# terms

id: MONDO:0008294
data:
  {"annotated_genes":["SJAG_02896"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87132],"is_not":false,"summary":null,"term":"MONDO:0008294"}]},"cv_name":"mondo","definition":"Acute intermittent porphyria is the most frequent and the most severe form of the acute hepatic porphyrias. It is characterized by the occurrence of neuro-visceral attacks without cutaneous manifestations.","definition_xrefs":["Orphanet:79276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic porphyria","termid":"MONDO:0002520"},{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005066","MONDO:0005093","MONDO:0004335","MONDO:0019142"],"is_obsolete":false,"name":"acute intermittent porphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:56452","GARD:5732","MESH:D017118","NCIT:C84536","NANDO:2201263","SCTID:234422006","icd11.foundation:1565229118","NANDO:1200812","OMIM:176000","UMLS:C0162565","DOID:3890"],"synonyms":[{"name":"AIP","type":"related"},{"name":"AIP - acute intermittent porphyria","type":"exact"},{"name":"HMBS deficiency","type":"related"},{"name":"PBGD deficiency","type":"related"},{"name":"UPS deficiency","type":"related"},{"name":"acute intermittent porphyria","type":"exact"},{"name":"hydroxymethylbilane synthase deficiency","type":"related"},{"name":"porphobilinogen deaminase deficiency","type":"related"},{"name":"porphyria intermittent acute","type":"exact"},{"name":"porphyria, Chester type","type":"related"},{"name":"porphyria, Swedish type","type":"related"},{"name":"porphyria, acute intermittent","type":"related"},{"name":"porphyria, acute intermittent, Nonerythroid variant","type":"related"},{"name":"pyrroloporphyria","type":"exact"},{"name":"uroporphyrinogen synthase deficiency","type":"related"}],"termid":"MONDO:0008294","terms_by_termid":{"MONDO:0008294":null},"xrefs":{"Monarch":{"xref_id":"0008294"}}}


id: PBO:0113116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein involved in endocytosis and autophagy; homologous to Chediak-Higashi syndrome and Beige proteins, both of which are implicated in disease syndromes in human and mouse, respectively, due to defective lysosomal trafficking; mutant phenotype and genetic interactions suggest a role in protein sorting","termid":"PBO:0113116"}


id: PBO:0059038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMP25 antisense RNA 1","termid":"PBO:0059038"}


id: PBO:0086215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to Fpr1p; confers rapamycin resistance by competing with rapamycin for Fpr1p binding; accumulates in the nucleus upon treatment of cells with rapamycin; has similarity to D. melanogaster shuttle craft and human NFX1","termid":"PBO:0086215"}


id: MONDO:0957935
data:
  {"annotated_genes":["SJAG_03972"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88075],"is_not":false,"summary":null,"term":"MONDO:0957935"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620583","UMLS:C5882716","MEDGEN:1849731"],"termid":"MONDO:0957935","terms_by_termid":{"MONDO:0957935":null},"xrefs":{"Monarch":{"xref_id":"0957935"}}}


id: MONDO:0700081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition beginning in the first day of life that results from inadequate surfactant production, causing increased work of breathing and impaired gas exchange.","definition_xrefs":["SCTID:46775006"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute respiratory failure","termid":"MONDO:0001208"},{"relation_name":"is_a","term_name":"primary interstitial lung disease specific to childhood","termid":"MONDO:0017015"},{"relation_name":"is_a","term_name":"pediatric acute respiratory distress syndrome","termid":"MONDO:0100131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"newborn respiratory distress syndrome","secondary_identifiers":["NCIT:C27560","ICD9:769","EFO:1000644","DOID:12716"],"synonyms":[{"name":"HMD - hyaline membrane disease","type":"exact"},{"name":"NRDS","type":"related"},{"name":"RDS","type":"broad"},{"name":"RDS - infants","type":"related"},{"name":"RDS Of newborns","type":"exact"},{"name":"RDS of prematurity","type":"narrow"},{"name":"RDS, respiratory distress syndrome Of newborns","type":"exact"},{"name":"hyaline membrane disease","type":"exact"},{"name":"infant ARDS","type":"exact"},{"name":"infant acute respiratory distress syndrome","type":"exact"},{"name":"infant respiratory distress syndrome","type":"exact"},{"name":"neonatal respiratory distress","type":"exact"},{"name":"neonatal respiratory distress syndrome","type":"exact"},{"name":"newborns (RDS), respiratory distress syndrome Of","type":"exact"},{"name":"pulmonary hyaline membrane disease","type":"exact"},{"name":"pulmonary hypoperfusion syndrome of newborn","type":"exact"},{"name":"respiratory distress syndrome","type":"broad"},{"name":"respiratory distress syndrome Of newborns","type":"exact"},{"name":"respiratory distress syndrome Of newborns (RDS)","type":"exact"},{"name":"respiratory distress syndrome in premature infants","type":"narrow"},{"name":"respiratory distress syndrome in the newborn","type":"exact"},{"name":"respiratory distress syndrome of newborn","type":"exact"},{"name":"respiratory distress syndrome, infant","type":"related"},{"name":"syndrome Of newborns (RDS), respiratory distress","type":"exact"}],"termid":"MONDO:0700081","xrefs":{"Monarch":{"xref_id":"0700081"}}}


id: GO:0080177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plastoglobule. Plastoglobule is a lipoprotein particle present in chloroplasts. They are rich in non-polar lipids (triglycerides, esters) as well as in prenylquinones, plastoquinone and tocopherols. Plastoglobules are often associated with thylakoid membranes, suggesting an exchange of lipids with thylakoids.","definition_xrefs":["PMID:20813909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"chloroplast organization","termid":"GO:0009658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plastoglobule organization","synonyms":[{"name":"plastoglobule organisation","type":"exact"}],"termid":"GO:0080177"}


id: PBO:0089451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gfo/Idh/MocA-like oxidoreductase, N-terminal","termid":"PBO:0089451"}


id: MONDO:0029131
data:
  {"annotated_genes":["SJAG_04472","SJAG_04656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88165,88166],"is_not":false,"summary":null,"term":"MONDO:0029131"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04472":null,"SJAG_04656":null},"genotype_count":0,"is_obsolete":false,"name":"peripheral neuropathy, autosomal recessive, with or without impaired intellectual development","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618124","UMLS:C4748283","MEDGEN:1648480"],"synonyms":[{"name":"PNRIID","type":"related"},{"name":"peripheral neuropathy, autosomal recessive, with or without impaired intellectual development","type":"exact"}],"termid":"MONDO:0029131","terms_by_termid":{"MONDO:0029131":null},"xrefs":{"Monarch":{"xref_id":"0029131"}}}


id: FYPO:0002682
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005152"},{"annotations":[121155,121163,121149,121134,121160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007521"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show increased resistance to a chemical stimulus. Resistance to a chemical is usually measured by determining the maximum concentration of the chemical at which a population of cells grow and divide, and cells are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null},"genotype_count":6,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased resistance to chemical","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_01787","SJAG_00610"],"single_locus_genotype_uniquenames":["pck1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pmk1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","pck2delta"],"synonyms":[{"name":"resistance to chemicals: increased","type":"related"},{"name":"resistant to chemical","type":"exact"}],"termid":"FYPO:0002682","terms_by_termid":{"FYPO:0005152":null,"FYPO:0007521":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: FYPO:0000907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion inheritance is abolished, resulting in the formation of a daughter cell that lacks mitochondria.","definition_xrefs":["PomBase:mah","GO:0000001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance during vegetative growth","termid":"FYPO:0000906"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished mitochondrion inheritance during vegetative growth","synonyms":[{"name":"abolished mitochondrion inheritance during mitotic cell cycle","type":"related"},{"name":"asymmetric mitochondrial inheritance during vegetative growth","type":"related"},{"name":"mitochondrion inheritance abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000907"}


id: MONDO:0035648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic dystrophy","termid":"MONDO:0016107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"juvenile-onset Steinert myotonic dystrophy","secondary_identifiers":["UMLS:C5680306","GARD:22363","ICD10CM:G71.1","Orphanet:589827","MEDGEN:1843227"],"synonyms":[{"name":"Juvenile-onset Steinert disease","type":"exact"},{"name":"Juvenile-onset myotonic dystrophy type 1","type":"exact"}],"termid":"MONDO:0035648","xrefs":{"Monarch":{"xref_id":"0035648"}}}


id: GO:1905747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of saliva secretion.","definition_xrefs":["GO_REF:0000058","PMID:23419067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of saliva secretion","termid":"GO:0046877"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"negatively_regulates","term_name":"saliva secretion","termid":"GO:0046541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of saliva secretion","synonyms":[{"name":"down regulation of saliva secretion","type":"exact"},{"name":"down regulation of salivation","type":"exact"},{"name":"down-regulation of saliva secretion","type":"exact"},{"name":"down-regulation of salivation","type":"exact"},{"name":"downregulation of saliva secretion","type":"exact"},{"name":"downregulation of salivation","type":"exact"},{"name":"inhibition of saliva secretion","type":"narrow"},{"name":"inhibition of salivation","type":"narrow"},{"name":"negative regulation of salivation","type":"exact"}],"termid":"GO:1905747"}


id: PBO:0065146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protamine 2","termid":"PBO:0065146"}


id: PBO:0113517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-binding protein; centrally regulates metabolic homeostasis and carbon utilization during nutrient limitation by managing Snf1p activity; subunit of TORC1 rapamycin-sensitive complex involved in growth control; central scaffold that holds the different components of TORC1 together; contains four HEAT repeats and seven WD-40 repeats","termid":"PBO:0113517"}


id: PBO:0072415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 20","termid":"PBO:0072415"}


id: MONDO:0020780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy and hearing loss","termid":"MONDO:0014980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy and hearing loss 2","secondary_identifiers":["OMIM:618358","MEDGEN:1675017","UMLS:C5193051"],"synonyms":[{"name":"CONE-ROD DYSTROPHY AND HEARING LOSS 2","type":"related"},{"name":"CRDHL2","type":"related"}],"termid":"MONDO:0020780","xrefs":{"Monarch":{"xref_id":"0020780"}}}


id: PBO:0047005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A8","termid":"PBO:0047005"}


id: MONDO:0013839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary sensory and autonomic neuropathy in which the cause of the disease is a mutation in the DST gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy type 6","secondary_identifiers":["UMLS:C3539003","Orphanet:314381","GARD:12987","OMIM:614653","MEDGEN:761278","DOID:0070151"],"synonyms":[{"name":"DST hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"HSAN 6","type":"related"},{"name":"HSAN6","type":"exact"},{"name":"familial dysautonomia with contractures","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy caused by mutation in DST","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type VI","type":"exact"},{"name":"neuropathy, hereditary sensory and autonomic, type 6","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type VI","type":"related"}],"termid":"MONDO:0013839","xrefs":{"Monarch":{"xref_id":"0013839"}}}


id: FYPO:0002163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall thickness during vegetative growth","termid":"FYPO:0006745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002946"],"is_obsolete":false,"name":"decreased cell wall thickness during vegetative growth","synonyms":[{"name":"decreased cell wall thickness during mitotic cell cycle","type":"related"},{"name":"reduced cell wall thickness during vegetative growth","type":"exact"},{"name":"thin cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0002163"}


id: PBO:0027757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_calcium_ion","termid":"PBO:0027757"}


id: MONDO:0009802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteodysplasty, precocious, of Danks, Mayne, and Kozlowski","secondary_identifiers":["OMIM:259270","MESH:C564922","UMLS:C1850185","MEDGEN:337989"],"synonyms":[{"name":"Danks Mayne Kozlowski precocious osteodysplasty","type":"related"},{"name":"osteodysplasty precocious of Danks Mayne and Kozlowski","type":"related"},{"name":"osteodysplasty, precocious, of Danks, Mayne, and Kozlowski","type":"exact"}],"termid":"MONDO:0009802","xrefs":{"Monarch":{"xref_id":"0009802"}}}


id: PBO:0043849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 (Knops blood group)","termid":"PBO:0043849"}


id: GO:0048585
data:
  {"annotated_genes":["SJAG_02481","SJAG_04943","SJAG_04910","SJAG_02392","SJAG_01386","SJAG_01297","SJAG_01528","SJAG_03893","SJAG_00209","SJAG_02233","SJAG_04259","SJAG_03089","SJAG_02451","SJAG_04462","SJAG_00229","SJAG_00991","SJAG_03355","SJAG_03126","SJAG_00526","SJAG_05346","SJAG_00642","SJAG_00289","SJAG_00266","SJAG_03072","SJAG_01464","SJAG_00875","SJAG_02765","SJAG_02169","SJAG_04206","SJAG_01679","SJAG_02858","SJAG_05000","SJAG_04249","SJAG_00975","SJAG_02389","SJAG_01142","SJAG_02336","SJAG_03486","SJAG_03678","SJAG_01114","SJAG_00169","SJAG_03048","SJAG_02013","SJAG_03185","SJAG_04455","SJAG_01983","SJAG_01184","SJAG_02379","SJAG_02514","SJAG_04522","SJAG_03508","SJAG_01253","SJAG_00293","SJAG_04825","SJAG_00424","SJAG_02311","SJAG_03974","SJAG_00883","SJAG_03681","SJAG_02426","SJAG_00573","SJAG_04551","SJAG_02231","SJAG_00457","SJAG_03501","SJAG_03799","SJAG_03353","SJAG_02244","SJAG_06270","SJAG_03263","SJAG_01790","SJAG_00824","SJAG_01245","SJAG_00990","SJAG_03592","SJAG_00610","SJAG_02000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115755,101468,116248,92549,109161,110193,117883,105796,113924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[94592,102327,93926,109906,118364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[118111,102886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[97712,105704,109543,120326,108973,101317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[104262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[79834,79311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[113721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[104039,91259,104744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[90019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[96044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[96894,97834,101319,119070,93502,120327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[109067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[95164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[74079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[73284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[93571,94685,92553,109028,112121,117886,101470,103166,97499,74661,94770,106960,109473,109162,95299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[113674,107819,93072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[74924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[62842,97962,75303,115128,116556,119033,75410,118468,89832,120037,109079,111625,115952,103350,111217,101452,100752,81718,95170,120230,118112,104913,107052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[118257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to a stimulus. 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id: GO:1903587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood vessel endothelial cell proliferation involved in sprouting angiogenesis.","definition_xrefs":["GOC:TermGenie","PMID:23388056","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"regulates","term_name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"}],"termid":"GO:1903587"}


id: MONDO:0021388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the chest wall.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of chest wall","secondary_identifiers":["UMLS:C1290309","ICD9:239.89","MEDGEN:220935","NCIT:C4929","SCTID:126640008"],"synonyms":[{"name":"chest wall neoplasm","type":"exact"},{"name":"chest wall neoplasm (disease)","type":"exact"},{"name":"chest wall tumor","type":"exact"},{"name":"chest wall tumour","type":"exact"},{"name":"neoplasm of chest wall","type":"exact"},{"name":"neoplasm of the chest wall","type":"exact"},{"name":"tumor of chest wall","type":"exact"},{"name":"tumor of the chest wall","type":"exact"},{"name":"tumour of chest wall","type":"exact"},{"name":"tumour of the chest wall","type":"exact"}],"termid":"MONDO:0021388","xrefs":{"Monarch":{"xref_id":"0021388"}}}


id: PBO:0071738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 36","termid":"PBO:0071738"}


id: GO:0009352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Complex that possesses dihydrolipoyl dehydrogenase activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoyl dehydrogenase complex (obsolete GO:0009352)","synonyms":[{"name":"dihydrolipoamide dehydrogenase complex","type":"exact"},{"name":"dihydrolipoyl dehydrogenase complex","type":"exact"}],"termid":"GO:0009352"}


id: GO:0010769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cell morphogenesis contributing to cell differentiation. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell morphogenesis involved in differentiation (obsolete GO:0010769)","termid":"GO:0010769"}


id: GO:1901821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-zeacarotene.","definition_xrefs":["UniPathway:UPA00804","GOC:TermGenie","PMID:6060456","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"alpha-zeacarotene metabolic process","termid":"GO:1901819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"alpha-zeacarotene biosynthetic process","synonyms":[{"name":"alpha-zeacarotene anabolism","type":"exact"},{"name":"alpha-zeacarotene biosynthesis","type":"exact"},{"name":"alpha-zeacarotene formation","type":"exact"},{"name":"alpha-zeacarotene synthesis","type":"exact"}],"termid":"GO:1901821"}


id: PBO:0086299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in transcriptional silencing; required for normal transcription at several loci including HTA2-HTB2 and HHF2-HHT2, but not required at the other histone loci; binds with Spt10p to histone gene promoters during S phase; localizes to nuclear foci that become diffuse upon DNA replication stress","termid":"PBO:0086299"}


id: MONDO:0014452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial dysfibrinogenemia is a coagulation disorder characterized by a bleeding tendency due to a functional anomaly of circulating fibrinogen.","definition_xrefs":["Orphanet:98881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital fibrinogen deficiency","termid":"MONDO:0018060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"familial dysfibrinogenemia","secondary_identifiers":["NCIT:C131659","ICD9:286.3","OMIM:616004","SCTID:111589005","UMLS:C0272350","GARD:2004","MEDGEN:82901"],"synonyms":[{"name":"congenital dysfibrinogenemia","type":"related"},{"name":"dysfibrinogenemia","type":"exact"},{"name":"dysfibrinogenemia, congenital","type":"related"},{"name":"dysfibrinogenemia, familial","type":"related"},{"name":"familial dysfibrinogenemia","type":"exact"},{"name":"hypodysfibrinogenemia","type":"exact"},{"name":"hypodysfibrinogenemia, congenital","type":"related"}],"termid":"MONDO:0014452","xrefs":{"Monarch":{"xref_id":"0014452"}}}


id: PBO:0071016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 18","termid":"PBO:0071016"}


id: MONDO:0002339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemangioma (obsolete MONDO:0002339)","termid":"MONDO:0002339","xrefs":{"Monarch":{"xref_id":"0002339"}}}


id: GO:0140193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of an adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process (obsolete GO:0140193)","termid":"GO:0140193"}


id: MONDO:0012932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 16, autosomal dominant","secondary_identifiers":["MESH:C567259","UMLS:C2675523","OMIM:612554","MEDGEN:390819"],"synonyms":[{"name":"MYP16","type":"exact"},{"name":"myopia 16","type":"exact"},{"name":"myopia 16, autosomal dominant","type":"exact"}],"termid":"MONDO:0012932","xrefs":{"Monarch":{"xref_id":"0012932"}}}


