# terms

id: GO:0045008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of the bond between the sugar in the backbone and the C or T base, causing the base to be removed and leaving a depyrimidinated sugar.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair, AP site formation","termid":"GO:0006285"},{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006259","GO:0055086","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"depyrimidination","secondary_identifiers":["Reactome:R-HSA-73928"],"termid":"GO:0045008"}


id: PBO:0060791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S2","termid":"PBO:0060791"}


id: MONDO:0019144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital protein S deficiency is an inherited coagulation disorder characterized by recurrent venous thrombosis symptoms due to reduced synthesis and/or activity levels of protein S.","definition_xrefs":["Orphanet:743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein S deficiency","termid":"MONDO:0002304"},{"relation_name":"is_a","term_name":"inherited thrombophilia","termid":"MONDO:0100240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary thrombophilia due to congenital protein S deficiency","secondary_identifiers":["DOID:0111905","icd11.foundation:1305244529","MEDGEN:748876","UMLS:C2584611","GARD:16543"],"synonyms":[{"name":"autosomal recessive thrombophilia due to congenital protein S deficiency","type":"exact"},{"name":"hereditary thrombophilia due to congenital protein S deficiency","type":"exact"},{"name":"severe hereditary thrombophilia due to congenital protein S deficiency","type":"related"}],"termid":"MONDO:0019144","xrefs":{"Monarch":{"xref_id":"0019144"}}}


id: MONDO:0017782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic syndrome characterized by mild to severe global developmental delay, intellectual disability and behavioral abnormalities, hypotonia, strabismus, optic nerve hypoplasia and mild facial dysmorphic features (down slanting palpebral fissures, frontal bossing, crowded teeth, auricular abnormalities and prominent philtral ridges). Other associated clinical features may include seizures and skeletal anomalies (kyphosis/scoliosis, pectus deformities).","definition_xrefs":["Orphanet:313892"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental and speech delay due to SOX5 deficiency","secondary_identifiers":["UMLS:C4749915","GARD:17415","MEDGEN:1660895"],"termid":"MONDO:0017782","xrefs":{"Monarch":{"xref_id":"0017782"}}}


id: PBO:0081230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMYND10 antisense RNA 1","termid":"PBO:0081230"}


id: MONDO:0008132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leber plus disease","termid":"MONDO:0020478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"optic atrophy with demyelinating disease of CNS","secondary_identifiers":["MESH:C563496","OMIM:165200","DOID:0111756","GARD:15098","UMLS:C1833830","MEDGEN:322290"],"synonyms":[{"name":"optic atrophy with demyelinating disease of CNS","type":"exact"}],"termid":"MONDO:0008132","xrefs":{"Monarch":{"xref_id":"0008132"}}}


id: GO:0099065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of spine apparatus membrane (obsolete GO:0099065)","termid":"GO:0099065"}


id: GO:0003986
data:
  {"annotated_genes":["SJAG_02985","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77210,78557],"is_not":false,"summary":null,"term":"GO:0003986"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O = acetate + CoA + H+.","definition_xrefs":["EC:3.1.2.1","RHEA:20289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"acetyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ACETYL-COA-HYDROLASE-RXN","KEGG_REACTION:R00227","Reactome:R-HSA-2066779","Reactome:R-HSA-390304"],"synonyms":[{"name":"acetyl coenzyme A acylase activity","type":"related"},{"name":"acetyl coenzyme A deacylase activity","type":"related"},{"name":"acetyl coenzyme A hydrolase activity","type":"related"},{"name":"acetyl-CoA acylase activity","type":"related"},{"name":"acetyl-CoA deacylase activity","type":"related"},{"name":"acetyl-CoA thiol esterase activity","type":"related"}],"termid":"GO:0003986","terms_by_termid":{"GO:0003986":null}}


id: MONDO:0020568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myiasis","termid":"MONDO:0019147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous myiasis","secondary_identifiers":["GARD:19723","Orphanet:99983","SCTID:240877000","UMLS:C0027031","icd11.foundation:1342682193","MEDGEN:507962","ICD10CM:B87.0"],"termid":"MONDO:0020568","xrefs":{"Monarch":{"xref_id":"0020568"}}}


id: GO:0106245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-1-phosphatidylethanolamine + L-serine = L-1-phosphatidylserine + ethanolamine.","definition_xrefs":["PMID:31869331","RHEA:27606","PMID:19014349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016780","GO:0016740"],"is_obsolete":false,"name":"L-serine-phosphatidylethanolamine phosphatidyltransferase activity","secondary_identifiers":["EC:2.7.8.29"],"termid":"GO:0106245"}


id: GO:0097090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.","definition_xrefs":["GOC:pr","GOC:sjp","GOC:BHF","PMID:19730411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"presynaptic membrane organization","synonyms":[{"name":"pre-synaptic membrane organization","type":"exact"},{"name":"presynaptic membrane organisation","type":"exact"}],"termid":"GO:0097090"}


id: MONDO:0043519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A traumatic injury involving interruption of tissue cohesiveness that results from exposure to caustic chemicals, extreme heat, extreme cold or excessive radiation.","definition_xrefs":["NCIT:C34441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"burn","secondary_identifiers":["SCTID:125666000","ICD10CM:T20-T25","MESH:D002056"],"synonyms":[{"name":"Burn","type":"exact"},{"name":"Burn(s)","type":"exact"},{"name":"burn","type":"exact"}],"termid":"MONDO:0043519","xrefs":{"Monarch":{"xref_id":"0043519"}}}


id: GO:1902428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of water channel activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of water channel activity (obsolete GO:1902428)","synonyms":[{"name":"down regulation of aquaporin","type":"narrow"},{"name":"down regulation of water channel activity","type":"exact"},{"name":"down-regulation of aquaporin","type":"narrow"},{"name":"down-regulation of water channel activity","type":"exact"},{"name":"downregulation of aquaporin","type":"narrow"},{"name":"downregulation of water channel activity","type":"exact"},{"name":"inhibition of aquaporin","type":"narrow"},{"name":"inhibition of water channel activity","type":"narrow"},{"name":"negative regulation of aquaporin","type":"narrow"}],"termid":"GO:1902428"}


id: MONDO:1012111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoadrenocorticism, non-human animal","termid":"MONDO:1011675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoadrenocorticism, horse","secondary_identifiers":["OMIA:000519-9796"],"termid":"MONDO:1012111","xrefs":{"Monarch":{"xref_id":"1012111"}}}


id: MONDO:0008502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sulfhemoglobinemia","termid":"MONDO:0006988"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"sulfhemoglobinemia, congenital","secondary_identifiers":["MEDGEN:350024","OMIM:185460","MESH:C566102","UMLS:C1861437"],"synonyms":[{"name":"sulfhemoglobinemia, congenital","type":"exact"}],"termid":"MONDO:0008502","xrefs":{"Monarch":{"xref_id":"0008502"}}}


id: FYPO:0003603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiosis I","synonyms":[{"name":"abnormal first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003603"}


id: PBO:0042238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 1","termid":"PBO:0042238"}


id: PBO:0039686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family B member 3","termid":"PBO:0039686"}


id: PBO:0004411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLDc domain protein 2","termid":"PBO:0004411"}


id: GO:1901027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dextrin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"dextrin catabolic process","synonyms":[{"name":"dextrin breakdown","type":"exact"},{"name":"dextrin catabolism","type":"exact"},{"name":"dextrin degradation","type":"exact"}],"termid":"GO:1901027"}


id: MONDO:0009982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa inversa with deafness","secondary_identifiers":["MESH:C564842","MEDGEN:341447","OMIM:268010","UMLS:C1849405"],"synonyms":[{"name":"retinitis pigmentosa inversa with deafness","type":"exact"}],"termid":"MONDO:0009982","xrefs":{"Monarch":{"xref_id":"0009982"}}}


id: PATO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000721 absolute yield value (obsolete PATO:0000721)","termid":"PATO:0000721"}


id: GO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an angiotensin-mediated signaling system present in the brain regulates the force with which blood passes through the circulatory system.","definition_xrefs":["PMID:2909574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"is_a","term_name":"regulation of blood volume by renin-angiotensin","termid":"GO:0002016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brain renin-angiotensin system","termid":"GO:0002035"}


id: PATO:0001165
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001165 urine enzyme composition value (obsolete PATO:0001165)","termid":"PATO:0001165"}


id: PBO:0078443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining 1","termid":"PBO:0078443"}


id: MONDO:1012481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cervical vertebral compressive myelopathy, non-human animal","termid":"MONDO:1011891"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral compressive myelopathy, horse","secondary_identifiers":["OMIA:001894-9796"],"termid":"MONDO:1012481","xrefs":{"Monarch":{"xref_id":"1012481"}}}


id: MONDO:0001038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"perforated corneal ulcer","secondary_identifiers":["MEDGEN:508831","UMLS:C0151844","icd11.foundation:232838320","ICD9:370.06","SCTID:46606001","DOID:10445"],"termid":"MONDO:0001038","xrefs":{"Monarch":{"xref_id":"0001038"}}}


id: MONDO:0006343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the ovary and is characterized by the presence of malignant epithelial cells that resemble malignant urothelial cells. There is no morphologic evidence of a benign or borderline Brenner tumor component present.","definition_xrefs":["NCIT:C5240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian carcinoma","termid":"MONDO:0005140"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian transitional cell carcinoma","secondary_identifiers":["DOID:4000","EFO:1000435","MEDGEN:233811","UMLS:C1335184"],"synonyms":[{"name":"malignant ovarian transitional cell neoplasm","type":"exact"},{"name":"ovarian transitional cell cancer","type":"exact"},{"name":"ovarian transitional cell carcinoma","type":"exact"},{"name":"ovarian transitional cell neoplasm","type":"related"},{"name":"ovary transitional cell carcinoma","type":"exact"},{"name":"transitional cell carcinoma of ovary","type":"exact"},{"name":"transitional cell carcinoma of the ovary","type":"exact"}],"termid":"MONDO:0006343","xrefs":{"Monarch":{"xref_id":"0006343"}}}


id: PBO:0083131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual endo- and exopolyphosphatase with a role in phosphate metabolism; acts as both an endopolyphosphatase cleaving long chains of polyphosphate distributively to generate shorter polymer chains and as an exopolyphosphatase catalyzing the hydrolysis of terminal phosphate from polyphosphate; localizes to the vacuole, nucleus and cytosol; functions as a homodimer; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0083131"}


id: GO:2001302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"lipoxin metabolic process","termid":"GO:2001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lipoxin A4 metabolic process","synonyms":[{"name":"LXA4 metabolic process","type":"exact"},{"name":"LXA4 metabolism","type":"exact"},{"name":"lipoxin A4 metabolism","type":"exact"}],"termid":"GO:2001302"}


id: MONDO:0060759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures","secondary_identifiers":["OMIM:618088","MEDGEN:1648345","DOID:0081327","GARD:22396","UMLS:C4748127","Orphanet:597623"],"synonyms":[{"name":"IRF2BPL-related regressive neurodevelopmental disorder-dystonia-seizures syndrome","type":"exact"},{"name":"NEDAMSS","type":"related"},{"name":"neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures","type":"exact"}],"termid":"MONDO:0060759","xrefs":{"Monarch":{"xref_id":"0060759"}}}


id: GO:0047428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + 4-chlorophenylacetonitrile = 4-chlorophenylacetate + NH3.","definition_xrefs":["EC:3.5.5.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arylacetonitrilase activity","secondary_identifiers":["RHEA:20657","MetaCyc:3.5.5.5-RXN"],"synonyms":[{"name":"arylacetonitrile aminohydrolase activity","type":"related"}],"termid":"GO:0047428"}


id: MONDO:0975755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eccrine angiomatous hamartoma","secondary_identifiers":["MEDGEN:98361","UMLS:C0406801","Orphanet:673568"],"termid":"MONDO:0975755","xrefs":{"Monarch":{"xref_id":"0975755"}}}


id: PBO:0030461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_biotin_import","termid":"PBO:0030461"}


id: PBO:0062570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AK member 1 pseudogene","termid":"PBO:0062570"}


id: GO:0060090
data:
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id: MONDO:0018810
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal hydranencephaly-diaphragmatic hernia syndrome is a rare, genetic, lethal, multiple congenital anomalies syndrome characterized by hydranencephaly and diaphragmatic hernia, as well as macrocephaly, a widely open anterior fontanel, scaphoid abdomen and hypotonia. Additionally, congenital heart defects, polyhydramnios and pulmonary hypertension have also been associated.","definition_xrefs":["Orphanet:480528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal hydranencephaly-diaphragmatic hernia syndrome","secondary_identifiers":["MEDGEN:1798950","GARD:21978","UMLS:C5567527"],"termid":"MONDO:0018810","xrefs":{"Monarch":{"xref_id":"0018810"}}}


id: GO:1901147
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id: PR:Q9P802
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id: GO:1902750
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id: PBO:0001993
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id: MONDO:0020251
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare strabismus and restriction syndrome (obsolete MONDO:0020251)","secondary_identifiers":["Orphanet:98681"],"termid":"MONDO:0020251","xrefs":{"Monarch":{"xref_id":"0020251"}}}


id: PBO:0047028
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id: PBO:0077459
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 184B","termid":"PBO:0077459"}


id: PBO:0041818
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein regulator and myosin 1 linker 3","termid":"PBO:0041818"}


id: GO:0097162
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id: MONDO:0010485
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  {"annotated_genes":["SJAG_03603"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87072],"is_not":false,"summary":null,"term":"MONDO:0010485"}]},"cv_name":"mondo","definition":"X-linked colobomatous microphthalmia-microcephaly-intellectual disability-short stature syndrome is a rare syndromic microphthalmia disorder characterized by microphthalmia with coloboma (which may involve the iris, cilary body, choroid, retina and/or optic nerve), microcephaly, short stature and intellectual disability. Other eye abnormalities such as pendular nystagmus, esotropia and ptosis may also be present. Additional associated abnormalities include kyphoscoliosis, anteverted pinnae with minimal convolutions, diastema of the incisors and congenital pes varus.","definition_xrefs":["Orphanet:431140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked colobomatous microphthalmia-microcephaly-intellectual disability-short stature syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3806742","MEDGEN:813072","OMIM:300915","DOID:0111811","GARD:17709"],"synonyms":[{"name":"MCOPS13","type":"related"},{"name":"Maine microphthalmos","type":"related"},{"name":"X-linked colobomatous microphthalmia-microcephaly-short stature-psychomotor retardation syndrome","type":"exact"},{"name":"colobomatous microphthalmia with microcephaly, short stature, and psychomotor retardation","type":"related"},{"name":"microphthalmia, syndromic 13","type":"related"},{"name":"microphthalmia, syndromic type 13","type":"exact"}],"termid":"MONDO:0010485","terms_by_termid":{"MONDO:0010485":null},"xrefs":{"Monarch":{"xref_id":"0010485"}}}


id: GO:0120512
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id: FYPO:0000590
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121517,121520],"is_not":false,"summary":null,"term":"FYPO:0000590"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal sporulation","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"synonyms":[{"name":"normal ascospore formation","type":"exact"},{"name":"sporulation: normal","type":"related"}],"termid":"FYPO:0000590","terms_by_termid":{"FYPO:0000590":null}}


id: MONDO:0006534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of physical urticarias (or hives) that appears when a person is sweating.","definition_xrefs":["EFO:1000679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical urticaria","termid":"MONDO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cholinergic urticaria","secondary_identifiers":["DOID:14443","SCTID:73098005","ICD9:708.5","MEDGEN:508939","UMLS:C0152230","icd11.foundation:855107748","Wikipedia:Cholinergic_urticaria","ICD10CM:L50.5"],"termid":"MONDO:0006534","xrefs":{"Monarch":{"xref_id":"0006534"}}}


id: PBO:0017454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-interacts_with","termid":"PBO:0017454"}


id: PBO:0055591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3027","termid":"PBO:0055591"}


id: GO:1905567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport.","definition_xrefs":["PMID:22848640","GOC:TermGenie","GO_REF:0000058","GOC:nc","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport (obsolete GO:1905567)","synonyms":[{"name":"activation of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"narrow"},{"name":"positive regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"}],"termid":"GO:1905567"}


id: GO:0021814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell along the process of a radial glial cell involved in cerebral cortex glial-mediated radial migration.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"cell locomotion involved in cerebral cortex glial-mediated radial migration","type":"exact"},{"name":"cell locomotion involved in cerebral cortex radial glia guided migration","type":"related"}],"termid":"GO:0021814"}


id: PBO:0088139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein component of the retromer; forms part of the multimeric membrane-associated retromer complex involved in vacuolar protein sorting along with Vps35p, Vps29p, Vps17p, and Vps5p; essential for endosome-to-Golgi retrograde protein transport; interacts with Ypt7p; protein abundance increases in response to DNA replication stress","termid":"PBO:0088139"}


id: PATO:0001127
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001127 work value (obsolete PATO:0001127)","termid":"PATO:0001127"}


id: MONDO:1010494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, sheep","secondary_identifiers":["OMIA:001041-9940"],"termid":"MONDO:1010494","xrefs":{"Monarch":{"xref_id":"1010494"}}}


id: PBO:0112850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 9-3","termid":"PBO:0112850"}


id: PBO:0039797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3","termid":"PBO:0039797"}


id: PBO:0078871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 5","termid":"PBO:0078871"}


id: MONDO:0003425
data:
  {"annotated_genes":["SJAG_06022","SJAG_04665","SJAG_04816","SJAG_04183","SJAG_02050","SJAG_00885","SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[88346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[86980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[87349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[88161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[86942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[88232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[87874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","definition":"Weakness or paralysis of at least one of the muscles controlling the movement of the eye. It results from degeneration of the muscles or the neural pathways involved in the eye movement. Representative disorders causing ophthalmoplegia include ocular myopathies and multiple sclerosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular motility disease","termid":"MONDO:0001584"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02050":null,"SJAG_02658":null,"SJAG_04183":null,"SJAG_04665":null,"SJAG_04816":null,"SJAG_06022":null},"genotype_count":0,"is_obsolete":false,"name":"ophthalmoplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:378.56","MEDGEN:45205","icd11.foundation:1848588735","UMLS:C0029089","SCTID:78097002","DOID:539","MESH:D009886"],"synonyms":[{"name":"oculomotor paralysis","type":"related"},{"name":"total ophthalmoplegia","type":"exact"}],"termid":"MONDO:0003425","terms_by_termid":{"MONDO:0009783":null,"MONDO:0012238":null,"MONDO:0013117":null,"MONDO:0014062":null,"MONDO:0014656":null,"MONDO:0020845":null,"MONDO:0024528":null,"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0003425"}}}


id: PBO:0069113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 362, pseudogene","termid":"PBO:0069113"}


id: PBO:0076322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNPR antisense RNA 1","termid":"PBO:0076322"}


id: FYPO:0007772
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121252,121253,121259,121260,121365,121633,121634,121641],"is_not":false,"summary":null,"term":"FYPO:0007772"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which reformation of the nuclear envelope after mitotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah","PMID:32109380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01745":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_05207":null},"genotype_count":5,"genotypes_by_uniquename":{"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of mitotic nuclear membrane reassembly","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_01745","SJAG_05207","SJAG_01242","SJAG_03892","SJAG_03891"],"single_locus_genotype_uniquenames":["vps32delta","cmp7delta","vps4delta","alx1delta","lem2delta"],"synonyms":[{"name":"delayed mitotic nuclear membrane reassembly","type":"exact"},{"name":"delayed onset of mitotic nuclear envelope reassembly","type":"related"},{"name":"delayed onset of mitotic nuclear membrane reassembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitotic nuclear membrane reassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007772","terms_by_termid":{"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0080441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VRK serine/threonine kinase 2","termid":"PBO:0080441"}


id: MONDO:0017507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Congenital absence/hypoplasia of thumb, bilateral is a rare developmental defect during embryogenesis characterized by bilateral underdevelopment of the thumbs, ranging from a slight decrease in thumb size to complete absence of the thumbs. This anomaly counts for 20-60% of thumb hypoplasias.","definition_xrefs":["Orphanet:295112"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital absence/hypoplasia of thumb, bilateral (obsolete MONDO:0017507)","synonyms":[{"name":"thumb hypodactyly, bilateral","type":"exact"},{"name":"thumb oligodactyly, bilateral","type":"exact"}],"termid":"MONDO:0017507","xrefs":{"Monarch":{"xref_id":"0017507"}}}


id: PBO:0041660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 5","termid":"PBO:0041660"}


id: PBO:0055912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 36","termid":"PBO:0055912"}


id: GO:0030997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the two centrioles within a centrosome remain tightly paired; may be mediated by the assembly and disassembly of a proteinaceous linker.","definition_xrefs":["PMID:11076968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"},{"relation_name":"regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"}


id: GO:1901779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentalenolactone.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:17178094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"pentalenolactone metabolic process","termid":"GO:1901778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pentalenolactone catabolic process","synonyms":[{"name":"pentalenolactone breakdown","type":"exact"},{"name":"pentalenolactone catabolism","type":"exact"},{"name":"pentalenolactone degradation","type":"exact"}],"termid":"GO:1901779"}


id: GO:0045138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the adult male tail tip is generated and organized. In some species of rhabitid nematodes, the male tail tip undergoes a morphological change such that the most posterior hypodermal cells in the tail (hyp8-11 in C. elegans) fuse and retract anteriorly, changing the shape of the tail from a pointed, tapered cone, or spike, to a rounded, blunt dome.","definition_xrefs":["PMID:21408209","PMID:16806150","GOC:kmv","PMID:18050419","PMID:7409314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male anatomical structure morphogenesis","termid":"GO:0090598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode male tail tip morphogenesis","synonyms":[{"name":"male tail morphogenesis","type":"broad"},{"name":"male tail tip morphogenesis","type":"related"},{"name":"tail tip morphogenesis","type":"related"}],"termid":"GO:0045138"}


id: GO:0005358
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119203],"is_not":false,"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constitutive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose:proton symporter activity","termid":"GO:0005356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"high-affinity D-glucose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high-affinity glucose:proton symporter activity","type":"exact"},{"name":"high-affinity hydrogen/glucose transporter activity","type":"broad"},{"name":"high-affinity hydrogen:glucose symporter activity","type":"exact"},{"name":"high-affinity hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005358","terms_by_termid":{"GO:0005358":null}}


id: PBO:0045881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 5","termid":"PBO:0045881"}


