nervous system dysfunction. These are often multisystemic and vary considerably in age at onset (usually in the first or second decade of life), distribution of affected muscles, severity, and course. (From Adams et al., Principles of Neurology, 6th ed, pp984-5)","definition_xrefs":["MESH:D017237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":4,"genes_by_uniquename":{"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial encephalomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:57960","SCTID:447292006","ICD9:277.87","DOID:890","UMLS:C0162666"],"termid":"MONDO:0004675","terms_by_termid":{"MONDO:0010789":null},"xrefs":{"Monarch":{"xref_id":"0004675"}}}


id: PBO:0090643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase (M phase inducer) Cdc25","termid":"PBO:0090643"}


id: PBO:0000527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G-protein signaling Rgs1","termid":"PBO:0000527"}


id: PBO:0004972
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.6","termid":"PBO:0004972"}


id: GO:0018127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(P)+ + L-serine = nicotinamide + N2-(ADP-D-ribosyl)-L-serine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)-serine ADP-ribosyltransferase activity (obsolete GO:0018127)","termid":"GO:0018127"}


id: PBO:0038720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 15","termid":"PBO:0038720"}


id: PBO:0088588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mre11 complex BRCT domain subunit Nbs1","termid":"PBO:0088588"}


id: FYPO:0003730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth on galactose carbon source","termid":"FYPO:0000251"},{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"abolished cell population growth on galactose carbon source","synonyms":[{"name":"abolished galactose utilization","type":"related"},{"name":"abolished growth on galactose carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on galactose carbon source","type":"exact"},{"name":"cell population growth on galactose carbon source abolished","type":"exact"}],"termid":"FYPO:0003730"}


id: MONDO:0019694
data:
  {"annotated_genes":["SJAG_00373","SJAG_01216","SJAG_00339","SJAG_02463","SJAG_04528","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008701"},{"annotations":[87017,87018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010966"},{"annotations":[88112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013223"},{"annotations":[88719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010013"},{"annotations":[86969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009593"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_00373":null,"SJAG_01216":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_04528":null},"genotype_count":0,"is_obsolete":false,"name":"spondylodysplastic dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843363","GARD:19193","Orphanet:93434","UMLS:C4736216","icd11.foundation:329165933"],"termid":"MONDO:0019694","terms_by_termid":{"MONDO:0008701":null,"MONDO:0009593":null,"MONDO:0010013":null,"MONDO:0010966":null,"MONDO:0013223":null},"xrefs":{"Monarch":{"xref_id":"0019694"}}}


id: PBO:0044180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNNBL1 pseudogene 1","termid":"PBO:0044180"}


id: FYPO:0001424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to nucleus during vegetative growth","synonyms":[{"name":"abolished protein localisation to nucleus during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during mitotic cell cycle","type":"related"},{"name":"nuclear exclusion during vegetative growth","type":"related"},{"name":"nuclear protein exclusion during vegetative growth","type":"related"},{"name":"protein localization to nucleus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001424"}


id: FYPO:0001411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfide (S2-, also called acid labile sulfide) measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"altered cellular sulfide level","synonyms":[{"name":"abnormal cellular sulfide accumulation","type":"related"},{"name":"abnormal cellular sulfide level","type":"exact"},{"name":"altered cellular acid labile sulfide level","type":"exact"},{"name":"altered cellular sulfide ion level","type":"exact"},{"name":"altered cellular sulfide level during mitotic cell cycle","type":"related"},{"name":"altered cellular sulfide level during vegetative growth","type":"exact"},{"name":"altered cellular sulphide level","type":"exact"}],"termid":"FYPO:0001411"}


id: PBO:0085205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer mitochondrial carnitine acetyltransferase; minor ethanol-inducible enzyme involved in transport of activated acyl groups from the cytoplasm into the mitochondrial matrix; phosphorylated","termid":"PBO:0085205"}


id: GO:0043737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage at apurinic or apyrimidinic sites to products with a 5'-phosphate.","definition_xrefs":["EC:3.1.21.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"deoxyribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.21.7-RXN"],"synonyms":[{"name":"DNase V activity","type":"related"},{"name":"Escherichia coli endodeoxyribonuclease V activity","type":"narrow"},{"name":"endodeoxyribonuclease V","type":"exact"},{"name":"endonuclease V activity","type":"broad"}],"termid":"GO:0043737"}


id: GO:1903816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collecting lymphatic vessel constriction.","definition_xrefs":["GO_REF:0000058","PMID:23897233","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of collecting lymphatic vessel constriction","termid":"GO:1903814"},{"relation_name":"positively_regulates","term_name":"collecting lymphatic vessel constriction","termid":"GO:1990192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collecting lymphatic vessel constriction","synonyms":[{"name":"activation of collecting lymphatic vessel constriction","type":"narrow"},{"name":"activation of lymphatic vessel myogenic constriction","type":"narrow"},{"name":"positive regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"up regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"up regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"up-regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"up-regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"upregulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"upregulation of lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1903816"}


id: GO:0048801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the antennal joint are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"antennal joint development","termid":"GO:0048098"},{"relation_name":"part_of","term_name":"antennal morphogenesis","termid":"GO:0048800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal joint morphogenesis","termid":"GO:0048801"}


id: PR:O74508
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component spp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.05c","synonyms":[{"name":"COMPASS component spp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component spp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spf1","type":"exact"},{"name":"complex proteins associated with set1 protein spp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74508"}


id: MONDO:1012151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, rabbit","secondary_identifiers":["OMIA:000621-9986"],"termid":"MONDO:1012151","xrefs":{"Monarch":{"xref_id":"1012151"}}}


id: PBO:0072655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 8B","termid":"PBO:0072655"}


id: GO:0048744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:lm","GOC:dph","GOC:mtg_muscle","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle fiber development","termid":"GO:0048742"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle fiber development","synonyms":[{"name":"down regulation of skeletal muscle fiber development","type":"exact"},{"name":"down-regulation of skeletal muscle fiber development","type":"exact"},{"name":"downregulation of skeletal muscle fiber development","type":"exact"},{"name":"inhibition of skeletal muscle fiber development","type":"narrow"},{"name":"negative regulation of skeletal muscle fibre development","type":"exact"},{"name":"negative regulation of skeletal myofiber development","type":"exact"},{"name":"negative regulation of skeletal myofibre development","type":"exact"}],"termid":"GO:0048744"}