id: PBO:0116631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 4 pseudogene 4","termid":"PBO:0116631"}


id: PBO:0082263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminolevulinate dehydratase; a homo-octameric enzyme, catalyzes the conversion of 5-aminolevulinate to porphobilinogen, the second step in heme biosynthesis; enzymatic activity is zinc-dependent; localizes to the cytoplasm and nucleus; human homolog ALAD can complement yeast hem2 mutant","termid":"PBO:0082263"}


id: FYPO:0008139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum lumen is larger than normal.","definition_xrefs":["PMID:11839792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum morphology","termid":"FYPO:0000354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"dilated endoplasmic reticulum lumen","synonyms":[{"name":"dialted ER lumen","type":"exact"}],"termid":"FYPO:0008139"}


id: PBO:0045765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA delta isomerase 1","termid":"PBO:0045765"}


id: PBO:0003946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase Pyr1","termid":"PBO:0003946"}


id: PBO:0030879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_component_assembly_during_vegetative_growth","termid":"PBO:0030879"}


id: PBO:0090657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 6 Pre5","termid":"PBO:0090657"}


id: PBO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATPase inhibitor (predicted)","termid":"PBO:0005837"}


id: GO:1905666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to endosome.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:PARL","GOC:TermGenie","PMID:22732145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to endosome","termid":"GO:0036010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to endosome","synonyms":[{"name":"regulation of protein localisation in endosome","type":"exact"},{"name":"regulation of protein localization in endosome","type":"exact"}],"termid":"GO:1905666"}


id: PR:Q9UU96
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polynucleotide 5'-hydroxyl-kinase grc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.03","synonyms":[{"name":"Spom972h-grc3","type":"exact"}],"termid":"PR:Q9UU96"}


id: GO:0002810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antifungal peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antifungal peptide production","termid":"GO:0002788"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"},{"relation_name":"regulates","term_name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of antifungal peptide biosynthetic process","termid":"GO:0002810"}


id: CHEBI:171741
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerulenin","termid":"CHEBI:171741"}


id: PBO:0009256
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ARPC3","termid":"PBO:0009256"}


id: FYPO:0006003
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of cellular component organization at the cellular level is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0016043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization phenotype","termid":"FYPO:0000334"},{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular component organization","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"synonyms":[{"name":"normal cellular component organisation","type":"exact"},{"name":"normal cellular component organization at cellular level","type":"exact"}],"termid":"FYPO:0006003","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: PR:O94238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11127:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.13","secondary_identifiers":["UniProtKB:O94238"],"synonyms":[{"name":"SPAC1805.13","type":"related"},{"name":"Spom972h-RPL14","type":"exact"}],"termid":"PR:O94238"}


id: PBO:0053386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 313","termid":"PBO:0053386"}


id: GO:0046566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the 4,5-ring opening reaction: 3,4-dihydroxyphenylalanine + O2 = 4,5-seco-DOPA. 4,5-seco-DOPA spontaneously recyclizes to form betalamic acid.","definition_xrefs":["PMID:11711071"],"gene_count":0,"genotype_count":0,"name":"obsolete DOPA dioxygenase activity (obsolete GO:0046566)","synonyms":[{"name":"dihydroxyphenylalanine dioxygenase activity","type":"exact"}],"termid":"GO:0046566"}


id: PBO:0069419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 681, pseudogene","termid":"PBO:0069419"}


id: MONDO:0009065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cystinosis, nephropathic (obsolete MONDO:0009065)","termid":"MONDO:0009065","xrefs":{"Monarch":{"xref_id":"0009065"}}}


id: PBO:0003114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1772 family protein","termid":"PBO:0003114"}


id: MONDO:0006145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow-growing malignant bone tumor arising from the remnants of the notochord and occurring in the base of the skull. The tumor is characterized by a lobulated growth pattern, myxoid stroma formation, and the presence of physaliphorous cells and cartilage.","definition_xrefs":["NCIT:C6902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chordoma","termid":"MONDO:0008978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroid chordoma","secondary_identifiers":["DOID:4152","MEDGEN:224768","UMLS:C1266173","EFO:1000174","ICDO:9371/3"],"synonyms":[{"name":"chondroid chordoma","type":"exact"},{"name":"chondroid chordoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006145","xrefs":{"Monarch":{"xref_id":"0006145"}}}


id: GO:0004993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine serotonin and transmitting the signal across the membrane by activating an associated G-protein. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled serotonin receptor activity","secondary_identifiers":["GO:0001585","GO:0016609","Wikipedia:5-HT_receptor"],"synonyms":[{"name":"5-HT receptor","type":"exact"},{"name":"5-hydroxytryptamine receptor","type":"exact"},{"name":"G protein coupled serotonin receptor activity","type":"exact"},{"name":"G-protein coupled serotonin receptor activity","type":"exact"}],"termid":"GO:0004993"}


id: MONDO:0016986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital smooth muscle hamartoma (CSMH) is a rare cutaneous hamartomatous lesion most often located on the lumbosacral area or proximal limbs (but rarely on atypical areas such as scalp, eyelid or foot) and characterized by a disorganized proliferation of smooth muscle fibers of arrector pili presenting usually as a localized skin-colored or hyperpigmented plaque (up to 10 cm in diameter) with prominent vellus hairs (most common classic form) or less commonly by multiple skin-colored papules that can coalesce to form irregularly shaped plaques. With time, hyperpigmentation and vellus hairs usually diminish and neither malignant transformation nor associated systemic involvement has been reported.","definition_xrefs":["Orphanet:263435"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital smooth muscle hamartoma","secondary_identifiers":["MEDGEN:590701","SCTID:239144007","UMLS:C0406819","ICD9:759.6","GARD:20902"],"termid":"MONDO:0016986","xrefs":{"Monarch":{"xref_id":"0016986"}}}


id: GO:0021989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the olfactory cortex over time from its initial formation until its mature state. The olfactory cortex is involved in the perception of smell. It receives input from the olfactory bulb and is responsible for the identification of odors.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"olfactory lobe development","termid":"GO:0021988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory cortex development","termid":"GO:0021989"}


id: GO:0098849
data:
  {"annotated_genes":["SJAG_01344","SJAG_02599","SJAG_03497","SJAG_04516","SJAG_00988","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72590,95148,98885,98923,110370,120203],"is_not":false,"summary":null,"term":"GO:0098849"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of cadmium cations in a cell. These include transport of cadmium cations away from sensitive areas and to compartments or complexes whose purpose is sequestration.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of cadmium ion","termid":"GO:0071585"},{"relation_name":"is_a","term_name":"cellular detoxification of metal ion","termid":"GO:0140961"},{"relation_name":"part_of","term_name":"cellular response to cadmium ion","termid":"GO:0071276"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of cadmium ion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098849","terms_by_termid":{"GO:0098849":null}}


id: MONDO:1010045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diprosopus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diprosopus, non-human animal","secondary_identifiers":["OMIA:000290"],"termid":"MONDO:1010045","xrefs":{"Monarch":{"xref_id":"1010045"}}}


id: PBO:0045237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 5","termid":"PBO:0045237"}


id: MONDO:0022612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brunsting-Perry syndrome","secondary_identifiers":["MEDGEN:725587","UMLS:C1304226"],"synonyms":[{"name":"Brunsting Perry syndrome","type":"related"},{"name":"cicatricial pemphigoid of the Brunsting-Perry type","type":"related"},{"name":"localised cicatricial pemphigoid","type":"related"},{"name":"localized cicatricial pemphigoid","type":"related"}],"termid":"MONDO:0022612","xrefs":{"Monarch":{"xref_id":"0022612"}}}


id: GO:1902077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lateral motor column neuron migration.","definition_xrefs":["PMID:20711475","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lateral motor column neuron migration","termid":"GO:1902076"},{"relation_name":"is_a","term_name":"negative regulation of motor neuron migration","termid":"GO:1905484"},{"relation_name":"negatively_regulates","term_name":"lateral motor column neuron migration","termid":"GO:0097477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lateral motor column neuron migration","synonyms":[{"name":"down regulation of lateral motor column neuron migration","type":"exact"},{"name":"down-regulation of lateral motor column neuron migration","type":"exact"},{"name":"downregulation of lateral motor column neuron migration","type":"exact"},{"name":"inhibition of lateral motor column neuron migration","type":"narrow"}],"termid":"GO:1902077"}


id: PBO:0052293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 1 pseudogene 1","termid":"PBO:0052293"}


id: PBO:0042560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 2","termid":"PBO:0042560"}


id: PBO:0076699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCERG1 pseudogene 1","termid":"PBO:0076699"}


id: FYPO:0001802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated cell during cellular response to caffeine (obsolete FYPO:0001802)","synonyms":[{"name":"elongated cell during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"elongated cell during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"elongated in response to caffeine","type":"exact"}],"termid":"FYPO:0001802"}


id: GO:0140104
data:
  {"annotated_genes":["SJAG_01122","SJAG_01083","SJAG_03867","SJAG_03662","SJAG_03633","SJAG_04180","SJAG_01240","SJAG_02895","SJAG_02661","SJAG_00913","SJAG_03905","SJAG_02439","SJAG_00687","SJAG_01940","SJAG_00925","SJAG_03322","SJAG_00532","SJAG_04561","SJAG_04038","SJAG_03470","SJAG_01358","SJAG_00586","SJAG_01909","SJAG_01140","SJAG_00914","SJAG_02437","SJAG_04366","SJAG_01178","SJAG_02425","SJAG_02065","SJAG_04272","SJAG_00569","SJAG_01127","SJAG_01238","SJAG_02998","SJAG_02416","SJAG_01789","SJAG_02866","SJAG_03128","SJAG_04758","SJAG_01534","SJAG_01005","SJAG_03798","SJAG_03862","SJAG_02035","SJAG_00968","SJAG_02361","SJAG_04257","SJAG_00942","SJAG_02698","SJAG_02198","SJAG_02906","SJAG_05300","SJAG_03959","SJAG_01405","SJAG_01496","SJAG_03366","SJAG_04411","SJAG_02348","SJAG_02571","SJAG_04223","SJAG_04553","SJAG_01418","SJAG_03231","SJAG_02314","SJAG_04692","SJAG_00259","SJAG_05302","SJAG_03693","SJAG_00840","SJAG_06046","SJAG_04403","SJAG_00449","SJAG_00170","SJAG_02994","SJAG_04670","SJAG_00277","SJAG_04547"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117197],"is_not":false,"summary":null,"term":"GO:0140104"},{"annotations":[77547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000036"},{"annotations":[69197,69520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140663"},{"annotations":[89795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[98325,105467,96467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[115054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[62048,63055,104019,93494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016531"},{"annotations":[115580,110043,113239,118894,100021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000511"},{"annotations":[110724,117064,114778,119960,96933,94222,110729,116525,96688,97312,112177,109665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000510"},{"annotations":[113142,104811,111616,97184,90645,91896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140713"},{"annotations":[102467,115853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034986"},{"annotations":[94809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140132"},{"annotations":[94629,80394,112966,76238,96692,112364,89733,106702,113755,114220,116107,105414,80334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032977"},{"annotations":[119256,73322,77888,115507,78185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005049"},{"annotations":[119257,76747,95296,104457,74366,72740,79691,74613,78095,75482,95243,75419,98382,116440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061608"},{"annotations":[106037,106722,100889,89454,120624,109308,119047,89758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140597"},{"annotations":[94981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016532"}]},"cv_name":"molecular_function","definition":"Directly binding to a specific ion or molecule and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["GOC:molecular_function_refactoring","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":78,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00259":null,"SJAG_00277":null,"SJAG_00449":null,"SJAG_00532":null,"SJAG_00569":null,"SJAG_00586":null,"SJAG_00687":null,"SJAG_00840":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00942":null,"SJAG_00968":null,"SJAG_01005":null,"SJAG_01083":null,"SJAG_01122":null,"SJAG_01127":null,"SJAG_01140":null,"SJAG_01178":null,"SJAG_01238":null,"SJAG_01240":null,"SJAG_01358":null,"SJAG_01405":null,"SJAG_01418":null,"SJAG_01496":null,"SJAG_01534":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_01940":null,"SJAG_02035":null,"SJAG_02065":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02348":null,"SJAG_02361":null,"SJAG_02416":null,"SJAG_02425":null,"SJAG_02437":null,"SJAG_02439":null,"SJAG_02571":null,"SJAG_02661":null,"SJAG_02698":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02906":null,"SJAG_02994":null,"SJAG_02998":null,"SJAG_03128":null,"SJAG_03231":null,"SJAG_03322":null,"SJAG_03366":null,"SJAG_03470":null,"SJAG_03633":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03798":null,"SJAG_03862":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_03959":null,"SJAG_04038":null,"SJAG_04180":null,"SJAG_04223":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04366":null,"SJAG_04403":null,"SJAG_04411":null,"SJAG_04547":null,"SJAG_04553":null,"SJAG_04561":null,"SJAG_04670":null,"SJAG_04692":null,"SJAG_04758":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_06046":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular carrier activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-3204318","Reactome:R-HSA-3149494","Reactome:R-HSA-3149563","Reactome:R-HSA-1449687","Reactome:R-HSA-3159259"],"termid":"GO:0140104","terms_by_termid":{"GO:0000036":null,"GO:0000510":null,"GO:0000511":null,"GO:0005049":null,"GO:0016531":null,"GO:0016532":null,"GO:0032977":null,"GO:0034986":null,"GO:0061608":null,"GO:0140104":null,"GO:0140132":null,"GO:0140597":null,"GO:0140663":null,"GO:0140665":null,"GO:0140674":null,"GO:0140713":null,"GO:0140849":null}}


id: GO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that links the outer microtubule doublet of a 9+2 type ciliary or flagellar axoneme with the sheath that surrounds the central pair of microtubules. Composed of a stalk that attaches to each doublet microtubule and a globular structure (spoke head) that projects toward the central pair of microtubules.","definition_xrefs":["PMID:9450971","GOC:krc","PMID:34871179","PMID:25694453","ISBN:0124325653","PMID:22118931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"radial spoke","secondary_identifiers":["Wikipedia:Radial_spoke"],"termid":"GO:0001534"}


id: PBO:0075616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide peptidase like 2B","termid":"PBO:0075616"}


id: PBO:0000762
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.3","termid":"PBO:0000762"}


id: GO:0032338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of inhibin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"inhibin secretion","termid":"GO:0032334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of inhibin secretion","termid":"GO:0032338"}


id: PBO:0056635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 13L","termid":"PBO:0056635"}


id: MONDO:1011768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone spavin, non-human animal","secondary_identifiers":["OMIA:001232"],"termid":"MONDO:1011768","xrefs":{"Monarch":{"xref_id":"1011768"}}}


id: GO:0099100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A cation channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G-protein gated monoatomic ion channel activity","termid":"GO:0099099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"G-protein gated monoatomic cation channel activity","synonyms":[{"name":"G-protein gated cation channel activity","type":"broad"}],"termid":"GO:0099100"}


id: PBO:0040885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 8a","termid":"PBO:0040885"}


id: PBO:0080831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAP1 pseudogene 2","termid":"PBO:0080831"}


id: PBO:0029412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_response_to_mitotic_cell_cycle_checkpoint_signaling","termid":"PBO:0029412"}


id: PBO:0079041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-3","termid":"PBO:0079041"}


id: GO:0052729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + N,N-dimethylglycine = S-adenosyl-L-homocysteine + betaine.","definition_xrefs":["RHEA:10072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"dimethylglycine N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07244","EC:2.1.1.161","MetaCyc:RXN-9680"],"synonyms":[{"name":"ApDMT","type":"related"},{"name":"S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase activity","type":"related"}],"termid":"GO:0052729"}


id: PBO:0059102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 2","termid":"PBO:0059102"}


id: GO:1902129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (-)-lariciresinol.","definition_xrefs":["PMID:9872995","GOC:TermGenie","PMID:15949826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"(-)-lariciresinol metabolic process","termid":"GO:1902127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(-)-lariciresinol biosynthetic process","synonyms":[{"name":"(-)-lariciresinol anabolism","type":"exact"},{"name":"(-)-lariciresinol biosynthesis","type":"exact"},{"name":"(-)-lariciresinol formation","type":"exact"},{"name":"(-)-lariciresinol synthesis","type":"exact"}],"termid":"GO:1902129"}


id: GO:0098567
data:
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id: PBO:0068816
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 54, pseudogene","termid":"PBO:0068816"}


id: PBO:0081963
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida like domain containing 1","termid":"PBO:0081963"}


id: _global:input_of
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  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of has input","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"participates_in","termid":"_global:participates_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"input_of","secondary_identifiers":["RO:0002352"],"termid":"_global:input_of"}


id: GO:0045289
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the generalized reaction: luciferin + O2 = oxidized luciferin + CO2 + light. There may be additional substrates and reactants involved in the reaction. The reaction results in light emission as luciferin returns to the ground state after enzymatic oxidation.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"luciferin monooxygenase activity","synonyms":[{"name":"luciferase activity","type":"exact"},{"name":"luciferase monooxygenase activity","type":"related"}],"termid":"GO:0045289"}


id: GO:0033467
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving CMP-keto-3-deoxy-D-manno-octulosonic acid, a substance composed of the acidic sugar 3-deoxy-D-manno-octulosonic acid in glycosidic linkage with cytidine monophosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process","synonyms":[{"name":"CMP-KDO metabolic process","type":"exact"},{"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid metabolism","type":"exact"},{"name":"CMP-ketodeoxyoctanoate metabolic process","type":"related"}],"termid":"GO:0033467"}


id: GO:0008710
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + H+ + pimelyl-CoA = 8-amino-7-oxononanoate + CO2 + CoA.","definition_xrefs":["RHEA:20712","EC:2.3.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"8-amino-7-oxononanoate synthase activity","secondary_identifiers":["KEGG_REACTION:R03210","MetaCyc:7KAPSYN-RXN"],"synonyms":[{"name":"6-carboxyhexanoyl-CoA:L-alanine C-carboxyhexanoyltransferase (decarboxylating)","type":"related"},{"name":"7-KAP synthetase activity","type":"related"},{"name":"7-keto-8-amino-pelargonic acid synthetase activity","type":"related"},{"name":"7-keto-8-aminopelargonic acid synthetase activity","type":"related"},{"name":"7-keto-8-aminopelargonic synthetase activity","type":"related"},{"name":"8-amino-7-ketopelargonate synthase activity","type":"related"},{"name":"8-amino-7-oxopelargonate synthase activity","type":"related"},{"name":"AONS activity","type":"related"}],"termid":"GO:0008710"}