id: FYPO:0003807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitochondria form branched structures.","definition_xrefs":["PMID:19373772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"net-like mitochondrial morphology","synonyms":[{"name":"branched mitochondria","type":"exact"},{"name":"branched mitochondria during vegetative growth","type":"exact"},{"name":"branched mitochondrion","type":"exact"}],"termid":"FYPO:0003807"}


id: SO:0000261
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a glycine anticodon, and a 3' glycine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"glycine_tRNA_primary_transcript","termid":"SO:0000218"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycyl_tRNA","synonyms":[{"name":"glycyl tRNA","type":"exact"},{"name":"glycyl-transfer RNA","type":"related"},{"name":"glycyl-transfer ribonucleic acid","type":"related"}],"termid":"SO:0000261"}


id: PR:Q10264
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pso2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA cross-link repair protein pso2/snm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.01c","synonyms":[{"name":"Spom972h-pso2","type":"exact"}],"termid":"PR:Q10264"}


id: GO:0008356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The asymmetric division of cells to produce two daughter cells with different developmental potentials. It is of fundamental significance for the generation of cell diversity.","definition_xrefs":["PMID:11672519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric cell division","secondary_identifiers":["Wikipedia:Asymmetric_cell_division"],"synonyms":[{"name":"asymmetric cytokinesis","type":"related"},{"name":"asymmetrical cell division","type":"exact"},{"name":"asymmetrical cytokinesis","type":"related"}],"termid":"GO:0008356"}


id: PBO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.105","termid":"PBO:0000697"}


id: FYPO:0007144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of deoxyribonuclease (pyrimidine dimer) activity is increased during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"},{"relation_name":"is_a","term_name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased deoxyribonuclease (pyrimidine dimer) activity during cellular response to UV","synonyms":[{"name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity during cellular response to UV","type":"narrow"},{"name":"increased deoxyribonuclease (pyrimidine dimer) activity during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0007144"}


id: PR:Q9UTC3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication complex GINS protein PSF3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22768:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication complex GINS protein psf3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.16c","secondary_identifiers":["UniProtKB:Q9UTC3"],"synonyms":[{"name":"SPAC227.16c","type":"related"},{"name":"Spom972h-GINS3","type":"exact"}],"termid":"PR:Q9UTC3"}


id: PBO:0028496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_via_N-end_rule_pathway_during_vegetative_growth","termid":"PBO:0028496"}


id: GO:0010017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:lr","GOC:mtg_far_red","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"cellular response to red or far red light","termid":"GO:0071489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"red or far-red light signaling pathway","synonyms":[{"name":"phytochrome signaling pathway","type":"broad"},{"name":"red or far red light signaling pathway","type":"exact"},{"name":"red or far-red light signal transduction","type":"exact"},{"name":"red or far-red light signalling pathway","type":"exact"},{"name":"red/far red light signaling pathway","type":"exact"}],"termid":"GO:0010017"}


id: GO:0003216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a left cardiac atrium from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac atrium formation","termid":"GO:0003210"},{"relation_name":"part_of","term_name":"cardiac left atrium morphogenesis","termid":"GO:0003212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left atrium formation","termid":"GO:0003216"}


id: GO:0071793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bacillithiol, the alpha-anomeric glycoside of L-cysteinyl-D-glucosamine with L-malic acid. Bacillithiol, produced widely in the Firmicutes and sporadically in other bacterial lineages, is a low-molecular-weight thiol analogous to mycothiol in the Actinomycetes and glutathione in many species.","definition_xrefs":["GOC:dh","PMID:20308541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"bacillithiol metabolic process","termid":"GO:0071792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"bacillithiol biosynthetic process","synonyms":[{"name":"bacillithiol anabolism","type":"exact"},{"name":"bacillithiol biosynthesis","type":"exact"},{"name":"bacillithiol formation","type":"exact"},{"name":"bacillithiol synthesis","type":"exact"}],"termid":"GO:0071793"}


id: GO:0070721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that consists of a Stat1-Stat2 heterodimer and the IRF9 protein.","definition_xrefs":["PMID:8943351","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"ISGF3 complex","synonyms":[{"name":"interferon-stimulated gene factor 3 transcription complex","type":"exact"}],"termid":"GO:0070721"}


id: PR:O74478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1840.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribomutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.05c","synonyms":[{"name":"PGM 3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PRM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1840.05c","type":"exact"},{"name":"phosphoglucomutase 3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74478"}


id: PBO:0080232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"very low density lipoprotein receptor","termid":"PBO:0080232"}


id: MONDO:1012787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuroaxonal dystrophy that occurs in dogs due to a mutation in the PLA2G6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"neuroaxonal dystrophy, dog","termid":"MONDO:1011561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy, PLA2G6-related, dog","secondary_identifiers":["OMIA:002105-9615"],"termid":"MONDO:1012787","xrefs":{"Monarch":{"xref_id":"1012787"}}}


id: MONDO:0020509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary syringomyelia is a rare medullar disease defined as a development of a fluid-filled cavity or syrinx within the spinal cord due to blockage of CSF circulation (e.g., due to basal archnoiditis, meningeal carcinomatosis, various mass lesions), spinal cord injury (e.g., due to trauma, radiation necrosis, hemorrhage, spinal abscess), spinal dysraphism or intramedullary tumors. It presents with neuropathic pain, numbness, muscular weakness, changes in tone or spasticity or autonomic changes (hyperhidrosis, heart rate or blood pressure instability). Selective loss of pain and temperature with relative preservation of dorsal column function (touch and pressure) are classic findings.","definition_xrefs":["Orphanet:99857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syringomyelia","termid":"MONDO:0017987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary syringomyelia","secondary_identifiers":["GARD:19692","MEDGEN:1649806","UMLS:C4749399"],"termid":"MONDO:0020509","xrefs":{"Monarch":{"xref_id":"0020509"}}}


id: MONDO:0013220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hemochromatosis type 2 in which the cause of the disease is a mutation in the HAMP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemochromatosis type 2","termid":"MONDO:0019257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hemochromatosis type 2B","secondary_identifiers":["MEDGEN:356040","DOID:0111032","UMLS:C1865616","GARD:15647","MESH:C566557","OMIM:613313"],"synonyms":[{"name":"HAMP hemochromatosis type 2","type":"exact"},{"name":"HFE2B","type":"exact"},{"name":"hemochromatosis type 2 caused by mutation in HAMP","type":"exact"},{"name":"hemochromatosis, type 2B","type":"related"}],"termid":"MONDO:0013220","xrefs":{"Monarch":{"xref_id":"0013220"}}}


id: PBO:0088636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease, involved in lipid metabolism","termid":"PBO:0088636"}


id: PBO:0087319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm-like protein involved in docking and fusion of exocytic vesicles; binds to assembled SNARE complexes at the membrane and stimulates membrane fusion; localization to sites of secretion (bud neck and bud tip) is dependent on SNARE function; interacts directly with essential exocyst subunit Sec6p","termid":"PBO:0087319"}


id: PBO:0013450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase/ flavoprotein fusion protein (predicted)","termid":"PBO:0013450"}


id: PBO:0056342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP4K1 antisense RNA 1","termid":"PBO:0056342"}


id: GO:0008352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex possessing an activity that couples ATP hydrolysis to the severing of microtubules; usually a heterodimer comprising a catalytic subunit (often 60kDa) and a regulatory subunit (often 80 kDa).","definition_xrefs":["PMID:10910766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"part_of","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0032991","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"katanin complex","termid":"GO:0008352"}


id: PBO:0075910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 2","termid":"PBO:0075910"}


id: PR:O60131
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C16G5.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.17","synonyms":[{"name":"Spom972h-SPBC16G5.17","type":"exact"}],"termid":"PR:O60131"}


id: MONDO:0006621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Seborrheic keratosis that arises from follicular structures in the vulva. It is characterized by the presence of prominent squamous eddies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted follicular keratosis","termid":"MONDO:0006563"},{"relation_name":"is_a","term_name":"vulvar seborrheic keratosis","termid":"MONDO:0006622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"vulvar inverted follicular keratosis","secondary_identifiers":["MEDGEN:274414","DOID:6943","NCIT:C40291","UMLS:C1520084"],"synonyms":[{"name":"inverted follicular keratosis of mammalian vulva","type":"exact"},{"name":"mammalian vulva inverted follicular keratosis","type":"exact"}],"termid":"MONDO:0006621","xrefs":{"Monarch":{"xref_id":"0006621"}}}


id: MONDO:0015387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nasolacrimal duct cyst describes a unilateral or bilateral congenital cyst of the nasolacrimal duct, which is almost always associated with dacryocystocele, presenting most commonly at birth or a few weeks of age (but rarely presenting in adulthood) as a benign, grayish blue mass in the inferomedial canthus or in the nasal cavity, that can cause epiphora, dacryocystitis (inflammation of the lacrimal sac) and nasal obstruction. It is more commonly reported in females.","definition_xrefs":["Orphanet:141083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"},{"relation_name":"is_a","term_name":"nasolacrimal duct disorder","termid":"MONDO:0044984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nasolacrimal duct cyst","secondary_identifiers":["GARD:19944","UMLS:C5575612","MEDGEN:1810477"],"synonyms":[{"name":"dacryocele","type":"exact"},{"name":"dacryocystocele","type":"related"},{"name":"nasolacrimal mucocele","type":"exact"}],"termid":"MONDO:0015387","xrefs":{"Monarch":{"xref_id":"0015387"}}}


id: FYPO:0007962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal after nitrogen removal.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased mating efficiency during nitrogen starvation","termid":"FYPO:0007962"}


id: GO:0043961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + (R)-citramalate = succinate + (R)-citramalyl-CoA.","definition_xrefs":["PMID:17259315","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"succinyl-CoA:(R)-citramalate CoA-transferase activity","secondary_identifiers":["EC:2.8.3.20","RHEA:38279","MetaCyc:RXN-8966"],"synonyms":[{"name":"L-carnitine dehydratase/bile acid-inducible protein F","type":"related"},{"name":"succinyl-CoA:(R)-citramalate CoA transferase activity","type":"exact"},{"name":"succinyl-CoA:R-citramalate CoA transferase","type":"exact"}],"termid":"GO:0043961"}


id: PBO:0070442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3","termid":"PBO:0070442"}


id: FYPO:0004102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of polyubiquitination of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination during vegetative growth","termid":"FYPO:0002768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein polyubiquitination during vegetative growth","synonyms":[{"name":"decreased protein multiubiquitination during vegetative growth","type":"exact"},{"name":"decreased protein polyubiquitination during mitotic cell cycle","type":"related"},{"name":"decreased protein polyubiquitinylation during vegetative growth","type":"exact"},{"name":"decreased protein polyubiquitylation during vegetative growth","type":"exact"},{"name":"reduced protein polyubiquitination during vegetative growth","type":"exact"}],"termid":"FYPO:0004102"}


id: PBO:0027000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_prospore_membrane_formation","termid":"PBO:0027000"}


id: GO:0031728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR3 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CCR3 chemokine receptor binding","synonyms":[{"name":"CCR3 chemokine receptor ligand","type":"narrow"},{"name":"eosinophil eotaxin receptor binding","type":"exact"}],"termid":"GO:0031728"}


id: MONDO:0001915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease of orbital part of eye adnexa","termid":"MONDO:0004751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orbital cyst","secondary_identifiers":["ICD9:376.81","UMLS:C0155285","MEDGEN:56359","icd11.foundation:1244231313","DOID:14233","SCTID:31021007","HP:0001144"],"synonyms":[{"name":"orbit cyst","type":"exact"}],"termid":"MONDO:0001915","xrefs":{"Monarch":{"xref_id":"0001915"}}}


id: GO:0042313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the inhibition or termination of the activity of protein kinase C.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"protein kinase C deactivation","synonyms":[{"name":"PKC deactivation","type":"exact"}],"termid":"GO:0042313"}


id: PBO:0005863
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this may be a none coding RNA","termid":"PBO:0005863"}


id: MONDO:0010825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrioventricular defect-blepharophimosis-radial and anal defect syndrome is a rare, genetic multiple congenital anomaly syndrome characterized by atrioventricular septal defects and blepharophimosis, in addition to radial (e.g. aplastic radius, shortened ulna, fifth finger clinodactyly, absent first metacarpal and thumb) and anal (e.g. imperforate or anteriorly place anus, rectovaginal fistula) defects.","definition_xrefs":["Orphanet:1352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrioventricular defect-blepharophimosis-radial and anal defect syndrome","secondary_identifiers":["MEDGEN:374010","MESH:C563994","OMIM:600123","UMLS:C1838606","GARD:2742"],"synonyms":[{"name":"Houlston-Ironton-Temple syndrome","type":"exact"},{"name":"atrioventricular septal defect with blepharophimosis and anal and radial defects","type":"related"}],"termid":"MONDO:0010825","xrefs":{"Monarch":{"xref_id":"0010825"}}}


id: PBO:0053568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 583","termid":"PBO:0053568"}


id: PBO:0081813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 6, Y-linked","termid":"PBO:0081813"}


id: GO:0141151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of nitric oxide-cGMP mediated signal transduction.","definition_xrefs":["PMID:35931019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nitric oxide mediated signal transduction","termid":"GO:0010751"},{"relation_name":"is_a","term_name":"negative regulation of cGMP-mediated signaling","termid":"GO:0010754"},{"relation_name":"is_a","term_name":"regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141149"},{"relation_name":"negatively_regulates","term_name":"nitric oxide-cGMP-mediated signaling","termid":"GO:0038060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141151"}


id: PBO:0075368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 6","termid":"PBO:0075368"}


id: GO:0080099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine + 2-oxoglutarate = 4-methylthio-2-oxobutyrate + L-glutamate.","definition_xrefs":["PMID:18394996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methionine-oxo-acid transaminase activity","termid":"GO:0010326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-methionine:2-oxoglutarate aminotransferase activity","synonyms":[{"name":"L-methionine:alpha-ketoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0080099"}


id: PBO:0049763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4B","termid":"PBO:0049763"}


id: GO:0055065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of metal ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:ai","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete metal ion homeostasis (obsolete GO:0055065)","termid":"GO:0055065"}


id: PBO:0060974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYC pseudogene 1","termid":"PBO:0060974"}


id: PR:P36615
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase csk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.06c","synonyms":[{"name":"CAK-activating kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CAKAK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-csk1","type":"exact"}],"termid":"PR:P36615"}


id: MONDO:0700338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammation, panniculitis, and dermatosis syndrome","termid":"MONDO:0975955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoinflammation, panniculitis, and dermatosis syndrome, autosomal dominant","secondary_identifiers":["OMIM:621030"],"termid":"MONDO:0700338","xrefs":{"Monarch":{"xref_id":"0700338"}}}


id: GO:0001864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pentraxin, a member of a family of inflammatory proteins with a radially symmetric arrangement of five identical, noncovalently linked chains in a pentagonal array.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pentraxin binding","termid":"GO:0001864"}


id: GO:1902296
data:
  {"annotated_genes":["SJAG_00729","SJAG_01010","SJAG_04879","SJAG_00863","SJAG_02182","SJAG_00814","SJAG_02908","SJAG_03780","SJAG_01823","SJAG_00874","SJAG_02199","SJAG_03495","SJAG_04877","SJAG_05197","SJAG_02667","SJAG_02818","SJAG_00272","SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114484,115539,72097,117387,66893,68993,111895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[111055,120186,106854,97100,104729,106132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[106133,106855,91399,97101,109283,95808,108912,97133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any DNA strand elongation that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in DNA replication","termid":"GO:0006271"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_01010":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"DNA strand elongation involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"DNA replication elongation involved in cell cycle DNA replication","type":"exact"},{"name":"DNA strand elongation during DNA replication involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902296","terms_by_termid":{"GO:1902983":null,"GO:1903459":null,"GO:1903460":null}}


id: PBO:0005286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Ipi1 (predicted)","termid":"PBO:0005286"}


id: PBO:0109143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane integral protein involved in protein targeting to mitochondrion Ema19","termid":"PBO:0109143"}


id: PBO:0066496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 7","termid":"PBO:0066496"}


id: GO:1900249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytoplasmic translational elongation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational elongation","termid":"GO:0045901"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation","termid":"GO:1900247"},{"relation_name":"positively_regulates","term_name":"cytoplasmic translational elongation","termid":"GO:0002182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cytoplasmic translational elongation","synonyms":[{"name":"activation of cytoplasmic translational elongation","type":"narrow"},{"name":"up regulation of cytoplasmic translational elongation","type":"exact"},{"name":"up-regulation of cytoplasmic translational elongation","type":"exact"},{"name":"upregulation of cytoplasmic translational elongation","type":"exact"}],"termid":"GO:1900249"}


id: PBO:0001961
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target genes transcriptionally co-regulated by Mcs6","termid":"PBO:0001961"}


id: PBO:0082467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium permeable gated cation channel; functions as an osmosensitive, calcium-permeable cation channel when expressed in a heterologous system; may be involved in detoxification; similar to Arabidopsis CSC1","termid":"PBO:0082467"}


id: PBO:0089559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor G Mef1","termid":"PBO:0089559"}


id: PBO:0066675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinaldehyde binding protein 1","termid":"PBO:0066675"}


id: PBO:0048493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 5","termid":"PBO:0048493"}


id: GO:1903097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of the formation of nucleosomes containing the histone H3 variant CENP-A to form centromeric chromatin. This specialised chromatin occurs at centromeric region in point centromeres, and the central core in modular centromeres.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24710126"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of CENP-A containing nucleosome assembly (obsolete GO:1903097)","synonyms":[{"name":"regulation of CENP-A deposition","type":"related"},{"name":"regulation of CENP-A loading","type":"related"},{"name":"regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"regulation of centromere specific nucleosome exchange","type":"related"},{"name":"regulation of centromere-specific histone exchange","type":"exact"},{"name":"regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"GO:1903097"}


id: MONDO:0013694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 31","secondary_identifiers":["DOID:0081191","MEDGEN:482153","OMIM:614329","GARD:22553","UMLS:C3280523"],"synonyms":[{"name":"MRT31","type":"exact"},{"name":"intellectual disability, autosomal recessive 31","type":"exact"},{"name":"mental retardation, autosomal recessive 31","type":"related"}],"termid":"MONDO:0013694","xrefs":{"Monarch":{"xref_id":"0013694"}}}


id: GO:0018719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-aminohexanoate + alpha-ketoglutarate = glutamate + 6-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r0449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"6-aminohexanoate transaminase activity","secondary_identifiers":["MetaCyc:R562-RXN"],"termid":"GO:0018719"}


id: SO:0000868
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift caused by inserting one base.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift","termid":"SO:0000865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_1_frameshift","synonyms":[{"name":"plus 1 frameshift","type":"exact"}],"termid":"SO:0000868"}


id: PBO:0050283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor serpin domain containing","termid":"PBO:0050283"}


id: GO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reflex that occurs in response to suckling, beginning with a nerve impulse from a receptor in the mammary gland and ending with the ejection of milk from the gland. Signaling never reaches a level of consciousness.","definition_xrefs":["GOC:dph","GOC:st","GOC:cjm","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"},{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"},{"relation_name":"part_of","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"milk ejection reflex","synonyms":[{"name":"milk ejection","type":"exact"}],"termid":"GO:0060156"}


id: MONDO:0019131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ossification anomalies-psychomotor developmental delay syndrome is characterized by hypomineralisation of the cranial bones, thoracic dystrophy, hypotonia, and abnormal and slender long bones due to an alteration in remodeling during ossification.","definition_xrefs":["Orphanet:73230"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with defective bone mineralization (obsolete MONDO:0019705)","termid":"MONDO:0019705"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ossification anomalies-psychomotor developmental delay syndrome","secondary_identifiers":["GARD:18921","UMLS:C4302826","MEDGEN:928495"],"termid":"MONDO:0019131","xrefs":{"Monarch":{"xref_id":"0019131"}}}


id: GO:0044210
data:
  {"annotated_genes":["SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64132],"is_not":false,"summary":null,"term":"GO:0044210"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytidine 5'-triphosphate (CTP) from simpler components.","definition_xrefs":["PMID:11912132","GOC:ecd","PMID:18439916","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CTP biosynthetic process","termid":"GO:0006241"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"'de novo' CTP biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"'de novo' cytidine 5'-triphosphate biosynthetic process","type":"exact"}],"termid":"GO:0044210","terms_by_termid":{"GO:0044210":null}}


id: GO:0061939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another using c-di-GMP as the signal.","definition_xrefs":["PMID:22864416","PMID:28057864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"c-di-GMP signaling","synonyms":[{"name":"3',5'-cyclic di-GMP signaling","type":"exact"},{"name":"cyclic di-(3':5')-guanosine monophosphate signaling","type":"exact"},{"name":"cyclic di-GMP signaling","type":"exact"},{"name":"cyclic diguanylate signaling","type":"exact"}],"termid":"GO:0061939"}


id: GO:0047222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,3-alpha-D-mannosyl-1,2-alpha-D-mannosyl-1,2-alpha-D-mannosyl-D-mannose + UDP-N-acetyl-D-glucosamine = 1,3-alpha-D-mannosyl-1,2-(N-acetyl-alpha-D-glucosaminyl-alpha-D-mannosyl)-1,2-alpha-D-mannosyl-D-mannose + UDP.","definition_xrefs":["MetaCyc:2.4.1.138-RXN","EC:2.4.1.138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannotetraose 2-alpha-N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:13705"],"synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:mannotetraose alpha-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"alpha-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine mannoside alpha1->2-alphacetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047222"}


id: PBO:0108975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule associated protein 2","termid":"PBO:0108975"}


id: MONDO:0010207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wooly hair-hypotrichosis-everted lower lip-outstanding ears syndrome","secondary_identifiers":["Orphanet:1409","MEDGEN:98033","SCTID:239023005","UMLS:C0406718","MESH:C536746","OMIM:278200"],"synonyms":[{"name":"Salamon syndrome","type":"exact"},{"name":"woolly hair hypotrichosis everted lower lip and outstanding ears","type":"related"},{"name":"woolly hair, hypotrichosis, everted LOWER LIP, and outstanding ears","type":"related"},{"name":"wooly hair hypotrichosis everted lower lip and outstanding ears","type":"related"},{"name":"wooly hair, hypotrichosis, everted LOWER LIP, and outstanding ears","type":"related"},{"name":"wooly hair-hypotrichosis-everted lower lip-outstanding ears syndrome","type":"exact"}],"termid":"MONDO:0010207","xrefs":{"Monarch":{"xref_id":"0010207"}}}


id: PBO:0073759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 13","termid":"PBO:0073759"}