id: PATO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's involvement of only one part or side.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral","termid":"PATO:0000634"}


id: GO:0010731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The protein modification process in which a glutathione molecule is added to a protein amino acid through a disulfide linkage.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein glutathionylation","synonyms":[{"name":"protein amino acid glutathionylation","type":"exact"}],"termid":"GO:0010731"}


id: GO:0015226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of carnitine across a membrane. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"carnitine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-165026","Reactome:R-HSA-164967","Reactome:R-HSA-549297","Reactome:R-HSA-5625674"],"synonyms":[{"name":"vitamin Bt transporter activity","type":"exact"}],"termid":"GO:0015226"}


id: GO:0015801
data:
  {"annotated_genes":["SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[105736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[105739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[64300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015828"}]},"cv_name":"biological_process","definition":"The directed movement of aromatic amino acids, amino acids with aromatic ring, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"aromatic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015801","terms_by_termid":{"GO:0015828":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null}}


id: PBO:0042718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle exit and neuronal differentiation 1","termid":"PBO:0042718"}


id: PBO:0073444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI5 dependent homologous recombination repair protein 1","termid":"PBO:0073444"}


id: GO:0021646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the vagus nerve. This process pertains to the initial formation of a structure from unspecified parts. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["GOC:dph","GOC:cls","ISBN:0838580343","GO_REF:0000021","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"vagus nerve morphogenesis","termid":"GO:0021644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve formation","synonyms":[{"name":"CN X biosynthesis","type":"related"},{"name":"CN X formation","type":"related"}],"termid":"GO:0021646"}


id: PBO:0077014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS2 antisense RNA 1","termid":"PBO:0077014"}


id: GO:0098579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sex chromosome that has not been inactivated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"active sex chromosome","termid":"GO:0098579"}


id: GO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the optic lobe placode. In Drosophila, for example, the placode appears in the dorsolateral region of the head in late stage 11 embryos and is the precursor to the larval visual system.","definition_xrefs":["GOC:mtg_sensu","PMID:8402833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"insect visual primordium development","termid":"GO:0001748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insect visual primordium formation","secondary_identifiers":["GO:0007457"],"synonyms":[{"name":"optic lobe and Bolwig's organ precursor formation","type":"exact"},{"name":"optic lobe placode formation","type":"exact"}],"termid":"GO:0001744"}


id: GO:0044532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which an organism modulates the frequency, rate or extent of apoptosis in a second organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of apoptotic process in another organism (obsolete GO:0044532)","synonyms":[{"name":"modulation of apoptotic process in other organism","type":"exact"},{"name":"regulation of apoptotic process in other organism","type":"exact"}],"termid":"GO:0044532"}


id: _global:regulates_transport_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a  process that regulates a transport process and the entity transported by that process.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_transport_of","secondary_identifiers":["RO:0002011"],"termid":"_global:regulates_transport_of"}


id: GO:0005021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a vascular endothelial growth factor (VEGF) receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["PMID:19909239","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0140096","GO:0004672","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor activity","secondary_identifiers":["GO:0036329","GO:0036327","GO:0036330","GO:0036326","GO:0036328"],"synonyms":[{"name":"VEGF receptor activity","type":"exact"},{"name":"VEGF-A-activated receptor activity","type":"narrow"},{"name":"VEGF-B-activated receptor activity","type":"narrow"},{"name":"VEGF-C-activated receptor activity","type":"narrow"},{"name":"VEGF-D-activated receptor activity","type":"narrow"},{"name":"VEGF-E-activated receptor activity","type":"narrow"},{"name":"VEGF-activated receptor activity","type":"exact"},{"name":"VEGFR activity","type":"exact"},{"name":"vascular endothelial growth factor E-activated receptor activity","type":"exact"},{"name":"vascular endothelial growth factor-activated receptor activity","type":"exact"}],"termid":"GO:0005021"}


id: PBO:0079870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-ureidopropionase 1","termid":"PBO:0079870"}


id: GO:0052612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: adonirubin + a reduced electron acceptor + oxygen = 3S,3'S-astaxanthin + an oxidized electron acceptor + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adonirubin 3-hydroxylase activity (obsolete GO:0052612)","synonyms":[{"name":"beta-carotene hydroxylase activity","type":"broad"},{"name":"carotene beta-ring hydroxylase activity","type":"broad"}],"termid":"GO:0052612"}


id: PBO:0068545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 151, pseudogene","termid":"PBO:0068545"}


id: GO:0034131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 1 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 1 signaling pathway","termid":"GO:0034130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 1 signaling pathway","synonyms":[{"name":"regulation of TLR1 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034131"}


id: FYPO:0003104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from mRNA transcripts measured in a cell is greater than normal.","definition_xrefs":["PomBase:mah","PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased mRNA-derived small RNA level","synonyms":[{"name":"increased accumulation of mRNA-derived small RNAs","type":"related"},{"name":"increased mRNA-derived small RNA accumulation","type":"related"},{"name":"increased mRNA-derived small RNA level during mitotic cell cycle","type":"related"},{"name":"increased mRNA-derived small RNA level during vegetative growth","type":"exact"},{"name":"increased mRNA-derived small transcript level","type":"exact"},{"name":"increased protein-coding gene-derived small RNA level","type":"related"}],"termid":"FYPO:0003104"}


id: GO:0007196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by glutamate binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:tb","GOC:signaling","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor signaling pathway","termid":"GO:0007216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway","synonyms":[{"name":"adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by G-protein-coupled glutamate receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by metabotropic glutamate receptor signaling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by metabotropic glutamate receptor signalling pathway","type":"exact"},{"name":"metabotropic glutamate receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"metabotropic glutamate receptor, adenylyl cyclase inhibiting pathway","type":"exact"}],"termid":"GO:0007196"}


id: PBO:0050703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 1 pseudogene 1","termid":"PBO:0050703"}