id: GO:0035249
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id: MONDO:0009357
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humeroradial synostosis","termid":"MONDO:0007737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humeroradial synostosis with craniofacial anomalies","secondary_identifiers":["UMLS:C1968717","OMIM:236410","MEDGEN:369834","MESH:C566888"],"synonyms":[{"name":"humeroradial synostosis with craniofacial anomalies","type":"exact"}],"termid":"MONDO:0009357","xrefs":{"Monarch":{"xref_id":"0009357"}}}


id: FYPO:0002351
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id: PBO:0024869
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  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not bind rpb1 CTD peptides in vitro","termid":"PBO:0024869"}


id: MONDO:0971068
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Phelan-McDermid syndrome","termid":"MONDO:0011652"},{"relation_name":"is_a","term_name":"chromosome 22q deletion","termid":"MONDO:0022760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phelan-McDermid syndrome due to 22q13.3 deletion","secondary_identifiers":["Orphanet:662169"],"termid":"MONDO:0971068","xrefs":{"Monarch":{"xref_id":"0971068"}}}


id: PBO:0002426
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR54b","termid":"PBO:0002426"}


id: PBO:0055952
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 61","termid":"PBO:0055952"}


id: PBO:0063434
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 8","termid":"PBO:0063434"}


id: PBO:0027602
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id: RO:0003307
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id: PBO:0055979
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 2","termid":"PBO:0055979"}


id: PBO:0044465
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily X member 1","termid":"PBO:0044465"}


id: GO:0018774
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id: GO:0016757
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id: MOD:01362
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id: PBO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit 7a (predicted)","termid":"PBO:0002789"}


id: MONDO:0004352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma of the brain occurring in adults.","definition_xrefs":["NCIT:C9372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymal tumor of brain","termid":"MONDO:0004245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult brain ependymoma","secondary_identifiers":["MEDGEN:231033","DOID:7750","UMLS:C1332186"],"synonyms":[{"name":"adult brain ependymoma","type":"exact"},{"name":"brain ependymoma","type":"broad"}],"termid":"MONDO:0004352","xrefs":{"Monarch":{"xref_id":"0004352"}}}


id: PBO:0044922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DGCR8 microprocessor complex subunit","termid":"PBO:0044922"}


id: MONDO:0013426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Loeys-Dietz syndrome","termid":"MONDO:0018954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"aneurysm-osteoarthritis syndrome","secondary_identifiers":["Orphanet:284984","GARD:10997","DOID:0070237","UMLS:C3151087","MEDGEN:462437","OMIM:613795"],"synonyms":[{"name":"LDS3","type":"related"},{"name":"Loeys-Dietz syndrome 3","type":"related"},{"name":"Loeys-Dietz syndrome type 3","type":"exact"},{"name":"Loeys-Dietz syndrome with osteoarthritis","type":"related"},{"name":"Loeys-Dietz syndrome, type 1C","type":"related"},{"name":"Loeys-Dietz syndrome, type 1C (formerly)","type":"related"},{"name":"Loeys-Dietz syndrome, type 1C, formerly","type":"related"},{"name":"Loeys-Dietz syndrome, type 3","type":"related"},{"name":"aneurysm - osteoarthritis syndrome","type":"related"},{"name":"aneurysm-osteoarthritis syndrome","type":"exact"},{"name":"aneurysms-osteoarthritis syndrome","type":"related"}],"termid":"MONDO:0013426","xrefs":{"Monarch":{"xref_id":"0013426"}}}


id: PBO:0082602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin light chain; subunit of the major coat protein involved in intracellular protein transport and endocytosis; regulates endocytic progression; thought to regulate clathrin function; the clathrin triskelion is a trimeric molecule composed of three heavy chains that radiate from a vertex and three light chains which bind noncovalently near the vertex of the triskelion","termid":"PBO:0082602"}


id: GO:1900627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of arugosin biosynthetic process","termid":"GO:1900626"},{"relation_name":"negatively_regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of arugosin biosynthetic process","synonyms":[{"name":"down regulation of arugosin anabolism","type":"exact"},{"name":"down regulation of arugosin biosynthesis","type":"exact"},{"name":"down regulation of arugosin biosynthetic process","type":"exact"},{"name":"down regulation of arugosin formation","type":"exact"},{"name":"down regulation of arugosin synthesis","type":"exact"},{"name":"down-regulation of arugosin anabolism","type":"exact"},{"name":"down-regulation of arugosin biosynthesis","type":"exact"},{"name":"down-regulation of arugosin biosynthetic process","type":"exact"},{"name":"down-regulation of arugosin formation","type":"exact"},{"name":"down-regulation of arugosin synthesis","type":"exact"},{"name":"downregulation of arugosin anabolism","type":"exact"},{"name":"downregulation of arugosin biosynthesis","type":"exact"},{"name":"downregulation of arugosin biosynthetic process","type":"exact"},{"name":"downregulation of arugosin formation","type":"exact"},{"name":"downregulation of arugosin synthesis","type":"exact"},{"name":"inhibition of arugosin anabolism","type":"exact"},{"name":"inhibition of arugosin biosynthesis","type":"exact"},{"name":"inhibition of arugosin biosynthetic process","type":"narrow"},{"name":"inhibition of arugosin formation","type":"exact"},{"name":"inhibition of arugosin synthesis","type":"exact"},{"name":"negative regulation of arugosin anabolism","type":"exact"},{"name":"negative regulation of arugosin biosynthesis","type":"exact"},{"name":"negative regulation of arugosin formation","type":"exact"},{"name":"negative regulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900627"}


id: PBO:0053118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 8","termid":"PBO:0053118"}


id: PBO:0052508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 22","termid":"PBO:0052508"}


id: MONDO:0009044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crigler-Najjar syndrome (CNS) is a hereditary disorder of bilirubin metabolism characterized by unconjugated hyperbilirubinemia due to a hepatic deficit of bilirubin glucuronosyltransferase (GT) activity. Two types have been described, CNS types 1 and 2. CNS1 is characterized by a complete deficit of the enzyme and is unaffected by phenobarbital induction therapy, whereas the enzymatic deficit is partial and responds to phenobarbital in CNS2.","definition_xrefs":["Orphanet:205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary hyperbilirubinemia","termid":"MONDO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Crigler-Najjar syndrome","secondary_identifiers":["DOID:3803","MEDGEN:1789261","NANDO:2100272","NANDO:2200941","MedDRA:10011386","icd11.foundation:291439191","GARD:16526","ICD10CM:E80.5","MESH:D003414","SCTID:28259009","UMLS:C5551003","NCIT:C84656"],"synonyms":[{"name":"Crigler Najjar Syndrome","type":"exact"},{"name":"Crigler Najjar syndrome","type":"exact"},{"name":"Crigler-Najjar syndrome","type":"exact"},{"name":"UGT deficiency","type":"exact"},{"name":"bilirubin UDP glucuronyl transferase deficiency","type":"exact"},{"name":"bilirubin uridinediphosphate glucuronosyltransferase deficiency","type":"exact"},{"name":"bilirubin-UGT deficiency","type":"exact"},{"name":"hereditary unconjugated hyperbilirubinemia","type":"exact"}],"termid":"MONDO:0009044","xrefs":{"Monarch":{"xref_id":"0009044"}}}


id: PBO:0004672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine transaminase Car2","termid":"PBO:0004672"}


id: PBO:0043100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 12","termid":"PBO:0043100"}


id: PBO:0074070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 45","termid":"PBO:0074070"}


id: PBO:0116689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 17B","termid":"PBO:0116689"}


id: FYPO:0002776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sumoylated protein measured in a cell is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal level of sumoylated protein in cell","synonyms":[{"name":"normal level of sumoylated protein during vegetative growth","type":"exact"},{"name":"normal level of sumoylated protein in cell during mitotic cell cycle","type":"related"},{"name":"normal sumoylated protein accumulation","type":"related"},{"name":"normal sumoylated protein level","type":"exact"}],"termid":"FYPO:0002776"}


id: PBO:0026641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_mitotic_G2_phase","termid":"PBO:0026641"}


id: PBO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defect in REreplication","termid":"PBO:0000353"}


id: GO:0097263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eoxin D4 + H20 = eoxin E4 + glycine.","definition_xrefs":["PMID:18647347","GOC:mw","PMID:18184802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0008233","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"eoxin E4 synthase activity","secondary_identifiers":["Reactome:R-HSA-2161868"],"termid":"GO:0097263"}


id: MONDO:0010065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinocerebellar ataxia type 2","termid":"MONDO:0008458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar degeneration with slow eye movements","secondary_identifiers":["OMIM:271322"],"synonyms":[{"name":"SDSEM","type":"related"},{"name":"spinocerebellar degeneration with slow eye movements","type":"exact"}],"termid":"MONDO:0010065","xrefs":{"Monarch":{"xref_id":"0010065"}}}


id: PBO:0085713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds1p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0085713"}


id: PBO:0117086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA2 antisense RNA 2","termid":"PBO:0117086"}


id: PBO:0090987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg2","termid":"PBO:0090987"}


id: MONDO:0005519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising in the renal pelvis. The majority of renal pelvis carcinomas are transitional cell and less frequently squamous cell carcinomas.","definition_xrefs":["EFO:0005582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal carcinoma","termid":"MONDO:0005206"},{"relation_name":"is_a","term_name":"malignant renal pelvis neoplasm","termid":"MONDO:0044919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"renal pelvis carcinoma","secondary_identifiers":["UMLS:C1335749","NCIT:C6142","ICD9:189.1","ICD10CM:C65","MEDGEN:235548","SCTID:363457009","DOID:4919"],"synonyms":[{"name":"cancer of renal pelvis","type":"broad"},{"name":"carcinoma of kidney pelvis","type":"exact"},{"name":"carcinoma of renal pelvis","type":"exact"},{"name":"carcinoma of the kidney pelvis","type":"exact"},{"name":"carcinoma of the renal pelvis","type":"exact"},{"name":"kidney pelvis carcinoma","type":"exact"},{"name":"kidney renal pelvis cancer","type":"exact"},{"name":"malignant neoplasm of renal pelvis","type":"broad"},{"name":"malignant renal pelvis neoplasm","type":"broad"},{"name":"malignant tumour of renal pelvis","type":"broad"},{"name":"renal pelvis cancer","type":"broad"},{"name":"renal pelvis carcinoma","type":"exact"}],"termid":"MONDO:0005519","xrefs":{"Monarch":{"xref_id":"0005519"}}}


id: MONDO:0016476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Beckwith-Wiedemann syndrome","termid":"MONDO:0007534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Beckwith-Wiedemann syndrome due to CDKN1C mutation","secondary_identifiers":["Orphanet:231120","GARD:17160","MEDGEN:1826157","UMLS:C5680918"],"termid":"MONDO:0016476","xrefs":{"Monarch":{"xref_id":"0016476"}}}


id: SO:0001918
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytosine methylated at the 5 carbon.","definition_xrefs":["SO:rtapella"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_methylcytosine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf","http://www.insdc.org/files/feature_table.html#7.4.2"],"synonyms":[{"name":"5 methylcytosine","type":"exact"},{"name":"5-mC","type":"exact"},{"name":"m-5C","type":"exact"},{"name":"m5c","type":"exact"}],"termid":"SO:0001918"}


id: PBO:0056767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 18","termid":"PBO:0056767"}


id: GO:0046641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell activation","termid":"GO:0046635"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"positively_regulates","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of alpha-beta T cell proliferation","synonyms":[{"name":"activation of alpha-beta T cell proliferation","type":"narrow"},{"name":"positive regulation of alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of alpha-beta T-cell proliferation","type":"exact"},{"name":"positive regulation of alpha-beta T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of alpha-beta T cell proliferation","type":"narrow"},{"name":"up regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"up-regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"upregulation of alpha-beta T cell proliferation","type":"exact"}],"termid":"GO:0046641"}


id: GO:0102566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-oleoylglycerone 3-phosphate + NADPH + H+ = 1-oleoyl-sn-glycero-3-phosphate + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-acyl dihydroxyacetone phosphate reductase activity (obsolete GO:0102566)","termid":"GO:0102566"}


id: GO:0052815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain fatty acyl-CoA + H2O = a medium-chain fatty acid + CoA + H+. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:68184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"medium-chain fatty acyl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:3.1.2.19-RXN"],"synonyms":[{"name":"medium-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"medium-chain acyl-thioester hydrolase activity","type":"related"},{"name":"medium-chain hydrolase activity","type":"related"},{"name":"medium-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052815"}


id: PBO:0080518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 4, pseudogene","termid":"PBO:0080518"}


id: MOD:01314
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(1)H,4x(12)C-labeled N6-succinyl-L-lysine.","definition_xrefs":["PubMed:12716131","Unimod:64#K","PubMed:11857757","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"4x(1)H,4x(12)C-labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent light form (K)","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:01314"}


id: PBO:0076057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin like 3","termid":"PBO:0076057"}


id: GO:0003962
data:
  {"annotated_genes":["SJAG_03102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77054],"is_not":false,"summary":null,"term":"GO:0003962"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + O-succinyl-L-homoserine = H+ + L,L-cystathionine + succinate.","definition_xrefs":["RHEA:20397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cystathionine gamma-synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.5.1.48","MetaCyc:O-SUCCHOMOSERLYASE-RXN","GO:0000505"],"synonyms":[{"name":"CTT gamma synthase activity","type":"exact"},{"name":"O-succinyl-L-homoserine (thiol)-lyase activity","type":"exact"},{"name":"O-succinyl-L-homoserine succinate-lyase (adding cysteine) activity","type":"related"},{"name":"O-succinyl-L-homoserine succinate-lyase activity","type":"exact"},{"name":"O-succinylhomoserine (thiol)-lyase activity","type":"related"},{"name":"O-succinylhomoserine synthase activity","type":"related"},{"name":"O-succinylhomoserine synthetase activity","type":"related"},{"name":"O4-succinyl-L-homoserine:L-cysteine S-(3-amino-3-carboxypropyl)transferase activity","type":"related"},{"name":"cystathionine g-synthase activity","type":"exact"},{"name":"cystathionine gamma synthase activity","type":"exact"},{"name":"cystathionine gamma-synthase activity (acts on O-phosphohomoserine)","type":"narrow"},{"name":"cystathionine synthase activity","type":"related"},{"name":"cystathionine synthetase activity","type":"related"},{"name":"homoserine O-transsuccinylase activity","type":"broad"},{"name":"homoserine transsuccinylase activity","type":"broad"}],"termid":"GO:0003962","terms_by_termid":{"GO:0003962":null}}


id: GO:0044298
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane of a cell that bears surface projections such as axons, dendrites, cilia, or flagella, excluding the plasma membrane on cell projections.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"cell body","termid":"GO:0044297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cell body membrane","synonyms":[{"name":"cell soma membrane","type":"exact"}],"termid":"GO:0044298"}


id: FYPO:0006824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:12479804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"premature protein localization to mitotic spindle pole body","synonyms":[{"name":"advanced protein localization to mitotic spindle pole body","type":"exact"},{"name":"precocious protein localization to mitotic spindle pole body","type":"related"},{"name":"premature protein localisation to mitotic spindle pole body","type":"exact"},{"name":"premature protein localization to mitotic SPB","type":"exact"},{"name":"premature protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"premature protein localization to spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0006824"}


id: PBO:0036027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_deubiquitination_following_cellular_response_to_hydroxyurea_during_vegetative_growth","termid":"PBO:0036027"}


id: PBO:0067271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 346, pseudogene","termid":"PBO:0067271"}


id: MONDO:0016235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete complex vascular malformation with associated anomalies (obsolete MONDO:0016235)","secondary_identifiers":["Orphanet:211277"],"synonyms":[{"name":"hemangiolymphangioma","type":"exact"}],"termid":"MONDO:0016235","xrefs":{"Monarch":{"xref_id":"0016235"}}}


id: MONDO:0034733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare otorhinolaryngological malformation characterized by a hypoplastic or absent cochlear nerve, resulting in variable hearing loss or total deafness, depending on the quantity of nerve fibers present. The condition can be unilateral or bilateral, occur as an isolated malformation or in the context of a complex syndrome, and may be associated with a hypoplastic internal auditory or cochlear nerve canal. [Orphanet:502318]","definition_xrefs":["Orphanet:502318"],"gene_count":0,"genotype_count":0,"name":"obsolete cochlear nerve deficiency (obsolete MONDO:0034733)","secondary_identifiers":["ICD10CM:H93.3"],"termid":"MONDO:0034733","xrefs":{"Monarch":{"xref_id":"0034733"}}}


id: PBO:0058270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4648","termid":"PBO:0058270"}


id: PBO:0059602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 14","termid":"PBO:0059602"}


id: PBO:0018103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, similar to a region of alpha-galactosidase","termid":"PBO:0018103"}


id: PBO:0063503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoinositide dependent protein kinase 2, pseudogene","termid":"PBO:0063503"}


id: PBO:0084289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral plasma membrane protein; required for axial budding in haploid cells; localizes to the incipient bud site and bud neck; glycosylated by Pmt4p; potential Cdc28p substrate","termid":"PBO:0084289"}


id: GO:1905837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triterpenoid stimulus.","definition_xrefs":["GO_REF:0000071","PMID:28078994","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to triterpenoid","termid":"GO:1905836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to triterpenoid","termid":"GO:1905837"}


id: GO:0022804
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id: FYPO:0005836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip does not occur. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"abolished protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"abolished protein transport during mitotic cell cycle","type":"related"},{"name":"protein transport along microtubule to cell tip abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005836"}


id: PBO:0072231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 6","termid":"PBO:0072231"}


id: PBO:0068577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 28, pseudogene","termid":"PBO:0068577"}