id: GO:0031287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sorocarp stalk cell differentiation. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["PMID:4338436","GOC:mtg_sensu","GOC:kp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sorocarp stalk cell differentiation","termid":"GO:0031285"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"positively_regulates","term_name":"sorocarp stalk cell differentiation","termid":"GO:0031149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sorocarp stalk cell differentiation","synonyms":[{"name":"activation of stalk cell differentiation","type":"narrow"},{"name":"positive regulation of stalk cell differentiation","type":"exact"},{"name":"stimulation of stalk cell differentiation","type":"narrow"},{"name":"up regulation of stalk cell differentiation","type":"exact"},{"name":"up-regulation of stalk cell differentiation","type":"exact"},{"name":"upregulation of stalk cell differentiation","type":"exact"}],"termid":"GO:0031287"}


id: MONDO:0007925
data:
  {"annotated_genes":["SJAG_01548","SJAG_03424"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87536,87537],"is_not":false,"summary":null,"term":"MONDO:0007925"}]},"cv_name":"mondo","definition":"A myelodysplastic syndrome characterized by a deletion between bands q31 and 33 on chromosome 5. The number of blasts in the bone marrow and blood is <5%. The bone marrow is usually hypercellular or normocellular with increased number of often hypolobated megakaryocytes. The peripheral blood shows macrocytic anemia. This syndrome occurs predominantly but not exclusively in middle age to older women. The prognosis is good and transformation to acute leukemia is rare. (WHO, 2001)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrocytic anemia","termid":"MONDO:0002281"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 5","termid":"MONDO:0016904"},{"relation_name":"is_a","term_name":"myelodysplastic syndrome","termid":"MONDO:0018881"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01548":null,"SJAG_03424":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"myelodysplastic syndrome associated with isolated del(5q)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICDO:9986/3","Orphanet:86841","MEDGEN:196625","icd11.foundation:420472577","NCIT:C6867","OMIM:153550","DOID:0090016","UMLS:C0740302","GARD:8723","MESH:C535323","SCTID:277597005"],"synonyms":[{"name":"5Q minus syndrome","type":"exact"},{"name":"5Q- syndrome","type":"exact"},{"name":"5q deletion syndrome","type":"related"},{"name":"5q syndrome","type":"related"},{"name":"5q- syndrome","type":"exact"},{"name":"5q- syndrome, refractory macrocytic anaemia due to 5q deletion","type":"exact"},{"name":"5q- syndrome, refractory macrocytic anemia due to 5q deletion","type":"exact"},{"name":"MAR","type":"related"},{"name":"chromosome 5q deletion syndrome","type":"exact"},{"name":"macrocytic Anemia, refractory, due to 5Q deletion","type":"related"},{"name":"macrocytic anemia, refractory, due to 5q deletion, somatic","type":"exact"},{"name":"megakaryocytes, unilobular nucleated","type":"related"},{"name":"myelodysplastic syndrome associated with isolated del (5q) chromosome Abnormality","type":"exact"},{"name":"myelodysplastic syndrome associated with isolated del(5q) chromosome abnormality","type":"exact"},{"name":"myelodysplastic syndrome with 5q deletion","type":"exact"},{"name":"myelodysplastic syndrome with isolated del(5q)","type":"exact"},{"name":"refractory macrocytic anaemia due to 5q deletion","type":"related"},{"name":"refractory macrocytic anemia due to 5q deletion","type":"related"}],"termid":"MONDO:0007925","terms_by_termid":{"MONDO:0007925":null},"xrefs":{"Monarch":{"xref_id":"0007925"}}}


id: MONDO:0025066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute generalized dermatitis of pigs which occurs from 5 to 35 days of age, characterized by sudden onset, with morbidity of 10 to 90% and mortality of 5 to 90%. The lesions are caused by Staphylococcus hyos but the bacterial agent is unable to penetrate the intact skin. Abrasions on the feet and legs or lacerations on the body frequently precede infection. In acute cases, a vesicular-type virus may be the predisposing factor. The causative organism is inhibited by most antibiotics. (Merck Veterinary Manual, 5th ed)","definition_xrefs":["MESH:D004818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermitis, exudative, of swine","synonyms":[{"name":"Epidermitis, exudative of swine","type":"related"},{"name":"disease, greasy pig","type":"related"},{"name":"exudative dermatitis of swine","type":"related"},{"name":"greasy pig disease","type":"related"},{"name":"swine exudative Dermatitides","type":"related"},{"name":"swine exudative dermatitis","type":"related"}],"termid":"MONDO:0025066","xrefs":{"Monarch":{"xref_id":"0025066"}}}


id: FYPO:0003824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of caffeine and rapamycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to caffeine and rapamycin","synonyms":[{"name":"resistance to caffeine and rapamycin during mitotic cell cycle","type":"related"},{"name":"resistance to caffeine and rapamycin during vegetative growth","type":"exact"},{"name":"resistance to caffeine and rapamycin in combination","type":"exact"},{"name":"resistant to caffeine and rapamycin","type":"exact"}],"termid":"FYPO:0003824"}


id: PBO:0082534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; expressed under anaerobic conditions and required for anaerobic growth; transcription is also induced by cold shock; member of the Srp1p/Tip1p family of serine-alanine-rich proteins","termid":"PBO:0082534"}


id: GO:0034123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor signaling pathway","synonyms":[{"name":"positive regulation of TLR signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034123"}


id: MONDO:0008784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune hemolytic anemia (obsolete MONDO:0008784)","termid":"MONDO:0008784","xrefs":{"Monarch":{"xref_id":"0008784"}}}


id: PBO:0054414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1810","termid":"PBO:0054414"}


id: PBO:0039963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 6","termid":"PBO:0039963"}


id: PBO:0042240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 3","termid":"PBO:0042240"}


id: PBO:0085566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein disulfide isomerase of the endoplasmic reticulum lumen; EUG1 has a paralog, PDI1, that arose from the whole genome duplication; function overlaps with that of Pdi1p; may interact with nascent polypeptides in the ER","termid":"PBO:0085566"}


id: PBO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps45","termid":"PBO:0000603"}


id: PR:Q9HDW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma5 gene.","definition_xrefs":["UniProtKB:Q9HDW6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.05","synonyms":[{"name":"Spom972h-vma5","type":"exact"},{"name":"V-ATPase subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW6"}


id: PBO:0051563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12B","termid":"PBO:0051563"}


id: PBO:0000450
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses genes involved in iron uptake","termid":"PBO:0000450"}


id: PBO:0040839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell acute lymphoblastic leukemia expressed","termid":"PBO:0040839"}


id: SO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene with a start codon other than AUG.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"contains","term_name":"non_canonical_start_codon","termid":"SO:0000680"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_non_canonical_start_codon","synonyms":[{"name":"gene with non canonical start codon","type":"exact"}],"termid":"SO:0001739"}


id: GO:0106149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-carbonyl nitrile + NADPH +O2=4-hydroxyindole-3- carbonyl nitrile + NADP+ + H20.","definition_xrefs":["GOC:lr","PMID:26352477","RHEA:57864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"indole-3-carbonyl nitrile 4-hydroxylase activity","secondary_identifiers":["EC:1.14.14.165"],"termid":"GO:0106149"}


id: PBO:0034239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-target_participant_in","termid":"PBO:0034239"}


id: MONDO:0005385
data:
  {"annotated_genes":["SJAG_04745","SJAG_01181","SJAG_02923","SJAG_02580","SJAG_00993","SJAG_03453","SJAG_02063","SJAG_03785","SJAG_02342","SJAG_00169","SJAG_01344","SJAG_00210","SJAG_00737","SJAG_02485","SJAG_02977","SJAG_02218","SJAG_02582","SJAG_05213","SJAG_00495","SJAG_02959","SJAG_02648","SJAG_02431","SJAG_02286","SJAG_03258","SJAG_03145","SJAG_00364","SJAG_03081","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88887,88886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007568"},{"annotations":[86876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012730"},{"annotations":[88467,88465,88466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013768"},{"annotations":[87514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"},{"annotations":[87878,87877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010829"},{"annotations":[87744,87745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014768"},{"annotations":[87636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[88738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010557"},{"annotations":[89115,89114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012011"},{"annotations":[89125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007781"},{"annotations":[88267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013806"},{"annotations":[87434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007672"},{"annotations":[88739,88741,88740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008895"},{"annotations":[88724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"},{"annotations":[88266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[88290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[87769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013542"},{"annotations":[88142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[88720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013452"},{"annotations":[89073,89071,89072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[88874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"},{"annotations":[88883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009329"}]},"cv_name":"mondo","definition":"A general term used to describe any disease affecting blood vessels]. It includes vascular abnormalities caused by degenerative, metabolic and inflammatory conditions, embolic diseases, coagulative disorders, and functional disorders such as posteri or reversible encephalopathy syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00210":null,"SJAG_00364":null,"SJAG_00495":null,"SJAG_00737":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01344":null,"SJAG_02063":null,"SJAG_02218":null,"SJAG_02286":null,"SJAG_02342":null,"SJAG_02431":null,"SJAG_02485":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_02959":null,"SJAG_02977":null,"SJAG_03081":null,"SJAG_03145":null,"SJAG_03258":null,"SJAG_03453":null,"SJAG_03703":null,"SJAG_03785":null,"SJAG_04745":null,"SJAG_05213":null},"genotype_count":0,"is_obsolete":false,"name":"vascular disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C35117","ICD9:442.9","MEDGEN:22621","NANDO:2100294","EFO:0004264","DOID:178","UMLS:C0042373","MESH:D014652","SCTID:27550009","ICD10CM:I00-I99","ICD10CM:I70-I79"],"synonyms":[{"name":"disease of vasculature","type":"exact"},{"name":"disease or disorder of vasculature","type":"exact"},{"name":"disorder of vasculature","type":"exact"},{"name":"vascular disorder","type":"exact"},{"name":"vascular tissue disease","type":"exact"},{"name":"vasculature disease","type":"exact"},{"name":"vasculature disease or disorder","type":"exact"},{"name":"vasculopathy","type":"related"}],"termid":"MONDO:0005385","terms_by_termid":{"MONDO:0007154":null,"MONDO:0007568":null,"MONDO:0007672":null,"MONDO:0007781":null,"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0008895":null,"MONDO:0009329":null,"MONDO:0009796":null,"MONDO:0010557":null,"MONDO:0010829":null,"MONDO:0011257":null,"MONDO:0012011":null,"MONDO:0012371":null,"MONDO:0012730":null,"MONDO:0013186":null,"MONDO:0013452":null,"MONDO:0013458":null,"MONDO:0013542":null,"MONDO:0013644":null,"MONDO:0013768":null,"MONDO:0013805":null,"MONDO:0013806":null,"MONDO:0014768":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0005385"}}}


id: MONDO:0850461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fetal alcohol spectrum disorder that is characterized by one or more deficits in neurocognition and in self-regulation plus two or more deficits in adaptive functioning, with at least 1 in communication or social communication and interaction.","definition_xrefs":["DOID:0081052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal alcohol spectrum disorder","termid":"MONDO:0000408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobehavioral disorder with prenatal alcohol exposure","termid":"MONDO:0850461","xrefs":{"Monarch":{"xref_id":"0850461"}}}


id: PBO:0069216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 471, pseudogene","termid":"PBO:0069216"}


id: GO:0046730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The induction by a virus of an immune response in the host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host immune response (obsolete GO:0046730)","synonyms":[{"name":"activation of host immune response by virus","type":"exact"},{"name":"active induction of host immune response by virus","type":"related"},{"name":"active viral induction of host immune response","type":"related"},{"name":"passive activation of host immune response by virus","type":"narrow"},{"name":"passive induction of cell-mediated immune response in host by virus","type":"narrow"},{"name":"passive induction of host cell-mediated immune response by virus","type":"narrow"},{"name":"passive induction of host humoral immune response by virus","type":"narrow"},{"name":"passive induction of host immune response by virus","type":"narrow"},{"name":"passive induction of host innate immune response by virus","type":"narrow"},{"name":"passive induction of humoral immune response in host by virus","type":"narrow"},{"name":"passive induction of innate immune response in host by virus","type":"narrow"},{"name":"passive viral activation of cell-mediated immune response in host","type":"narrow"},{"name":"passive viral activation of humoral immune response in host","type":"narrow"},{"name":"passive viral activation of innate immune response in host","type":"narrow"},{"name":"passive viral induction of cell-mediated immune response in host","type":"narrow"},{"name":"passive viral induction of host immune response","type":"narrow"},{"name":"passive viral induction of humoral immune response in host","type":"narrow"},{"name":"passive viral induction of innate immune response in host","type":"narrow"}],"termid":"GO:0046730"}


id: PBO:0045193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 6","termid":"PBO:0045193"}


id: GO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell gliding that results from the actions of cell surface adhesin proteins that are propelled by membrane motor proteins.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell gliding","termid":"GO:0071976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell surface adhesin-mediated gliding motility","termid":"GO:0071980"}


id: GO:0019895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The activity of linking kinesins, cytoplasmic proteins responsible for moving vesicles and organelles towards the distal end of microtubules, to mitochondria.","definition_xrefs":["PMID:12495622"],"gene_count":0,"genotype_count":0,"name":"obsolete kinesin-associated mitochondrial adaptor activity (obsolete GO:0019895)","termid":"GO:0019895"}


id: MOD:00362
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-arginine residue and a two-iron two-sulfur cluster to tris-L-cysteinyl L-arginyl diiron disulfide.","definition_xrefs":["RESID:AA0357","PubMed:14704425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-arginine residue","termid":"MOD:02076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-arginyl diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"di-mu-sulfido(N(eta1)-arginyl-S-cysteinyliron)(bis-S-cysteinyliron)","type":"exact"},{"name":"tris-L-cysteinyl L-arginyl diiron disulfide","type":"exact"}],"termid":"MOD:00362"}


id: PBO:0043447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 8","termid":"PBO:0043447"}


id: FYPO:0000749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to selenite ((SeO3)2-) ions. Cells stop growing (and may die) at a concentration of selenite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to selenite ion","synonyms":[{"name":"hypersensitive to selenite ion","type":"exact"},{"name":"sensitive to selenite ion during mitotic cell cycle","type":"related"},{"name":"sensitive to selenite ion during vegetative growth","type":"exact"},{"name":"sensitive to selenite ions","type":"exact"},{"name":"sensitive to selenium","type":"related"}],"termid":"FYPO:0000749"}


id: MONDO:0014114
data:
  {"annotated_genes":["SJAG_00993","SJAG_02342","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86848,86849,86850],"is_not":false,"summary":null,"term":"MONDO:0014114"}]},"cv_name":"mondo","definition":"Any cardiofaciocutaneous syndrome in which the cause of the disease is a mutation in the MAP2K2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiofaciocutaneous syndrome","termid":"MONDO:0015280"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005093"],"is_obsolete":false,"name":"cardiofaciocutaneous syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15937","OMIM:615280","UMLS:C3809007","MEDGEN:815337","DOID:0111463"],"synonyms":[{"name":"CFC4","type":"related"},{"name":"MAP2K2 cardiofaciocutaneous syndrome","type":"exact"},{"name":"cardiofaciocutaneous syndrome 4","type":"exact"},{"name":"cardiofaciocutaneous syndrome caused by mutation in MAP2K2","type":"exact"},{"name":"cardiofaciocutaneous syndrome type 4","type":"exact"}],"termid":"MONDO:0014114","terms_by_termid":{"MONDO:0014114":null},"xrefs":{"Monarch":{"xref_id":"0014114"}}}


id: PBO:0088521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5","termid":"PBO:0088521"}


id: GO:0043812
data:
  {"annotated_genes":["SJAG_00880","SJAG_02706"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75607,79954],"is_not":false,"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidyl-1D-myo-inositol-4-phosphate + H2O = phosphatidyl-1D-myo-inositol + phosphate.","definition_xrefs":["RHEA:55652","PMID:10224048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 4-phosphatase activity","termid":"GO:0034596"},{"relation_name":"is_a","term_name":"phosphatidylinositol monophosphate phosphatase activity","termid":"GO:0052744"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_02706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphatidylinositol 4-phosphate phosphatase activity","type":"exact"}],"termid":"GO:0043812","terms_by_termid":{"GO:0043812":null}}


id: PBO:0017451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-output_of","termid":"PBO:0017451"}


id: PBO:0110812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding forkhead transcription factor for ribosomal proteins Fhl1","termid":"PBO:0110812"}


id: PBO:0079726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 2 (pseudogene)","termid":"PBO:0079726"}


id: PBO:0087261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase of the the RAM signaling network; Ndr/LATS family member; binds regulatory subunit Mob2p; involved in regulation of cellular morphogenesis, polarized growth, and septum destruction; phosphorylation by Cbk1p regulates localization and activity of Ace2p transcription factor and Ssd1p translational repressor; Cbk1p activity is regulated by both phosphorylation and specific localization; relocalizes to cytoplasm upon DNA replication stress","termid":"PBO:0087261"}


id: MONDO:0020413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encircling double aortic arch is a very rare congenital anomaly of the great arteries characterized by the presence of two aortic arches (right and left) which encircle and compress the trachea and esophagus, resulting in various respiratory and gastrointestinal symptoms (e.g. harsh breathing, stridor, dyspnea, cyanotic and choking episodes, chronic cough, recurrent respiratory tract infections, dysphagia and reflux). Esophageal atresia and tracheoesophageal fistula have also been reported. It usually occurs isolated, but, on occasion, may be associated with other congenital heart anomalies and chromosomal aberations.","definition_xrefs":["Orphanet:99075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic arch defects","termid":"MONDO:0015236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encircling double aortic arch","secondary_identifiers":["SCTID:764521002","NANDO:2200290","MEDGEN:1641325","GARD:19635","UMLS:C4706940"],"termid":"MONDO:0020413","xrefs":{"Monarch":{"xref_id":"0020413"}}}


id: PBO:0027114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_organization","termid":"PBO:0027114"}


id: MONDO:0043176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn disorder of purine or pyrimidine metabolism","termid":"MONDO:0019254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"phosphoribosylpyrophosphate synthetase deficiency","secondary_identifiers":["MESH:C535995","MESH:C537897","UMLS:C1291401","SCTID:124343001","HGNC:9462","MEDGEN:220944"],"synonyms":[{"name":"PRPP synthetase deficiency","type":"related"},{"name":"deafness hyperuricemia neurologic ataxia","type":"exact"}],"termid":"MONDO:0043176","xrefs":{"Monarch":{"xref_id":"0043176"}}}


id: MONDO:0020555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pleuropulmonary blastoma composed of malignant small cells. Sarcomatous features are absent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleuropulmonary blastoma","termid":"MONDO:0011014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleuropulmonary blastoma type 1","secondary_identifiers":["SCTID:707671008","UMLS:C1710501","ICD9:162.9","Orphanet:99933","GARD:19715","MEDGEN:318288","NCIT:C45626"],"synonyms":[{"name":"type I pleuropulmonary blastoma","type":"exact"}],"termid":"MONDO:0020555","xrefs":{"Monarch":{"xref_id":"0020555"}}}


id: GO:0047811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-alanine + L-glutamine = gamma-L-glutamyl-D-alanine + NH4.","definition_xrefs":["RHEA:23556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-alanine gamma-glutamyltransferase activity","secondary_identifiers":["EC:2.3.2.14","KEGG_REACTION:R01149","MetaCyc:D-ALANINE-GAMMA-GLUTAMYLTRANSFERASE-RXN"],"synonyms":[{"name":"D-alanine g-glutamyltransferase activity","type":"exact"}],"termid":"GO:0047811"}


id: PBO:0062527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily U member 3","termid":"PBO:0062527"}


id: PBO:0003445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gtr1/RagA G protein Gtr1 (predicted)","termid":"PBO:0003445"}


id: PR:O60076
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05026","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.02c","secondary_identifiers":["UniProtKB:O60076"],"synonyms":[{"name":"Spom972h-TAF13","type":"exact"},{"name":"TBP-associated factor 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60076"}


id: MONDO:0025690
data:
  {"annotated_genes":["SJAG_03670"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88385],"is_not":false,"summary":null,"term":"MONDO:0025690"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly, epilepsy, and diabetes syndrome","termid":"MONDO:0100328"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03670":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, epilepsy, and diabetes syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619278","UMLS:C5543294","GARD:18439","MEDGEN:1782107"],"synonyms":[{"name":"MEDS2","type":"exact"}],"termid":"MONDO:0025690","terms_by_termid":{"MONDO:0025690":null},"xrefs":{"Monarch":{"xref_id":"0025690"}}}


id: PBO:0068688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 69, pseudogene","termid":"PBO:0068688"}


id: GO:0019262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylneuraminate metabolic process","termid":"GO:0006054"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"N-acetylneuraminate catabolic process","secondary_identifiers":["MetaCyc:P441-PWY"],"synonyms":[{"name":"N-acetylneuraminate breakdown","type":"exact"},{"name":"N-acetylneuraminate catabolism","type":"exact"},{"name":"N-acetylneuraminate degradation","type":"exact"}],"termid":"GO:0019262"}


id: GO:0060067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the cervix over time, from its formation to the mature structure.","definition_xrefs":["GOC:ebc","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cervix development","synonyms":[{"name":"Mullerian tract development","type":"related"}],"termid":"GO:0060067"}


id: GO:1901852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 7,8-didemethyl-8-hydroxy-5-deazariboflavin.","definition_xrefs":["UniPathway:UPA00072","PMID:14593448","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin metabolic process","termid":"GO:1901850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin biosynthetic process","synonyms":[{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin anabolism","type":"exact"},{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin biosynthesis","type":"exact"},{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin formation","type":"exact"},{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin synthesis","type":"exact"},{"name":"coenzyme F0 anabolism","type":"exact"},{"name":"coenzyme F0 biosynthesis","type":"exact"},{"name":"coenzyme F0 biosynthetic process","type":"exact"},{"name":"coenzyme F0 formation","type":"exact"},{"name":"coenzyme F0 synthesis","type":"exact"}],"termid":"GO:1901852"}


id: FYPO:0000635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize leucine, and therefore requires leucine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for leucine","synonyms":[{"name":"growth auxotrophic for leucine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for leucine during vegetative growth","type":"exact"},{"name":"leucine auxotrophy","type":"exact"}],"termid":"FYPO:0000635"}


id: PBO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase Set8 (predicted)","termid":"PBO:0001326"}