id: PBO:0086245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may be involved in pH regulation; probable ortholog of A. nidulans PalC, which is involved in pH regulation and binds to the ESCRT-III complex; null mutant does not properly process Rim101p and has decreased resistance to rapamycin; GFP-fusion protein is cytoplasmic; relative distribution to cytoplasm increases upon DNA replication stress","termid":"PBO:0086245"}


id: MONDO:0016601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult-onset citrullinemia type I is a form of citrullinemia type I characterized clinically by adult onset of symptoms including variable hyperammonemia and less striking neurological findings which may include intense headache, scotomas, migraine-like episodes, ataxia, slurred speech, lethargy and drowsiness. Serious increased intracranial pressure may occur.","definition_xrefs":["Orphanet:247573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrullinemia type I","termid":"MONDO:0008988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"adult-onset citrullinemia type I","secondary_identifiers":["GARD:20660","NANDO:2201095"],"synonyms":[{"name":"adult-onset citrullinemia type 1","type":"exact"},{"name":"late-onset citrullinemia type 1","type":"exact"},{"name":"late-onset citrullinemia type I","type":"exact"}],"termid":"MONDO:0016601","xrefs":{"Monarch":{"xref_id":"0016601"}}}


id: PR:000050220
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been ubiquitinated on Lys-15. Example: UniProtKB:P10651, 2-136, Lys-15, MOD:01148.","definition_xrefs":["PomBase:MAH","PRO:CNA","PMID:31468675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Ubiq:(K14)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"H3K14ub","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K14-ubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"hht3/InitMet-/Ubiq:(K15)","type":"exact"},{"name":"hht3/Ubiq:(K14)","type":"exact"}],"termid":"PR:000050220"}


id: GO:0010935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of macrophage cytokine production. Macrophage cytokine production is the appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"macrophage cytokine production","termid":"GO:0010934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage cytokine production","termid":"GO:0010935"}


id: PBO:0028698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process","termid":"PBO:0028698"}


id: GO:0008320
data:
  {"annotated_genes":["SJAG_02208","SJAG_00959","SJAG_02330","SJAG_05259","SJAG_03560","SJAG_04218","SJAG_01640","SJAG_03502","SJAG_04996","SJAG_03415","SJAG_03358","SJAG_02077","SJAG_00373","SJAG_03515","SJAG_01879"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69320,74969,75187,75378,75733,76760,80537,80756,80937,108102],"is_not":false,"summary":null,"term":"GO:0008320"},{"annotations":[107110,109502,105186,109525,113762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a protein from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"},{"relation_name":"is_a","term_name":"protein transporter activity","termid":"GO:0140318"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_00959":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140318","GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"protein transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5244404","Reactome:R-HSA-5228406","Reactome:R-HSA-1268022","Reactome:R-HSA-184269","GO:0015463","Reactome:R-HSA-1299475","GO:0015266","Reactome:R-HSA-3149434","Reactome:R-HSA-5210943","Reactome:R-HSA-5244506","Reactome:R-HSA-5250972","Reactome:R-HSA-5229111","Reactome:R-HSA-5336420","Reactome:R-HSA-5244428","Reactome:R-HSA-5250616","Reactome:R-HSA-5205661","Reactome:R-HSA-5210947","Reactome:R-HSA-9698930","Reactome:R-HSA-5250884","Reactome:R-HSA-5246514","Reactome:R-HSA-9636375","Reactome:R-HSA-9698933"],"synonyms":[{"name":"protein channel activity","type":"related"}],"termid":"GO:0008320","terms_by_termid":{"GO:0008320":null,"GO:0015450":null}}


id: GO:0080035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of progoitrin, a 2-hydroxy-but-3-enyl glucosinolate. Glucosinolates are substituted thioglucosides found in rapeseed products and related cruciferae, and progoitrin has been implicated in causing goiters in mammals and bitter taste in cruciferous vegetables.","definition_xrefs":["PMID:11560911","PMID:18945935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"2-hydroxy-but-3-enyl glucosinolate biosynthetic process","synonyms":[{"name":"2-hydroxy-but-3-enyl glucosinolate anabolism","type":"exact"},{"name":"2-hydroxy-but-3-enyl glucosinolate biosynthesis","type":"exact"},{"name":"2-hydroxy-but-3-enyl glucosinolate formation","type":"exact"},{"name":"2-hydroxy-but-3-enyl glucosinolate synthesis","type":"exact"},{"name":"progoitrin biosynthesis","type":"exact"},{"name":"progoitrin biosynthetic process","type":"exact"},{"name":"progoitrin synthesis","type":"exact"}],"termid":"GO:0080035"}


id: PBO:0048758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2A pseudogene 1","termid":"PBO:0048758"}


id: GO:0031863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostaglandin D2 receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"prostaglandin D2 receptor binding","synonyms":[{"name":"prostaglandin D2 receptor ligand","type":"narrow"},{"name":"prostanoid DP receptor binding","type":"exact"}],"termid":"GO:0031863"}


id: MONDO:0016399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amino acid or protein metabolism disease with epilepsy (obsolete MONDO:0016399)","secondary_identifiers":["Orphanet:225689"],"termid":"MONDO:0016399","xrefs":{"Monarch":{"xref_id":"0016399"}}}


id: PBO:0052337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2026","termid":"PBO:0052337"}


id: MONDO:0008363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raindrop hypopigmentation","secondary_identifiers":["MESH:C566724","MEDGEN:356767","UMLS:C1867393","OMIM:179500"],"synonyms":[{"name":"raindrop hypopigmentation","type":"exact"}],"termid":"MONDO:0008363","xrefs":{"Monarch":{"xref_id":"0008363"}}}


id: GO:2000135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of regulation of secondary heart field cardioblast proliferation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of regulation of secondary heart field cardioblast proliferation (obsolete GO:2000135)","synonyms":[{"name":"positive regulation of regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"positive regulation of regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:2000135"}


id: PBO:0062872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 7A","termid":"PBO:0062872"}


id: PR:O13785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle transport protein USE1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13050:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein use1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.07c","secondary_identifiers":["UniProtKB:O13785"],"synonyms":[{"name":"SPAC17G6.07c","type":"related"},{"name":"Spom972h-USE1","type":"exact"}],"termid":"PR:O13785"}