id: MONDO:0008662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant vitreoretinochoroidopathy (ADVIRC) is a genetic vitreous-retinal disease characterized by ocular developmental anomalies such as microcornea, a shallow anterior chamber, glaucoma and cataract. Abnormal chorioretinal pigmentation is present, usually lying between the vortex veins and the ora serrata for 360 degrees.","definition_xrefs":["Orphanet:3086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BEST1-related vitreoretinochoroidopathy","termid":"MONDO:0700240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"autosomal dominant vitreoretinochoroidopathy","secondary_identifiers":["MEDGEN:854768","icd11.foundation:96951767","GARD:5507","MESH:C536352","OMIM:193220","ICD10CM:H35.5","SCTID:711162004","UMLS:C3888099","DOID:0111569"],"synonyms":[{"name":"ADVIRC","type":"exact"},{"name":"VRCP","type":"related"},{"name":"VRCP autosomal dominant","type":"related"},{"name":"microcornea, Rod-cone dystrophy, cataract, and posterior staphyloma","type":"related"},{"name":"vitreoretinochoroidopathy","type":"related"},{"name":"vitreoretinochoroidopathy dominant","type":"related"},{"name":"vitreoretinochoroidopathy with microcornea, glaucoma, and cataract","type":"related"},{"name":"vitreoretinochoroidopathy, autosomal dominant","type":"related"},{"name":"vitreoretinochoroidopathy, autosomal dominant, with nanophthalmos","type":"related"}],"termid":"MONDO:0008662","xrefs":{"Monarch":{"xref_id":"0008662"}}}


id: PBO:0062656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 6 pseudogene","termid":"PBO:0062656"}


id: GO:0140272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex from a different species, for example a pathogen molecule binding to a host protein.","definition_xrefs":["PMID:28861068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"exogenous protein binding","termid":"GO:0140272"}


id: PR:Q9P6P6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L3, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01133","PANTHER:PTHR11229:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3-like mitochondrial ribosomal protein Mrpl9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.17c","secondary_identifiers":["UniProtKB:Q9P6P6"],"synonyms":[{"name":"54S ribosomal protein L9, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"SPAC644.17c","type":"related"},{"name":"Spom972h-MRPL3","type":"exact"}],"termid":"PR:Q9P6P6"}


id: FYPO:0004149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxal kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal pyridoxal kinase activity","termid":"FYPO:0004149"}


id: MONDO:0011600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by postsynaptic neuromuscular junction defects, early-onset progressive muscle weakness, and prolonged opening and activity of the acetylcholine receptor channel that has material basis in heterozygous or rarely biallelic mutation in the CHRNE gene on chromosome 17p13.","definition_xrefs":["PMID:25792100","DOID:0110678","PMID:7531341","PMID:12141316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 4","termid":"MONDO:1040021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 4A","secondary_identifiers":["OMIM:605809","MEDGEN:908188","GARD:15387","UMLS:C4225413"],"synonyms":[{"name":"CMS Ia1","type":"exact"},{"name":"CMS1A1","type":"exact"},{"name":"CMS4A","type":"exact"},{"name":"Cms Ia1","type":"related"},{"name":"Cms Ia1, formerly","type":"related"},{"name":"congenital myasthenic syndrome 4A slow-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 4A","type":"exact"},{"name":"congenital myasthenic syndrome type Ia1","type":"related"},{"name":"congenital myasthenic syndrome type Ia1, formerly","type":"related"},{"name":"congenital myasthenic syndrometype Ia1","type":"exact"},{"name":"myasthenic syndrome, congenital, 4A, slow-channel","type":"related"}],"termid":"MONDO:0011600","xrefs":{"Monarch":{"xref_id":"0011600"}}}


id: PBO:0066705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 2","termid":"PBO:0066705"}


id: GO:0004021
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113197],"is_not":false,"summary":null,"term":"GO:0004021"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-alanine = L-glutamate + pyruvate.","definition_xrefs":["RHEA:19453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine-oxo-acid transaminase activity","termid":"GO:0047635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"L-alanine:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-507749","Reactome:R-HSA-70524","KEGG_REACTION:R00258","MetaCyc:ALANINE-AMINOTRANSFERASE-RXN","EC:2.6.1.2","Reactome:R-HSA-507775","Reactome:R-HSA-70523"],"synonyms":[{"name":"ALT","type":"related"},{"name":"GPT","type":"related"},{"name":"L-alanine aminotransferase activity","type":"broad"},{"name":"L-alanine transaminase activity","type":"broad"},{"name":"L-alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine aminotransferase activity","type":"broad"},{"name":"alanine transaminase activity","type":"broad"},{"name":"alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine-pyruvate aminotransferase activity","type":"related"},{"name":"beta-alanine aminotransferase","type":"broad"},{"name":"glutamic acid-pyruvic acid transaminase activity","type":"related"},{"name":"glutamic--alanine transaminase activity","type":"related"},{"name":"glutamic--pyruvic transaminase activity","type":"related"},{"name":"glutamic-pyruvic aminotransferase activity","type":"related"},{"name":"pyruvate transaminase activity","type":"broad"},{"name":"pyruvate-alanine aminotransferase activity","type":"related"},{"name":"pyruvate-glutamate transaminase activity","type":"related"}],"termid":"GO:0004021","terms_by_termid":{"GO:0004021":null}}


id: PBO:0071217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 58","termid":"PBO:0071217"}


id: GO:0046244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid metabolic process","termid":"GO:0009696"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"salicylic acid catabolic process","synonyms":[{"name":"salicylic acid breakdown","type":"exact"},{"name":"salicylic acid catabolism","type":"exact"},{"name":"salicylic acid degradation","type":"exact"}],"termid":"GO:0046244"}


id: GO:0046943
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id: PBO:0075982
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 6","termid":"PBO:0075982"}


id: PBO:0005796
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside-triphosphatase involved in SSU-rRNA maturation (predicted)","termid":"PBO:0005796"}


id: MONDO:0002104
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conversion disorder is a disorder in which a person experiences blindness, paralysis, or other symptoms affecting the nervous system that cannot be explained solely by a physical illness or injury. Symptoms usually begin suddenly after a period of emotional or physical distress or psychological conflict. Conversion disorder is thought to be caused by the bodys reaction to a stressful physical or emotional event. Some research has identified potential neurological changes that may be related to symptoms of the disorder. Diagnosis of conversion disorder is based on identifying particular signs that are common among people with the disorder, as well as performing tests to rule out other causes of the symptoms. Treatment may include psychotherapy, hypnosis, and stress management training to help reduce symptoms. Treatment of any underlying psychological disorder is also recommended. The affected body part may require physical or occupational therapy until symptoms resolve.","direct_ancestors":[{"relation_name":"is_a","term_name":"somatoform disorder","termid":"MONDO:0003117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conversion disorder","secondary_identifiers":["ICD9:300.11","MEDGEN:3230","UMLS:C0009946","DOID:1768","MESH:D003291"],"synonyms":[{"name":"FND","type":"related"},{"name":"conversion hysteria or reaction","type":"exact"},{"name":"conversion hysterical neurosis","type":"exact"},{"name":"functional movement disorder","type":"related"},{"name":"functional neurological disorder","type":"related"},{"name":"hysterical neurosis, conversion type","type":"exact"}],"termid":"MONDO:0002104","xrefs":{"Monarch":{"xref_id":"0002104"}}}


id: MOD:00416
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A change resulting in an alteration of the measured molecular mass of a peptide or protein hydroxyl amino acid phosphorylated promptly followed by secondary loss of a neutral trihydrogen phosphate molecular fragment.","definition_xrefs":["Unimod:23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with neutral loss of phosphate","termid":"MOD:00432"},{"relation_name":"is_a","term_name":"dehydrated residue","termid":"MOD:00704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation of an hydroxyl amino acid with prompt loss of phosphate","synonyms":[{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"}],"termid":"MOD:00416"}


id: PBO:0004973
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 8","termid":"PBO:0004973"}


id: _global:similar_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similar_to","termid":"_global:similar_to"}


id: GO:0034044
data:
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id: PBO:0067126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 172, pseudogene","termid":"PBO:0067126"}


id: FYPO:0004414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is increased during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased phosphatase activity during cellular response to phosphate starvation","synonyms":[{"name":"increased phosphatase activity during phosphate starvation","type":"exact"}],"termid":"FYPO:0004414"}


id: PBO:0045967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eosinophil granule ontogeny transcript","termid":"PBO:0045967"}


id: PBO:0040995
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id: GO:0006157
data:
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id: GO:0002309
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id: GO:0006310
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id: MONDO:0009219
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id: PBO:0029350
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id: FYPO:0003360
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id: GO:0034477
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id: MONDO:0027451
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id: SO:0002080
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the exon of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_exonic_variant","synonyms":[{"name":"incomplete transcript exonic variant","type":"exact"}],"termid":"SO:0002080"}


id: PBO:0044782
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,4-dienoyl-CoA reductase 2","termid":"PBO:0044782"}


id: GO:2001315
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id: GO:0051657
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id: PBO:0064078
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id: GO:0100007
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id: GO:0036022
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id: GO:0019966
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id: GO:0007534
data:
  {"annotated_genes":["SJAG_01076","SJAG_05239","SJAG_01419","SJAG_02460","SJAG_03221","SJAG_02079","SJAG_01601","SJAG_01495","SJAG_02828","SJAG_02556","SJAG_01677","SJAG_00247","SJAG_02226","SJAG_03097","SJAG_02724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89740,90987,91115,98040,99294,100997,102471,107995,108561,110453,112253,112777,117004,118787,120774],"is_not":false,"summary":null,"term":"GO:0007534"}]},"cv_name":"biological_process","definition":"The conversion of the mating-type locus from one allele to another resulting from the recombinational repair of a site-specific double-strand break at the mating-type locus with information from a silent donor sequence. There is no reciprocal exchange of information because the mating-type locus copies information from the donor sequence and the donor sequence remains unchanged.","definition_xrefs":["PMID:10716938","PMID:7646483","PMID:9928492","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic recombination","termid":"GO:0006312"},{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"},{"relation_name":"part_of","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01076":null,"SJAG_01419":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"gene conversion at mating-type locus","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034636","GO:0000728","GO:0010708","GO:0000734","GO:0031292","GO:0061500"],"synonyms":[{"name":"gene conversion at mating-type locus, DNA double-strand break formation","type":"narrow"},{"name":"gene conversion at mating-type locus, DNA double-strand break processing","type":"narrow"},{"name":"gene conversion at mating-type locus, DNA repair synthesis","type":"narrow"},{"name":"gene conversion at mating-type locus, termination of copy-synthesis","type":"narrow"},{"name":"heteroduplex formation involved in gene conversion at mating-type locus","type":"narrow"},{"name":"strand invasion involved in gene conversion at mating-type locus","type":"exact"}],"termid":"GO:0007534","terms_by_termid":{"GO:0007534":null}}


id: PBO:0041590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 4","termid":"PBO:0041590"}


id: MONDO:0005959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of symptoms that are two- to three-fold more common in those who work in large, energy-efficient buildings, associated with an increased frequency of headaches, lethargy, and dry skin. Clinical manifestations include hypersensitivity pneumonitis (alveolitis, extrinsic allergic); allergic rhinitis (rhinitis, allergic, perennial); asthma; infections, skin eruptions, and mucous membrane irritation syndromes. Current usage tends to be less restrictive with regard to the type of building and delineation of complaints. (From Segen, Dictionary of Modern Medicine, 1992)","definition_xrefs":["MESH:D018877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"sick building syndrome","secondary_identifiers":["EFO:0007484","UMLS:C0037050","SCTID:19076009","DOID:2710","MEDGEN:48661"],"termid":"MONDO:0005959","xrefs":{"Monarch":{"xref_id":"0005959"}}}


id: PBO:0082231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha' catalytic subunit of casein kinase 2 (CK2); CK2 is a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; protein abundance increases in response to DNA replication stress; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082231"}


id: PBO:0045739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBF transcription factor 2","termid":"PBO:0045739"}


id: MONDO:0005870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder caused by an infection with hookworms of the genus Necator, which settle in the host's small intestine, and cause abdominal pain, diarrhea, weight loss, and anemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necatoriasis","secondary_identifiers":["ICD9:126.9","UMLS:C0027528","DOID:2790","icd11.foundation:652000933","MEDGEN:10277","NCIT:C34838","SCTID:36667009","ICD10CM:B76.1","EFO:0007390","MESH:D009332"],"termid":"MONDO:0005870","xrefs":{"Monarch":{"xref_id":"0005870"}}}


id: PBO:0055111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2530","termid":"PBO:0055111"}


id: PBO:0052033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JRKL antisense RNA 1","termid":"PBO:0052033"}


id: PBO:0030923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_in_stationary_phase","termid":"PBO:0030923"}


id: PBO:0054099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1455","termid":"PBO:0054099"}


id: GO:0006202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanosine monophosphate into other compounds, including guanine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP catabolic process","termid":"GO:0046038"},{"relation_name":"is_a","term_name":"guanine metabolic process","termid":"GO:0046098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"GMP catabolic process to guanine","synonyms":[{"name":"GMP breakdown to guanine","type":"exact"},{"name":"GMP degradation to guanine","type":"exact"}],"termid":"GO:0006202"}


id: SO:0000681
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that has been processed \\\"incorrectly\\\", for example by the failure of splicing of one or more exons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aberrant_processed_transcript","synonyms":[{"name":"aberrant processed transcript","type":"exact"}],"termid":"SO:0000681"}


id: SO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript processing variant whereby the process of editing is disrupted with respect to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_processing_variant","termid":"SO:0001543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"editing_variant","synonyms":[{"name":"editing variant","type":"exact"}],"termid":"SO:0001544"}


id: PBO:0003137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase Car1","termid":"PBO:0003137"}


id: MONDO:0020622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--stoltzfus system (obsolete MONDO:0020622)","secondary_identifiers":["OMIM:111800"],"synonyms":[{"name":"BLOOD GROUP--STOLTZFUS SYSTEM","type":"related"},{"name":"Sf","type":"related"},{"name":"blood group, Stoltzfus system","type":"exact"}],"termid":"MONDO:0020622","xrefs":{"Monarch":{"xref_id":"0020622"}}}


id: GO:0015179
data:
  {"annotated_genes":["SJAG_03899","SJAG_00543","SJAG_04588","SJAG_04637","SJAG_03400","SJAG_04718","SJAG_03256","SJAG_04725","SJAG_02029","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000515"},{"annotations":[97888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[99228,80924,102248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[104704,111980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[80919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[80917,99229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[111981,104705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[80921,99230,104706,111982,102249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[109843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[102241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[80922,92444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[80918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the L-enantiomers of amino acids.","definition_xrefs":["GOC:ai","GOC:jsg","ISBN:0815340729","GOC:mah","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00543":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03899":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-212614"],"synonyms":[{"name":"L-amino acid transporter activity","type":"broad"}],"termid":"GO:0015179","terms_by_termid":{"GO:0000064":null,"GO:0000515":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0015182":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0034639":null,"GO:0061459":null}}


id: PBO:0029654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock","termid":"PBO:0029654"}


id: MONDO:0012098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 20 (SCA20) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by cerebellar dysarthria as the initial typical manifestation.","definition_xrefs":["Orphanet:101110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 20","secondary_identifiers":["UMLS:C1837541","MESH:C537199","DOID:0050971","GARD:9997","icd11.foundation:960716995","OMIM:608687","MEDGEN:373352","SCTID:718771009"],"synonyms":[{"name":"SCA20","type":"exact"},{"name":"chromosome 11q12 duplication syndrome, 260-Kb","type":"related"},{"name":"spinocerebellar ataxia 20","type":"related"},{"name":"spinocerebellar ataxia type 20","type":"exact"},{"name":"spinocerebellar ataxia with dysphonia","type":"related"},{"name":"spinocerebellar ataxia with spasmodic cough","type":"related"}],"termid":"MONDO:0012098","xrefs":{"Monarch":{"xref_id":"0012098"}}}


id: PBO:0065023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3 pseudogene 2","termid":"PBO:0065023"}


id: PBO:0086868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase with unknown cellular role; KKQ8 has a paralog, HAL5, that arose from the whole genome duplication","termid":"PBO:0086868"}


id: GO:0101030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a tRNA anticodon loop by replacing guanine with queuonine. Reaction is tRNA guanine + queuine = tRNA queuine + guanine.","definition_xrefs":["GOC:PomBase","GOC:vw","PMID:24911101"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA-guanine transglycosylation (obsolete GO:0101030)","termid":"GO:0101030"}


id: PBO:0027046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_2-oxoglutarate_dioxygenase_activity","termid":"PBO:0027046"}


id: PBO:0043548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type II alpha 1 chain","termid":"PBO:0043548"}


id: MONDO:0016057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brain tissue herniation through a congenital or acquired defect in the skull. The majority of congenital encephaloceles occur in the occipital or frontal regions. Clinical features include a protuberant mass that may be pulsatile. The quantity and location of protruding neural tissue determines the type and degree of neurologic deficit. Visual defects, psychomotor developmental delay, and persistent motor deficits frequently occur.","definition_xrefs":["MESH:D004677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cephalocele","termid":"MONDO:0017078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated encephalocele","secondary_identifiers":["Orphanet:199647","MedDRA:10014617","GARD:6333","MEDGEN:1830107","NORD:1089","UMLS:C5680519"],"synonyms":[{"name":"Encephalocele","type":"exact"},{"name":"bifid cranium","type":"related"},{"name":"craniocele","type":"related"},{"name":"cranium bifidum","type":"related"},{"name":"encephalocele","type":"related"}],"termid":"MONDO:0016057","xrefs":{"Monarch":{"xref_id":"0016057"}}}


id: FYPO:0000257
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"},"SJAG_01680:allele-2":{"allele_type":"amino_acid_mutation","description":"P470L","gene_uniquename":"SJAG_01680","name":"chk1-P470L","synonyms":[{"name":"chk1- hyperactive (chk1-hyp)","reference":"PMID:23090706","type":"exact"},{"name":"chk1-hyperactive (chk1-hyp)","reference":"PMID:20368354","type":"exact"}],"uniquename":"SJAG_01680:allele-2"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121416,121414,121415,121418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"},{"annotations":[121615,121616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[121382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007790"}],"single_locus_phenotype":[{"annotations":[121500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"},{"annotations":[121528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004165"},{"annotations":[121398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"},{"annotations":[121608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[121372,121523,121379,121200,121522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007790"},{"annotations":[121516,121519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000760"},{"annotations":[121592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[121575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[121269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"},{"annotations":[121213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[121518,121521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000579"},{"annotations":[121520,121517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"},{"annotations":[121606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000596"},{"annotations":[121323,121513,121515,121514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001357"},{"annotations":[121397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004693"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype that shows no detectable differences from normal. In fission yeast, the characteristics of wild type cells of the sequenced strain (972 h-) or the isogenic h+ or h90 strains are regarded as 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id: PBO:0042661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEACAM16, CEACAM19 and PVR antisense RNA 1","termid":"PBO:0042661"}