id: MONDO:1012283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tremor syndrome with central axonopathy, non-human animal","termid":"MONDO:1011862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor syndrome with central axonopathy, dog","secondary_identifiers":["OMIA:001017-9615"],"termid":"MONDO:1012283","xrefs":{"Monarch":{"xref_id":"1012283"}}}


id: GO:2000300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle exocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"regulates","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle exocytosis","termid":"GO:2000300"}


id: MONDO:0016436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired dermis elastic tissue disorder with increased elastic tissue (obsolete MONDO:0016436)","secondary_identifiers":["Orphanet:228224"],"termid":"MONDO:0016436","xrefs":{"Monarch":{"xref_id":"0016436"}}}


id: PBO:0028320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028320"}


id: PBO:0034709
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WSS1 like protein","termid":"PBO:0034709"}


id: PBO:0078568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51B, pseudogene","termid":"PBO:0078568"}


id: PBO:0065032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDX6 antisense RNA 1","termid":"PBO:0065032"}


id: FYECO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which xylose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose added","termid":"FYECO:0000402"}


id: MONDO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that involves the integument and its appendages, including hair and nails. Infection may involve the stratum corneum or deeper layers of the epidermis.","direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous mycosis","secondary_identifiers":["DOID:0050134","SCTID:14560005"],"termid":"MONDO:0000254","xrefs":{"Monarch":{"xref_id":"0000254"}}}


id: MONDO:0001170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe or complete loss of motor function on one side of the body. This condition is usually caused by brain diseases that are localized to the cerebral hemisphere opposite to the side of weakness. Less frequently, brain stem lesions; cervical spinal cord diseases; peripheral nervous system diseases; and other conditions may manifest as hemiplegia. The term hemiparesis (see paresis) refers to mild to moderate weakness involving one side of the body.","definition_xrefs":["MESH:D006429"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemiplegia","secondary_identifiers":["ICD9:343.4","icd11.foundation:1641958762","MEDGEN:9196","SCTID:1593000","UMLS:C0018991","DOID:10969","EFO:0009453"],"synonyms":[{"name":"infantile hemiplegia","type":"exact"},{"name":"postnatal infantile hemiplegia","type":"exact"}],"termid":"MONDO:0001170","xrefs":{"Monarch":{"xref_id":"0001170"}}}


id: PBO:0074113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 4 pseudogene 1","termid":"PBO:0074113"}


id: GO:0061916
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of the axonal growth cone which represents the distal part of the structure.","definition_xrefs":["PMID:16098134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth cone leading edge","termid":"GO:0061850"},{"relation_name":"part_of","term_name":"axonal growth cone","termid":"GO:0044295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"leading edge of axonal growth cone","synonyms":[{"name":"axonal growth cone leading edge","type":"exact"},{"name":"distal tip of axonal growth cone","type":"exact"}],"termid":"GO:0061916"}


id: FYPO:0003959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of diacylglycerol O-acyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal diacylglycerol O-acyltransferase activity","termid":"FYPO:0003958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased diacylglycerol O-acyltransferase activity","synonyms":[{"name":"decreased DGAT activity","type":"exact"},{"name":"decreased diacylglycerol acyltransferase activity","type":"broad"},{"name":"reduced diacylglycerol O-acyltransferase activity","type":"exact"}],"termid":"FYPO:0003959"}


id: PBO:0079834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine monophosphate synthetase","termid":"PBO:0079834"}


id: GO:1990957
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located at the ciliary transition zone and consists of the NPHP4 and NPHP1 proteins. It acts as an organiser of the transition zone inner structure, specifically the Y-shaped links, in conjunction with the MKS complex. It is involved in ciliary protein trafficking and is required for correct functioning of the WNT and Hippo signaling pathways.","definition_xrefs":["PMID:25150219","PMID:21498478","PMID:18337471","GOC:cilia","PMID:21555462","PMID:21422230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NPHP complex","synonyms":[{"name":"NPHP module","type":"exact"}],"termid":"GO:1990957"}


id: GO:0047242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a hydroxyanthraquinone + UDP-D-glucose = a glucosyloxyanthraquinone + UDP.","definition_xrefs":["EC:2.4.1.181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"hydroxyanthraquinone glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.181-RXN"],"synonyms":[{"name":"UDP-glucose:hydroxyanthraquinone O-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:hydroxyanthraquinone O-glucosyltransferase activity","type":"related"},{"name":"anthraquinone-specific glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-anthraquinone glucosyltransferase activity","type":"related"}],"termid":"GO:0047242"}


id: GO:0120115
data:
  {"annotated_genes":["SJAG_03460","SJAG_01819","SJAG_03954","SJAG_01327","SJAG_02469","SJAG_05240","SJAG_03070"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97675,108266,110469,114845,116911,117845,118380],"is_not":false,"summary":null,"term":"GO:0120115"}]},"cv_name":"cellular_component","definition":"A heteroheptameric, nuclear protein complex composed of Lsm2, Lsm3, Lsm4, Lsm5, Lsm6, Lsm7, and Lsm8, or orthologs thereof, that selectively binds to snRNAs, in particular U6 or U6atac snRNAs, and also to unspliced transcripts localized within the nucleus.","definition_xrefs":["PMID:28768202","GOC:bhm","GOC:krc","PMID:19121818","PMID:23221597","PMID:27627834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Lsm2-8 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120115","terms_by_termid":{"GO:0120115":null}}


id: GO:0042695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The beginning of development of the breasts in the female.","definition_xrefs":["PMID:19117864","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of secondary female sexual characteristics","termid":"GO:0046543"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thelarche","secondary_identifiers":["Wikipedia:Thelarche"],"termid":"GO:0042695"}


id: GO:0071374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a parathyroid hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to parathyroid hormone","termid":"GO:0071107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to parathyroid hormone stimulus","termid":"GO:0071374"}


id: GO:0110141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which L-glutamate is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:30297026","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transport","termid":"GO:0015813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-glutamate import into mitochondrion","termid":"GO:0110141"}


id: PBO:0085942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mutant sensitive to 6-azauracil (6AU) and mycophenolic acid (MPA)","termid":"PBO:0085942"}


id: PBO:0054818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2231","termid":"PBO:0054818"}


id: PBO:0063938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIMREG pseudogene 3","termid":"PBO:0063938"}


id: PBO:0003163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 1","termid":"PBO:0003163"}


id: MONDO:1011987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photoreceptor dysplasia, non-human animal","secondary_identifiers":["OMIA:001311"],"termid":"MONDO:1011987","xrefs":{"Monarch":{"xref_id":"1011987"}}}


id: PBO:0088664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stm1/Oga1 family protein Smp4","termid":"PBO:0088664"}


id: PBO:0071891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 29","termid":"PBO:0071891"}


id: PR:O14202
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug116 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 116 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.10c","synonyms":[{"name":"Spom972h-mug116","type":"exact"}],"termid":"PR:O14202"}


id: GO:0005662
data:
  {"annotated_genes":["SJAG_03855","SJAG_03722","SJAG_01698"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78973,82079,118230],"is_not":false,"summary":null,"term":"GO:0005662"}]},"cv_name":"cellular_component","definition":"A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa.","definition_xrefs":["PMID:9242902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear replisome","termid":"GO:0043601"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01698":null,"SJAG_03722":null,"SJAG_03855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"DNA replication factor A complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Replication_protein_A"],"synonyms":[{"name":"RPA","type":"exact"},{"name":"replication protein A","type":"exact"}],"termid":"GO:0005662","terms_by_termid":{"GO:0005662":null}}


id: PBO:0012544
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ApsixA hydrolase","termid":"PBO:0012544"}


id: GO:0021566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hypoglossal nerve over time, from its formation to the mature structure. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve development","synonyms":[{"name":"CN XII development","type":"related"},{"name":"cranial nerve 12 development","type":"related"},{"name":"cranial nerve XII development","type":"exact"}],"termid":"GO:0021566"}


id: PR:Q10490
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02145","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.13c","secondary_identifiers":["UniProtKB:Q10490"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10490"}


id: PBO:0005498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron transporter Str2","termid":"PBO:0005498"}


id: PR:O94334
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof13 gene.","definition_xrefs":["UniProtKB:O94334","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.01c","synonyms":[{"name":"Spom972h-pof13","type":"exact"}],"termid":"PR:O94334"}


id: PBO:0072470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA","termid":"PBO:0072470"}


id: PBO:0053808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1067","termid":"PBO:0053808"}


id: GO:0004835
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90055],"is_not":false,"summary":null,"term":"GO:0004835"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate.","definition_xrefs":["EC:6.3.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"tubulin-tyrosine ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:6.3.2.25-RXN","Reactome:R-HSA-8955706","RHEA:17605"],"synonyms":[{"name":"TTL activity","type":"related"},{"name":"alpha-tubulin:L-tyrosine ligase (ADP-forming)","type":"related"},{"name":"tubulinyl-tyrosine ligase activity","type":"exact"}],"termid":"GO:0004835","terms_by_termid":{"GO:0004835":null}}


id: FYPO:0004659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to UV","synonyms":[{"name":"abolished protein phosphorylation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to UV during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to ultraviolet light","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to UV","type":"exact"}],"termid":"FYPO:0004659"}


id: PBO:0080973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8 opposite strand pseudogene 2","termid":"PBO:0080973"}


id: GO:0071732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitric oxide stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitric oxide","termid":"GO:0071731"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"cellular response to reactive nitrogen species","termid":"GO:1902170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitric oxide","termid":"GO:0071732"}


id: GO:0008534
data:
  {"annotated_genes":["SJAG_01119","SJAG_03724","SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75316,98012,76051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme-substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized base lesion DNA N-glycosylase activity","termid":"GO:0000702"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"oxidized purine nucleobase lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-110244","Reactome:R-HSA-110229","Reactome:R-HSA-110243","GO:0003907","EC:3.2.2.23","MetaCyc:3.2.2.23-RXN"],"synonyms":[{"name":"2,6-diamino-4-hydroxy-5(N-methyl)formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"2,6-diamino-4-hydroxy-5N-formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"8-oxoguanine DNA glycosylase activity","type":"broad"},{"name":"DNA glycohydrolase [2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimide releasing]","type":"related"},{"name":"DNA glycosylase/AP-lyase activity","type":"broad"},{"name":"DNA glycosylase/beta-lyase activity","type":"broad"},{"name":"DNA-formamidopyrimidine glycosylase activity","type":"related"},{"name":"Fapy-DNA glycosylase activity","type":"related"},{"name":"Fpg protein","type":"related"},{"name":"bifunctional DNA glycosylase activity","type":"broad"},{"name":"deoxyribonucleate glycosidase activity","type":"related"},{"name":"formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"oxidized purine base lesion DNA N-glycosylase activity","type":"exact"},{"name":"purine-specific oxidized base lesion DNA N-glycosylase activity","type":"related"}],"termid":"GO:0008534","terms_by_termid":{"GO:0034039":null}}


id: PBO:0003714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vezatin family","termid":"PBO:0003714"}


id: PBO:0004134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like conjugating enzyme Atg7","termid":"PBO:0004134"}


id: MONDO:0800341
data:
  {"annotated_genes":["SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87153],"is_not":false,"summary":null,"term":"MONDO:0800341"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cap myopathy","termid":"MONDO:0015753"},{"relation_name":"is_a","term_name":"TPM3-related myopathy","termid":"MONDO:0100108"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 4A, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:255310"],"synonyms":[{"name":"CAPM1","type":"exact"},{"name":"CFTD","type":"exact"},{"name":"CFTDM","type":"exact"},{"name":"NEM1","type":"exact"},{"name":"cap myopathy 1","type":"exact"},{"name":"fiber-type disproportion myopathy, congenital","type":"exact"},{"name":"myopathy, congenital, with fiber-type disproportion","type":"exact"},{"name":"nemaline myopathy 1","type":"exact"}],"termid":"MONDO:0800341","terms_by_termid":{"MONDO:0800341":null},"xrefs":{"Monarch":{"xref_id":"0800341"}}}


id: GO:0035860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a glial cell-derived neurotrophic factor receptor.","definition_xrefs":["PMID:29245123","GOC:yaf","PMID:12953054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"GDNF receptor signaling pathway","type":"exact"},{"name":"glial cell derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"glial cell line-derived neurotrophic factor receptor signalling pathway","type":"exact"},{"name":"glial cell-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0035860"}


id: MONDO:0009916
data:
  {"annotated_genes":["SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88751],"is_not":false,"summary":null,"term":"MONDO:0009916"}]},"cv_name":"mondo","definition":"Decreased activity of the steroidogenic enzyme, 17-beta-hydroxysteroid dehydrogenase, associated with mutation(s) in the HSD17B3 gene, leading to reduced testosterone production.","definition_xrefs":["NCIT:C120203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00630":null},"genotype_count":0,"is_obsolete":false,"name":"46,XY disorder of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:50658006","DOID:0112248","icd11.foundation:887793448","MEDGEN:120626","OMIM:264300","NANDO:2200390","UMLS:C0268296","MESH:C564868","Orphanet:752","MESH:C537805","GARD:5659"],"synonyms":[{"name":"17 Beta HSD3 deficiency","type":"exact"},{"name":"17 alpha KSR deficiency","type":"related"},{"name":"17 alpha ketosteroid reductase deficiency of testis","type":"related"},{"name":"17 beta HSD3 deficiency","type":"exact"},{"name":"17 beta hydroxysteroid dehydrogenase III deficiency","type":"related"},{"name":"17-BETA hydroxysteroid dehydrogenase III deficiency","type":"related"},{"name":"17-Beta hydroxysteroid dehydrogenase 3 deficiency","type":"related"},{"name":"17-KSR deficiency","type":"related"},{"name":"17-beta hydroxysteroid dehydrogenase 3 deficiency","type":"related"},{"name":"17-beta-hydroxysteroid dehydrogenase 3 deficiency","type":"exact"},{"name":"17-ketoreductase deficiency","type":"exact"},{"name":"17-ketosteroid reductase deficiency of testis","type":"related"},{"name":"17-ketosteroidreductase deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency","type":"exact"},{"name":"Male pseudoherma-phroditism with gynecomastia","type":"related"},{"name":"Male pseudohermaphroditism due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency","type":"exact"},{"name":"neutral 17 beta hydroxysteroid oxidoreductase deficiency","type":"related"},{"name":"neutral 17-Beta-hydroxysteroid oxidoreductase deficiency","type":"related"},{"name":"polycystic ovarian disease due to 17-ketosteroid reductase deficiency","type":"related"},{"name":"polycystic ovary syndrome due to 17-ketosteroid reductase deficiency","type":"related"},{"name":"pseudohermaphroditism, Male, with gynecomastia","type":"related"}],"termid":"MONDO:0009916","terms_by_termid":{"MONDO:0009916":null},"xrefs":{"Monarch":{"xref_id":"0009916"}}}


id: PATO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being away from or on the opposite side of the central axis.","definition_xrefs":["medical-dictionary:http://medical-dictionary.thefreedictionary.com/abaxial"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abaxial to","termid":"PATO:0002046"}


id: GO:0052591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: sn-glycerol 3-phosphate + ubiquinone-8 = glycerone phosphate + ubiquinol-8.","definition_xrefs":["MetaCyc:GLYC3PDEHYDROG-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity (obsolete GO:0052591)","termid":"GO:0052591"}


id: PBO:0061018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1","termid":"PBO:0061018"}


id: PBO:0062018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 9 pseudogene","termid":"PBO:0062018"}


id: PBO:0054164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1533","termid":"PBO:0054164"}


id: GO:0015920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lipopolysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A lipopolysaccharide is any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lipopolysaccharide transport","secondary_identifiers":["GO:0015921"],"synonyms":[{"name":"LPS export","type":"narrow"},{"name":"LPS transport","type":"exact"},{"name":"lipopolysaccharide export","type":"narrow"}],"termid":"GO:0015920"}


id: MONDO:0008487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder that manifests as multiple cysts on the ovaries. It results in hormonal imbalances and leads to irregular and abnormal menstrual periods, excess growth of hair, acne eruptions and obesity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic ovary syndrome","secondary_identifiers":["NANDO:2100149","ICD9:256.4","MEDGEN:10836","MESH:D011085","NANDO:2200409","icd11.foundation:1213633323","Orphanet:3185","DOID:11612","SCTID:69878008","OMIM:184700","NCIT:C26862","EFO:0000660","UMLS:C0032460"],"synonyms":[{"name":"PCO1","type":"related"},{"name":"PCOS","type":"exact"},{"name":"PCOS1","type":"narrow"},{"name":"Stein-Leventhal synd.","type":"exact"},{"name":"Stein-Leventhal syndrome","type":"exact"},{"name":"hyperandrogenemia","type":"related"},{"name":"multicystic ovaries","type":"exact"},{"name":"polycystic ovarian disease","type":"exact"},{"name":"polycystic ovaries","type":"exact"},{"name":"polycystic ovary","type":"exact"},{"name":"polycystic ovary syndrome","type":"exact"},{"name":"polycystic ovary syndrome 1","type":"narrow"}],"termid":"MONDO:0008487","xrefs":{"Monarch":{"xref_id":"0008487"}}}


id: GO:0000934
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septum or cross wall which does not entirely span the space between two portions of cell wall and may contain a specialized central pore structure. A porous septum allows the movement of organelles and/or cytoplasm between compartments.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell septum","termid":"GO:0030428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"porous cell septum","synonyms":[{"name":"porous septum","type":"broad"}],"termid":"GO:0000934"}


id: PBO:0042130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 1","termid":"PBO:0042130"}


id: PBO:0074267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC5-SMC6 complex localization factor 2","termid":"PBO:0074267"}


id: PBO:0063762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHC2 antisense RNA 1","termid":"PBO:0063762"}


id: GO:0046045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TMP, ribosylthymine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TMP metabolic process","termid":"GO:0046044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"TMP catabolic process","synonyms":[{"name":"TMP breakdown","type":"exact"},{"name":"TMP catabolism","type":"exact"},{"name":"TMP degradation","type":"exact"}],"termid":"GO:0046045"}


id: PBO:0083223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified ORF MDM31/YHR194W","termid":"PBO:0083223"}


id: PBO:0045032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DISC1 scaffold protein","termid":"PBO:0045032"}


id: MONDO:0010340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Asperger syndrome, susceptibility to","termid":"MONDO:0100440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asperger syndrome, X-linked, susceptibility to, 1","secondary_identifiers":["OMIM:300494"],"synonyms":[{"name":"ASPERGER syndrome, X-linked, susceptibility to, 1","type":"related"},{"name":"ASPGX1","type":"related"},{"name":"Asperger syndrome susceptibility, X-linked 1, Isolated cases, X-linked","type":"exact"},{"name":"Asperger syndrome, X-linked, susceptibility to, 1","type":"exact"},{"name":"Asperger syndrome, X-linked, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to X-linked asperger syndrome 1","type":"related"}],"termid":"MONDO:0010340","xrefs":{"Monarch":{"xref_id":"0010340"}}}


id: GO:0033633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"negative regulation of cell adhesion mediated by integrin","termid":"GO:0033629"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by integrin","termid":"GO:0033632"},{"relation_name":"negatively_regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"negative regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033633"}


id: PR:O42842
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenine phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11776:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.03","secondary_identifiers":["UniProtKB:O42842"],"synonyms":[{"name":"APRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC23A1.03","type":"related"},{"name":"Spom972h-APRT","type":"exact"}],"termid":"PR:O42842"}


id: MONDO:0005380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A none disease characterized by death of bone tissue due to a lack of blood supply.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare rheumatologic disease (obsolete MONDO:0015940)","termid":"MONDO:0015940"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteonecrosis","secondary_identifiers":["SCTID:240196003","DOID:0080008","ICD9:732.3","ICD9:733.41","UMLS:C0029445","icd11.foundation:536467755","NCIT:C35476","DOID:10159","NCIT:C34880","Orphanet:399158","ICD9:733.44","EFO:0004259","ICD9:733.43","ICD10CM:M87","GARD:21657","ICD9:733.42","MEDGEN:45249","ICD9:733.4","ICD9:733.49","MESH:D010020"],"synonyms":[{"name":"aseptic necrosis","type":"exact"},{"name":"bone necrosis","type":"exact"},{"name":"ischaemic bone disease","type":"exact"},{"name":"ischemic bone disease","type":"exact"},{"name":"osteonecrosis","type":"exact"}],"termid":"MONDO:0005380","xrefs":{"Monarch":{"xref_id":"0005380"}}}


id: PBO:0005357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CaCA proton/calcium exchanger (predicted)","termid":"PBO:0005357"}


id: PBO:0060074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 21","termid":"PBO:0060074"}


id: GO:0035893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of platelet aggregation in a second organism.","definition_xrefs":["GOC:fj","GOC:bf","PMID:15922770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"suppression of blood coagulation in another organism","termid":"GO:0035899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression of platelet aggregation in another organism","synonyms":[{"name":"disruption of platelet aggregation in other organism","type":"exact"},{"name":"down-regulation of platelet aggregation in other organism","type":"exact"},{"name":"downregulation of platelet aggregation in other organism","type":"exact"},{"name":"inhibition of platelet aggregation in other organism","type":"exact"},{"name":"negative regulation of platelet aggregation in another organism","type":"related"},{"name":"negative regulation of platelet aggregation in other organism","type":"exact"}],"termid":"GO:0035893"}


id: PBO:0052991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 3","termid":"PBO:0052991"}


id: GO:0072435
data:
  {"annotated_genes":["SJAG_04332","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96401,104292],"is_not":false,"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic G2/M transition DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"},{"relation_name":"is_a","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic G2 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072458"],"synonyms":[{"name":"mitotic G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"mitotic G2/M transition decatenation checkpoint effector process","type":"related"},{"name":"response to mitotic G2/M transition DNA damage checkpoint signaling","type":"exact"},{"name":"response to mitotic G2/M transition decatenation checkpoint signaling","type":"related"},{"name":"response to signal involved in mitotic G2/M transition DNA damage checkpoint","type":"exact"},{"name":"response to signal involved in mitotic G2/M transition decatenation checkpoint","type":"related"}],"termid":"GO:0072435","terms_by_termid":{"GO:0072435":null}}


id: GO:0005194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Mediates the adhesion of the cell to other cells or to the extracellular matrix.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cell adhesion molecule activity (obsolete GO:0005194)","synonyms":[{"name":"cell adhesion molecule activity","type":"exact"}],"termid":"GO:0005194"}