id: FYPO:0007021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a cytosine residue in a tRNA molecule to form 2'-O-methylcytidine does not occur.","definition_xrefs":["PMID:25404562","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"abolished tRNA cytosine 2'-O-methylation","synonyms":[{"name":"2'-O-methylcytidine absent from tRNA","type":"related"},{"name":"abolished tRNA 2'-O-methylcytidine formation","type":"exact"},{"name":"abolished tRNA Cm formation","type":"exact"},{"name":"abolished tRNA cytosine 2'-O-methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA cytosine 2'-O-methylation during vegetative growth","type":"exact"},{"name":"tRNA cytosine 2'-O-methylation abolished","type":"related"}],"termid":"FYPO:0007021"}


id: GO:0010509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of polyamine within a cell.","definition_xrefs":["GOC:dph","GOC:tb","PMID:11161802","PMID:9761731","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular polyamine homeostasis","synonyms":[{"name":"polyamine homeostasis","type":"related"}],"termid":"GO:0010509"}


id: PBO:0027745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_nitrogen_starvation","termid":"PBO:0027745"}


id: FYPO:0007955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the rate or speed of microtubule polymerization, i.e. the additionl of tubulin dimers to a microtubule, is abnormal.","definition_xrefs":["PomBase:val","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"abnormal rate of microtubule polymerisation during vegetative growth","type":"exact"}],"termid":"FYPO:0007955"}


id: GO:1905737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-proline import across plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:24344203","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proline import across plasma membrane","termid":"GO:1902836"},{"relation_name":"is_a","term_name":"regulation of L-proline import across plasma membrane","termid":"GO:1905735"},{"relation_name":"positively_regulates","term_name":"L-proline import across plasma membrane","termid":"GO:1904271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of L-proline import across plasma membrane","termid":"GO:1905737"}


id: GO:0098036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites to produce 3' protruding ends.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral DNA genome packaging, 3' extended cos packaging","termid":"GO:0098036"}


id: FYPO:0003370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium fluoride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000003","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on sodium fluoride","synonyms":[{"name":"normal cell population growth in presence of sodium fluoride","type":"exact"},{"name":"normal cell population growth on sodium fluoride","type":"exact"},{"name":"normal cellular response to sodium fluoride","type":"related"},{"name":"normal growth on NaF","type":"exact"},{"name":"normal vegetative cell population growth on sodium fluoride","type":"exact"}],"termid":"FYPO:0003370"}


id: GO:0106145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes of the reaction: scopoletin + 2-oxoglutarate+O2=fraxetin +succinate+ CO2).","definition_xrefs":["PMID:29581584","GOC:lr","RHEA:57848","PMID:29361149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"scopoletin 8-hydroxylase activity","secondary_identifiers":["EC:1.14.11.60"],"termid":"GO:0106145"}


id: PBO:0110238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex armadillo-type fold Ipi1","termid":"PBO:0110238"}


id: PBO:0074169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member G6","termid":"PBO:0074169"}


id: PBO:0046773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin glycosyltransferase 1","termid":"PBO:0046773"}


id: PBO:0059235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L9","termid":"PBO:0059235"}


id: FYPO:0006548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which gene expression occurs to a greater extent than normal. One or more parts of gene expression, such as transcription or translation, may be affected, and all genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased gene expression","termid":"FYPO:0006548"}


id: GO:0047022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 7-beta-hydroxysteroid + NADP+ = a 7-oxosteroid + NADPH + H+.","definition_xrefs":["RHEA:20233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"7-beta-hydroxysteroid dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.201","MetaCyc:1.1.1.201-RXN","Wikipedia:7beta-hydroxysteroid_dehydrogenase_(NADP+)"],"synonyms":[{"name":"7beta-hydroxysteroid dehydrogenase (NADP+)","type":"related"},{"name":"7beta-hydroxysteroid:NADP+ 7-oxidoreductase activity","type":"related"},{"name":"NADP-dependent 7-beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"NADP-dependent 7beta-hydroxysteroid dehydrogenase activity","type":"related"}],"termid":"GO:0047022"}


id: GO:0060950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac glial cell differentiation","termid":"GO:0060950"}


id: MOD:00785
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N2-acetyl-L-tryptophan.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N2-acetyl-L-tryptophan","synonyms":[{"name":"AcTrp","type":"exact"}],"termid":"MOD:00785"}


id: GO:1990476
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool that remain unreleased even after prolonged stimulation causes a saturating degree of vesicular turnover. 50-80% of the total number of synaptic vesicles at a resting terminal bouton are in this pool.","definition_xrefs":["PMID:22745285","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"synaptic vesicle, resting pool","synonyms":[{"name":"reserve pool of synaptic vesicles","type":"exact"},{"name":"resting pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990476"}


id: PBO:0024820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf5 (predicted)","termid":"PBO:0024820"}


id: PBO:0078582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 55","termid":"PBO:0078582"}


id: PBO:0046628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 9","termid":"PBO:0046628"}


id: PBO:0049771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 9","termid":"PBO:0049771"}


id: FYPO:0002673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing torin1.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on torin1","synonyms":[{"name":"normal cell population growth in presence of torin1","type":"exact"},{"name":"normal cell population growth on torin1","type":"exact"},{"name":"normal cellular response to torin1","type":"related"},{"name":"normal growth on torin 1","type":"exact"},{"name":"normal vegetative cell population growth on torin1","type":"exact"}],"termid":"FYPO:0002673"}


id: GO:0039510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host ATP-dependent RNA helicase activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host ATP-dependent RNA helicase activity (obsolete GO:0039510)","synonyms":[{"name":"down-regulation by virus of host ATP-dependent RNA helicase activity","type":"exact"},{"name":"downregulation by virus of host ATP-dependent RNA helicase activity","type":"exact"},{"name":"inhibition by virus of host ATP-dependent RNA helicase activity","type":"narrow"},{"name":"negative regulation by virus of host ATP-dependent RNA helicase activity","type":"exact"}],"termid":"GO:0039510"}