id: GO:0045962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which an integrated living unit or organism progresses from an initial condition to a later condition and increases the rate at which this time point is reached.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of development, heterochronic","synonyms":[{"name":"activation of development, heterochronic","type":"narrow"},{"name":"stimulation of development, heterochronic","type":"narrow"},{"name":"up regulation of development, heterochronic","type":"exact"},{"name":"up-regulation of development, heterochronic","type":"exact"},{"name":"upregulation of development, heterochronic","type":"exact"}],"termid":"GO:0045962"}


id: _global:disconnected_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is disconnected_from Y iff it is not the case that X overlaps Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disconnected_from","termid":"_global:disconnected_from"}


id: MONDO:0012446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"seborrhea-like dermatitis with psoriasiform elements","secondary_identifiers":["GARD:17039","MEDGEN:342832","MESH:C565217","OMIM:610227","Orphanet:168606","UMLS:C1853258"],"synonyms":[{"name":"seborrhea-like dermatitis with psoriasiform elements","type":"exact"}],"termid":"MONDO:0012446","xrefs":{"Monarch":{"xref_id":"0012446"}}}


id: MONDO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease or trauma involving a single peripheral nerve in isolation, or out of proportion to evidence of diffuse peripheral nerve dysfunction. Mononeuropathy multiplex refers to a condition characterized by multiple isolated nerve injuries. Mononeuropathies may result from a wide variety of causes, including ischemia; traumatic injury; compression; connective tissue diseases; cumulative trauma disorders; and other conditions.","definition_xrefs":["MESH:D020422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"mononeuropathy","secondary_identifiers":["DOID:1188","SCTID:128189008","icd11.foundation:1866592137","MEDGEN:99214","UMLS:C0494491","EFO:0009558"],"termid":"MONDO:0001397","xrefs":{"Monarch":{"xref_id":"0001397"}}}


id: PBO:0027328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_degradation_of_ribosomal_proteins","termid":"PBO:0027328"}


id: GO:0072468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A signal transduction process that contributes to a cell shape checkpoint.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transduction involved in cell shape checkpoint (obsolete GO:0072468)","termid":"GO:0072468"}


id: PBO:0048005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 5","termid":"PBO:0048005"}


id: PBO:0049259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goosecoid homeobox","termid":"PBO:0049259"}


id: GO:0010601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["PMID:18287041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of auxin biosynthetic process","termid":"GO:0010600"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"positive regulation of auxin metabolic process","termid":"GO:0090355"},{"relation_name":"positively_regulates","term_name":"auxin biosynthetic process","termid":"GO:0009851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of auxin biosynthetic process","termid":"GO:0010601"}


id: PR:O59810
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vigilin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04599","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vigilin 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.14","secondary_identifiers":["UniProtKB:O59810"],"synonyms":[{"name":"KH domain-containing protein vgl1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-HDLBP","type":"exact"}],"termid":"PR:O59810"}


id: GO:0033173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell by activation of a member of the NFAT protein family as a consequence of NFAT dephosphorylation by Ca(2+)-activated calcineurin. The cascade begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin dephosphorylates multiple phosphoserine residues on NFAT, resulting in the translocation of NFAT to the nucleus. The cascade ends with regulation of transcription by NFAT. The calcineurin-NFAT cascade lies downstream of many cell surface receptors, including G protein-coupled receptors (GPCRs) and receptor tyrosine kinases (RTKs) that signal to mobilize calcium ions (Ca2+).","definition_xrefs":["PMID:15928679","GOC:mah","GOC:lm","PMID:12975316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcineurin-mediated signaling","termid":"GO:0097720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"calcineurin-NFAT signaling cascade","synonyms":[{"name":"calcineurin-NFAT signaling pathway","type":"related"},{"name":"calcineurin-NFAT signalling pathway","type":"related"}],"termid":"GO:0033173"}


id: FYPO:0002118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified transporter activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0002114","FYPO:0000138","FYPO:0000002","FYPO:0000652","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased transporter activity","synonyms":[{"name":"reduced transporter activity","type":"exact"}],"termid":"FYPO:0002118"}


id: PBO:0065812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3 GTPase activating non-catalytic protein subunit 2","termid":"PBO:0065812"}


id: GO:0006493
data:
  {"annotated_genes":["SJAG_03150","SJAG_03149","SJAG_04906","SJAG_01021","SJAG_04053","SJAG_00598","SJAG_04095","SJAG_01264","SJAG_04316","SJAG_01491"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63905,76571,79295,81126,112663,112669,120051],"is_not":false,"summary":null,"term":"GO:0006493"},{"annotations":[107891,103439,94877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or via the phenol group of peptidyl-tyrosine, forming an O-glycan.","definition_xrefs":["ISBN:0879695595","PMID:33775405","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01491":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_04053":null,"SJAG_04095":null,"SJAG_04316":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein O-linked glycosylation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RESID:AA0157","RESID:AA0155","Reactome:R-HSA-5173105","RESID:AA0212","RESID:AA0154","RESID:AA0153"],"synonyms":[{"name":"protein amino acid O-linked glycosylation","type":"exact"}],"termid":"GO:0006493","terms_by_termid":{"GO:0006493":null,"GO:0035269":null}}


id: GO:0031288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sorocarp is generated and organized. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:mtg_sensu","GOC:kp","PMID:4332228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"sorocarp development","termid":"GO:0030587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp morphogenesis","synonyms":[{"name":"fruiting body morphogenesis","type":"broad"}],"termid":"GO:0031288"}


id: PBO:0054319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1711","termid":"PBO:0054319"}


id: PBO:0038328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obligate_parasite_of","termid":"PBO:0038328"}


id: PBO:0078433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-3","termid":"PBO:0078433"}


id: GO:0033378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protease to a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to T cell secretory granule","termid":"GO:0033376"},{"relation_name":"part_of","term_name":"protease localization to T cell secretory granule","termid":"GO:0033375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protease localization to T cell secretory granule","synonyms":[{"name":"establishment of protease localisation in T cell secretory granule","type":"exact"},{"name":"establishment of protease localization in T cell secretory granule","type":"exact"},{"name":"establishment of protease localization in T lymphocyte secretory granule","type":"exact"},{"name":"establishment of protease localization in T-cell secretory granule","type":"exact"},{"name":"establishment of protease localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033378"}


id: FYPO:0000202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of cytokinetic cell separation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of cytokinetic cell separation","synonyms":[{"name":"abnormal regulation of cell separation after cytokinesis","type":"exact"},{"name":"abnormal regulation of cell separation following cytokinesis","type":"exact"},{"name":"abnormal regulation of cytokinetic cell separation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of cytokinetic cell separation during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic cytokinetic cell separation","type":"exact"}],"termid":"FYPO:0000202"}


id: GO:0031925
data:
  {"annotated_genes":["SJAG_03808","SJAG_02152","SJAG_02962","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91970,91971,119463,120765],"is_not":false,"summary":null,"term":"GO:0031925"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyridoxal from one side of a membrane to the other. Pyridoxal, 3-hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxaldehyde, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"pyridoxal transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal transporter activity","type":"broad"}],"termid":"GO:0031925","terms_by_termid":{"GO:0031925":null}}


id: PBO:0058353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4726","termid":"PBO:0058353"}


id: PBO:0038539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 14A","termid":"PBO:0038539"}


id: PBO:0038666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 1","termid":"PBO:0038666"}


id: PBO:0028463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitotic_interphase","termid":"PBO:0028463"}


id: GO:0034635
data:
  {"annotated_genes":["SJAG_01344","SJAG_01660","SJAG_05213","SJAG_03497","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[115102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[120204,97935,98924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"}]},"cv_name":"biological_process","definition":"The directed movement of glutathione, the tripeptide glutamylcysteinylglycine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"tripeptide transport","termid":"GO:0042939"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glutathione transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034635","terms_by_termid":{"GO:0071996":null,"GO:0098709":null,"GO:0160007":null}}


id: PBO:0119786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sec61 translocon alpha subunit Sec61","termid":"PBO:0119786"}


id: PR:Q9USW2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- inp2 gene.","definition_xrefs":["UniProtKB:Q9USW2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inheritance of peroxisomes protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.06c","synonyms":[{"name":"Spom972h-inp2","type":"exact"}],"termid":"PR:Q9USW2"}


id: PBO:0028054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_horsetail_movement","termid":"PBO:0028054"}


id: GO:0035858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an eosinophil cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["CL:0000771","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"eosinophil fate commitment","termid":"GO:0035854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil fate determination","synonyms":[{"name":"eosinophil cell fate determination","type":"exact"}],"termid":"GO:0035858"}


id: PBO:0061425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ribosyldihydronicotinamide:quinone reductase 2","termid":"PBO:0061425"}


id: GO:0039518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host cytokine activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host cytokine activity (obsolete GO:0039518)","synonyms":[{"name":"down-regulation by virus of host cytokine activity","type":"exact"},{"name":"downregulation by virus of host cytokine activity","type":"exact"},{"name":"inhibition by virus of host cytokine activity","type":"narrow"},{"name":"negative regulation by virus of host cytokine activity","type":"exact"}],"termid":"GO:0039518"}


id: MONDO:0005744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-seminomatous malignant germ cell tumor composed of primitive germ cells. It is the most common malignant germ cell tumor in the pediatric population. It occurs in the infant testis, ovary, sacrococcygeal region, vagina, uterus, prostate, abdomen, liver, retroperitoneum, thorax, and pineal/third ventricle. The tumor mimics the yolk sac of the embryo and produces alpha-fetoprotein (AFP). Treatment includes: surgical resection, radiation, and chemotherapy. This tumor is very responsive to chemotherapy regimens that include cisplatinum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"yolk sac tumor","secondary_identifiers":["Orphanet:876","ONCOTREE:BYST","GARD:348","EFO:0007252","UMLS:C0014145","MedDRA:10048251","ICDO:9071/3","MEDGEN:41782","DOID:1911","NCIT:C3011","SCTID:404081005","NANDO:2200069"],"synonyms":[{"name":"endodermal sinus neoplasm","type":"exact"},{"name":"endodermal sinus tumor","type":"exact"},{"name":"endodermal sinus tumour","type":"exact"},{"name":"hepatoid yolk sac tumor","type":"exact"},{"name":"hepatoid yolk sac tumour","type":"exact"},{"name":"infantile embryonal carcinoma","type":"narrow"},{"name":"yolk SAC tumor, malignant","type":"exact"},{"name":"yolk Sac neoplasm","type":"exact"},{"name":"yolk Sac tumor","type":"exact"},{"name":"yolk Sac tumor site unspecified","type":"exact"},{"name":"yolk Sac tumour","type":"exact"},{"name":"yolk Sac tumour site unspecified","type":"exact"},{"name":"yolk sac tumor","type":"exact"}],"termid":"MONDO:0005744","xrefs":{"Monarch":{"xref_id":"0005744"}}}


id: PBO:0061637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16 like 1","termid":"PBO:0061637"}


id: PBO:0051932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 4","termid":"PBO:0051932"}


id: PBO:0060869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member A","termid":"PBO:0060869"}


id: MONDO:0019041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic inherited tumor (obsolete MONDO:0019041)","secondary_identifiers":["Orphanet:68336"],"synonyms":[{"name":"rare genetic tumor","type":"related"}],"termid":"MONDO:0019041","xrefs":{"Monarch":{"xref_id":"0019041"}}}


id: PBO:0053700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 901","termid":"PBO:0053700"}


id: PBO:0070558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 24","termid":"PBO:0070558"}


id: GO:0043620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from a DNA template as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:jl","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-templated transcription in response to stress (obsolete GO:0043620)","synonyms":[{"name":"regulation of DNA-dependent transcription in response to stress","type":"exact"}],"termid":"GO:0043620"}


id: GO:0044455
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a mitochondrial membrane, either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial membrane part (obsolete GO:0044455)","termid":"GO:0044455"}


id: GO:1904258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nuclear dicing body.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:25902521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"nuclear dicing body assembly","synonyms":[{"name":"D body assembly","type":"exact"},{"name":"D body formation","type":"exact"},{"name":"nuclear dicing body formation","type":"exact"}],"termid":"GO:1904258"}


id: GO:1902413
data:
  {"annotated_genes":["SJAG_01787","SJAG_02392","SJAG_04943","SJAG_01386","SJAG_00845","SJAG_02592","SJAG_03048","SJAG_02838","SJAG_01464","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94684,101548,104040,109027],"is_not":false,"summary":null,"term":"GO:1902413"},{"annotations":[105598,112721,97714,96216,104264,92594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[105599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[104269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cytokinesis.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis","termid":"GO:1902412"},{"relation_name":"negatively_regulates","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_04551":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cytokinesis after mitosis","type":"exact"},{"name":"down regulation of mitotic cytokinesis","type":"exact"},{"name":"down-regulation of cytokinesis after mitosis","type":"exact"},{"name":"down-regulation of mitotic cytokinesis","type":"exact"},{"name":"downregulation of cytokinesis after mitosis","type":"exact"},{"name":"downregulation of mitotic cytokinesis","type":"exact"},{"name":"inhibition of cytokinesis after mitosis","type":"narrow"},{"name":"inhibition of mitotic cytokinesis","type":"narrow"},{"name":"negative regulation of cytokinesis after mitosis","type":"exact"}],"termid":"GO:1902413","terms_by_termid":{"GO:1902413":null,"GO:1903472":null,"GO:1903500":null,"GO:1905757":null}}


id: FYECO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which micafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ echinocandin","termid":"FYECO:0000391"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ micafungin","termid":"FYECO:0000395"}


id: PBO:0044014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1 pseudogene 3","termid":"PBO:0044014"}


id: GO:0001042
data:
  {"annotated_genes":["SJAG_01744"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73275],"is_not":false,"summary":null,"term":"GO:0001042"}]},"cv_name":"molecular_function","definition":"Binding to a RNA polymerase I core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of seventeen subunits.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01744":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase I core binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0001042","terms_by_termid":{"GO:0001042":null}}


id: PBO:0085083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear encoded protein needed for splicing of mitochondrial intron; required for efficient splicing of mitochondrial COX1 aI5beta intron; mss18 mutations block cleavage of 5' exon - intron junction; phenotype of intronless strain suggests additional functions","termid":"PBO:0085083"}


id: GO:0046914
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id: PBO:0045336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK9 divergent transcript","termid":"PBO:0045336"}


id: GO:0000495
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82085],"is_not":false,"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a box H/ACA RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA 3'-end processing","termid":"GO:0031126"},{"relation_name":"is_a","term_name":"box H/ACA sno(s)RNA processing","termid":"GO:0034964"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016074","GO:0008150"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"box H/ACA RNA 3' end processing","type":"exact"},{"name":"box H/ACA sRNA 3'-end processing","type":"narrow"},{"name":"box H/ACA snoRNA 3'-end processing","type":"narrow"}],"termid":"GO:0000495","terms_by_termid":{"GO:0000495":null}}


id: MONDO:0010331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary heart disease, susceptibility to, 3","secondary_identifiers":["OMIM:300464","UMLS:C1845454","MEDGEN:337240"],"synonyms":[{"name":"Chds3","type":"related"},{"name":"coronary heart disease, susceptibility to, 3","type":"exact"},{"name":"coronary heart disease, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0010331","xrefs":{"Monarch":{"xref_id":"0010331"}}}


id: MONDO:0033558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammation, immune dysregulation, and eosinophilia","secondary_identifiers":["MEDGEN:1750270","OMIM:618999","UMLS:C5436572"],"synonyms":[{"name":"AIIDE","type":"related"},{"name":"AUTOINFLAMMATION, IMMUNE DYSREGULATION, AND EOSINOPHILIA","type":"related"},{"name":"Atopic Dermatitis, Enteritis, Colitis, and Eosinophilia","type":"related"}],"termid":"MONDO:0033558","xrefs":{"Monarch":{"xref_id":"0033558"}}}


id: GO:0051107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of DNA ligation, the re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA ligation (obsolete GO:0051107)","synonyms":[{"name":"down regulation of DNA ligation","type":"exact"},{"name":"down-regulation of DNA ligation","type":"exact"},{"name":"downregulation of DNA ligation","type":"exact"},{"name":"inhibition of DNA ligation","type":"narrow"}],"termid":"GO:0051107"}


id: PBO:0080149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventral anterior homeobox 1","termid":"PBO:0080149"}


id: GO:0106280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the UDP-N-acetylglucosamine biosynthetic process.","definition_xrefs":["PMID:32579556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0106278"},{"relation_name":"positively_regulates","term_name":"UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of UDP-N-acetylglucosamine biosynthetic process","synonyms":[{"name":"positive egulation of UDP-N-acetylglucosamine formation","type":"related"},{"name":"positive regulation of UDP-GlcNAc biosynthetic process","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine anabolism","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine biosynthesis","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine synthesis","type":"related"}],"termid":"GO:0106280"}


id: GO:0008794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arsenate + reduced glutaredoxin = arsenite + oxidized glutaredoxin. Glutaredoxin functions as the electron donor for arsenate reduction. The electron flow therefore is ( NADPH -> glutathione reductase (EC:1.6.4.2) -> ) glutathione -> glutaredoxin -> arsenate reductase, i.e. glutathione is reduced by glutathione reductase and glutaredoxin is reduced by glutathione.","definition_xrefs":["EC:1.20.4.1","PMID:10593884","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor","termid":"GO:0030614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"arsenate reductase (glutaredoxin) activity","secondary_identifiers":["RHEA:22016","UM-BBD_reactionID:r0635","MetaCyc:RXN-982"],"synonyms":[{"name":"glutharedoxin:arsenate oxidoreductase activity","type":"related"}],"termid":"GO:0008794"}