id: GO:1902251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie","PMID:14569084","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell apoptotic process","termid":"GO:0033033"},{"relation_name":"is_a","term_name":"regulation of erythrocyte apoptotic process","termid":"GO:1902250"},{"relation_name":"negatively_regulates","term_name":"erythrocyte apoptotic process","termid":"GO:1902217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte apoptotic process","synonyms":[{"name":"down regulation of RBC apoptosis","type":"narrow"},{"name":"down regulation of RBC apoptotic process","type":"exact"},{"name":"down regulation of erythrocyte apoptosis","type":"narrow"},{"name":"down regulation of erythrocyte apoptotic process","type":"exact"},{"name":"down regulation of red blood cell apoptosis","type":"narrow"},{"name":"down regulation of red blood cell apoptotic process","type":"exact"},{"name":"down-regulation of RBC apoptosis","type":"narrow"},{"name":"down-regulation of RBC apoptotic process","type":"exact"},{"name":"down-regulation of erythrocyte apoptosis","type":"narrow"},{"name":"down-regulation of erythrocyte apoptotic process","type":"exact"},{"name":"down-regulation of red blood cell apoptosis","type":"narrow"},{"name":"down-regulation of red blood cell apoptotic process","type":"exact"},{"name":"downregulation of RBC apoptosis","type":"narrow"},{"name":"downregulation of RBC apoptotic process","type":"exact"},{"name":"downregulation of erythrocyte apoptosis","type":"narrow"},{"name":"downregulation of erythrocyte apoptotic process","type":"exact"},{"name":"downregulation of red blood cell apoptosis","type":"narrow"},{"name":"downregulation of red blood cell apoptotic process","type":"exact"},{"name":"inhibition of RBC apoptosis","type":"narrow"},{"name":"inhibition of RBC apoptotic process","type":"narrow"},{"name":"inhibition of erythrocyte apoptosis","type":"narrow"},{"name":"inhibition of erythrocyte apoptotic process","type":"narrow"},{"name":"inhibition of red blood cell apoptosis","type":"narrow"},{"name":"inhibition of red blood cell apoptotic process","type":"narrow"},{"name":"negative regulation of RBC apoptosis","type":"narrow"},{"name":"negative regulation of RBC apoptotic process","type":"exact"},{"name":"negative regulation of erythrocyte apoptosis","type":"narrow"},{"name":"negative regulation of red blood cell apoptosis","type":"narrow"},{"name":"negative regulation of red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902251"}


id: GO:0045026
data:
  {"annotated_genes":["SJAG_00870","SJAG_02351","SJAG_04887","SJAG_02924","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97155,79561,94194,98238,112146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032220"}]},"cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane that surround a cell with that of another cell, producing a single cell.","definition_xrefs":["GOC:mtg_muscle","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00870":null,"SJAG_02351":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006947"],"synonyms":[{"name":"cell fusion","type":"broad"},{"name":"cell-cell fusion","type":"broad"}],"termid":"GO:0045026","terms_by_termid":{"GO:0032220":null}}


id: PBO:0061936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily M member 1","termid":"PBO:0061936"}


id: GO:0031549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling via the brain-derived neurotrophic factor receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031548"},{"relation_name":"negatively_regulates","term_name":"brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of brain-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"down regulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"downregulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"inhibition of brain-derived neurotrophic factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of BDNF receptor signaling pathway","type":"exact"},{"name":"negative regulation of BDNF receptor signalling pathway","type":"exact"},{"name":"negative regulation of brain-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0031549"}


id: GO:0044552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont causes vasodilation of blood vessels in its host organism, usually causing a reduction in blood pressure. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ecd","GOC:jl","PMID:15637157"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated vasodilation in host (obsolete GO:0044552)","synonyms":[{"name":"modulation of vasodilation in other organism","type":"related"},{"name":"regulation of vasodilation in other organism","type":"related"},{"name":"vasodilation in other organism","type":"exact"}],"termid":"GO:0044552"}


id: GO:2000265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation, extrinsic pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"is_a","term_name":"regulation of blood coagulation, extrinsic pathway","termid":"GO:2000263"},{"relation_name":"positively_regulates","term_name":"blood coagulation, extrinsic pathway","termid":"GO:0007598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"positive regulation of blood coagulation, extrinsic pathway","termid":"GO:2000265"}


id: PBO:0000219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndr kinase/myotonic dystrophy kinase/cot1/warts family","termid":"PBO:0000219"}


id: PATO:0001011
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001011 absolute intensity (obsolete PATO:0001011)","termid":"PATO:0001011"}


id: PBO:0068481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 62, pseudogene","termid":"PBO:0068481"}


id: GO:0008398
data:
  {"annotated_genes":["SJAG_03750"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90292],"is_not":false,"summary":null,"term":"GO:0008398"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 14alpha-methyl steroid + 3 O2 + 3 reduced [NADPH-hemoprotein reductase] = a delta14 steroid + formate + 4 H+ + 4 H2O + 3 oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:54028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"},{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sterol 14-demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.14.13.70-RXN","EC:1.14.14.154"],"synonyms":[{"name":"cytochrome P450 51 activity","type":"narrow"},{"name":"cytochrome P450 CYP51","type":"narrow"},{"name":"lanosterol 14-alpha-demethylase activity","type":"narrow"},{"name":"lanosterol 14-demethylase activity","type":"narrow"},{"name":"lanosterol 14alpha-demethylase activity","type":"related"},{"name":"obtusufoliol 14-demethylase activity","type":"narrow"},{"name":"sterol 14-alpha-demethylase activity","type":"related"},{"name":"sterol 14alpha-demethylase activity","type":"related"}],"termid":"GO:0008398","terms_by_termid":{"GO:0008398":null}}


id: MONDO:0001094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"open-angle glaucoma","termid":"MONDO:0005338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"residual stage of open angle glaucoma","secondary_identifiers":["SCTID:66990007","MEDGEN:509733","ICD9:365.15","UMLS:C0154944","DOID:1066"],"synonyms":[{"name":"open-angle glaucoma residual stage","type":"exact"},{"name":"residual stage of open angle glaucoma","type":"exact"}],"termid":"MONDO:0001094","xrefs":{"Monarch":{"xref_id":"0001094"}}}


id: PBO:0053470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 434","termid":"PBO:0053470"}


id: MONDO:0004789
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010939"}]},"cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the biliary tract.","definition_xrefs":["NCIT:C26718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-neoplastic bile duct disorder","termid":"MONDO:0006322"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"cholangitis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:576.1","UMLS:C0008311","SCTID:82403002","MESH:D002761","DOID:9446","ICD10CM:K83.0","MEDGEN:40258","icd11.foundation:1712178777"],"synonyms":[{"name":"biliary tract infection","type":"exact"},{"name":"biliary tree inflammation","type":"exact"},{"name":"cholangitis","type":"exact"},{"name":"inflammation of biliary tree","type":"exact"}],"termid":"MONDO:0004789","terms_by_termid":{"MONDO:0010939":null},"xrefs":{"Monarch":{"xref_id":"0004789"}}}


id: PBO:0088537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit H","termid":"PBO:0088537"}


id: GO:0018142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a protein.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking (obsolete GO:0018142)","synonyms":[{"name":"DNA-protein covalent cross-linking","type":"exact"}],"termid":"GO:0018142"}


id: PBO:0000777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA endonuclease III","termid":"PBO:0000777"}


id: GO:1990629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex found as a homopentamer of the phospholamban (PLN) protein in the sarcoplasmic reticulum (SR) membrane of cardiomyocytes. Cardiac PLN is a main determinant of muscle contraction and relaxation, by regulating intracellular calcium levels.","definition_xrefs":["GOC:ame","PMID:16043693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005783","GO:0005789","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phospholamban complex","synonyms":[{"name":"cardiac PLB complex","type":"related"},{"name":"cardiac PLN complex","type":"related"},{"name":"cardiac phospholamban complex","type":"exact"}],"termid":"GO:1990629"}


id: GO:0039597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that activates or increases the frequency, rate or extent of host endoribonuclease activity.","definition_xrefs":["PMID:22174690"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host endoribonuclease activity (obsolete GO:0039597)","synonyms":[{"name":"viral induction of host RNAse activity","type":"exact"}],"termid":"GO:0039597"}


id: PBO:0109393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 21B","termid":"PBO:0109393"}


id: GO:0032540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of any behavior associated with finding a host organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of host-seeking behavior","termid":"GO:0032538"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"positively_regulates","term_name":"host-seeking behavior","termid":"GO:0032537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of host-seeking behavior","synonyms":[{"name":"activation of host-seeking behavior","type":"narrow"},{"name":"positive regulation of host-seeking behaviour","type":"exact"},{"name":"stimulation of host-seeking behavior","type":"narrow"},{"name":"up regulation of host-seeking behavior","type":"exact"},{"name":"up-regulation of host-seeking behavior","type":"exact"},{"name":"upregulation of host-seeking behavior","type":"exact"}],"termid":"GO:0032540"}


id: PBO:0040597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG1 pseudogene 1","termid":"PBO:0040597"}


id: PBO:0029495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_cell_cycle_phase","termid":"PBO:0029495"}


id: GO:0000179
data:
  {"annotated_genes":["SJAG_02821","SJAG_03289"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59870],"is_not":false,"summary":null,"term":"GO:0000179"},{"annotations":[70107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"}]},"cv_name":"molecular_function","definition":"Catalysis of the dimethylation of two adjacent adenine residues in a rRNA, using S-adenosyl-L-methionine as a methyl donor.","definition_xrefs":["ISBN:1555811337","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02821":null,"SJAG_03289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0140098","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"rRNA (adenine-N6,N6-)-dimethyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000104":null},"secondary_identifiers":["Reactome:R-HSA-6793066","GO:0043790","Reactome:R-HSA-6790994"],"synonyms":[{"name":"18S rRNA dimethylase activity","type":"exact"},{"name":"S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase activity","type":"exact"},{"name":"dimethyladenosine transferase activity","type":"exact"}],"termid":"GO:0000179","terms_by_termid":{"GO:0000179":null,"GO:0052909":null}}


id: GO:1990875
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the nuclear pore complex (NPC) that faces the nucleoplasm.","definition_xrefs":["PMID:8422679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005643","GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nucleoplasmic side of nuclear pore","synonyms":[{"name":"nucleoplasmic side of NPC","type":"exact"},{"name":"nucleoplasmic side of nuclear pore complex","type":"exact"},{"name":"nucleoplasmic side of nucleopore","type":"exact"}],"termid":"GO:1990875"}


id: GO:0006371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which excision of introns from the primary transcript of messenger RNA (mRNA) is followed by ligation of the two exon termini exposed by removal of each intron, so that mRNA consisting only of the joined exons is produced.","definition_xrefs":["ISBN:0198506732","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA splicing (obsolete GO:0006371)","synonyms":[{"name":"mRNA splicing","type":"exact"}],"termid":"GO:0006371"}


id: GO:0070668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of mast cell proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte proliferation","termid":"GO:0070665"},{"relation_name":"is_a","term_name":"regulation of mast cell proliferation","termid":"GO:0070666"},{"relation_name":"positively_regulates","term_name":"mast cell proliferation","termid":"GO:0070662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell proliferation","synonyms":[{"name":"activation of mast cell proliferation","type":"narrow"},{"name":"stimulation of mast cell proliferation","type":"narrow"},{"name":"up regulation of mast cell proliferation","type":"exact"},{"name":"up-regulation of mast cell proliferation","type":"exact"},{"name":"upregulation of mast cell proliferation","type":"exact"}],"termid":"GO:0070668"}


id: GO:1905880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oogenesis.","definition_xrefs":["GO_REF:0000058","PMID:26434723","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of oogenesis","termid":"GO:1905879"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oogenesis","synonyms":[{"name":"down regulation of oogenesis","type":"exact"},{"name":"down regulation of ovum development","type":"exact"},{"name":"down-regulation of oogenesis","type":"exact"},{"name":"down-regulation of ovum development","type":"exact"},{"name":"downregulation of oogenesis","type":"exact"},{"name":"downregulation of ovum development","type":"exact"},{"name":"inhibition of oogenesis","type":"narrow"},{"name":"inhibition of ovum development","type":"narrow"},{"name":"negative regulation of ovum development","type":"exact"}],"termid":"GO:1905880"}


id: MONDO:0030976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculomotor-abducens synkinesis","secondary_identifiers":["OMIM:619215","UMLS:C5543116","MEDGEN:1789067"],"synonyms":[{"name":"OCABSN","type":"exact"}],"termid":"MONDO:0030976","xrefs":{"Monarch":{"xref_id":"0030976"}}}


id: MONDO:0016793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial oxidative phosphorylation disorder due to a point mutation of mitochondrial DNA (obsolete MONDO:0016793)","secondary_identifiers":["NANDO:2200524","Orphanet:254776"],"synonyms":[{"name":"OXPHOS disease due to a point mutation of mitochondrial DNA","type":"exact"},{"name":"OXPHOS disease due to a point mutation of mtDNA","type":"exact"},{"name":"mitochondrial oxidative phosphorylation disorder due to a point mutation of mtDNA","type":"exact"}],"termid":"MONDO:0016793","xrefs":{"Monarch":{"xref_id":"0016793"}}}


id: PBO:0070331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 3","termid":"PBO:0070331"}


id: PR:O13657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.12c gene.","definition_xrefs":["UniProtKB:O13657","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal ion transporter C27B12.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.12c","synonyms":[{"name":"Spom972h-SPBC27B12.12c","type":"exact"}],"termid":"PR:O13657"}


id: PBO:0066225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 28","termid":"PBO:0066225"}


id: PBO:0063155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 1","termid":"PBO:0063155"}


id: PBO:0055887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit D","termid":"PBO:0055887"}


id: PBO:0071594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 11","termid":"PBO:0071594"}


id: MONDO:0015006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 6, generalized, with scarring and hair loss","secondary_identifiers":["GARD:17951","MEDGEN:934598","Orphanet:508529","OMIM:617294","UMLS:C4310631"],"synonyms":[{"name":"EBSSH","type":"exact"},{"name":"epidermolysis bullosa simplex 6, generalized, with scarring and hair loss","type":"exact"},{"name":"epidermolysis bullosa simplex, generalized, with scarring and hair loss","type":"exact"},{"name":"epidermolysis bullosa simplex, generalized, with scarring and hair loss; EBSSH","type":"exact"},{"name":"generalised basal epidermolysis bullosa simplex with skin atrophy, scarring and hair loss","type":"exact"},{"name":"generalized basal epidermolysis bullosa simplex with skin atrophy, scarring and hair loss","type":"exact"}],"termid":"MONDO:0015006","xrefs":{"Monarch":{"xref_id":"0015006"}}}


id: FYPO:0005830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules is abnormal. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein transport along microtubule during vegetative growth","synonyms":[{"name":"abnormal protein movement along microtubule during vegetative growth","type":"exact"},{"name":"abnormal protein transport along microtubule during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005830"}


id: GO:0061353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to the directed movement of a Malpighian tubule cell toward a stimulus, thereby contributing to the shaping of the tubule.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10","PMID:19783135"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in Malpighian tubule cell chemotaxis (obsolete GO:0061353)","synonyms":[{"name":"bone morphogenic protein receptor signalling pathway involved in Malpighian tubule cell chemotaxis","type":"exact"}],"termid":"GO:0061353"}


id: MONDO:0013122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary congenital glaucoma","termid":"MONDO:0000365"},{"relation_name":"is_a","term_name":"LTBP2-related ocular dysgenesis","termid":"MONDO:0100236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3, primary congenital, D","secondary_identifiers":["MEDGEN:416524","OMIM:613086","GARD:18226","UMLS:C2751316","MESH:C567765"],"synonyms":[{"name":"GLC3D","type":"related"},{"name":"glaucoma 3, primary congenital, D","type":"exact"},{"name":"glaucoma 3, primary congenital, type D","type":"exact"}],"termid":"MONDO:0013122","xrefs":{"Monarch":{"xref_id":"0013122"}}}


id: MONDO:0042495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A arteriosclerosis disorder that involves the retina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriosclerosis disorder","termid":"MONDO:0002277"},{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"arteriosclerotic retinopathy","secondary_identifiers":["MEDGEN:573178","UMLS:C0339478","ICD9:440.8","SCTID:95691008"],"synonyms":[{"name":"arteriosclerosis disorder of retina","type":"exact"},{"name":"arteriosclerosis, retina","type":"related"},{"name":"arteriosclerotic retinopathy","type":"exact"},{"name":"retina arteriosclerosis disorder","type":"exact"},{"name":"retinal arteriosclerosis","type":"related"},{"name":"retinopathy, arteriosclerotic","type":"related"}],"termid":"MONDO:0042495","xrefs":{"Monarch":{"xref_id":"0042495"}}}


id: MONDO:0025028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral disease caused by at least two distinct species (serotypes) in the vesiculovirus genus: vesicular stomatitis indiana virus and vesicular stomatitis new jersey virus. It is characterized by vesicular eruptions on the oral mucosa in cattle, horses, pigs, and other animals. In humans, vesicular stomatitis causes an acute influenza-like illness.","definition_xrefs":["MESH:D054243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabdoviridae infectious disease, non-human animal","termid":"MONDO:0700072"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"mouth mucosa disorder, non-human animal","termid":"MONDO:1011334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicular stomatitis","secondary_identifiers":["SCTID:36921006"],"synonyms":[{"name":"Stomatitides, vesicular","type":"related"},{"name":"stomatitis, vesicular","type":"related"},{"name":"vesicular Stomatitides","type":"related"}],"termid":"MONDO:0025028","xrefs":{"Monarch":{"xref_id":"0025028"}}}


id: GO:0047026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+.","definition_xrefs":["EC:1.1.1.213"],"gene_count":0,"genotype_count":0,"name":"obsolete androsterone dehydrogenase (A-specific) activity (obsolete GO:0047026)","secondary_identifiers":["Wikipedia:3alpha-hydroxysteroid_dehydrogenase_(A-specific)"],"termid":"GO:0047026"}


id: PBO:0076531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 45","termid":"PBO:0076531"}


id: PR:O42899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SCO1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02563","PANTHER:PTHR12151:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sco1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.06","secondary_identifiers":["UniProtKB:O42899"],"synonyms":[{"name":"Spom972h-SCO1","type":"exact"}],"termid":"PR:O42899"}


id: GO:0070047
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 4 (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-4 complex","synonyms":[{"name":"SNARE complex (Stx4, Snap25, Vamp2)","type":"narrow"},{"name":"Stx4-Snap25-Vamp2 complex","type":"narrow"}],"termid":"GO:0070047"}


id: PBO:0029951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_anaphase,_with_unseparated_sister_chromatids_(obsolete_FYPO:0001947)","termid":"PBO:0029951"}


id: MOD:00792
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one (2)H deuterium atom for one (1)H protium atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium substituted residue","termid":"MOD:00786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium monosubstituted residue","synonyms":[{"name":"D(H)1Res","type":"exact"}],"termid":"MOD:00792"}


id: PBO:0116637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase activating protein 3","termid":"PBO:0116637"}


id: PBO:0045389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase like 10","termid":"PBO:0045389"}


id: GO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) -> ADP + phosphate + Na+(out), by a rotational mechanism.","definition_xrefs":["RHEA:58157","PMID:30791207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sodium-transporting ATPase activity, rotational mechanism","secondary_identifiers":["EC:7.2.2.1"],"synonyms":[{"name":"ATP phosphohydrolase (Na+-transporting) activity","type":"related"},{"name":"ATP synthase, sodium ion specific activity","type":"related"},{"name":"Na(+)-translocating ATPase activity","type":"broad"},{"name":"Na(+)-transporting two-sector ATPase activity","type":"related"},{"name":"Na+-translocating ATPase activity","type":"related"},{"name":"Na+-translocating F1Fo-ATPase","type":"narrow"},{"name":"Na+-transporting two-sector ATPase","type":"narrow"},{"name":"sodium transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"sodium-translocating F-type ATPase activity","type":"narrow"},{"name":"sodium-translocating V-type ATPase activity","type":"narrow"},{"name":"sodium-transporting two-sector ATPase activity","type":"narrow"},{"name":"vacuolar-type Na+-ATPase","type":"narrow"},{"name":"vacuolar-type Na+-translocating ATPase","type":"narrow"}],"termid":"GO:0046962"}


id: MONDO:0015091
data:
  {"annotated_genes":["SJAG_00660","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88304,88305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"}]},"cv_name":"mondo","definition":"Any autosomal dominant complex spastic paraplegia in which the cause of the disease is a mutation in the ALDH18A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"},{"relation_name":"is_a","term_name":"P5CS deficiency","termid":"MONDO:0100126"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0004736","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"autosomal dominant spastic paraplegia type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:322007","UMLS:C1832669","Orphanet:100990","icd11.foundation:1867328407"],"synonyms":[{"name":"ALDH18A1 autosomal dominant complex spastic paraplegia","type":"exact"},{"name":"SPG9","type":"exact"},{"name":"autosomal dominant complex spastic paraplegia caused by mutation in ALDH18A1","type":"exact"},{"name":"autosomal dominant spastic paraparesis","type":"related"},{"name":"bilateral cataracts, gastroesophageal reflux, and spastic paraparesis with amyotrophy","type":"related"},{"name":"cataracts, motor neuronopathy, short stature and skeletal abnormalities","type":"related"},{"name":"cataracts-motor neuropathy-short stature-skeletal anomalies syndrome","type":"exact"},{"name":"spastic paraparesis-amyopathy-cataracts-gastroesophageal reflux syndrome","type":"exact"},{"name":"spastic paraplegia 9","type":"related"}],"termid":"MONDO:0015091","terms_by_termid":{"MONDO:0011006":null},"xrefs":{"Monarch":{"xref_id":"0015091"}}}


id: GO:1900135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renin secretion into blood stream.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of renin secretion into blood stream","termid":"GO:1900133"},{"relation_name":"positively_regulates","term_name":"renin secretion into blood stream","termid":"GO:0002001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of renin secretion into blood stream","synonyms":[{"name":"activation of renin release into blood stream","type":"narrow"},{"name":"activation of renin secretion into blood stream","type":"narrow"},{"name":"positive regulation of renin release into blood stream","type":"exact"},{"name":"up regulation of renin release into blood stream","type":"exact"},{"name":"up regulation of renin secretion into blood stream","type":"exact"},{"name":"up-regulation of renin release into blood stream","type":"exact"},{"name":"up-regulation of renin secretion into blood stream","type":"exact"},{"name":"upregulation of renin release into blood stream","type":"exact"},{"name":"upregulation of renin secretion into blood stream","type":"exact"}],"termid":"GO:1900135"}


id: PBO:0041158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 13","termid":"PBO:0041158"}