id: MONDO:0012469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 14","secondary_identifiers":["MEDGEN:343990","MESH:C565202","OMIM:610320","UMLS:C1853196"],"synonyms":[{"name":"MYP14","type":"exact"},{"name":"myopia 14","type":"exact"}],"termid":"MONDO:0012469","xrefs":{"Monarch":{"xref_id":"0012469"}}}


id: MONDO:0001249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic infection of the conjunctiva and cornea caused by chlamydia trachomatis.","definition_xrefs":["MESH:D014141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlamydia trachomatis infectious disease","termid":"MONDO:0005701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trachoma","secondary_identifiers":["ICD9:076.9","MEDGEN:52801","DOID:11265","ICD9:076.0","UMLS:C0040592","ICD9:076","ICD9:076.1","SCTID:2576002","icd11.foundation:372424530"],"synonyms":[{"name":"active stage trachoma","type":"exact"},{"name":"trachoma dubium","type":"exact"}],"termid":"MONDO:0001249","xrefs":{"Monarch":{"xref_id":"0001249"}}}


id: PBO:0057208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376b","termid":"PBO:0057208"}


id: MONDO:0022587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone dysplasia corpus callosum agenesis","secondary_identifiers":["GARD:921"],"termid":"MONDO:0022587","xrefs":{"Monarch":{"xref_id":"0022587"}}}


id: PATO:0002309
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a by virtue of the bearer's exhibiting a consistently sized and approximately round cross-section along its length, which is many times larger than its diameter.","definition_xrefs":["PATOC:DC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subcylindrical","termid":"PATO:0002226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fiber shaped","termid":"PATO:0002309"}


id: GO:0031161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol catabolic process","synonyms":[{"name":"PtdIns catabolic process","type":"exact"},{"name":"PtdIns catabolism","type":"exact"},{"name":"phosphatidylinositol breakdown","type":"exact"},{"name":"phosphatidylinositol catabolism","type":"exact"},{"name":"phosphatidylinositol degradation","type":"exact"}],"termid":"GO:0031161"}


id: GO:0014879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an electrical stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to electrical stimulus involved in regulation of muscle adaptation","termid":"GO:0014878"},{"relation_name":"is_a","term_name":"detection of electrical stimulus","termid":"GO:0050981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in regulation of muscle adaptation","termid":"GO:0014879"}


id: GO:0070133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translational initiation","termid":"GO:0070132"},{"relation_name":"negatively_regulates","term_name":"mitochondrial translational initiation","termid":"GO:0070124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0140053"],"is_obsolete":false,"name":"negative regulation of mitochondrial translational initiation","synonyms":[{"name":"negative regulation of mitochondrial translation initiation","type":"exact"}],"termid":"GO:0070133"}


id: PATO:0001170
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001170 numerical value (obsolete PATO:0001170)","termid":"PATO:0001170"}


id: MONDO:0014179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inclusion body myopathy with Paget disease of bone and frontotemporal dementia in which the cause of the disease is a mutation in the HNRNPA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia","termid":"MONDO:0000507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0005336"],"is_obsolete":false,"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 3","secondary_identifiers":["GARD:15963","MEDGEN:815799","UMLS:C3809469","OMIM:615424","DOID:0111386"],"synonyms":[{"name":"HNRNPA1 inclusion body myopathy with Paget disease of bone and frontotemporal dementia","type":"exact"},{"name":"IBMPFD3","type":"related"},{"name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia caused by mutation in HNRNPA1","type":"exact"},{"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 3","type":"exact"},{"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia type 3","type":"exact"},{"name":"inclusion body myopathy with early-onset paget disease without frontotemporal dementia 3","type":"exact"},{"name":"multisystem Proteinopathy 3","type":"related"}],"termid":"MONDO:0014179","xrefs":{"Monarch":{"xref_id":"0014179"}}}


id: FYPO:0003462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is subject to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular trehalose level","termid":"FYPO:0001449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular trehalose level during cellular response to oxidative stress","synonyms":[{"name":"normal cellular trehalose accumulation during cellular response to oxidative stress","type":"related"},{"name":"normal cellular trehalose level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal cellular trehalose level during oxidative stress response","type":"exact"}],"termid":"FYPO:0003462"}


id: GO:0019296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving coenzyme M (2-thioethansulfonate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"coenzyme M metabolic process","synonyms":[{"name":"coenzyme M metabolism","type":"exact"}],"termid":"GO:0019296"}


id: GO:0016477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues.","definition_xrefs":["GOC:dph","GOC:pf","GOC:ems","Wikipedia:Cell_migration","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration","termid":"GO:0016477"}


id: PBO:0091408
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Rad57 independently of Swi5","termid":"PBO:0091408"}


id: PBO:0081672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 594","termid":"PBO:0081672"}


id: PBO:0035751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_tryptophan","termid":"PBO:0035751"}


id: GO:0008412
data:
  {"annotated_genes":["SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79151],"is_not":false,"summary":null,"term":"GO:0008412"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + an all-trans-polyprenyl diphosphate = a 4-hydroxy-3-all-trans-polyprenylbenzoate + diphosphate.","definition_xrefs":["RHEA:44504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate polyprenyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0048044","GO:0000043","EC:2.5.1.39","GO:0048043","MetaCyc:RXN-11368"],"synonyms":[{"name":"4-HB polyprenyltransferase activity","type":"exact"},{"name":"4-hydroxybenzoate nonaprenyltransferase activity","type":"narrow"},{"name":"PHB polyprenyl diphosphate transferase activity","type":"exact"},{"name":"para-hydroxybenzoate transferase activity","type":"exact"},{"name":"para-hydroxybenzoate-polyprenyl diphosphate transferase activity","type":"exact"},{"name":"para-hydroxybenzoate:polyprenyltransferase activity","type":"exact"}],"termid":"GO:0008412","terms_by_termid":{"GO:0008412":null}}


id: MONDO:1011667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lundehund syndrome, non-human animal","secondary_identifiers":["OMIA:002031"],"termid":"MONDO:1011667","xrefs":{"Monarch":{"xref_id":"1011667"}}}


id: PBO:0111335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1754 family, human FAM32A homolog, implicated in mRNA splicing or surveillance","termid":"PBO:0111335"}


id: GO:0075155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont transmembrane receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transmembrane receptor-mediated signal transduction in response to host (obsolete GO:0075155)","synonyms":[{"name":"negative regulation of symbiont transmembrane receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075155"}