id: MONDO:0008501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sturge-Weber syndrome (SWS) is a rare congenital neurocutaneous disorder characterized by facial capillary malformations and/or cerebral and ocular ipsilateral vascular malformations that result in variable degrees of ocular and neurological anomalies.","definition_xrefs":["Orphanet:3205"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neurovascular malformation (obsolete MONDO:0015145)","termid":"MONDO:0015145"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic developmental defect of the eye (obsolete MONDO:0015218)","termid":"MONDO:0015218"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neurocutaneous syndrome with epilepsy (obsolete MONDO:0015651)","termid":"MONDO:0015651"},{"relation_name":"excluded_subClassOf","term_name":"obsolete obsolete rare capillary malformation with associated anomalies (obsolete MONDO:0018719)","termid":"MONDO:0018719"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Sturge-Weber syndrome","secondary_identifiers":["GARD:7706","MedDRA:10057653","MESH:D013341","NCIT:C3391","MedDRA:10042265","ICD9:759.6","icd11.foundation:1173035836","NANDO:2200830","MEDGEN:21361","OMIM:185300","NANDO:1200606","SCTID:19886006","UMLS:C0038505","DOID:0111563"],"synonyms":[{"name":"SWS","type":"exact"},{"name":"SWS type I - Facial and leptomeningeal angiomas","type":"related"},{"name":"SWS type II - Facial angioma alone, no CNS involvement","type":"related"},{"name":"SWS type III - isolated leptomeningeal angiomas","type":"related"},{"name":"Sturge Weber Syndrome","type":"exact"},{"name":"Sturge Weber syndrome","type":"exact"},{"name":"Sturge-Weber disease","type":"exact"},{"name":"Sturge-Weber syndrome","type":"exact"},{"name":"Sturge-Weber syndrome, somatic, mosaic","type":"exact"},{"name":"Sturge-Weber-Dimitri syndrome","type":"exact"},{"name":"Sturge-Weber-Krabbe angiomatosis","type":"exact"},{"name":"Sturge-Weber-Krabbe syndrome","type":"exact"},{"name":"encephalofacial angiomatosis","type":"exact"},{"name":"encephalotrigeminal angiomatosis","type":"exact"},{"name":"encephalotrigeminal syndrome","type":"exact"},{"name":"fourth phacomatosis","type":"related"},{"name":"leptomeningeal angiomatosis","type":"related"},{"name":"meningeal capillary angiomatosis","type":"related"}],"termid":"MONDO:0008501","xrefs":{"Monarch":{"xref_id":"0008501"}}}


id: GO:0052835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4,6-trisphosphate + ATP = 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ADP + H+.","definition_xrefs":["PMID:11909533","RHEA:70287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"inositol-3,4,6-trisphosphate 1-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855169","MetaCyc:RXN-10984"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 1-kinase activity","type":"broad"},{"name":"IP3 1-kinase activity","type":"broad"},{"name":"Ins(3,4,6)P3 1-kinase activity","type":"related"},{"name":"inositol 3,4,6-trisphosphate 1-kinase activity","type":"exact"},{"name":"inositol-trisphosphate 1-kinase activity","type":"broad"},{"name":"ins(3,4,6)P(3) 1-kinase activity","type":"related"}],"termid":"GO:0052835"}


id: GO:0046520
data:
  {"annotated_genes":["SJAG_01057","SJAG_02429","SJAG_02305","SJAG_04178","SJAG_02706","SJAG_00880"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98774,78624,107915,75454,111667,80704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingoids, any of a class of compounds comprising sphinganine and its homologues and stereoisomers, and derivatives of these compounds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingoid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sphingoid anabolism","type":"exact"},{"name":"sphingoid biosynthesis","type":"exact"},{"name":"sphingoid formation","type":"exact"},{"name":"sphingoid synthesis","type":"exact"}],"termid":"GO:0046520","terms_by_termid":{"GO:0046512":null}}


id: PBO:0066988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 291","termid":"PBO:0066988"}


id: PBO:0048690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIPR1 like 2","termid":"PBO:0048690"}


id: MONDO:0000096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pulmonary surfactant metabolism dysfunction (obsolete MONDO:0000096)","synonyms":[{"name":"SMDP","type":"related"}],"termid":"MONDO:0000096","xrefs":{"Monarch":{"xref_id":"0000096"}}}


id: GO:1904553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemotaxis to arachidonic acid.","definition_xrefs":["GO_REF:0000058","PMID:16382163","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of chemotaxis to arachidonate","termid":"GO:1904552"},{"relation_name":"negatively_regulates","term_name":"chemotaxis to arachidonate","termid":"GO:0034670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemotaxis to arachidonate","synonyms":[{"name":"down regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"down-regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"downregulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"inhibition of chemotaxis to arachidonic acid","type":"narrow"},{"name":"negative regulation of chemotaxis to arachidonic acid","type":"exact"}],"termid":"GO:1904553"}


id: MONDO:0005545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process in which the bacteria Staphylococcus aureus is present.","definition_xrefs":["NCIT:C122576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"staphylococcal infection","termid":"MONDO:0024313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcus aureus infection","secondary_identifiers":["EFO:0005681","UMLS:C1318973","MEDGEN:232934","SCTID:406602003"],"termid":"MONDO:0005545","xrefs":{"Monarch":{"xref_id":"0005545"}}}


id: GO:0010424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 or N-4 of a cytosine located within a CG sequence in a DNA molecule.","definition_xrefs":["GOC:tb","GOC:dph","PMID:17239600"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation on cytosine within a CG sequence (obsolete GO:0010424)","synonyms":[{"name":"cytosine methylation within a CG sequence","type":"exact"}],"termid":"GO:0010424"}


id: GO:0045826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of intermediate filament polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of intermediate filament polymerization and/or depolymerization (obsolete GO:0045826)","synonyms":[{"name":"positive regulation of intermediate filament polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045826"}


id: GO:0019789
data:
  {"annotated_genes":["SJAG_00604","SJAG_02082","SJAG_01776","SJAG_03175","SJAG_00727"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77444,106391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061656"},{"annotations":[106268,74253,74272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061665"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of SUMO from one protein to another via the reaction X-SUMO + Y = Y-SUMO + X, where both X-SUMO and Y-SUMO are covalent linkages.","definition_xrefs":["PMID:11031248","GOC:rn","PMID:11265250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00727":null,"SJAG_01776":null,"SJAG_02082":null,"SJAG_03175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0140096","GO:0019787","GO:0016740"],"is_obsolete":false,"name":"SUMO transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-4551616","Reactome:R-HSA-3000348","Reactome:R-HSA-5228523","Reactome:R-HSA-4085350","GO:0019949","Reactome:R-HSA-4719413","Reactome:R-HSA-5682607","Reactome:R-HSA-4755479","Reactome:R-HSA-6790454","Reactome:R-HSA-3234084","Reactome:R-HSA-3927824","Reactome:R-HSA-4717461","Reactome:R-HSA-4086083","Reactome:R-HSA-4570489","Reactome:R-HSA-4720432","Reactome:R-HSA-3000383","Reactome:R-HSA-4090408","Reactome:R-HSA-4551768","Reactome:R-HSA-4615839","Reactome:R-HSA-3900047","Reactome:R-HSA-4551738","Reactome:R-HSA-3903017","Reactome:R-HSA-3000399","Reactome:R-HSA-4655374","Reactome:R-HSA-3900177","Reactome:R-HSA-4090390","Reactome:R-HSA-4568863","Reactome:R-HSA-4570553","Reactome:R-HSA-2997723","Reactome:R-HSA-4641362","Reactome:R-HSA-3899291","Reactome:R-HSA-4570499","Reactome:R-HSA-4341048","Reactome:R-HSA-4085992","Reactome:R-HSA-3247493","Reactome:R-HSA-4085994","Reactome:R-HSA-4570528","Reactome:R-HSA-4570554","Reactome:R-HSA-3108203","Reactome:R-HSA-4546387","Reactome:R-HSA-4719424","Reactome:R-HSA-3927959","Reactome:R-HSA-4615873","Reactome:R-HSA-4615933","Reactome:R-HSA-4551649","Reactome:R-HSA-4615987","Reactome:R-HSA-4568914","Reactome:R-HSA-4717521","Reactome:R-HSA-4641350","Reactome:R-HSA-8956365","Reactome:R-HSA-4719436","Reactome:R-HSA-4341073","Reactome:R-HSA-3000434","Reactome:R-HSA-4615872","Reactome:R-HSA-4341070","Reactome:R-HSA-4655431","Reactome:R-HSA-4755494","Reactome:R-HSA-3927886","Reactome:R-HSA-4655440","Reactome:R-HSA-4090288","Reactome:R-HSA-5228525","Reactome:R-HSA-4719423","Reactome:R-HSA-4755526","Reactome:R-HSA-5228521","Reactome:R-HSA-6804468","Reactome:R-HSA-3900070","Reactome:R-HSA-3108209","Reactome:R-HSA-4341072","Reactome:R-HSA-4570467","Reactome:R-HSA-4085331","Reactome:R-HSA-4086059","Reactome:R-HSA-4085372","Reactome:R-HSA-3232162","Reactome:R-HSA-4546386","Reactome:R-HSA-4719447","Reactome:R-HSA-4090284","Reactome:R-HSA-4551604","Reactome:R-HSA-5684052","Reactome:R-HSA-2993790","Reactome:R-HSA-3234094","Reactome:R-HSA-4551679","Reactome:R-HSA-3296126","Reactome:R-HSA-4570463","Reactome:R-HSA-4570496","Reactome:R-HSA-4615900","Reactome:R-HSA-4570485","Reactome:R-HSA-4641345","Reactome:R-HSA-6804485","Reactome:R-HSA-2993780","Reactome:R-HSA-4719448","Reactome:R-HSA-5228508","Reactome:R-HSA-4551727","Reactome:R-HSA-4341025","Reactome:R-HSA-4551661","Reactome:R-HSA-4085296","Reactome:R-HSA-4568848","Reactome:R-HSA-4570493","Reactome:R-HSA-2997706","Reactome:R-HSA-3000411","Reactome:R-HSA-3968414","Reactome:R-HSA-4615889","Reactome:R-HSA-4615905","Reactome:R-HSA-4568846","Reactome:R-HSA-4551724","Reactome:R-HSA-4551655","Reactome:R-HSA-4341016","GO:0016930","Reactome:R-HSA-3782535","Reactome:R-HSA-3000433","Reactome:R-HSA-3900194","Reactome:R-HSA-4615910","Reactome:R-HSA-4551683","Reactome:R-HSA-4655355","Reactome:R-HSA-2997616","Reactome:R-HSA-3234081","Reactome:R-HSA-4086088","Reactome:R-HSA-4656914","Reactome:R-HSA-4755411","Reactome:R-HSA-4641342","Reactome:R-HSA-3968362","Reactome:R-HSA-4086036","Reactome:R-HSA-3108212","Reactome:R-HSA-4755478","Reactome:R-HSA-4755536","Reactome:R-HSA-4085318","Reactome:R-HSA-4090281","Reactome:R-HSA-3000449","Reactome:R-HSA-2993769","Reactome:R-HSA-4085347","Reactome:R-HSA-4546385","Reactome:R-HSA-4720446","Reactome:R-HSA-4551648","Reactome:R-HSA-4616015","Reactome:R-HSA-2997709","Reactome:R-HSA-4551721","Reactome:R-HSA-3465545"],"synonyms":[{"name":"SMT3 conjugating enzyme","type":"related"},{"name":"SUMO conjugating enzyme activity","type":"related"}],"termid":"GO:0019789","terms_by_termid":{"GO:0061656":null,"GO:0061665":null}}


id: PBO:0006222
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predominantly single copy (one to one)","termid":"PBO:0006222"}


id: MONDO:0019253
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044330"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of biogenic amine metabolism and transport","termid":"MONDO:0019250"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"metabolic disease involving other neurotransmitter deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18979","UMLS:C5681275","icd11.foundation:946446904","MEDGEN:1843271","Orphanet:79219"],"termid":"MONDO:0019253","terms_by_termid":{"MONDO:0044330":null},"xrefs":{"Monarch":{"xref_id":"0019253"}}}


id: MONDO:0015185
data:
  {"annotated_genes":["SJAG_01419","SJAG_02261","SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012041"},{"annotations":[87051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014630"},{"annotations":[88938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044300"}]},"cv_name":"mondo","definition":"A syndrome associated with the development of multiple polyps throughout the intestine. It includes familial adenomatous polyposis , hamartomatous polyposis syndromes, and other rare polyposis syndromes.","definition_xrefs":["NCIT:C155954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"is_obsolete":false,"name":"intestinal polyposis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:577190","SCTID:254589009","MedDRA:10057018","Orphanet:104010","UMLS:C0345891","GARD:19847"],"termid":"MONDO:0015185","terms_by_termid":{"MONDO:0012041":null,"MONDO:0014630":null,"MONDO:0044300":null},"xrefs":{"Monarch":{"xref_id":"0015185"}}}


id: PBO:0088939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS complex subunit, involved in phosphoinositide metabolism Vac14","termid":"PBO:0088939"}


id: PBO:0058324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4697","termid":"PBO:0058324"}


id: GO:1903577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-arginine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:6394628","GO_REF:0000071","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to L-arginine","termid":"GO:1903576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-arginine","termid":"GO:1903577"}


id: PBO:0048637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 6, pseudogene","termid":"PBO:0048637"}


id: PBO:0016929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Aip1","termid":"PBO:0016929"}


id: PBO:0062936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 2","termid":"PBO:0062936"}


id: PBO:0078154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 32 (pseudogene)","termid":"PBO:0078154"}


id: PBO:0076933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 1","termid":"PBO:0076933"}


id: PBO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLEYA domain","termid":"PBO:0000092"}


id: PBO:0067026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 39, pseudogene","termid":"PBO:0067026"}


id: MONDO:1010262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, non-human animal","secondary_identifiers":["OMIA:000807"],"termid":"MONDO:1010262","xrefs":{"Monarch":{"xref_id":"1010262"}}}


id: PR:Q9P7I9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane emp24 domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04512","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal protein P24B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.17","secondary_identifiers":["UniProtKB:Q9P7I9"],"synonyms":[{"name":"Spom972h-TMED2","type":"exact"}],"termid":"PR:Q9P7I9"}


id: GO:0010905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of UDP-glucose catabolism. UDP-glucose catabolic processes are the chemical reactions and pathways resulting in the breakdown of UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of UDP-glucose catabolic process","termid":"GO:0010904"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"UDP-alpha-D-glucose catabolic process","termid":"GO:0006258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"negative regulation of UDP-glucose catabolic process","synonyms":[{"name":"negative regulation of UDP-glucose catabolism","type":"exact"}],"termid":"GO:0010905"}


id: PBO:0066595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member J","termid":"PBO:0066595"}


id: MONDO:0003310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of arteriosclerosis in which calcification of the tunica media is the predominant feature.","definition_xrefs":["NCIT:C35770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriosclerosis disorder","termid":"MONDO:0002277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monckeberg arteriosclerosis","secondary_identifiers":["DOID:5161","MEDGEN:165784","UMLS:C0887866"],"synonyms":[{"name":"Mönckeberg arteriosclerosis","type":"exact"}],"termid":"MONDO:0003310","xrefs":{"Monarch":{"xref_id":"0003310"}}}


id: MONDO:0021339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the hard palate.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hard palate cancer","termid":"MONDO:0004719"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of hard palate","secondary_identifiers":["UMLS:C0345550","SCTID:254434008","NCIT:C8394","MEDGEN:138019"],"synonyms":[{"name":"carcinoma of hard palate","type":"exact"},{"name":"carcinoma of the hard palate","type":"exact"},{"name":"hard palate carcinoma","type":"exact"}],"termid":"MONDO:0021339","xrefs":{"Monarch":{"xref_id":"0021339"}}}


id: MONDO:0000767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nut midline carcinoma (obsolete MONDO:0000767)","termid":"MONDO:0000767","xrefs":{"Monarch":{"xref_id":"0000767"}}}


id: SO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature where there has been exchange of genetic material in the event of mitosis or meiosis","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_feature","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"recombination feature","type":"exact"}],"termid":"SO:0000298"}


id: PBO:0064230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C eta 1","termid":"PBO:0064230"}


id: PBO:0056892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midline 2","termid":"PBO:0056892"}


id: PBO:0056270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1A member 1","termid":"PBO:0056270"}


id: GO:0004716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer, downstream of receptor, with protein tyrosine kinase activity (obsolete GO:0004716)","synonyms":[{"name":"receptor signaling protein tyrosine kinase activity","type":"exact"},{"name":"receptor signalling protein tyrosine kinase activity","type":"exact"}],"termid":"GO:0004716"}


id: PBO:0017481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_downstream_of_or_within","termid":"PBO:0017481"}


id: PBO:0082579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cholinephosphate cytidylyltransferase; a rate-determining enzyme of the CDP-choline pathway for phosphatidylcholine synthesis, inhibited by Sec14p, activated upon lipid-binding; controls phosphatidylcholine homeostasis; contains an element within the regulatory domain involved in both silencing and activation of enzymatic activity","termid":"PBO:0082579"}


id: FYPO:0005514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the vacuole is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to vacuole","synonyms":[{"name":"ectopic protein localization to vacuole","type":"exact"},{"name":"protein mislocalised to vacuole","type":"exact"},{"name":"protein mislocalised to vacuole during vegetative growth","type":"exact"},{"name":"protein mislocalized to vacuole during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0005514"}


id: MONDO:0010768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mixed germ cell/sex cord-stromal tumor characterized by the presence of large germ cells which resemble seminoma cells and small cells which resemble Sertoli or granulosa cells. It occurs in the testis and the ovary and is identified in children and adults. It is often associated with gonadal dysgenesis and abnormal karyotype.","definition_xrefs":["NCIT:C3754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"gonadal disorder","termid":"MONDO:0002259"},{"relation_name":"is_a","term_name":"mixed germ cell-sex cord-stromal tumor","termid":"MONDO:0002478"},{"relation_name":"is_a","term_name":"blastoma","termid":"MONDO:0005565"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"},{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gonadoblastoma","secondary_identifiers":["ONCOTREE:OGBL","MEDGEN:104912","ICDO:9073/1","DOID:3301","MESH:D018238","UMLS:C0206661"],"synonyms":[{"name":"gonad blastoma","type":"exact"},{"name":"gonadoblastoma","type":"exact"}],"termid":"MONDO:0010768","xrefs":{"Monarch":{"xref_id":"0010768"}}}