id: PR:Q9UTK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nicotinate phosphoribosyltransferase PncB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01338","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.06","secondary_identifiers":["UniProtKB:Q9UTK3"],"synonyms":[{"name":"NAPRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pncB","type":"exact"}],"termid":"PR:Q9UTK3"}


id: PBO:0003225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fhn1 plasma membrane organization protein","termid":"PBO:0003225"}


id: PBO:0054890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2304","termid":"PBO:0054890"}


id: PBO:0053708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 911","termid":"PBO:0053708"}


id: PBO:0000781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup124","termid":"PBO:0000781"}


id: PBO:0090741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protoporphyrinogen IX importer","termid":"PBO:0090741"}


id: MONDO:0013794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial thrombocytosis in which the cause of the disease is a mutation in the JAK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential thrombocythemia","termid":"MONDO:0005029"},{"relation_name":"is_a","term_name":"familial thrombocytosis","termid":"MONDO:0019111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocythemia 3","secondary_identifiers":["UMLS:C3281125","MEDGEN:482755","OMIM:614521"],"synonyms":[{"name":"JAK2 familial thrombocytosis","type":"exact"},{"name":"THCYT3","type":"related"},{"name":"familial thrombocytosis caused by mutation in JAK2","type":"exact"},{"name":"thrombocythemia 3","type":"exact"},{"name":"thrombocythemia 3, autosomal dominant, somatic mutation","type":"exact"},{"name":"thrombocythemia type 3","type":"exact"},{"name":"thrombocytosis 3","type":"related"}],"termid":"MONDO:0013794","xrefs":{"Monarch":{"xref_id":"0013794"}}}


id: GO:0070902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in a mitochondrial tRNA molecule.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthesis","termid":"GO:0031119"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0140053","GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mitochondrial tRNA pseudouridine synthesis","termid":"GO:0070902"}


id: PBO:0078159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 37 (pseudogene)","termid":"PBO:0078159"}


id: GO:1904581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intracellular mRNA localization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:21471000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of intracellular mRNA localization","termid":"GO:1904580"},{"relation_name":"negatively_regulates","term_name":"intracellular mRNA localization","termid":"GO:0008298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular mRNA localization","synonyms":[{"name":"down regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"down regulation of intracellular mRNA localisation","type":"exact"},{"name":"down regulation of intracellular mRNA localization","type":"exact"},{"name":"down regulation of intracellular mRNA positioning","type":"narrow"},{"name":"down regulation of mRNA localization, intracellular","type":"exact"},{"name":"down regulation of mRNA positioning, intracellular","type":"narrow"},{"name":"down-regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"down-regulation of intracellular mRNA localisation","type":"exact"},{"name":"down-regulation of intracellular mRNA localization","type":"exact"},{"name":"down-regulation of intracellular mRNA positioning","type":"narrow"},{"name":"down-regulation of mRNA localization, intracellular","type":"exact"},{"name":"down-regulation of mRNA positioning, intracellular","type":"narrow"},{"name":"downregulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"downregulation of intracellular mRNA localisation","type":"exact"},{"name":"downregulation of intracellular mRNA localization","type":"exact"},{"name":"downregulation of intracellular mRNA positioning","type":"narrow"},{"name":"downregulation of mRNA localization, intracellular","type":"exact"},{"name":"downregulation of mRNA positioning, intracellular","type":"narrow"},{"name":"inhibition of establishment and maintenance of intracellular RNA localization","type":"narrow"},{"name":"inhibition of intracellular mRNA localisation","type":"narrow"},{"name":"inhibition of intracellular mRNA localization","type":"narrow"},{"name":"inhibition of intracellular mRNA positioning","type":"narrow"},{"name":"inhibition of mRNA localization, intracellular","type":"narrow"},{"name":"inhibition of mRNA positioning, intracellular","type":"narrow"},{"name":"negative regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"negative regulation of intracellular mRNA localisation","type":"exact"},{"name":"negative regulation of intracellular mRNA positioning","type":"narrow"},{"name":"negative regulation of mRNA localization, intracellular","type":"exact"},{"name":"negative regulation of mRNA positioning, intracellular","type":"narrow"}],"termid":"GO:1904581"}


id: PBO:0044162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 pseudogene 2","termid":"PBO:0044162"}


id: PBO:0034783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex synviolin family ubiquitin-protein ligase E3 subunit, Hrd1","termid":"PBO:0034783"}


id: GO:0045655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of monocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"monocyte differentiation","termid":"GO:0030224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monocyte differentiation","termid":"GO:0045655"}


id: PBO:0065397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 2 pseudogene 3","termid":"PBO:0065397"}


id: PBO:0109376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 8B","termid":"PBO:0109376"}


id: PBO:0090833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25","termid":"PBO:0090833"}


id: PBO:0051300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-37 (non-functional)","termid":"PBO:0051300"}


id: PBO:0079073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-1","termid":"PBO:0079073"}


id: GO:0062174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brexanolone.","definition_xrefs":["PMID:24390875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"brexanolone metabolic process","termid":"GO:0062173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"brexanolone biosynthetic process","synonyms":[{"name":"allopregnanolone anabolism","type":"exact"},{"name":"allopregnanolone biosynthesis","type":"exact"},{"name":"allopregnanolone biosynthetic process","type":"exact"},{"name":"allopregnanolone synthesis","type":"exact"},{"name":"allotetrahydroprogesterone anabolism","type":"exact"},{"name":"allotetrahydroprogesterone biosynthesis","type":"exact"},{"name":"allotetrahydroprogesterone biosynthetic process","type":"exact"},{"name":"allotetrahydroprogesterone synthesis","type":"exact"},{"name":"brexanolone anabolism","type":"exact"},{"name":"brexanolone biosynthesis","type":"exact"},{"name":"brexanolone synthesis","type":"exact"}],"termid":"GO:0062174"}


id: GO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by living organisms to break down ingested proteins into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein digestion","termid":"GO:0044256"}


id: PBO:0059377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 2","termid":"PBO:0059377"}


id: PBO:0043969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta like 2, pseudogene","termid":"PBO:0043969"}


id: PBO:0062938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 3","termid":"PBO:0062938"}


id: GO:0010721
data:
  {"annotated_genes":["SJAG_04140","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[92552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"negatively_regulates","term_name":"cell development","termid":"GO:0048468"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010721","terms_by_termid":{"GO:0051517":null,"GO:0075297":null}}


id: MONDO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral nerve lesion that involves the ulnar nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neuritis of upper limb","termid":"MONDO:0003607"},{"relation_name":"is_a","term_name":"ulnar neuropathy","termid":"MONDO:0007006"},{"relation_name":"is_a","term_name":"peripheral nerve lesion","termid":"MONDO:0024334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"ulnar nerve lesion","secondary_identifiers":["MEDGEN:710723","SCTID:367475009","ICD9:354.2","UMLS:C1288279","DOID:12168"],"synonyms":[{"name":"lesion of ulnar nerve","type":"exact"},{"name":"peripheral nerve lesion of ulnar nerve","type":"exact"},{"name":"ulnar nerve peripheral nerve lesion","type":"exact"}],"termid":"MONDO:0001458","xrefs":{"Monarch":{"xref_id":"0001458"}}}


id: PBO:0041592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5A pseudogene 1","termid":"PBO:0041592"}


id: RO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'causally upstream or within' q iff (1) the end of p is before the end of q and (2) the execution of p exerts some causal influence over the outputs of q; i.e. if p was abolished or the outputs of p were to be modified, this would necessarily affect q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"RO:0002501"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within","synonyms":[{"name":"affects","type":"related"}],"termid":"RO:0002418"}


id: PBO:0054009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1339","termid":"PBO:0054009"}


id: MONDO:0024354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumonia caused by cytomegalovirus. Most humans are exposed to cytomegalovirus. Healthy individuals do not develop signs and symptoms of infection. Patients with weakened immune system (e.g., AIDS patients, cancer patients who are being treated with chemotherapy, and patients who have received bone marrow or solid organ transplants) develop signs and symptoms of infection. They include cough, shortness of breath, fatigue, malaise, fever, muscle and joint pain, and excessive sweating.","definition_xrefs":["NCIT:C35360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytomegalovirus infection","termid":"MONDO:0005132"},{"relation_name":"is_a","term_name":"viral pneumonia","termid":"MONDO:0006012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytomegalovirus pneumonia","secondary_identifiers":["SCTID:7678002","UMLS:C0276253","MEDGEN:124443"],"synonyms":[{"name":"CMV pneumonia","type":"exact"},{"name":"Cytomegaloviral pneumonia","type":"exact"},{"name":"Cytomegalovirus caused pneumonia","type":"exact"},{"name":"Cytomegalovirus pneumonia","type":"exact"},{"name":"cytomegalovirus pneumonia","type":"exact"}],"termid":"MONDO:0024354","xrefs":{"Monarch":{"xref_id":"0024354"}}}


id: MONDO:0043653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lesion caused by type 1 or type 2 herpes simplex virus, typically involving the oralfacial region.","definition_xrefs":["NCIT:C34695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes simplex infectious disease","termid":"MONDO:0004609"},{"relation_name":"is_a","term_name":"lip disorder","termid":"MONDO:0004748"},{"relation_name":"is_a","term_name":"disease arising from reactivation of latent virus","termid":"MONDO:0100330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes labialis","secondary_identifiers":["UMLS:C0019345","MEDGEN:5533","SCTID:1475003","MESH:D006560"],"synonyms":[{"name":"Herpes simplex, labial","type":"related"},{"name":"Sore, cold","type":"related"},{"name":"Sores, cold","type":"related"},{"name":"blister, fever","type":"related"},{"name":"blisters, fever","type":"related"},{"name":"cold sore","type":"exact"},{"name":"cold sores","type":"exact"},{"name":"fever blister","type":"related"},{"name":"fever blisters","type":"related"},{"name":"herpes labialis","type":"exact"},{"name":"herpes simplex labialis","type":"related"},{"name":"labial Herpes simplex","type":"related"}],"termid":"MONDO:0043653","xrefs":{"Monarch":{"xref_id":"0043653"}}}


id: PBO:0074275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLFNL1 antisense RNA 1","termid":"PBO:0074275"}


id: PBO:0000674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, CENP-I ortholog Mis6","termid":"PBO:0000674"}


id: GO:0072351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dicarboxylic acids, any organic acid containing three carboxyl (-COOH) groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tricarboxylic acid biosynthetic process","synonyms":[{"name":"tricarboxylate biosynthesis","type":"exact"},{"name":"tricarboxylate biosynthetic process","type":"exact"},{"name":"tricarboxylic acid anabolism","type":"exact"},{"name":"tricarboxylic acid biosynthesis","type":"exact"},{"name":"tricarboxylic acid formation","type":"exact"},{"name":"tricarboxylic acid synthesis","type":"exact"}],"termid":"GO:0072351"}


id: PBO:0042836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP20DC divergent transcript","termid":"PBO:0042836"}


id: MONDO:0008604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triphalangeal thumb with double phalanges","secondary_identifiers":["MESH:C566028","MEDGEN:395985","UMLS:C1860807","OMIM:190500"],"synonyms":[{"name":"triphalangeal thumb with double phalanges","type":"exact"}],"termid":"MONDO:0008604","xrefs":{"Monarch":{"xref_id":"0008604"}}}


id: GO:0045435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of an epsilon ring at one end of the lycopene molecule (psi, psi-carotene) to form delta-carotene (epsilon, psi-carotene).","definition_xrefs":["PMID:8837512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0009975","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lycopene epsilon cyclase activity","synonyms":[{"name":"lycopene cyclase","type":"broad"}],"termid":"GO:0045435"}


id: PBO:0000577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein (predicted)","termid":"PBO:0000577"}


id: PBO:0064098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired like homeodomain 3","termid":"PBO:0064098"}


id: PBO:0026944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_centromere_clustering_resulting_in_centromere-spindle_pole_body_colocalization","termid":"PBO:0026944"}


id: GO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the cytokine mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"negative regulation of response to cytokine stimulus","termid":"GO:0060761"},{"relation_name":"negatively_regulates","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokine-mediated signaling pathway","synonyms":[{"name":"down regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"down-regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"downregulation of cytokine mediated signaling pathway","type":"exact"},{"name":"inhibition of cytokine mediated signaling pathway","type":"narrow"},{"name":"negative regulation of cytokine and chemokine mediated signaling pathway","type":"exact"},{"name":"negative regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"negative regulation of cytokine mediated signalling pathway","type":"exact"}],"termid":"GO:0001960"}


id: PBO:0056090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme g1","termid":"PBO:0056090"}


id: GO:1990768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The flow of blood through the gastric mucosa of an animal, enabling the transport of nutrients and the removal of waste products.","definition_xrefs":["PMID:10807413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastric mucosal blood circulation","synonyms":[{"name":"stomach mucosal blood circulation","type":"exact"}],"termid":"GO:1990768"}


id: GO:0018248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an enzyme active site via transient sulfation of peptidyl-cysteine to form S-sulfo-L-cysteine.","definition_xrefs":["RESID:AA0171"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via peptidyl cysteine sulfation (obsolete GO:0018248)","synonyms":[{"name":"enzyme active site formation via S-sulpho-L-cysteine","type":"exact"}],"termid":"GO:0018248"}


id: PR:000050494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been phosphorylated at either position 2, 5, or 7 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:28367989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S2,S5,S7)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:CTD","type":"exact"},{"name":"rpb1/Phos(CTD-S2,S5,S7)","type":"exact"}],"termid":"PR:000050494"}


id: PR:Q9P6P5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13048:SF0","PRO:DNx","OMA:SCHPO01135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit bet3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.18c","secondary_identifiers":["UniProtKB:Q9P6P5"],"synonyms":[{"name":"Spom972h-TRAPPC3","type":"exact"},{"name":"TRAPP subunit bet3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P5"}


id: PBO:0044797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 10, pseudogene","termid":"PBO:0044797"}


id: PBO:0042324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 divergent transcript","termid":"PBO:0042324"}


id: PBO:0047552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 10","termid":"PBO:0047552"}


id: PBO:0034450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiosis_I","termid":"PBO:0034450"}


id: MONDO:0024346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pityriasis amiantacea","secondary_identifiers":["icd11.foundation:210953452","MEDGEN:575384","UMLS:C0343100","ICD9:696.5","SCTID:238924007"],"synonyms":[{"name":"pityriasis amiantacea","type":"exact"},{"name":"tinea amiantacea","type":"related"}],"termid":"MONDO:0024346","xrefs":{"Monarch":{"xref_id":"0024346"}}}


id: MONDO:0017829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant proximal renal tubular acidosis (AD pRTA) is a form of proximal renal tubular acidosis (pRTA) characterized by an isolated defect in the proximal tubule leading to the decreased reabsorption of bicarbonate and consequently causing urinary bicarbonate wastage. Mild growth retardation and reduced bone density are extra-renal complications.","definition_xrefs":["Orphanet:314889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"proximal renal tubular acidosis","termid":"MONDO:0008369"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426","MONDO:0005240"],"is_obsolete":false,"name":"autosomal dominant proximal renal tubular acidosis","secondary_identifiers":["UMLS:C5679902","MEDGEN:1842780","GARD:21394"],"synonyms":[{"name":"AD pRTA","type":"exact"},{"name":"proximal renal tubular acidosis, autosomal dominant","type":"exact"}],"termid":"MONDO:0017829","xrefs":{"Monarch":{"xref_id":"0017829"}}}


id: PBO:0066673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras like without CAAX 2","termid":"PBO:0066673"}


id: PBO:0112978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' DNA helicase involved in error-free bypass of DNA lesions; binds flap DNA, stimulates activity of Rad27p and Dna2p; prevents crossovers between ectopic sequences by removing substrates for Mus81-Mms4 or Rad1-Rad10 cleavage; homolog of human FANCM Fanconi anemia protein that is involved in stabilizing and remodeling blocked replication forks; member of SF2 DExD/H superfamily of helicases; nonsense or missense mutations in FANCM predispose  individuals to breast cancer","termid":"PBO:0112978"}


id: MONDO:0014021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial episodic pain syndrome","termid":"MONDO:0018319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"familial episodic pain syndrome with predominantly upper body involvement","secondary_identifiers":["GARD:17618","DOID:0111729","MEDGEN:814997","OMIM:615040","Orphanet:391389","UMLS:C3808667"],"synonyms":[{"name":"FEPS1","type":"related"},{"name":"episodic pain syndrome, familial, 1","type":"related"},{"name":"episodic pain syndrome, familial, type 1","type":"exact"}],"termid":"MONDO:0014021","xrefs":{"Monarch":{"xref_id":"0014021"}}}


id: PBO:0038643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 11","termid":"PBO:0038643"}


id: MONDO:0013459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the SERPINH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 10","secondary_identifiers":["OMIM:613848","MEDGEN:462561","DOID:0110346","GARD:12874","UMLS:C3151211"],"synonyms":[{"name":"OI type 10","type":"related"},{"name":"OI type X","type":"related"},{"name":"OI, type 10","type":"related"},{"name":"OI10","type":"exact"},{"name":"SERPINH1 osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in SERPINH1","type":"exact"},{"name":"osteogenesis imperfecta type X","type":"exact"},{"name":"osteogenesis imperfecta, type 10","type":"related"},{"name":"osteogenesis imperfecta, type X","type":"related"}],"termid":"MONDO:0013459","xrefs":{"Monarch":{"xref_id":"0013459"}}}


id: GO:1904826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hydrogen sulfide biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22034194","GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"hydrogen sulfide biosynthetic process","termid":"GO:0070814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen sulfide biosynthetic process","synonyms":[{"name":"regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"regulation of hydrogen sulfide formation","type":"exact"},{"name":"regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"regulation of hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:1904826"}


id: GO:0035483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the liquid and liquid-suspended solid contents of the stomach exit through the pylorus into the duodenum.","definition_xrefs":["ISBN:9781416032458","GOC:cy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric motility","termid":"GO:0035482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastric emptying","termid":"GO:0035483"}


id: PR:O14131
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug191 gene.","definition_xrefs":["UniProtKB:O14131","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 191 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.05c","synonyms":[{"name":"Spom972h-mug191","type":"exact"}],"termid":"PR:O14131"}


id: PBO:0076676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1 pseudogene 1","termid":"PBO:0076676"}


id: MONDO:1012070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dystrophic epidermolysis bullosa, non-human animal","termid":"MONDO:1011737"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic epidermolysis bullosa, cattle","secondary_identifiers":["OMIA:000341-9913"],"termid":"MONDO:1012070","xrefs":{"Monarch":{"xref_id":"1012070"}}}


id: MONDO:0044872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic disorder, affecting the sympathetic or parasympathetic nervous system. It can be primary, the result of central nervous system degeneration, or secondary due to diabetes or alcoholism. Patients with the chronic form of this disorder usually have a progressive clinical course and a poor prognosis.","definition_xrefs":["NCIT:C53439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia","secondary_identifiers":["MEDGEN:8511","UMLS:C0013363"],"synonyms":[{"name":"dysautonomia","type":"exact"}],"termid":"MONDO:0044872","xrefs":{"Monarch":{"xref_id":"0044872"}}}


id: GO:0003055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the suprachiasmatic nucleus modulates heart rate at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian regulation of heart rate","termid":"GO:0003053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of heart rate by the suprachiasmatic nucleus","synonyms":[{"name":"SCN regulation of heart rate","type":"exact"},{"name":"circadian regulation of heart contraction rate by the suprachiasmatic nucleus","type":"related"},{"name":"master pacemaker clock regulation of heart rate","type":"exact"}],"termid":"GO:0003055"}


id: MONDO:0003531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"eccrine carcinoma","termid":"MONDO:0024240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"papillary eccrine carcinoma","secondary_identifiers":["DOID:5591","MEDGEN:313149","NCIT:C27254","SCTID:254709009","UMLS:C1707880"],"synonyms":[{"name":"digital papillary adenocarcinoma","type":"related"},{"name":"eccrine papillary adenocarcinoma","type":"related"},{"name":"papillary apocrine fibroadenoma","type":"exact"},{"name":"papillary eccrine adenoma","type":"exact"},{"name":"papillary eccrine carcinoma","type":"exact"},{"name":"tubular apocrine adenoma","type":"exact"}],"termid":"MONDO:0003531","xrefs":{"Monarch":{"xref_id":"0003531"}}}


id: PBO:0041207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 1","termid":"PBO:0041207"}


id: GO:0017133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the mitochondrion. It contains flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the mitochondrial electron transport system.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer flavoprotein complex","termid":"GO:0045251"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mitochondrial electron transfer flavoprotein complex","termid":"GO:0017133"}


id: FYPO:0006087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which DNA resection does not occur upstream of a stalled replication fork. DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PomBase:mah","PMID:28475874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished DNA resection during replication fork processing","synonyms":[{"name":"DNA resection during replication fork processing abolished","type":"exact"},{"name":"abolished DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"abolished DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"abolished DNA resectioning during replication fork processing","type":"exact"},{"name":"abolished exonucleolytic DNA cleavage during replication fork processing","type":"exact"}],"termid":"FYPO:0006087"}


id: PBO:0003062
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.8","termid":"PBO:0003062"}


id: PBO:0051731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 4","termid":"PBO:0051731"}


id: GO:1990210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the indole acetic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18056646","GOC:ml"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of indole acetic acid levels in host (obsolete GO:1990210)","synonyms":[{"name":"positive regulation by symbiont of IAA levels in host","type":"exact"},{"name":"positive regulation by symbiont of auxin levels in host","type":"exact"}],"termid":"GO:1990210"}


id: GO:0034814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene-cis-7,8-dihydrodiol + O2 = cis-4-(7-hydroxypyren-8-yl)-2-oxobut-3-enoate.","definition_xrefs":["UM-BBD_reactionID:r1138"],"gene_count":0,"genotype_count":0,"name":"obsolete 7,8-dihydroxy benzo(a)pyrene dioxygenase activity (obsolete GO:0034814)","termid":"GO:0034814"}


id: PBO:0026997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_binding_at_PCB","termid":"PBO:0026997"}


id: PBO:0057448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 568","termid":"PBO:0057448"}


id: PBO:0001031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-mannosyltransferase II complex subunit Pga1 (predicted)","termid":"PBO:0001031"}


id: GO:1903176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of tyrosine 3-monooxygenase activity.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:PARL","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of tyrosine 3-monooxygenase activity (obsolete GO:1903176)","synonyms":[{"name":"regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"regulation of tyrosine hydroxylase activity","type":"exact"}],"termid":"GO:1903176"}