id: GO:1901461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to formic acid","termid":"GO:1901460"},{"relation_name":"negatively_regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to formic acid","synonyms":[{"name":"down regulation of response to formic acid","type":"exact"},{"name":"down-regulation of response to formic acid","type":"exact"},{"name":"downregulation of response to formic acid","type":"exact"},{"name":"inhibition of response to formic acid","type":"narrow"}],"termid":"GO:1901461"}


id: GO:0075039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hydrostatic pressure is increased within the symbiont appressorium to breach the cuticle of the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"},{"relation_name":"part_of","term_name":"appressorium maturation","termid":"GO:0075035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of turgor in appressorium","synonyms":[{"name":"establishment of turgor in symbiont appressorium on or near host","type":"exact"},{"name":"formation of turgor in appressorium","type":"exact"},{"name":"generation of turgor in appressorium","type":"exact"}],"termid":"GO:0075039"}


id: MONDO:1012973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skeletal dysplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973","xrefs":{"Monarch":{"xref_id":"1012973"}}}


id: PBO:0061649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 21","termid":"PBO:0061649"}


id: MONDO:0700006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characteristic in which the disease has a known cause.","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic vs non-idiopathic","termid":"MONDO:0700004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-idiopathic","termid":"MONDO:0700006","xrefs":{"Monarch":{"xref_id":"0700006"}}}


id: PBO:0089551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S27","termid":"PBO:0089551"}


id: PBO:0083874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein subunit of SCF ubiquitin ligase complex; substrate-specific adaptor subunit that recruits substrates to a core ubiquitination complex","termid":"PBO:0083874"}


id: GO:0102952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + coniferyl aldehyde = H+ + coniferaldehyde glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:coniferaldehyde 4-beta-D-glucosyltransferase activity (obsolete GO:0102952)","termid":"GO:0102952"}


id: MONDO:0005695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of arteries in the central nervous system that occurs in patients with acquired immunodeficiency syndrome or aids-related opportunistic infections.","definition_xrefs":["MESH:D020943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"},{"relation_name":"is_a","term_name":"HIV infectious disease","termid":"MONDO:0005109"},{"relation_name":"is_a","term_name":"viral infection of central nervous system","termid":"MONDO:0024318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system AIDS arteritis","secondary_identifiers":["UMLS:C0752330","MEDGEN:156263"],"synonyms":[{"name":"AIDS associated cerebral aneurysmal arteriopathy","type":"exact"},{"name":"AIDS-associated cerebral aneurysmal arteriopathy","type":"exact"},{"name":"CNS Vasculitides, HIV-1-associated","type":"exact"},{"name":"CNS Vasculitides, HIV-associated","type":"exact"},{"name":"CNS vasculitis, HIV associated","type":"exact"},{"name":"CNS vasculitis, HIV-1-associated","type":"exact"},{"name":"CNS vasculitis, HIV-associated","type":"exact"},{"name":"HIV 1 associated CNS vasculitis","type":"exact"},{"name":"HIV associated vasculitis of the central nervous system","type":"exact"},{"name":"HIV-1-associated CNS Vasculitides","type":"exact"},{"name":"HIV-1-associated CNS vasculitis","type":"exact"},{"name":"HIV-associated CNS Vasculitides","type":"exact"},{"name":"HIV-associated CNS vasculitis","type":"exact"},{"name":"HIV-associated vasculitis of the central nervous system","type":"exact"},{"name":"Vasculitides, HIV-1-associated CNS","type":"exact"},{"name":"Vasculitides, HIV-associated CNS","type":"exact"},{"name":"central nervous system AIDS arteritis","type":"exact"},{"name":"cerebral aneurysmal arteriopathy, AIDS associated","type":"exact"},{"name":"cerebral aneurysmal arteriopathy, AIDS-associated","type":"exact"},{"name":"vasculitis of the central nervous system, HIV associated","type":"exact"},{"name":"vasculitis of the central nervous system, HIV-associated","type":"exact"},{"name":"vasculitis, HIV-1-associated CNS","type":"exact"},{"name":"vasculitis, HIV-associated CNS","type":"exact"}],"termid":"MONDO:0005695","xrefs":{"Monarch":{"xref_id":"0005695"}}}


id: MONDO:0001734
data:
  {"annotated_genes":["SJAG_00991","SJAG_00289","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008612"},{"annotations":[88278,88277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013199"}]},"cv_name":"mondo","definition":"Hereditary disease characterized by seizures, intellectual disability, developmental delay, and skin and ocular lesions. First signs usually occur during infancy or childhood but in rare cases may not occur until 2nd or 3rd decade.","definition_xrefs":["NCIT:C3424"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited nervous system cancer-predisposing syndrome (obsolete MONDO:0016756)","termid":"MONDO:0016756"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited renal cancer-predisposing syndrome (obsolete MONDO:0017891)","termid":"MONDO:0017891"},{"relation_name":"excluded_subClassOf","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"tuberous sclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:7199000","MedDRA:10045138","NANDO:2200826","ICD9:759.5","DOID:13515","MESH:D014402","OMIMPS:191100","icd11.foundation:1903085809","UMLS:C0041341","GARD:7830","MEDGEN:22518","NANDO:1200607","Orphanet:805"],"synonyms":[{"name":"Bourneville disease","type":"exact"},{"name":"Bourneville syndrome","type":"exact"},{"name":"Bourneville's disease","type":"exact"},{"name":"Bourneville's syndrome","type":"exact"},{"name":"TSC","type":"exact"},{"name":"adenoma sebaceum","type":"related"},{"name":"adenoma sebaceum syndrome","type":"related"},{"name":"cerebral sclerosis","type":"exact"},{"name":"epiloia","type":"exact"},{"name":"tuberose sclerosis","type":"exact"},{"name":"tuberous sclerosis","type":"exact"},{"name":"tuberous sclerosis complex","type":"exact"},{"name":"tuberous sclerosis syndrome","type":"exact"}],"termid":"MONDO:0001734","terms_by_termid":{"MONDO:0008612":null,"MONDO:0013199":null},"xrefs":{"Monarch":{"xref_id":"0001734"}}}