id: GO:0004534
data:
  {"annotated_genes":["SJAG_02275","SJAG_03276","SJAG_04587"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71728,75254,79678],"is_not":false,"summary":null,"term":"GO:0004534"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of an RNA molecule.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-3' exonuclease activity","termid":"GO:0008409"},{"relation_name":"is_a","term_name":"RNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016896"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02275":null,"SJAG_03276":null,"SJAG_04587":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0016788","GO:0004527","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"5'-3' RNA exonuclease activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-429845"],"synonyms":[{"name":"5'-3' exoribonuclease activity","type":"exact"}],"termid":"GO:0004534","terms_by_termid":{"GO:0004534":null}}


id: GO:0042911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of acridine (10-azaanthracene), a heterocyclic ring compound found in crude coal-tar anthracene from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acridine transmembrane transporter activity (obsolete GO:0042911)","synonyms":[{"name":"acridine transporter activity","type":"related"}],"termid":"GO:0042911"}


id: PBO:0043792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylation element binding protein 3","termid":"PBO:0043792"}


id: PBO:0076455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 2 pseudogene 1","termid":"PBO:0076455"}


id: PBO:0047052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM111 trypsin like peptidase B","termid":"PBO:0047052"}


id: PATO:0001117
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001117 absolute impulse value (obsolete PATO:0001117)","termid":"PATO:0001117"}


id: PBO:0057712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1298","termid":"PBO:0057712"}


id: PBO:0078996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trRNA-Thr (anticodon AGT) 3-1","termid":"PBO:0078996"}


id: GO:0007074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis, from RNA polymerase II promoter (obsolete GO:0007074)","synonyms":[{"name":"activation of transcription on exit from mitosis, from Pol II promoter","type":"narrow"},{"name":"activation of transcription on exit from mitosis, from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0007074"}


id: GO:0031643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation of a myelin sheath around nerve axons.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myelination","termid":"GO:0031641"},{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myelination","synonyms":[{"name":"activation of myelination","type":"narrow"},{"name":"stimulation of myelination","type":"narrow"},{"name":"up regulation of myelination","type":"exact"},{"name":"up-regulation of myelination","type":"exact"},{"name":"upregulation of myelination","type":"exact"}],"termid":"GO:0031643"}


id: GO:0005066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane receptor protein tyrosine kinase signaling protein activity (obsolete GO:0005066)","synonyms":[{"name":"transmembrane receptor protein tyrosine kinase signaling protein activity","type":"exact"},{"name":"transmembrane receptor protein tyrosine kinase signalling protein activity","type":"exact"}],"termid":"GO:0005066"}


id: MONDO:0020385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dextro-looped transposition of the great arteries","termid":"MONDO:0019443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenitally uncorrected transposition of the great arteries with coarctation","secondary_identifiers":["NANDO:1200703","GARD:19614","Orphanet:99042","MEDGEN:1842891","UMLS:C5680321"],"synonyms":[{"name":"TGA with coarctation","type":"exact"},{"name":"congenitally uncorrected transposition of the great vessels with coarctation","type":"exact"}],"termid":"MONDO:0020385","xrefs":{"Monarch":{"xref_id":"0020385"}}}


id: GO:0090603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby a relatively unspecialized cell acquires specialized features of a sieve element.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sieve element differentiation","termid":"GO:0090603"}


id: GO:0060661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a submandibular salivary gland. This process begins with a thickening of the epithelium next to the tongue and ends when a bud linked to the oral surface is formed.","definition_xrefs":["GOC:dph","PMID:17336109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"submandibular salivary gland formation","termid":"GO:0060661"}


id: PBO:0017928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter Pet2","termid":"PBO:0017928"}


id: PR:O74946
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase alpha subunit B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04254","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.09c","secondary_identifiers":["UniProtKB:O74946"],"synonyms":[{"name":"Spom972h-POLA2","type":"exact"}],"termid":"PR:O74946"}


id: SO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A part of a primary transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"},{"relation_name":"part_of","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary_transcript_region","synonyms":[{"name":"primary transcript region","type":"exact"}],"termid":"SO:0000835"}


id: PBO:0004449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pho85 family (predicted)","termid":"PBO:0004449"}


id: MONDO:0009166
data:
  {"annotated_genes":["SJAG_00754"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87366],"is_not":false,"summary":null,"term":"MONDO:0009166"}]},"cv_name":"mondo","definition":"Pontocerebellar hypoplasia type 4 (PCH4) is a very rare form of PCH, characterized by prenatal onset of polyhydramnios and contractures followed by hypertonia, severe clonus, primary hypoventilation leading to an early postnatal death.","definition_xrefs":["Orphanet:166063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:384027","icd11.foundation:447667859","SCTID:718608006","UMLS:C1856974","GARD:343","OMIM:225753","DOID:0060273","MESH:C536716"],"synonyms":[{"name":"PCH4","type":"exact"},{"name":"encephalopathy fatal infantile with olivopontocerebellar hypoplasia","type":"related"},{"name":"encephalopathy, fatal infantile, with olivopontocerebellar Hypoplasia","type":"related"},{"name":"fatal infantile encephalopathy with olivopontocerebellar hypoplasia","type":"exact"},{"name":"olivopontocerebellar hypoplasia","type":"exact"},{"name":"pontocerebellar hypoplasia, type 4","type":"related"}],"termid":"MONDO:0009166","terms_by_termid":{"MONDO:0009166":null},"xrefs":{"Monarch":{"xref_id":"0009166"}}}


id: MONDO:0017495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital absence of upper arm and forearm with hand present, bilateral (obsolete MONDO:0017495)","secondary_identifiers":["ICD10CM:Q71.13","Orphanet:295087"],"synonyms":[{"name":"humero-radio-ulnar intercalary transverse meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017495","xrefs":{"Monarch":{"xref_id":"0017495"}}}


id: PBO:0084437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Malate synthase, enzyme of the glyoxylate cycle; involved in utilization of non-fermentable carbon sources; expression is subject to carbon catabolite repression; localizes in peroxisomes during growth on oleic acid, otherwise cytosolic; can accept butyryl-CoA as acyl-CoA donor in addition to traditional substrate acetyl-CoA","termid":"PBO:0084437"}


id: FYECO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in YES containing yeast extract and other components, but without glucose. The concentration of glucose is very low (eg around 0.1%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no glucose YES","termid":"FYECO:0000422"}


id: PBO:0058999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated A","termid":"PBO:0058999"}


id: PBO:0084283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for efficient mating; may participate in or regulate the low affinity Ca2+ influx system, which affects intracellular signaling and cell-cell fusion during mating","termid":"PBO:0084283"}


id: MOD:01156
data:
  {"annotated_genes":["SJAG_04238","SJAG_02435","SJAG_04789","SJAG_02388","SJAG_00331","SJAG_03641","SJAG_02763","SJAG_02522","SJAG_01488","SJAG_02472","SJAG_01626","SJAG_00464","SJAG_02694","SJAG_04972","SJAG_02498","SJAG_03009","SJAG_00318","SJAG_03290","SJAG_04953","SJAG_01587","SJAG_01029","SJAG_00254","SJAG_04819","SJAG_00109","SJAG_02183","SJAG_03012","SJAG_03032","SJAG_04553","SJAG_02489","SJAG_00096","SJAG_00733","SJAG_02592","SJAG_04551","SJAG_02260","SJAG_01671","SJAG_00784","SJAG_02504","SJAG_04125","SJAG_02766","SJAG_01970","SJAG_00288","SJAG_04067","SJAG_01162","SJAG_02827"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00226"},{"annotations":[82371,82485,82507,82543,82567,82541,82285,82334,82290,82284,82504,82275,82572,82568,82438,82331,82380,82426,82506,82372,82493,82282,82363,82462,82463,82280,82357,82341,82461,82289,82291,82425,82255,82336,82427,82379,82446,82505,82335,82539,82542,82544,82566,82574,82281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00689"},{"annotations":[82317,82473,82414,82484,82548,82398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00042"},{"annotations":[82439,82262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"},{"annotations":[82497,82327,82517,82496,82323,82326,82328,82495,82498,82325,82324,82518,82519,82520,82521,82494,82522,82329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00006"},{"annotations":[82393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00126"},{"annotations":[82444,82392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00123"},{"annotations":[82460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00127"},{"annotations":[121451,82278,121452,121453,121454,121573,82279,121574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[82537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00159"},{"annotations":[121131,121137,121443,121138,121139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00696"}]},"cv_name":"PSI-MOD","definition":"Modified amino acid residue derived from a natural amino acid by a real or hypothetical chemical process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification","termid":"MOD:00000"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00288":null,"SJAG_00318":null,"SJAG_00331":null,"SJAG_00464":null,"SJAG_00733":null,"SJAG_00784":null,"SJAG_01029":null,"SJAG_01162":null,"SJAG_01488":null,"SJAG_01587":null,"SJAG_01626":null,"SJAG_01671":null,"SJAG_01970":null,"SJAG_02183":null,"SJAG_02260":null,"SJAG_02388":null,"SJAG_02435":null,"SJAG_02472":null,"SJAG_02489":null,"SJAG_02498":null,"SJAG_02504":null,"SJAG_02522":null,"SJAG_02592":null,"SJAG_02694":null,"SJAG_02763":null,"SJAG_02766":null,"SJAG_02827":null,"SJAG_03009":null,"SJAG_03012":null,"SJAG_03032":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_04067":null,"SJAG_04125":null,"SJAG_04238":null,"SJAG_04551":null,"SJAG_04553":null,"SJAG_04789":null,"SJAG_04819":null,"SJAG_04953":null,"SJAG_04972":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification categorized by chemical process","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:36408920":null},"termid":"MOD:01156","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0036460":null,"GO:0042149":null,"GO:0071475":null,"GO:0120306":null,"GO:1904547":null,"MOD:00006":null,"MOD:00042":null,"MOD:00046":null,"MOD:00050":null,"MOD:00123":null,"MOD:00126":null,"MOD:00127":null,"MOD:00159":null,"MOD:00226":null,"MOD:00689":null,"MOD:00696":null}}


id: PBO:0062731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 5 pseudogene","termid":"PBO:0062731"}


id: PR:O74327
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- avt5 gene.","definition_xrefs":["UniProtKB:O74327","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transporter 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.07c","synonyms":[{"name":"Spom972h-avt5","type":"exact"}],"termid":"PR:O74327"}


id: PBO:0048030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 1 pseudogene 1","termid":"PBO:0048030"}


id: GO:0031074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any complex that acts to move proteins or RNAs into or out of the nucleus through nuclear pores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nucleocytoplasmic transport complex","synonyms":[{"name":"nucleocytoplasmic shuttling complex","type":"narrow"}],"termid":"GO:0031074"}


id: PBO:0086086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase of the ER membrane; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; involved in ER quality control; functions as a heterodimer with Pmt2p but can also pair with Pmt5p; antifungal drug target; PMT2 has a paralog, PMT3, that arose from the whole genome duplication","termid":"PBO:0086086"}


id: PBO:0038378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_epiphyte","termid":"PBO:0038378"}


id: PBO:0053004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit gamma 3","termid":"PBO:0053004"}


id: FYPO:0006744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to tschimganine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to tschimganine","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to tschimganine","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to TMN","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to tschimganine during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to tschimganine during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to tschimganine","type":"exact"}],"termid":"FYPO:0006744"}


id: PBO:0027326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_surface_pyruvylated_galactose_level","termid":"PBO:0027326"}


id: PR:O74863
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit trm82 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.13","synonyms":[{"name":"Spom972h-SPCC18.13","type":"exact"},{"name":"transfer RNA methyltransferase 82 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74863"}


id: GO:1900236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Kit signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of Kit signaling pathway","termid":"GO:1900234"},{"relation_name":"positively_regulates","term_name":"Kit signaling pathway","termid":"GO:0038109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Kit signaling pathway","synonyms":[{"name":"activation of Kit signaling pathway","type":"narrow"},{"name":"activation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"activation of stem cell factor signaling pathway","type":"exact"},{"name":"positive regulation of Kit signalling pathway","type":"exact"},{"name":"positive regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"positive regulation of stem cell factor signaling pathway","type":"exact"},{"name":"up regulation of Kit signaling pathway","type":"exact"},{"name":"up regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"up regulation of stem cell factor signaling pathway","type":"exact"},{"name":"up-regulation of Kit signaling pathway","type":"exact"},{"name":"up-regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of stem cell factor signaling pathway","type":"exact"},{"name":"upregulation of Kit signaling pathway","type":"exact"},{"name":"upregulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"upregulation of stem cell factor signaling pathway","type":"exact"}],"termid":"GO:1900236"}


id: PBO:0004148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid uptake transporter Fnx2","termid":"PBO:0004148"}


id: PR:Q9US15
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC607.02c gene.","definition_xrefs":["UniProtKB:Q9US15","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0653 protein C607.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.02c","synonyms":[{"name":"Spom972h-SPAC607.02c","type":"exact"}],"termid":"PR:Q9US15"}


id: PBO:0057850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3161","termid":"PBO:0057850"}


id: FYECO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glucose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glucose","termid":"FYECO:0000181"}


id: PBO:0070799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 29","termid":"PBO:0070799"}


id: PBO:0000466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga8","termid":"PBO:0000466"}


id: MONDO:0016179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired amyloid peripheral neuropathy (obsolete MONDO:0016179)","secondary_identifiers":["Orphanet:209013"],"termid":"MONDO:0016179","xrefs":{"Monarch":{"xref_id":"0016179"}}}


id: PBO:0088651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn8","termid":"PBO:0088651"}


id: PBO:0000736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin family","termid":"PBO:0000736"}


id: PR:Q69Z14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q69Z14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit e (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.16","synonyms":[{"name":"Spom972h-vma9","type":"exact"},{"name":"V-ATPase subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q69Z14"}


id: MONDO:0019331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare form of salmonellosis (obsolete MONDO:0019331)","termid":"MONDO:0019331","xrefs":{"Monarch":{"xref_id":"0019331"}}}


id: MONDO:0002144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperuricemia (obsolete MONDO:0002144)","secondary_identifiers":["ICD9:790.6","DOID:1920","MESH:D033461","SCTID:35885006"],"synonyms":[{"name":"blood urate raized","type":"exact"},{"name":"hyperuricemia","type":"exact"},{"name":"obsolete hyperuricemia (disease)","type":"exact"},{"name":"uricacidemia","type":"exact"}],"termid":"MONDO:0002144","xrefs":{"Monarch":{"xref_id":"0002144"}}}


id: MONDO:0007233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital defect in the neck that occurs during early embryonic development. It is caused by developmental abnormalities of the pharyngeal arches and results in the development of a cyst or a fissure in the side of the neck.","definition_xrefs":["NCIT:C104813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"second branchial cleft anomaly","secondary_identifiers":["MEDGEN:840602","OMIM:113600","Orphanet:141022","SCTID:73381000119100","UMLS:C3874315","GARD:16968"],"synonyms":[{"name":"branchial cleft","type":"exact"},{"name":"branchial cleft anomalies","type":"related"},{"name":"branchial cleft remnant","type":"exact"},{"name":"branchial cysts","type":"related"},{"name":"second branchial cleft cyst","type":"exact"},{"name":"second branchial cleft fistula","type":"exact"}],"termid":"MONDO:0007233","xrefs":{"Monarch":{"xref_id":"0007233"}}}


id: MONDO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alcohol-related neurodevelopmental disorder (obsolete MONDO:0000394)","termid":"MONDO:0000394","xrefs":{"Monarch":{"xref_id":"0000394"}}}


id: PBO:0061998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 1 pseudogene","termid":"PBO:0061998"}


id: GO:0016233
data:
  {"annotated_genes":["SJAG_03685","SJAG_01864","SJAG_02194","SJAG_01378","SJAG_02362","SJAG_04245","SJAG_01777","SJAG_03092"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64219,78821,93676,101603,112325,117927],"is_not":false,"summary":null,"term":"GO:0016233"},{"annotations":[81649,91590],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031848"}]},"cv_name":"biological_process","definition":"A process in which telomeres are protected from degradation and fusion, thereby ensuring chromosome stability by protecting the ends from both degradation and from being recognized as damaged DNA. May be mediated by specific single- or double-stranded telomeric DNA binding proteins.","definition_xrefs":["GOC:rn","GOC:mah","PMID:11349150","PMID:11352055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01378":null,"SJAG_01777":null,"SJAG_01864":null,"SJAG_02194":null,"SJAG_02362":null,"SJAG_03092":null,"SJAG_03685":null,"SJAG_04245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"telomere capping","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"telomere end protection","type":"exact"}],"termid":"GO:0016233","terms_by_termid":{"GO:0016233":null,"GO:0031848":null}}


id: MONDO:0021299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the extrahepatic bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct carcinoma in situ","termid":"MONDO:0000374"},{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma in situ of extrahepatic bile duct","secondary_identifiers":["SCTID:92589000","NCIT:C4442","MEDGEN:138028","UMLS:C0345914"],"synonyms":[{"name":"carcinoma in situ of extrahepatic bile duct","type":"exact"},{"name":"carcinoma in situ of extrahepatic bile ducts","type":"exact"},{"name":"carcinoma in situ of extrahepatic biliary ducts","type":"exact"},{"name":"carcinoma in situ of the extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct cancer stage 0","type":"exact"},{"name":"extrahepatic bile duct carcinoma in situ","type":"exact"},{"name":"extrahepatic bile duct in situ carcinoma","type":"exact"},{"name":"extrahepatic biliary duct carcinoma in situ","type":"exact"},{"name":"stage 0 carcinoma of extrahepatic bile duct","type":"exact"},{"name":"stage 0 carcinoma of the extrahepatic bile duct","type":"exact"},{"name":"stage 0 extrahepatic bile duct cancer","type":"exact"},{"name":"stage 0 extrahepatic bile duct carcinoma","type":"exact"},{"name":"stage 0 extrahepatic bile duct carcinoma in situ","type":"exact"}],"termid":"MONDO:0021299","xrefs":{"Monarch":{"xref_id":"0021299"}}}


id: PBO:0076584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D8 antisense RNA 1","termid":"PBO:0076584"}


id: PBO:0049707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan synthase 2","termid":"PBO:0049707"}


id: PBO:0028724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cell_tip","termid":"PBO:0028724"}


id: PBO:0041391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 60","termid":"PBO:0041391"}


id: MONDO:0035466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nephrotic syndrome without extrarenal manifestations (obsolete MONDO:0035466)","secondary_identifiers":["Orphanet:567564"],"termid":"MONDO:0035466","xrefs":{"Monarch":{"xref_id":"0035466"}}}