id: PBO:0073807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A12 antisense RNA 1","termid":"PBO:0073807"}


id: PBO:0049676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha","termid":"PBO:0049676"}


id: PBO:0045397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 2 pseudogene 4","termid":"PBO:0045397"}


id: PBO:0088625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartate aminotransferase Maa1","termid":"PBO:0088625"}


id: GO:1900379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of asperthecin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"asperthecin biosynthetic process","termid":"GO:0036184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of asperthecin biosynthetic process","synonyms":[{"name":"regulation of asperthecin biosynthesis","type":"exact"},{"name":"regulation of asperthecin formation","type":"exact"},{"name":"regulation of asperthecin synthesis","type":"exact"}],"termid":"GO:1900379"}


id: GO:0106256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A hydroperoxy icosatetraenoate = an oxoicosatetraenoate + H2O.","definition_xrefs":["RHEA:55556","PMID:12881489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroperoxy icosatetraenoate dehydratase activity","secondary_identifiers":["EC:4.2.1.152"],"termid":"GO:0106256"}


id: MONDO:0007997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microspherophakia with hernia","secondary_identifiers":["UMLS:C1834881","MESH:C537468","MEDGEN:322521","OMIM:157150"],"synonyms":[{"name":"microspherophakia with hernia","type":"exact"}],"termid":"MONDO:0007997","xrefs":{"Monarch":{"xref_id":"0007997"}}}


id: GO:0010540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin from the apex to base of an organ, including the shoot, leaf, primary root, or lateral root.","definition_xrefs":["PMID:10677441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"basipetal auxin transport","termid":"GO:0010540"}


id: PBO:0047762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor 3 pseudogene 1","termid":"PBO:0047762"}


id: MONDO:0013113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any metaphyseal anadysplasia in which the cause of the disease is a mutation in the MMP9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphyseal anadysplasia","termid":"MONDO:0015177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal anadysplasia 2","secondary_identifiers":["OMIM:613073","MESH:C567771","MEDGEN:414350","GARD:15610","UMLS:C2751322"],"synonyms":[{"name":"MANDP2","type":"related"},{"name":"MMP9 metaphyseal anadysplasia","type":"exact"},{"name":"metaphyseal anadysplasia 2","type":"exact"},{"name":"metaphyseal anadysplasia caused by mutation in MMP9","type":"exact"},{"name":"metaphyseal anadysplasia type 2","type":"exact"}],"termid":"MONDO:0013113","xrefs":{"Monarch":{"xref_id":"0013113"}}}


id: MONDO:0008905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predisposition to invasive fungal disease due to CARD9 deficiency","secondary_identifiers":["OMIM:212050","Orphanet:457088","UMLS:C1859353","MEDGEN:347128","NANDO:2200773"],"synonyms":[{"name":"CANDF2","type":"related"},{"name":"CARD9 deficiency","type":"related"},{"name":"CARD9 immunodeficiency","type":"related"},{"name":"candidiasis familial chronic mucocutaneous, autosomal recessive","type":"related"},{"name":"candidiasis, familial chronic mucocutaneous, autosomal recessive","type":"related"},{"name":"candidiasis, familial, 2","type":"related"},{"name":"candidiasis, familial, 2, autosomal recessive","type":"exact"},{"name":"candidiasis, familial, type 2","type":"exact"},{"name":"invasive candidiasis-deep dermatophytosis syndrome","type":"exact"}],"termid":"MONDO:0008905","xrefs":{"Monarch":{"xref_id":"0008905"}}}


id: GO:1990331
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetrameric protein complex capable of acetyltransferase activity. It can catalyze the transfer of an acetyl group from acetyl-CoA to an acceptor residue on histone H-3, histone H-4, or on polyamines. The complex is also capable of acetylating certain small basic proteins. The two Hpa2 dimers that make up the tetramer are held together by interactions between the bound acetyl-CoA molecules.","definition_xrefs":["PMID:10600387","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"},{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Hpa2 acetyltransferase complex","termid":"GO:1990331"}


id: PBO:0064337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLSCR5 antisense RNA 1","termid":"PBO:0064337"}


id: MONDO:0005873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections of the nervous system caused by fungi of the genus aspergillus, most commonly aspergillus fumigatus. Aspergillus infections may occur in immunocompetent hosts, but are more prevalent in individuals with immunologic deficiency syndromes. The organism may spread to the nervous system from focal infections in the lung, mastoid region, sinuses, inner ear, bones, eyes, gastrointestinal tract, and heart. Sinus infections may be locally invasive and enter the intracranial compartment, producing meningitis, fungal; cranial neuropathies; and abscesses in the frontal lobes of the brain. (From Joynt, Clinical Neurology, 1998, Ch 27, pp62-3)","definition_xrefs":["MESH:D020953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspergillosis","termid":"MONDO:0005657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaspergillosis","secondary_identifiers":["MEDGEN:199873","DOID:13565","UMLS:C0752342"],"termid":"MONDO:0005873","xrefs":{"Monarch":{"xref_id":"0005873"}}}


id: PBO:0062508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily H member 3","termid":"PBO:0062508"}


id: SO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the 5' exon preceding the start codon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_region_of_exon","termid":"SO:0001214"},{"relation_name":"part_of","term_name":"five_prime_coding_exon","termid":"SO:0000200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_coding_exon_noncoding_region","synonyms":[{"name":"five prime coding exon noncoding region","type":"exact"},{"name":"five_prime_exon_noncoding_region","type":"exact"}],"termid":"SO:0000486"}


id: GO:0047123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + H2O + quinoline-4-carboxylate = 2-oxo-1,2-dihydroquinoline-4-carboxylate + AH(2).","definition_xrefs":["EC:1.3.99.19","RHEA:14949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"quinoline-4-carboxylate 2-oxidoreductase activity","secondary_identifiers":["MetaCyc:1.3.99.19-RXN","KEGG_REACTION:R05183"],"synonyms":[{"name":"quinoline-4-carboxylate:acceptor 2-oxidoreductase (hydroxylating)","type":"related"},{"name":"quinoline-4-carboxylic acid 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047123"}


id: FYPO:0000422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of endocytosis is decreased. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level in plasma membrane","termid":"FYPO:0003504"},{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased endocytosis during vegetative growth","synonyms":[{"name":"decreased endocytosis during mitotic cell cycle","type":"related"},{"name":"decreased protein internalization during vegetative growth","type":"narrow"},{"name":"endocytosis: decreased during vegetative growth","type":"related"},{"name":"reduced actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"reduced endocytosis during vegetative growth","type":"exact"}],"termid":"FYPO:0000422"}


id: PBO:0073460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A3, pseudogene","termid":"PBO:0073460"}


id: MONDO:0008072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"IgA glomerulonephritis","termid":"MONDO:0005342"},{"relation_name":"is_a","term_name":"IgA nephropathy, susceptibility to","termid":"MONDO:0100555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IgA nephropathy, susceptibility to, 1","secondary_identifiers":["MEDGEN:463619","UMLS:C3160719","OMIM:161950"],"synonyms":[{"name":"IGAN1","type":"exact"},{"name":"IgA nephropathy, susceptibility to, 1","type":"exact"},{"name":"Igan","type":"related"},{"name":"berger disease","type":"related"},{"name":"glomerulonephritis, IgA","type":"related"},{"name":"nephritis, IgA type","type":"related"}],"termid":"MONDO:0008072","xrefs":{"Monarch":{"xref_id":"0008072"}}}


id: PBO:0002619
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.4","termid":"PBO:0002619"}


id: MONDO:0045017
data:
  {"annotated_genes":["SJAG_00717","SJAG_03509","SJAG_03024"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88431,88432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[89030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of cholesterol biosynthetic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"},{"relation_name":"is_a","term_name":"cholesterol metabolism disease","termid":"MONDO:0045008"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03024":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"cholesterol biosynthetic process disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:575241","SCTID:238036004","UMLS:C0342829"],"synonyms":[{"name":"cholesterol synthesis disease","type":"exact"},{"name":"disorder of cholesterol biosynthetic process","type":"exact"},{"name":"disorder of cholesterol synthesis","type":"exact"}],"termid":"MONDO:0045017","terms_by_termid":{"MONDO:0010035":null,"MONDO:0011816":null},"xrefs":{"Monarch":{"xref_id":"0045017"}}}


id: PBO:0074588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 4","termid":"PBO:0074588"}


id: GO:0051087
data:
  {"annotated_genes":["SJAG_04336","SJAG_04187","SJAG_01914","SJAG_03794","SJAG_01737","SJAG_04014","SJAG_03955","SJAG_00564","SJAG_04817","SJAG_01545","SJAG_01160","SJAG_03094","SJAG_00403","SJAG_00066","SJAG_04518","SJAG_04228","SJAG_01684","SJAG_01121","SJAG_02077","SJAG_00436","SJAG_03135","SJAG_03784","SJAG_00574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58688,59493,61556,68207,68388,69646,71654,72020,73442,74777,76372,77972,78339,79472,80803,80945],"is_not":false,"summary":null,"term":"GO:0051087"},{"annotations":[67953,72611,59391,79674,68244,81578,81685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030544"}]},"cv_name":"molecular_function","definition":"Binding to a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.","definition_xrefs":["PMID:10585443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00403":null,"SJAG_00436":null,"SJAG_00564":null,"SJAG_00574":null,"SJAG_01121":null,"SJAG_01160":null,"SJAG_01545":null,"SJAG_01684":null,"SJAG_01737":null,"SJAG_01914":null,"SJAG_02077":null,"SJAG_03094":null,"SJAG_03135":null,"SJAG_03784":null,"SJAG_03794":null,"SJAG_03955":null,"SJAG_04014":null,"SJAG_04187":null,"SJAG_04228":null,"SJAG_04336":null,"SJAG_04518":null,"SJAG_04817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein-folding chaperone binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"chaperone binding","type":"broad"},{"name":"chaperone protein binding","type":"exact"},{"name":"co-chaperone activity","type":"related"},{"name":"co-chaperonin activity","type":"related"}],"termid":"GO:0051087","terms_by_termid":{"GO:0030544":null,"GO:0051087":null}}


id: FYECO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sulfur was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited sulfur","synonyms":[{"name":"limited sulphur added","type":"exact"}],"termid":"FYECO:0000180"}


id: PBO:0070345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 18","termid":"PBO:0070345"}


id: MONDO:1010614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital adrenal hyperplasia due to 11-beta hydroxylase deficiency that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia due to 11-beta hydroxylase deficiency, non-human animal","termid":"MONDO:1010062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital adrenal hyperplasia due to 11-beta hydroxylase deficiency, domestic cat","secondary_identifiers":["OMIA:001661-9685"],"termid":"MONDO:1010614","xrefs":{"Monarch":{"xref_id":"1010614"}}}


id: PBO:0000882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bfr1 binding protein ortholog Sos7","termid":"PBO:0000882"}


id: PBO:0090749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain-like containing protein, implicated in vesicle formation/trafficking","termid":"PBO:0090749"}


id: MONDO:0032651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrosis, neurodegeneration, and cerebral angiomatosis","secondary_identifiers":["MEDGEN:1648312","OMIM:618278","UMLS:C4748939"],"synonyms":[{"name":"FIBROSIS, NEURODEGENERATION, AND CEREBRAL ANGIOMATOSIS","type":"related"},{"name":"FINCA","type":"related"},{"name":"FINCA syndrome","type":"exact"}],"termid":"MONDO:0032651","xrefs":{"Monarch":{"xref_id":"0032651"}}}


id: MONDO:0010645
data:
  {"annotated_genes":["SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89036],"is_not":false,"summary":null,"term":"MONDO:0010645"}]},"cv_name":"mondo","definition":"Oculocerebrorenal syndrome of Lowe (OCRL) is a multisystem disorder characterized by congenital cataracts, glaucoma, intellectual disabilities, postnatal growth retardation and renal tubular dysfunction with chronic renal failure.","definition_xrefs":["Orphanet:534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328","MONDO:0005240"],"is_obsolete":false,"name":"oculocerebrorenal syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10051707","MEDGEN:18145","DOID:1056","MESH:D009800","GARD:3295","NANDO:2100028","NANDO:2200188","NCIT:C84940","icd11.foundation:1392767390","OMIM:309000","SCTID:79385002","ICD9:270.8","UMLS:C0028860"],"synonyms":[{"name":"Lowe disease","type":"exact"},{"name":"Lowe oculo-cerebro-renal syndrome","type":"exact"},{"name":"Lowe oculocerebrorenal syndrome","type":"exact"},{"name":"Lowe syndrome","type":"exact"},{"name":"Lowe syndrome, X-linked recessive","type":"exact"},{"name":"OCR","type":"exact"},{"name":"OCRL","type":"exact"},{"name":"Ocrl1","type":"related"},{"name":"oculo-cerebro-renal dystrophy","type":"exact"},{"name":"oculo-cerebro-renal syndrome","type":"exact"},{"name":"oculocerebrorenal dystrophy","type":"exact"},{"name":"oculocerebrorenal syndrome","type":"exact"},{"name":"oculocerebrorenal syndrome of Lowe","type":"exact"},{"name":"phosphatidylinositol 4,5-biphosphate 5-phosphatase deficiency","type":"exact"},{"name":"phosphatidylinositol 4,5-bisphosphate 5-phosphatase deficiency","type":"related"}],"termid":"MONDO:0010645","terms_by_termid":{"MONDO:0010645":null},"xrefs":{"Monarch":{"xref_id":"0010645"}}}


id: PR:P52808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3001 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P52808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L30-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.03c","synonyms":[{"name":"L32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3001","type":"exact"}],"termid":"PR:P52808"}


id: GO:0022033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of microglial cells through the telencephalon.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon microglial cell migration","termid":"GO:0022033"}


id: SO:0002340
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An abundant small nuclear RNA that, together with associated cellular proteins, regulates the activity of the positive transcription elongation factor b (P-TEFb). It is often described in literature as similar to a snRNA, except of longer length.","definition_xrefs":["PMID:27369380","PMID:19246988","PMID:21853533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_7SK","synonyms":[{"name":"7SK RNA","type":"exact"},{"name":"RNA 7SK","type":"exact"}],"termid":"SO:0002340"}


id: GO:0072179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a nephric duct. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"nephric duct morphogenesis","termid":"GO:0072178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct formation","secondary_identifiers":["Reactome:R-HSA-9830364"],"termid":"GO:0072179"}


id: PBO:0086152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for optimal translation under nutrient stress; perturbs association of Yef3p with ribosomes; involved in TOR signaling; binds G4 quadruplex and purine motif triplex nucleic acid; helps maintain telomere structure; protein abundance increases in response to DNA replication stress; serves as a ribosome preservation factor both during quiescence and recovery","termid":"PBO:0086152"}


id: PBO:0050314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 16","termid":"PBO:0050314"}


id: MONDO:0006369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade II or III pineal parenchymal neoplasm of intermediate-grade malignancy, affecting all ages. It is composed of diffuse sheets or large lobules of uniform cells with mild to moderate nuclear atypia and low to moderate level mitotic activity. (Adapted from WHO)","definition_xrefs":["NCIT:C6967"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pineoblastoma","termid":"MONDO:0016722"},{"relation_name":"is_a","term_name":"pineal parenchymal cell neoplasm","termid":"MONDO:0024890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pineal parenchymal tumor of intermediate differentiation","secondary_identifiers":["DOID:5030","GARD:10644","UMLS:C1367859","EFO:1000474","Orphanet:251919","SCTID:715904005","ONCOTREE:PPTID","MEDGEN:234566"],"synonyms":[{"name":"PPTID","type":"related"},{"name":"pineal parenchymal tumor of intermediate differentiation","type":"exact"},{"name":"pineal parenchymal tumor of intermediate differentiation (morphologic abnormality)","type":"exact"},{"name":"pineal parenchymal tumors of intermediate differentiation","type":"related"},{"name":"pineal parenchymal tumour of intermediate differentiation (morphologic abnormality)","type":"exact"},{"name":"pineal parenchymal tumours of intermediate differentiation","type":"related"}],"termid":"MONDO:0006369","xrefs":{"Monarch":{"xref_id":"0006369"}}}


id: GO:0022880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetylglucosamine(out) = protein histidine + N-acetylglucosamine phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"N-acetylglucosamine transmembrane transporter activity","termid":"GO:0015572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N-acetylglucosamine phosphotransferase system transporter activity","synonyms":[{"name":"N-acetylglucosamine PTS transporter activity","type":"exact"}],"termid":"GO:0022880"}


id: GO:0042124
data:
  {"annotated_genes":["SJAG_01835","SJAG_01290","SJAG_00218","SJAG_04483"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72797,74754,76273,77627],"is_not":false,"summary":null,"term":"GO:0042124"}]},"cv_name":"molecular_function","definition":"Catalysis of the splitting and linkage of (1->3)-beta-D-glucan molecules, resulting in (1->3)-beta-D-glucan chain elongation.","definition_xrefs":["PMID:10809732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucanosyltransferase activity","termid":"GO:0042123"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_04483":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0042124","terms_by_termid":{"GO:0042124":null}}


id: GO:0090081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of canonical Wnt signaling pathway that regulates heart induction. Canonical Wnt signaling pathway involved in heart induction is the series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell, followed by relaying of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heart induction by regulation of canonical Wnt signaling pathway (obsolete GO:0090081)","synonyms":[{"name":"regulation of heart induction by regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of heart induction by regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of heart induction by regulation of canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0090081"}


id: PBO:0003817
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains IDP (GATA)","termid":"PBO:0003817"}


id: GO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a single subunit RNA polymerase enzyme, which is composed of a single catalytic subunit similar to the RNA polymerase enzymes from phages T3, T7, and SP6.","definition_xrefs":["GOC:txnOH","PMID:20701995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase binding","termid":"GO:0070063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"single-subunit type RNA polymerase binding","synonyms":[{"name":"SP6-type RNA polymerase binding","type":"exact"},{"name":"T3-type RNA polymerase binding","type":"exact"},{"name":"T3/T7 type RNA polymerase binding","type":"exact"},{"name":"T7-type RNA polymerase binding","type":"exact"}],"termid":"GO:0001050"}


id: MONDO:0020576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the blood vessel wall characterized by palpable purpura.","definition_xrefs":["NCIT:C112210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous vasculitis","secondary_identifiers":["MEDGEN:488809","UMLS:C0262988"],"synonyms":[{"name":"cutaneous vasculitis","type":"exact"}],"termid":"MONDO:0020576","xrefs":{"Monarch":{"xref_id":"0020576"}}}


id: GO:0009435
data:
  {"annotated_genes":["SJAG_01500","SJAG_04693","SJAG_02618","SJAG_02889","SJAG_03298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76515,79425,115057],"is_not":false,"summary":null,"term":"GO:0009435"},{"annotations":[81869,72547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD+), a coenzyme that interconverts with its reduced form, NADH, in many redox and catabolic reactions. NAD+ is derived from various sources including vitamin B3.","definition_xrefs":["PMID:28648096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"},{"relation_name":"is_a","term_name":"NAD+ metabolic process","termid":"GO:0019674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01500":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"NAD+ biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006736"],"synonyms":[{"name":"NAD (oxidized) biosynthesis","type":"exact"},{"name":"NAD (oxidized) biosynthetic process","type":"exact"},{"name":"NAD (reduced) biosynthesis","type":"exact"},{"name":"NAD (reduced) biosynthetic process","type":"exact"},{"name":"NAD anabolism","type":"exact"},{"name":"NAD biosynthesis","type":"exact"},{"name":"NAD biosynthetic process","type":"exact"},{"name":"NAD formation","type":"exact"},{"name":"NAD synthesis","type":"exact"},{"name":"NADH biosynthesis","type":"exact"},{"name":"NADH biosynthetic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"oxidized NAD biosynthesis","type":"exact"},{"name":"oxidized NAD biosynthetic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"reduced NAD biosynthesis","type":"exact"},{"name":"reduced NAD biosynthetic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthetic process","type":"exact"}],"termid":"GO:0009435","terms_by_termid":{"GO:0009435":null,"GO:0034355":null}}


id: MONDO:0005653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete asbestosis (obsolete MONDO:0005653)","termid":"MONDO:0005653","xrefs":{"Monarch":{"xref_id":"0005653"}}}


id: PBO:0054080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1430","termid":"PBO:0054080"}


id: GO:0023053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a mechanical signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by mechanical effect (obsolete GO:0023053)","synonyms":[{"name":"signal initiation by mechanical effect","type":"exact"}],"termid":"GO:0023053"}


id: GO:0048926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the electrosensory lateral line system over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"electrosensory lateral line system development","termid":"GO:0048926"}


id: PBO:0035824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035824"}


id: FYPO:0006415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindles in adjacent dividing nuclei overlap during meiosis II.","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000120","FYPO:0002399","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"overlapping meiosis II spindles","synonyms":[{"name":"overlapping spindles at meiosis II","type":"exact"},{"name":"overlapping spindles during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006415"}


id: PBO:0110500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STMN3 pseudogene 1","termid":"PBO:0110500"}


id: GO:0071221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipopeptide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterial lipopeptide","termid":"GO:0070339"},{"relation_name":"is_a","term_name":"cellular response to bacterial lipoprotein","termid":"GO:0071220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bacterial lipopeptide","termid":"GO:0071221"}


id: PBO:0005586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid12","termid":"PBO:0005586"}


id: GO:0099184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic intermediate filament cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cytoskeleton","termid":"GO:0005200"},{"relation_name":"is_a","term_name":"structural constituent of postsynapse","termid":"GO:0099186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of postsynaptic intermediate filament cytoskeleton","termid":"GO:0099184"}


id: PBO:0083786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in ribosome biogenesis; putative ATP-dependent RNA helicase of the DEAD-box protein family; human homolog DDX51 complements yeast dbp6 mutant","termid":"PBO:0083786"}


id: PBO:0083164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified ORF RPL36B/YPL249C-A; identified by fungal homology and RT-PCR","termid":"PBO:0083164"}


id: PBO:0060004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 24","termid":"PBO:0060004"}


id: MONDO:0850127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory myofibroblastic tumor","termid":"MONDO:0015798"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid inflammatory myofibroblastic sarcoma","secondary_identifiers":["UMLS:C5880506","MEDGEN:1843877","DOID:0080372"],"termid":"MONDO:0850127","xrefs":{"Monarch":{"xref_id":"0850127"}}}