id: PR:000037296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase cds1 in Schizosaccharomyces pombe that has been phosphorylated on the Thr residue in the second TQ motif by rad3. Example: UniProtKB:Q09170, Thr-11, MOD:00047.","definition_xrefs":["PomBase:AL","PMID:15173168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cds1/Phos:(T11)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein kinase cds1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-CHEK2/Phos:1","type":"exact"},{"name":"cds1/Phos:(T11)","type":"exact"}],"termid":"PR:000037296"}


id: GO:0047431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxy-6-methylpyridine-3,4-dicarboxylate + H+ = 5-hydroxy-6-methylpyridine-3-carboxylate + CO2.","definition_xrefs":["EC:4.1.1.51","RHEA:13669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-decarboxylase activity","secondary_identifiers":["MetaCyc:4.1.1.51-RXN","KEGG_REACTION:R03461"],"synonyms":[{"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-carboxy-lyase (3-hydroxy-2-methylpyridine-5-carboxylate-forming)","type":"related"},{"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-carboxy-lyase activity","type":"related"}],"termid":"GO:0047431"}


id: MONDO:0004918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"central corneal ulcer","secondary_identifiers":["UMLS:C0155069","DOID:9910","icd11.foundation:457542318","MEDGEN:509767","SCTID:7426009","ICD9:370.03"],"termid":"MONDO:0004918","xrefs":{"Monarch":{"xref_id":"0004918"}}}


id: PBO:0028338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_DNA_level_during_vegetative_growth","termid":"PBO:0028338"}


id: GO:0031488
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XVIII myosin heavy chain and associated light chains; myosin XVIII heavy chains contain an N-terminal PDZ domain.","definition_xrefs":["PMID:11294886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015629"],"is_obsolete":false,"name":"myosin XVIII complex","termid":"GO:0031488"}


id: PBO:0043847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase X, M14 family member 2","termid":"PBO:0043847"}


id: PBO:0017506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transmembrane transporter Gms2 (predicted)","termid":"PBO:0017506"}


id: MONDO:0015785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi syndrome","termid":"MONDO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"Prader-Willi syndrome due to translocation","secondary_identifiers":["Orphanet:177907","UMLS:C5680509","GARD:17074","MEDGEN:1826085"],"termid":"MONDO:0015785","xrefs":{"Monarch":{"xref_id":"0015785"}}}


id: PBO:0078717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 2-1","termid":"PBO:0078717"}


id: PBO:0003934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol dehydrogenase His2 (predicted)","termid":"PBO:0003934"}


id: PBO:0070028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1325, pseudogene","termid":"PBO:0070028"}


id: MONDO:0003831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromophil adenoma of the kidney","termid":"MONDO:0003829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"type 2 papillary adenoma of the kidney","secondary_identifiers":["MEDGEN:311387","UMLS:C1519710","DOID:6259","NCIT:C39810"],"synonyms":[{"name":"type 2 papillary adenoma of the kidney","type":"exact"},{"name":"type 2 renal papillary adenoma","type":"exact"}],"termid":"MONDO:0003831","xrefs":{"Monarch":{"xref_id":"0003831"}}}


id: PR:P87229
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4G3.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4G3.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.03","synonyms":[{"name":"Spom972h-SPCC4G3.03","type":"exact"}],"termid":"PR:P87229"}


id: PBO:0068794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 31, pseudogene","termid":"PBO:0068794"}


id: PBO:0064683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 19","termid":"PBO:0064683"}


id: GO:1904535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomeric loop disassembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:nc","PMID:22579284","GOC:BHF_telomere","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"positively_regulates","term_name":"telomeric loop disassembly","termid":"GO:0090657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomeric loop disassembly","synonyms":[{"name":"activation of T loop disassembly","type":"narrow"},{"name":"activation of telomeric loop disassembly","type":"narrow"},{"name":"positive regulation of T loop disassembly","type":"exact"},{"name":"up regulation of T loop disassembly","type":"exact"},{"name":"up regulation of telomeric loop disassembly","type":"exact"},{"name":"up-regulation of T loop disassembly","type":"exact"},{"name":"up-regulation of telomeric loop disassembly","type":"exact"},{"name":"upregulation of T loop disassembly","type":"exact"},{"name":"upregulation of telomeric loop disassembly","type":"exact"}],"termid":"GO:1904535"}


id: MONDO:0016059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft lip/palate-deafness-sacral lipoma syndrome is characterized by cleft lip/palate, profound sensorineural deafness, and a sacral lipoma. It has been described in two brothers of Chinese origin born to non consanguineous parents. Additional findings included appendages on the heel and thigh, or anterior sacral meningocele and dislocated hip. The mode of inheritance is probably autosomal or X-linked recessive.","definition_xrefs":["Orphanet:2003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip/palate-deafness-sacral lipoma syndrome","secondary_identifiers":["SCTID:716007007","MEDGEN:905203","UMLS:C4274888","GARD:18755"],"synonyms":[{"name":"Lowry-Yong syndrome","type":"exact"}],"termid":"MONDO:0016059","xrefs":{"Monarch":{"xref_id":"0016059"}}}


id: GO:0047292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6AS,11AS)-3,6A,9-trihydroxypterocarpan + dimethylallyl-pyrophosphate = glyceollin + diphosphate.","definition_xrefs":["EC:2.5.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"trihydroxypterocarpan dimethylallyltransferase activity","synonyms":[{"name":"dimethylallyl-diphosphate:(6aS,11aS)-3,6a,9-trihydroxypterocarpan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallyl-diphosphate:(6aS,11aS)-3,6a,9-trihydroxypterocarpan dimethyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:3,6a,9-trihydroxypterocarpan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:trihydroxypterocarpan dimethylallyl transferase activity","type":"related"}],"termid":"GO:0047292"}


id: MONDO:0021034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of alopecia that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete hereditary alopecia (obsolete MONDO:0021034)","secondary_identifiers":["Orphanet:481771"],"synonyms":[{"name":"genetic alopecia","type":"exact"}],"termid":"MONDO:0021034","xrefs":{"Monarch":{"xref_id":"0021034"}}}