id: GO:0042652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The peripheral segment of respiratory chain complex I located in the mitochondrion. Respiratory chain complex I is an enzyme of the respiratory chain, consisting of at least 34 polypeptide chains. The electrons of NADH enter the chain at this complex. The complete complex is L-shaped, with a horizontal arm lying in the membrane and a vertical arm that projects into the matrix.","definition_xrefs":["ISBN:0716749556","GOC:jid","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex I, peripheral segment (obsolete GO:0042652)","synonyms":[{"name":"NADH dehydrogenase (ubiquinone) complex, peripheral segment","type":"broad"},{"name":"NADH-Q oxidoreductase complex, peripheral segment","type":"broad"}],"termid":"GO:0042652"}


id: PBO:0034114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_III_bouton","termid":"PBO:0034114"}


id: PBO:0066396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor accessory protein 6","termid":"PBO:0066396"}


id: PBO:0085414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane sulfite pump involved in sulfite metabolism; required for efficient sulfite efflux; major facilitator superfamily protein","termid":"PBO:0085414"}


id: MONDO:0015270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Butyrylcholinesterase (BChE) deficiency is a metabolic disorder characterized by prolonged apnoea after the use of certain anesthetic drugs, including the muscle relaxants succinylcholine or mivacurium and other ester local anesthetics. The duration of the prolonged apnoea varies significantly depending on the extent of the enzyme deficiency.","definition_xrefs":["Orphanet:132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease involving other neurotransmitter deficiency","termid":"MONDO:0019253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"butyrylcholinesterase deficiency","secondary_identifiers":["SCTID:191397007","UMLS:C1283400","MEDGEN:220923","icd11.foundation:581237559","ICD9:289.89","MESH:C537417","OMIM:617936","GARD:7482"],"synonyms":[{"name":"Acholinesterasemia","type":"related"},{"name":"BCHED","type":"related"},{"name":"Suxamethonium sensitivity","type":"related"},{"name":"apnea, postanesthetic","type":"related"},{"name":"apnea, postanesthetic, susceptibility to, due to BCHE deficiency","type":"exact"},{"name":"butyrylcholinesterase deficiency","type":"exact"},{"name":"butyrylcholinesterase deficiency, fluoride-resistant, Japanese type","type":"related"},{"name":"cholinesterase 2 deficiency","type":"related"},{"name":"hypocholinesterasemia, fluoride-resistant, Japanese type","type":"related"},{"name":"pseudocholinesterase E1","type":"related"},{"name":"pseudocholinesterase deficiency","type":"related"},{"name":"succinylcholine sensitivity","type":"related"}],"termid":"MONDO:0015270","xrefs":{"Monarch":{"xref_id":"0015270"}}}


id: PBO:0078144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 23/delta variable 6","termid":"PBO:0078144"}


id: PBO:0017474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-during_which_ends","termid":"PBO:0017474"}


id: GO:0047860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(3,5-diiodo-4-hydroxyphenyl)lactate + NAD+ = 3-(3,5-diiodo-4-hydroxyphenyl)pyruvate + H+ + NADH.","definition_xrefs":["RHEA:20293","EC:1.1.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diiodophenylpyruvate reductase activity","secondary_identifiers":["MetaCyc:DIIODOPHENYLPYRUVATE-REDUCTASE-RXN","KEGG_REACTION:R03431"],"synonyms":[{"name":"2-oxo acid reductase activity","type":"related"},{"name":"3-(3,5-diiodo-4-hydroxyphenyl)lactate:NAD+ oxidoreductase activity","type":"related"},{"name":"KAR","type":"related"},{"name":"aromatic alpha-keto acid","type":"related"}],"termid":"GO:0047860"}


id: GO:0061987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving glucose that decreases the frequency, rate or extent or transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:11875061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by glucose","termid":"GO:0000430"},{"relation_name":"is_a","term_name":"negative regulation of transcription by glucose","termid":"GO:0061986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription from RNA polymerase II promoter by glucose","termid":"GO:0061987"}


id: PBO:0113189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity vacuolar phosphate transporter; exports phosphate from vacuolar lumen to cytosol; regulates phosphate and polyphosphate metabolism; acts upstream of Pho81p in regulation of PHO pathway; localizes to sites of contact between vacuole and mitochondria (vCLAMPs); targeted to vacuole via AP-3 pathway; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth","termid":"PBO:0113189"}


id: MONDO:0006290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gonadal or extragonadal malignant neoplasm that arises from germ cells. Representative examples include embryonal carcinoma, yolk sac tumor, and seminoma.","definition_xrefs":["NCIT:C4925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant germ cell tumor","secondary_identifiers":["UMLS:C4048549","MEDGEN:890580","EFO:1000352","GARD:3360","SCTID:145831000119103"],"synonyms":[{"name":"cancer of germ cell","type":"exact"},{"name":"germ cell cancer","type":"exact"},{"name":"germ cell tumor, malignant","type":"exact"},{"name":"malignant germ cell neoplasm","type":"exact"},{"name":"malignant germ cell tumor","type":"exact"},{"name":"malignant neoplasm of germ cell","type":"exact"},{"name":"malignant neoplasm of the germ cell","type":"exact"},{"name":"malignant tumor of germ cell","type":"exact"},{"name":"malignant tumor of the germ cell","type":"exact"},{"name":"malignant tumour of germ cell","type":"exact"},{"name":"malignant tumour of the germ cell","type":"exact"}],"termid":"MONDO:0006290","xrefs":{"Monarch":{"xref_id":"0006290"}}}


id: GO:0160140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(1911/1915/1917) in 23S rRNA = pseudouridine(1911/1915/1917) in 23S rRNA.","definition_xrefs":["EC:5.4.99.23","RHEA:42524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"23S rRNA pseudouridine(1911/1915/1917) synthase activity","termid":"GO:0160140"}


id: MONDO:0018273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"XYLT1-congenital disorder of glycosylation","secondary_identifiers":["Orphanet:370930","UMLS:C4750849","GARD:21599","MEDGEN:1659170"],"synonyms":[{"name":"XYLT1-CDG - xylosyltransferase 1 congenital disorder of glycosylation","type":"exact"},{"name":"XYLT1-congenital disorder of glycosylation","type":"exact"},{"name":"XYLT18-CDG","type":"exact"}],"termid":"MONDO:0018273","xrefs":{"Monarch":{"xref_id":"0018273"}}}


id: PBO:0089218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex large subunit Toa1","termid":"PBO:0089218"}


id: MONDO:0019203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute interstitial pneumonia (AIP), also referred to as Hamman-Rich syndrome, is a rapidly progressive and histologically distinct form of idiopathic interstitial pneumonia.","definition_xrefs":["Orphanet:79126"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete idiopathic pulmonary fibrosis (obsolete MONDO:0008345)","termid":"MONDO:0008345"},{"relation_name":"is_a","term_name":"idiopathic interstitial pneumonia","termid":"MONDO:0002429"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute interstitial pneumonia","secondary_identifiers":["MEDGEN:39340","MedDRA:10066728","NCIT:C35806","SCTID:236302005","NANDO:1200420","GARD:12835","UMLS:C0085786","ICD9:516.33","DOID:2800","icd11.foundation:2116884221"],"synonyms":[{"name":"AIP","type":"exact"},{"name":"Hamman-rich disease","type":"exact"},{"name":"Hamman-rich syndrome","type":"exact"},{"name":"accelerated interstitial pneumonia","type":"exact"},{"name":"acute interstitial pneumonitis","type":"exact"},{"name":"idiopathic pulmonary fibrosis, acute fatal form","type":"exact"}],"termid":"MONDO:0019203","xrefs":{"Monarch":{"xref_id":"0019203"}}}


id: GO:0043897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.133-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan alpha-maltohydrolase activity","type":"exact"},{"name":"glucan-1,4-alpha-maltohydrolase activity","type":"exact"},{"name":"maltogenic alpha-amylase activity","type":"exact"}],"termid":"GO:0043897"}


id: PBO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.7","termid":"PBO:0000395"}


id: MONDO:0011257
data:
  {"annotated_genes":["SJAG_02648"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88142],"is_not":false,"summary":null,"term":"MONDO:0011257"}]},"cv_name":"mondo","definition":"MPI-CDG is a form of congenital disorders of N-linked glycosylation, characterized by cyclic vomiting, profound hypoglycemia, failure to thrive, liver fibrosis, gastrointestinal complications (protein-losing enteropathy with hypoalbuminaemia, life-threatening intestinal bleeding of diffuse origin), and thrombotic events (protein C and S deficiency, low anti-thrombine III levels), whereas neurological development and cognitive capacity is usually normal. The clinical course is variable even within families. The disease is caused by loss of function of the gene MPI (15q24.1).","definition_xrefs":["Orphanet:79319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0005046"],"is_obsolete":false,"name":"MPI-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080554","SCTID:124668009","MESH:C535740","ICD9:277.6","GARD:9830","MEDGEN:400692","OMIM:602579","UMLS:C1865145"],"synonyms":[{"name":"CDG 1B","type":"related"},{"name":"CDG Ib","type":"related"},{"name":"CDG gastrointestinal type","type":"related"},{"name":"CDG syndrome type IB","type":"exact"},{"name":"CDG, gastrointestinal type","type":"related"},{"name":"CDG-Ib","type":"exact"},{"name":"CDG1B","type":"exact"},{"name":"MPI-CDG","type":"exact"},{"name":"MPI-CDG (CDG-Ib)","type":"related"},{"name":"Mannosephosphate isomerase deficiency","type":"related"},{"name":"Mpi deficiency","type":"related"},{"name":"Protein-losing enteropathy-hepatic fibrosis syndrome","type":"related"},{"name":"SLSJ syndrome","type":"related"},{"name":"Saguenay Lac Saint Jean syndrome","type":"related"},{"name":"Saguenay-Lac Saint-Jean syndrome","type":"related"},{"name":"Slsj syndrome","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type IB","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1B","type":"related"},{"name":"congenital disorder of glycosylation type 1b","type":"exact"},{"name":"congenital disorder of glycosylation type IB","type":"exact"},{"name":"congenital disorder of glycosylation, type IB","type":"related"},{"name":"phosphomannose isomerase deficiency","type":"exact"}],"termid":"MONDO:0011257","terms_by_termid":{"MONDO:0011257":null},"xrefs":{"Monarch":{"xref_id":"0011257"}}}


id: GO:0080090
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id: GO:0030134
data:
  {"annotated_genes":["SJAG_00357","SJAG_04002","SJAG_03907","SJAG_00767","SJAG_02264","SJAG_03153","SJAG_00785","SJAG_04196","SJAG_01642","SJAG_05013","SJAG_04023","SJAG_01991","SJAG_02539","SJAG_02120","SJAG_04592","SJAG_04513","SJAG_00072","SJAG_01939","SJAG_04740","SJAG_02839","SJAG_04598","SJAG_03270","SJAG_04112","SJAG_03558","SJAG_05345","SJAG_02349","SJAG_01633","SJAG_00557","SJAG_05344","SJAG_03933","SJAG_04402","SJAG_00906","SJAG_00284"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71592,72763,74021,76256,76420,77423,77484,78713,78749,80597,81026,93362,94983,97473,105168,112697,118499,120811],"is_not":false,"summary":null,"term":"GO:0030134"},{"annotations":[77404,73086,76598,73208,78870,76956,78294,74761,97372,80242],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[72185,75649,102969,77879,68748],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"A vesicle with a coat formed of the COPII coat complex proteins. The COPII coat complex is formed by the Sec23p/Sec24p and the Sec13p/Sec31p heterodimers. COPII-associated vesicles transport proteins from the rough endoplasmic reticulum to the Golgi apparatus (anterograde transport).","definition_xrefs":["PMID:11252894","PMID:17499046","PMID:22160157","PMID:8004676","Wikipedia:COPII"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00357":null,"SJAG_00557":null,"SJAG_00767":null,"SJAG_00785":null,"SJAG_00906":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01939":null,"SJAG_01991":null,"SJAG_02120":null,"SJAG_02264":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_02839":null,"SJAG_03153":null,"SJAG_03270":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_03933":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04112":null,"SJAG_04196":null,"SJAG_04402":null,"SJAG_04513":null,"SJAG_04592":null,"SJAG_04598":null,"SJAG_04740":null,"SJAG_05013":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"COPII-coated ER to Golgi transport vesicle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030138","GO:0140045"],"synonyms":[{"name":"COPII vesicle","type":"related"},{"name":"COPII-associated ER to Golgi transport vesicle","type":"exact"},{"name":"COPII-associated vesicle","type":"exact"},{"name":"COPII-coated vesicle","type":"exact"},{"name":"ER to Golgi constitutive secretory pathway transport vesicle","type":"related"},{"name":"ER to Golgi transport vesicle","type":"related"},{"name":"ER-Golgi transport vesicle","type":"related"},{"name":"endoplasmic reticulum to Golgi transport vesicle","type":"related"},{"name":"endoplasmic reticulum-Golgi transport vesicle","type":"related"}],"termid":"GO:0030134","terms_by_termid":{"GO:0012507":null,"GO:0030127":null,"GO:0030134":null}}


id: PBO:0050119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 29","termid":"PBO:0050119"}


id: PR:O74919
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rnc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"RNA-binding protein that suppresses calcineurin deletion 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rnc1","type":"exact"}],"termid":"PR:O74919"}


id: GO:0048001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-erythrose 4-phosphate + H2O + NAD+ = 4-phospho-D-erythronate + 2 H+ + NADH.","definition_xrefs":["EC:1.2.1.72","RHEA:12056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"erythrose-4-phosphate dehydrogenase activity","secondary_identifiers":["GO:0033724","KEGG_REACTION:R01825","MetaCyc:ERYTH4PDEHYDROG-RXN"],"synonyms":[{"name":"D-erythrose 4-phosphate:NAD+ oxidoreductase activity","type":"related"},{"name":"E4P dehydrogenase activity","type":"related"},{"name":"E4PDH","type":"related"},{"name":"Epd dehydrogenase activity","type":"related"},{"name":"GapB","type":"related"},{"name":"erythrose 4-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0048001"}


id: GO:0070135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-1,2-linked oligomannosides, which are found in fungal cell wall phosphopeptidomannan and phospholipomannan.","definition_xrefs":["PMID:18234669","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"beta-1,2-oligomannoside metabolic process","synonyms":[{"name":"beta-1,2-oligomannoside metabolism","type":"exact"}],"termid":"GO:0070135"}


id: GO:0061860
data:
  {"annotated_genes":["SJAG_04150","SJAG_01010","SJAG_00272","SJAG_00729","SJAG_02182"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91405,95815,97139,114247,114805],"is_not":false,"summary":null,"term":"GO:0061860"}]},"cv_name":"molecular_function","definition":"Facilitating the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their removal from the DNA duplex, driven by ATP hydrolysis.","definition_xrefs":["GOC:vw","PMID:23499004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA clamp unloader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA clamp unloading activity","type":"exact"}],"termid":"GO:0061860","terms_by_termid":{"GO:0061860":null}}


id: PR:O74826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquinone biosynthesis protein COQ7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02696","PANTHER:PTHR11237:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-demethoxyubiquinone hydroxylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.15c","secondary_identifiers":["UniProtKB:O74826"],"synonyms":[{"name":"DMQ hydroxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COQ7","type":"exact"},{"name":"ubiquinone biosynthesis monooxygenase COQ7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74826"}


id: GO:0043543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acyl group, any group or radical of the form RCO- where R is an organic group, to a protein amino acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein acylation","synonyms":[{"name":"protein amino acid acylation","type":"exact"}],"termid":"GO:0043543"}


id: FYPO:0006611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized intermittently to the Cdr2 medial cortical node complex is associated with the complex less frequently than normal.","definition_xrefs":["PMID:29514920","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex","termid":"FYPO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex","synonyms":[{"name":"decreased frequency of bursts of intermittent protein localization to Cdr2 medial cortical node complex","type":"related"},{"name":"decreased frequency of protein localization bursts to Cdr2 medial cortical node complex","type":"related"},{"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"},{"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during transient localization to Cdr2 medial cortical node complex","type":"exact"},{"name":"decreased frequency of protein visits to Cdr2 medial cortical node complex","type":"related"},{"name":"reduced frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex","type":"exact"}],"termid":"FYPO:0006611"}


id: GO:0052611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-carotene + a reduced electron acceptor + oxygen = beta-cryptoxanthin + an oxidized electron acceptor + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-carotene 3-hydroxylase activity (obsolete GO:0052611)","synonyms":[{"name":"beta-carotene hydroxylase activity","type":"broad"},{"name":"carotene beta-ring hydroxylase activity","type":"broad"}],"termid":"GO:0052611"}


id: PBO:0086364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aldose 1-epimerase superfamily protein; non-essential gene; highly expressed under anaeorbic conditions","termid":"PBO:0086364"}


id: MONDO:0022735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cyst","termid":"MONDO:0005262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroid plexus cyst","secondary_identifiers":["NCIT:C4351","MEDGEN:87376","SCTID:230790004","UMLS:C0338597"],"synonyms":[{"name":"CPC - choroid plexus cyst","type":"related"},{"name":"choroid plexus cyst","type":"exact"}],"termid":"MONDO:0022735","xrefs":{"Monarch":{"xref_id":"0022735"}}}


id: GO:0007064
data:
  {"annotated_genes":["SJAG_00682","SJAG_02726","SJAG_04755","SJAG_02606","SJAG_04791","SJAG_05019","SJAG_01067","SJAG_00806","SJAG_00796","SJAG_03377","SJAG_00433","SJAG_04508","SJAG_02373","SJAG_03418","SJAG_01831","SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57538,63442,68129,68439,71671,72241,72657,73851,89970,102725,109672,112508],"is_not":false,"summary":null,"term":"GO:0007064"},{"annotations":[76785,102826],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034087"},{"annotations":[92753,101002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071962"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission.","definition_xrefs":["PMID:11389843","PMID:10827941","PMID:14623866","GOC:rn","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00433":null,"SJAG_00682":null,"SJAG_00796":null,"SJAG_00806":null,"SJAG_01067":null,"SJAG_01601":null,"SJAG_01831":null,"SJAG_02373":null,"SJAG_02606":null,"SJAG_02726":null,"SJAG_03377":null,"SJAG_03418":null,"SJAG_04508":null,"SJAG_04755":null,"SJAG_04791":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0007064","terms_by_termid":{"GO:0007064":null,"GO:0034087":null,"GO:0071962":null}}