id: GO:0106004
data:
  {"annotated_genes":["SJAG_04848","SJAG_04680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59366,69029],"is_not":false,"summary":null,"term":"GO:0106004"}]},"cv_name":"biological_process","definition":"The process whereby a guanine in a tRNA is methylated at the N7 position of guanine.","definition_xrefs":["PMID:17382321","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"},{"relation_name":"is_a","term_name":"RNA (guanine-N7)-methylation","termid":"GO:0036265"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04680":null,"SJAG_04848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA (guanine-N7)-methylation","references_by_uniquename":{"GO_REF:0000104":null},"termid":"GO:0106004","terms_by_termid":{"GO:0106004":null}}


id: PBHQ:003
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_has_qualifier_range","direct_ancestors":[{"relation_name":"is_a","term_name":"has_qualifier_range","termid":"PBHQ:001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colocalizes_with","termid":"PBHQ:003"}


id: PBO:0091320
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate KM, ATP KM 1.9 mM","termid":"PBO:0091320"}


id: MONDO:0970961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-saccular limited dorsal myeloschisis, in which the stalk histology is characterized by skin tissue with dermo-epidermal epithelium in continuity with a subcutaneous fibrocollagenous tract containing various ectopic tissues.","definition_xrefs":["Orphanet:645310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-saccular limited dorsal myeloschisis","termid":"MONDO:0968989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"fibroneural non-saccular limited dorsal myeloschisis","secondary_identifiers":["MEDGEN:1853149","UMLS:C5816724"],"termid":"MONDO:0970961","xrefs":{"Monarch":{"xref_id":"0970961"}}}


id: GO:0019872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of streptomycin, a commonly used antibiotic in cell culture media; it acts only on prokaryotes and blocks transition from initiation complex to chain elongating ribosome.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"streptomycin metabolic process","termid":"GO:0046343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"streptomycin biosynthetic process","synonyms":[{"name":"streptomycin anabolism","type":"exact"},{"name":"streptomycin biosynthesis","type":"exact"},{"name":"streptomycin formation","type":"exact"},{"name":"streptomycin synthesis","type":"exact"}],"termid":"GO:0019872"}


id: GO:0000713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the formation of a stable duplex DNA that contains one strand from each of the two recombining DNA molecules.","definition_xrefs":["GOC:elh","PMID:9334324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic heteroduplex formation","termid":"GO:0000713"}


id: PBO:0083431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YGR294W","termid":"PBO:0083431"}


id: PBO:0063604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 19","termid":"PBO:0063604"}


id: MONDO:0012936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 5","secondary_identifiers":["UMLS:C2675514","OMIM:612559","MEDGEN:436452"],"synonyms":[{"name":"Clls5","type":"related"},{"name":"leukemia, chronic lymphocytic susceptibility to, 5","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 5","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 5","type":"exact"}],"termid":"MONDO:0012936","xrefs":{"Monarch":{"xref_id":"0012936"}}}


id: GO:0030899
data:
  {"annotated_genes":["SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119876],"is_not":false,"summary":null,"term":"GO:0030899"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate. This reaction requires the presence of calcium ion (Ca2+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"calcium-dependent ATPase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030899","terms_by_termid":{"GO:0030899":null}}


id: GO:0018496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dihydroxycyclohexane-1-carboxyl-CoA = 2 H+ + 2 e- + 6-oxo-2-hydroxycyclohexane-1-carboxyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dihydroxycyclohexane-1-carboxyl-CoA dehydrogenase activity (obsolete GO:0018496)","termid":"GO:0018496"}


id: GO:0000112
data:
  {"annotated_genes":["SJAG_00995","SJAG_00512","SJAG_03618","SJAG_00901","SJAG_03206"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70060,72100,91708,105051,114044],"is_not":false,"summary":null,"term":"GO:0000112"}]},"cv_name":"cellular_component","definition":"One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, Tfb4p and Tfb5p. Note that Ssl2p is also called Rad25p).","definition_xrefs":["PMID:10915862","PMID:7813015","GOC:ew","PMID:14500720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00512":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_03206":null,"SJAG_03618":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nucleotide-excision repair factor 3 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"NEF3 complex","type":"exact"}],"termid":"GO:0000112","terms_by_termid":{"GO:0000112":null}}


id: PBO:0057699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1287","termid":"PBO:0057699"}


id: PBO:0060071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 18","termid":"PBO:0060071"}


id: MOD:00665
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to a methylated alanine, such as N-methylalanine, N,N-dimethylalanine, or N,N,N-trimethylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated alanine","synonyms":[{"name":"MeAla","type":"exact"}],"termid":"MOD:00665"}


id: FYPO:0007520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing  one or more enzymes that degrades cell wall polysaccharides by hydrolyzing beta-glucan linkages.","definition_xrefs":["PMID:19625445","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on cell wall-degrading enzymes","termid":"FYPO:0001192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on beta-glucanase","synonyms":[{"name":"normal cell population growth in presence of beta-glucanase","type":"exact"},{"name":"normal cell population growth on beta-glucanase","type":"exact"},{"name":"normal cellular response to beta-glucanase","type":"related"},{"name":"normal vegetative cell population growth on beta-glucanase","type":"exact"}],"termid":"FYPO:0007520"}


id: PBO:0052987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte associated immunoglobulin like receptor 2","termid":"PBO:0052987"}


id: MONDO:0019637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal hypoplasia is a developmental anomaly in which one or both kidneys (unilateral or bilateral renal hypoplasia, respectively) have a deficit in the number of nephrons and may be small. Oligomeganephronia represents a severe variant of hypoplasia in which nephron number is reduced by 80% and nephrons are markedly hypertrophied.","definition_xrefs":["Orphanet:93101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypoplasia","secondary_identifiers":["UMLS:C0266295","HP:0000089","NANDO:2200155","GARD:19172","MedDRA:10049102","MEDGEN:120571","SCTID:32659003","DOID:0080204"],"synonyms":[{"name":"renal hypoplasia","type":"exact"},{"name":"renal hypoplasia (disease)","type":"exact"}],"termid":"MONDO:0019637","xrefs":{"Monarch":{"xref_id":"0019637"}}}


id: PBO:0051414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-62 (pseudogene)","termid":"PBO:0051414"}


id: PBO:0061060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 1","termid":"PBO:0061060"}


id: GO:0075242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of zoospore formation, a process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zoospore formation","termid":"GO:0075240"},{"relation_name":"is_a","term_name":"negative regulation of sporangiospore formation","termid":"GO:0075288"},{"relation_name":"negatively_regulates","term_name":"zoospore formation","termid":"GO:0075239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of zoospore formation","termid":"GO:0075242"}


id: MONDO:1011990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dysplasia and persistent primary vitreous, non-human animal","secondary_identifiers":["OMIA:001420"],"termid":"MONDO:1011990","xrefs":{"Monarch":{"xref_id":"1011990"}}}


id: MONDO:0017820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease in which Cushing syndrome is a major feature.","gene_count":0,"genotype_count":0,"name":"obsolete obsolete disease with Cushing syndrome as a major feature (obsolete MONDO:0017820)","secondary_identifiers":["Orphanet:314749"],"synonyms":[{"name":"rare disease with Cushing syndrome as a major feature","type":"exact"}],"termid":"MONDO:0017820","xrefs":{"Monarch":{"xref_id":"0017820"}}}


id: PBO:0039921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 19","termid":"PBO:0039921"}


id: PBO:0004271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps33","termid":"PBO:0004271"}


id: GO:0043618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to stress (obsolete GO:0043618)","termid":"GO:0043618"}


id: FYPO:0006778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the septin ring does not associate with the prospore membrane during prospore membrane formation and closure. Normally, the septin ring forms in close association with the assembling prospore membrane.","definition_xrefs":["PMID:20123972","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore formation","termid":"FYPO:0000196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000121","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"prospore formation with septin ring dissociated from prospore membrane","synonyms":[{"name":"forespore formation with septin ring dissociated from FSM","type":"exact"},{"name":"forespore formation with septin ring dissociated from forespore membrane","type":"exact"},{"name":"prospore septin ring dissociated from prospore membrane","type":"exact"},{"name":"septin ring separated from FSM","type":"exact"}],"termid":"FYPO:0006778"}


id: PBO:0065061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1","termid":"PBO:0065061"}


id: FYPO:0003133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide absent from cell","termid":"FYPO:0001209"},{"relation_name":"is_a","term_name":"decreased cell wall galactomannan level","termid":"FYPO:0002265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"galactomannan absent from cell wall","synonyms":[{"name":"galactomannan absent from cell surface","type":"related"},{"name":"galactomannan absent from cell wall during mitotic cell cycle","type":"related"},{"name":"galactomannan absent from cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0003133"}


id: PBO:0076235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 4","termid":"PBO:0076235"}


id: FYPO:0006849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of RNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased total RNA level during vegetative growth","synonyms":[{"name":"increased total RNA accumulation during vegetative growth","type":"related"},{"name":"increased total RNA content during vegetative growth","type":"exact"},{"name":"increased total RNA level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006849"}


id: PBO:0015668
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae VHT1","termid":"PBO:0015668"}


id: PBO:0045565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 13","termid":"PBO:0045565"}


id: PBO:0066566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHBDF1 pseudogene 1","termid":"PBO:0066566"}


id: PBO:0076631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBL1X/Y related 1","termid":"PBO:0076631"}


id: GO:0018671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + NAD(P)H + H+ + O2 = 3,4-dihydroxybenzoate + NAD(P)+ + H2O.","definition_xrefs":["EC:1.14.13.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.14.13.33-RXN"],"synonyms":[{"name":"4-hydroxybenzoate 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxybenzoate 3-monooxygenase (reduced nicotinamide adenine dinucleotide (phosphate))","type":"exact"},{"name":"4-hydroxybenzoate,NAD(P)H:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"4-hydroxybenzoate-3-hydroxylase activity","type":"related"}],"termid":"GO:0018671"}


id: MONDO:0005511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of janus kinase-3 causing the near absence of T lymphocytes and Natural killer cells; and normal or elevated B lymphocytes due to an autosomal recessive variant of severe combined immunodeficiency.","definition_xrefs":["EFO:0005565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"janus kinase-3 deficiency","secondary_identifiers":["DOID:0060008","Wikipedia:Janus_kinase_3_deficiency"],"termid":"MONDO:0005511","xrefs":{"Monarch":{"xref_id":"0005511"}}}


id: GO:0007031
data:
  {"annotated_genes":["SJAG_03440","SJAG_03781","SJAG_04857","SJAG_02797","SJAG_02997","SJAG_01165","SJAG_00702","SJAG_04146","SJAG_00891","SJAG_02619","SJAG_02788","SJAG_04732","SJAG_03324","SJAG_05950","SJAG_03493","SJAG_02384","SJAG_05315","SJAG_04315","SJAG_01685","SJAG_02034","SJAG_02693","SJAG_04763","SJAG_04428","SJAG_02848","SJAG_03464","SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82151,101845,104668,120175],"is_not":false,"summary":null,"term":"GO:0007031"},{"annotations":[80282,79535,94042,101136],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016559"},{"annotations":[108618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045033"},{"annotations":[98346,104159,71879,73801,75074,72394,81456,113353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[75467,63377,72419],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[119299,100446,65242,117281],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[97290,92253,113354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"},{"annotations":[92262,97291,98830,92254,104996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006625"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_01685":null,"SJAG_02034":null,"SJAG_02384":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02788":null,"SJAG_02797":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04315":null,"SJAG_04428":null,"SJAG_04732":null,"SJAG_04763":null,"SJAG_04857":null,"SJAG_05315":null,"SJAG_05950":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peroxisome organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"peroxisome organisation","type":"exact"},{"name":"peroxisome organization and biogenesis","type":"related"}],"termid":"GO:0007031","terms_by_termid":{"GO:0006625":null,"GO:0007031":null,"GO:0016558":null,"GO:0016559":null,"GO:0016560":null,"GO:0016562":null,"GO:0045033":null,"GO:0045046":null}}


id: PBO:0004712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel2 interacting protein Tti2, predicted ASTRA complex subunit","termid":"PBO:0004712"}


id: MONDO:1010522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontonasal dysplasia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontonasal dysplasia, non-human animal","termid":"MONDO:1010036"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontonasal dysplasia, cattle","secondary_identifiers":["OMIA:002307-9913"],"termid":"MONDO:1010522","xrefs":{"Monarch":{"xref_id":"1010522"}}}


id: MONDO:0013211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that has material basis in mutation in the TNNI3 gene on chromosome 19q13.42.","definition_xrefs":["PMID:19590045","DOID:0110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1FF","secondary_identifiers":["MESH:C567654","UMLS:C2750091","GARD:15643","MEDGEN:412876","OMIM:613286"],"synonyms":[{"name":"CMD1FF","type":"exact"},{"name":"cardiomyopathy, dilated, 1FF","type":"related"},{"name":"cardiomyopathy, dilated, type 1Ff","type":"exact"},{"name":"dilated cardiomyopathy type 1FF","type":"exact"}],"termid":"MONDO:0013211","xrefs":{"Monarch":{"xref_id":"0013211"}}}


id: PR:Q9C0W5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC800.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0W5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial membrane protein C800.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.14c","synonyms":[{"name":"Spom972h-SPBC800.14c","type":"exact"}],"termid":"PR:Q9C0W5"}


id: MONDO:0012407
data:
  {"annotated_genes":["SJAG_01881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87314],"is_not":false,"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","definition":"A very rare neonatal epileptic encephalopathy disorder characterized clinically by onset of severe seizures within hours of birth that are not responsive to anticonvulsants, but are responsive to treatment with pyridoxal phosphate.","definition_xrefs":["Orphanet:79096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of pyridoxine metabolism","termid":"MONDO:0019237"},{"relation_name":"is_a","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005027"],"is_obsolete":false,"name":"pyridoxal phosphate-responsive seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1632334328","MESH:C566449","OMIM:610090","SCTID:724576005","MEDGEN:350498","icd11.foundation:604024463","UMLS:C1864723","GARD:10730","DOID:0111329"],"synonyms":[{"name":"PNPO deficiency","type":"exact"},{"name":"PNPO-related neonatal epileptic encephalopathy","type":"exact"},{"name":"PNPOD","type":"related"},{"name":"Pnpo deficiency","type":"related"},{"name":"epileptic encephalopathy, neonatal, Pnpo-related","type":"related"},{"name":"pyridox(am)ine 5’-phosphate oxidase deficiency","type":"exact"},{"name":"pyridoxal 5'-phosphate-dependent epilepsy","type":"related"},{"name":"pyridoxal phosphate-dependent seizures","type":"exact"},{"name":"pyridoxamine 5'-oxidase deficiency","type":"exact"},{"name":"pyridoxamine 5'-phosphate oxidase deficiency","type":"exact"},{"name":"pyridoxamine 5-prime-phosphate oxidase deficiency","type":"related"},{"name":"pyridoxine 5' phosphate oxidase deficiency","type":"exact"},{"name":"pyridoxine-5'-phosphate oxidase deficiency","type":"related"},{"name":"seizures, pyridoxine-resistant, PLP-sensitive","type":"related"}],"termid":"MONDO:0012407","terms_by_termid":{"MONDO:0012407":null},"xrefs":{"Monarch":{"xref_id":"0012407"}}}


id: MONDO:0018692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"human prion disease","termid":"MONDO:0018926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"variably protease-sensitive prionopathy","secondary_identifiers":["Orphanet:454742","UMLS:C4303527","GARD:21894","icd11.foundation:172957869","MEDGEN:929196","SCTID:721165001"],"termid":"MONDO:0018692","xrefs":{"Monarch":{"xref_id":"0018692"}}}


id: GO:0032910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of transforming growth factor-beta3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"regulates","term_name":"transforming growth factor beta3 production","termid":"GO:0032907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of transforming growth factor beta3 production","synonyms":[{"name":"regulation of TGF-B3 production","type":"exact"},{"name":"regulation of TGFB3 production","type":"exact"},{"name":"regulation of transforming growth factor-beta3 production","type":"exact"}],"termid":"GO:0032910"}


id: PBO:0109835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTT co-chaperone complex subunit Tti2","termid":"PBO:0109835"}


id: PBO:0070869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15","termid":"PBO:0070869"}


id: GO:0097043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 56 of the histone.","definition_xrefs":["GOC:bf","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K56 acetylation (obsolete GO:0097043)","termid":"GO:0097043"}


id: PBO:0070142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 56 pseudogene","termid":"PBO:0070142"}


id: FYPO:0000118
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121215],"is_not":false,"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[121204,121205],"is_not":false,"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle characterized by the presence of more than one septum in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"},{"relation_name":"output_of","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000032","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00118","SJAG_01143"],"name":"multiseptate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_00118","SJAG_01143"],"single_locus_genotype_uniquenames":["mid2delta","mid1delta"],"synonyms":[{"name":"multiseptate during mitotic cell cycle","type":"related"},{"name":"multiseptate during vegetative growth","type":"exact"},{"name":"septation defects, multiple septa during vegetative growth","type":"exact"}],"termid":"FYPO:0000118","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000118":null}}


id: GO:1904203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iodide transport.","definition_xrefs":["GOC:TermGenie","PMID:20392814","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monoatomic anion transport","termid":"GO:1903793"},{"relation_name":"is_a","term_name":"regulation of iodide transport","termid":"GO:1904201"},{"relation_name":"positively_regulates","term_name":"iodide transport","termid":"GO:0015705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of iodide transport","synonyms":[{"name":"activation of iodide transport","type":"narrow"},{"name":"up regulation of iodide transport","type":"exact"},{"name":"up-regulation of iodide transport","type":"exact"},{"name":"upregulation of iodide transport","type":"exact"}],"termid":"GO:1904203"}


id: PBO:0060540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuron navigator 2","termid":"PBO:0060540"}


id: PBO:0085594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern","termid":"PBO:0085594"}


id: MONDO:0009193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial squamous dysplasia, keratinizing desquamative, of urinary tract","secondary_identifiers":["UMLS:C1856902","OMIM:226985","MEDGEN:384010","MESH:C565584"],"synonyms":[{"name":"epithelial squamous dysplasia, keratinizing desquamative, of urinary tract","type":"exact"}],"termid":"MONDO:0009193","xrefs":{"Monarch":{"xref_id":"0009193"}}}


id: GO:0032693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-10 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-10 production","termid":"GO:0032653"},{"relation_name":"negatively_regulates","term_name":"interleukin-10 production","termid":"GO:0032613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-10 production","secondary_identifiers":["GO:0045081","GO:2001180"],"synonyms":[{"name":"down regulation of interleukin-10 production","type":"exact"},{"name":"down-regulation of interleukin-10 production","type":"exact"},{"name":"downregulation of interleukin-10 production","type":"exact"},{"name":"inhibition of interleukin-10 production","type":"narrow"},{"name":"negative regulation of IL-10 production","type":"exact"},{"name":"negative regulation of interleukin-10 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-10 secretion","type":"narrow"}],"termid":"GO:0032693"}


id: PBO:0003390
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.21","termid":"PBO:0003390"}


id: GO:0038055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a member of the BMP family of proteins from a cell.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"BMP secretion","synonyms":[{"name":"BMP protein secretion","type":"exact"},{"name":"bone morphogenetic protein secretion","type":"exact"}],"termid":"GO:0038055"}


id: FYPO:0004832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase A does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase A is the stage of mitosis in which the kinetochore microtubules shorten as chromosomes move toward the spindle poles.","definition_xrefs":["GO:1990023","GO:0000091","GO:1902967","PMID:16824200","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle midzone during anaphase","termid":"FYPO:0004412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone during anaphase A","synonyms":[{"name":"abolished protein localization to spindle midzone during mitotic anaphase A","type":"exact"},{"name":"protein absent from mitotic spindle midzone during anaphase A","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished during anaphase A","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished during anaphase A","type":"exact"},{"name":"protein localization to spindle midzone abolished during anaphase A during vegetative growth","type":"exact"}],"termid":"FYPO:0004832"}


id: FYPO:0003291
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein does not contain galactose residues. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PomBase:mah","PMID:9125114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0003290","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"galactose absent from glycoprotein glycan","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"alpha 1,2-linked galactose residues absent from glycoprotein","type":"exact"},{"name":"galactose absent from glycoprotein oligosaccharide","type":"related"}],"termid":"FYPO:0003291","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: FYPO:0002904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is inviable and shaped in the form of a pear in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pear-shaped cell","termid":"FYPO:0000020"},{"relation_name":"is_a","term_name":"pear-shaped vegetative cell","termid":"FYPO:0001120"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable pear-shaped vegetative cell","synonyms":[{"name":"inviable ice cream cone-shaped cell during vegetative growth","type":"exact"},{"name":"inviable pear-shaped cell during vegetative growth","type":"exact"},{"name":"inviable pear-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; pear-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0002904"}


id: RO:0003003
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between protein a (a transcription factor) and DNA element b if and only if a activates the process of transcription of b.","direct_ancestors":[{"relation_name":"is_a","term_name":"activity_directly_positively_regulates_activity_of","termid":"RO:0002450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increases_expression_of","termid":"RO:0003003"}


id: FYPO:0007046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which alkaline phosphatase activity is absent during a cellular response to zinc ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished alkaline phosphatase activity","termid":"FYPO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished alkaline phosphatase activity during cellular response to zinc ion starvation","synonyms":[{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion depletion","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion deprivation","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion limitation","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc starvation","type":"exact"},{"name":"alkaline phosphatase activity abolished during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0007046"}


id: SO:1000160
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertional duplication where a copy of the segment between the first two breaks listed is inserted at the third break; the orientation of the insertion with respect to its flanking segments is not recorded.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertional_duplication","termid":"SO:1000154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unoriented_insertional_duplication","synonyms":[{"name":"(Drosophila)uDp","type":"related"},{"name":"unoriented insertional duplication","type":"exact"}],"termid":"SO:1000160"}


id: PBO:0045058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 1","termid":"PBO:0045058"}


id: PBO:0068994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 238, pseudogene","termid":"PBO:0068994"}


id: PBO:0052947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte associated protein 3","termid":"PBO:0052947"}


id: GO:0033595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a genistein stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hydroxyisoflavone","termid":"GO:0033594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to genistein","termid":"GO:0033595"}


id: PBO:0067528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 672, pseudogene","termid":"PBO:0067528"}


id: PBO:0062845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclastogenesis associated transmembrane protein 1","termid":"PBO:0062845"}


id: PBO:0049605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 8","termid":"PBO:0049605"}


id: GO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of serotonin following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:16730260","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serotonin production involved in inflammatory response","synonyms":[{"name":"serotonin production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002351"}


id: GO:0002861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"}