id: MONDO:1012929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in pigs due to a mutation in the APP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, APP-related, pig","secondary_identifiers":["OMIA:002538-9823"],"termid":"MONDO:1012929","xrefs":{"Monarch":{"xref_id":"1012929"}}}


id: FYPO:0000785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to formamide. Cells stop growing (and may die) at a concentration of formamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to formamide","synonyms":[{"name":"hypersensitive to formamide","type":"exact"},{"name":"sensitive to formamide during mitotic cell cycle","type":"related"},{"name":"sensitive to formamide during vegetative growth","type":"exact"}],"termid":"FYPO:0000785"}


id: PBO:0077058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THSD4 antisense RNA 1","termid":"PBO:0077058"}


id: GO:0004625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-dependent secreted phospholipase A2 activity (obsolete GO:0004625)","synonyms":[{"name":"calcium-dependent secreted phospholipase A2 activity","type":"exact"}],"termid":"GO:0004625"}


id: PBO:0080862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 3","termid":"PBO:0080862"}


id: PBO:0050177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 4","termid":"PBO:0050177"}


id: MONDO:0006906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmented villonodular synovitis (obsolete MONDO:0006906)","termid":"MONDO:0006906","xrefs":{"Monarch":{"xref_id":"0006906"}}}


id: PBO:0044146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitobiase","termid":"PBO:0044146"}


id: PBO:0075406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 4","termid":"PBO:0075406"}


id: FYECO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glutamate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glutamate","termid":"FYECO:0000084"}


id: MONDO:0020678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hearing loss in which the root cause lies in the inner ear or sensory organ (cochlea and associated structures) or the vestibulocochlear nerve (cranial nerve VIII).","definition_xrefs":["Wikipedia:Sensorineural_hearing_loss"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensorineural hearing loss disorder","secondary_identifiers":["EFO:1001176","DOID:10003","MEDGEN:9164","SCTID:60700002","UMLS:C0018784","NCIT:C26739","HP:0000407"],"synonyms":[{"name":"SNHL","type":"exact"},{"name":"neurosensory deafness","type":"related"},{"name":"sensorineural deafness","type":"exact"},{"name":"sensorineural hearing loss","type":"exact"},{"name":"sensorineural hearing loss disorder","type":"exact"}],"termid":"MONDO:0020678","xrefs":{"Monarch":{"xref_id":"0020678"}}}


id: GO:0140274
data:
  {"annotated_genes":["SJAG_04140","SJAG_03048","SJAG_00082","SJAG_01805","SJAG_01224","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100501],"is_not":false,"summary":null,"term":"GO:0140274"},{"annotations":[113163,104279,91824,118664,95650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[118667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904967"}]},"cv_name":"biological_process","definition":"The cell cycle process where kinetochore microtubule attachment defects are corrected.","definition_xrefs":["PMID:15525536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01224":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"repair of kinetochore microtubule attachment defect","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"correction of kinetochore microtubule attachment defects","type":"exact"},{"name":"repair of kinetochore microtubule attachment defects","type":"exact"}],"termid":"GO:0140274","terms_by_termid":{"GO:0140274":null,"GO:0140429":null,"GO:1904967":null}}


id: FYPO:0003816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell requires histidine or lysine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for histidine or lysine","synonyms":[{"name":"growth auxotrophic for histidine or lysine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for histidine or lysine during vegetative growth","type":"exact"},{"name":"growth auxotrophic for lysine or histidine","type":"exact"},{"name":"histidine or lysine auxotrophy","type":"exact"}],"termid":"FYPO:0003816"}


id: GO:0018777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alkyl halide + H2O = alcohol + HCl. Substrates are 1,3(R),4,6(R)-tetrachloro-1,4-cyclohexadiene (forms 2,4,5-trichloro-2,5-cyclohexadiene-1-ol) and 2,4,5-trichloro-2,5-cyclohexadiene-1-ol (forms 2,5-dichloro-2,5-cyclohexadiene-1,4-diol).","definition_xrefs":["PMID:10464214"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,3,4,6-tetrachloro-1,4-cyclohexadiene halidohydrolase activity (obsolete GO:0018777)","termid":"GO:0018777"}


id: PBO:0069504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 771, pseudogene","termid":"PBO:0069504"}


id: PBO:0017725
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Partner Of Spa2","termid":"PBO:0017725"}


id: PBO:0076669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 2","termid":"PBO:0076669"}


id: PR:O14227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rdp1 gene.","definition_xrefs":["UniProtKB:O14227","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent RNA polymerase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.09","synonyms":[{"name":"Spom972h-rdp1","type":"exact"},{"name":"protein rdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14227"}


id: MONDO:0011973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc deficiency, transient neonatal","secondary_identifiers":["MEDGEN:330858","MESH:C564286","OMIM:608118","UMLS:C1842486"],"synonyms":[{"name":"TNZD","type":"related"},{"name":"zinc deficiency, neonatal, due to Low breast milk zinc","type":"related"},{"name":"zinc deficiency, transient neonatal","type":"exact"},{"name":"zinc in breast milk, reduced","type":"related"}],"termid":"MONDO:0011973","xrefs":{"Monarch":{"xref_id":"0011973"}}}


id: GO:0038056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway by stopping, preventing or reducing the frequency, rate or extent of secretion of a member of the BMP family of proteins from the signaling cell.","definition_xrefs":["GOC:bf","GOC:sart","PMID:21750037"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of BMP signaling pathway by negative regulation of BMP secretion (obsolete GO:0038056)","synonyms":[{"name":"negative regulation of BMP signaling pathway by negative regulation of bone morphogenetic protein secretion","type":"exact"},{"name":"negative regulation of BMP signalling pathway by negative regulation of BMP secretion","type":"exact"}],"termid":"GO:0038056"}


id: MONDO:1012035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy and woolly haircoat syndrome, non-human animal","termid":"MONDO:1011641"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and woolly haircoat syndrome, cattle","secondary_identifiers":["OMIA:000161-9913"],"termid":"MONDO:1012035","xrefs":{"Monarch":{"xref_id":"1012035"}}}


id: PBO:0070006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1303, pseudogene","termid":"PBO:0070006"}


id: GO:0048523
data:
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