# terms

id: PBO:0011481
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defect of the gene silencing at centromeric heterochromatin","termid":"PBO:0011481"}


id: PBO:0047190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 207 member C, pseudogene","termid":"PBO:0047190"}


id: GO:0050064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: luteolin + UDP-alpha-D-glucuronate = luteolin 7-O-beta-D-glucosiduronate + UDP.","definition_xrefs":["RHEA:10568","EC:2.4.1.189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"luteolin 7-O-glucuronosyltransferase activity","secondary_identifiers":["MetaCyc:LUTEOLIN-7-O-GLUCORONOSYLTRANSFERASE-RXN","KEGG_REACTION:R03589"],"synonyms":[{"name":"LGT","type":"related"},{"name":"UDP-glucuronate:luteolin 7-O-glucuronosyltransferase activity","type":"related"},{"name":"UDPglucuronate:luteolin 7-O-glucuronosyltransferase activity","type":"related"},{"name":"luteolin 7-O-glucoronosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucuronate-luteolin 7-O-glucuronosyltransferase activity","type":"related"}],"termid":"GO:0050064"}


id: PBO:0064840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12B","termid":"PBO:0064840"}


id: PBO:0012847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide-methionine (R)-S-oxide reductase MsrB","termid":"PBO:0012847"}


id: SO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the micronuclei of a cell.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micronuclear_sequence","synonyms":[{"name":"micronuclear sequence","type":"exact"}],"termid":"SO:0000084"}


id: GO:0042565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex which usually consists of three components, e.g. in Xenopus and yeast, the export receptor CRM1 (also known as exportin 1), the Ran protein and any RNA with a nuclear export sequence (NES). The complex acts to export RNA molecules with a NES from the nucleus through a nuclear pore.","definition_xrefs":["PMID:9323123","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport complex","termid":"GO:0031074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA nuclear export complex","termid":"GO:0042565"}


id: GO:1905572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ganglioside GM1 to membrane.","definition_xrefs":["GO_REF:0000078","GOC:TermGenie","PMID:1454804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide transport","termid":"GO:0035627"},{"relation_name":"is_a","term_name":"glycolipid transport","termid":"GO:0046836"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ganglioside GM1 transport to membrane","termid":"GO:1905572"}


id: PBO:0004261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP citrate synthase subunit 1 (predicted)","termid":"PBO:0004261"}


id: PBO:0114316
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat containing","termid":"PBO:0114316"}


id: PBO:0076539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 68 pseudogene","termid":"PBO:0076539"}


id: PBO:0066850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 150","termid":"PBO:0066850"}


id: GO:0009550
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasmodesma that consists of a simple, single channel; found predominantly in young tissue and formed as a function of cell plate formation during cytokinesis.","definition_xrefs":["PMID:15012255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmodesma","termid":"GO:0009506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"primary plasmodesma","synonyms":[{"name":"simple plasmodesma","type":"exact"}],"termid":"GO:0009550"}


id: GO:0018702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene + H+ + 2 e- = Cl- + 1-chloro-2,2-bis(4-chlorophenyl)ethene. 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene is also known as DDE; 1-chloro-2,2-bis(4-chlorophenyl)ethene is also known as DDMU.","definition_xrefs":["UM-BBD_reactionID:r0440"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene dehalogenase activity (obsolete GO:0018702)","synonyms":[{"name":"1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene dehalogenase activity","type":"exact"},{"name":"DDE dehalogenase activity","type":"exact"}],"termid":"GO:0018702"}


id: GO:0033243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways leading to the breakdown of amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of amine catabolic process","termid":"GO:0033241"},{"relation_name":"positively_regulates","term_name":"amine catabolic process","termid":"GO:0009310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amine catabolic process","synonyms":[{"name":"positive regulation of amine breakdown","type":"exact"},{"name":"positive regulation of amine catabolism","type":"exact"},{"name":"positive regulation of amine degradation","type":"exact"}],"termid":"GO:0033243"}


id: MOD:00634
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:770170","Unimod:324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethyl 3,3'-dithiobispropionimidate","synonyms":[{"name":"DTBP","type":"related"},{"name":"dimethyl 3,3'-dithiobispropionimidate","type":"related"}],"termid":"MOD:00634"}


id: GO:0009515
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Appressed thylakoid membranes that are part of a granum (stacked regions). A characteristic of these appressed regions is the preferential localization of photosystem II.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid","termid":"GO:0009534"},{"relation_name":"part_of","term_name":"granum","termid":"GO:0009542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"granal stacked thylakoid","synonyms":[{"name":"chloroplast stacked thylakoid","type":"exact"}],"termid":"GO:0009515"}


id: GO:0070559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex found in the lysosome that contains beta-galactosidase, cathepsin A, alpha-neuraminidase and N-acetylgalactosamine-6-sulfate sulfatase, and is involved in glycosaminoglycan catabolism.","definition_xrefs":["GOC:mah","PMID:8910459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"lysosomal multienzyme complex","synonyms":[{"name":"GALNS-lysosomal hydrolase 1.27 MDa complex","type":"narrow"}],"termid":"GO:0070559"}


id: PBO:0002417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Has1 (predicted)","termid":"PBO:0002417"}


id: PBO:0060463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NALCN antisense RNA 1","termid":"PBO:0060463"}


id: GO:2000814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of barbed-end actin filament capping.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of barbed-end actin filament capping","termid":"GO:2000812"},{"relation_name":"positively_regulates","term_name":"barbed-end actin filament capping","termid":"GO:0051016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0007010","GO:0044085","GO:0030036"],"is_obsolete":false,"name":"positive regulation of barbed-end actin filament capping","synonyms":[{"name":"positive regulation of barbed-end F-actin capping activity","type":"exact"},{"name":"positive regulation of barbed-end actin capping activity","type":"exact"},{"name":"positive regulation of plus-end F-actin capping activity","type":"exact"},{"name":"positive regulation of plus-end actin filament capping activity","type":"exact"}],"termid":"GO:2000814"}


id: MONDO:0007146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apnea, central sleep (obsolete MONDO:0007146)","termid":"MONDO:0007146","xrefs":{"Monarch":{"xref_id":"0007146"}}}


id: GO:0062075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular component assembly process of forming pollen apertures, areas where exine is reduced or absent, in the pollen cell wall.","definition_xrefs":["PMID:30150313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"part_of","term_name":"pollen wall assembly","termid":"GO:0010208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pollen aperture formation","termid":"GO:0062075"}


id: PBO:0075310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5 pseudogene 2","termid":"PBO:0075310"}


id: PBO:0060318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomaker, myoblast fusion factor","termid":"PBO:0060318"}


id: PBO:0036340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase Dal2","termid":"PBO:0036340"}


id: FYPO:0005935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of meiotic recombination is normal (i.e. indistinguishable from wild type). Meiotic recombination is a cellular process in which double strand breaks are formed and repaired through a double Holliday junction intermediate, resulting in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes.","definition_xrefs":["GO:0007131","PMID:19470480","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic recombination","termid":"FYPO:0000488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic recombination frequency","synonyms":[{"name":"normal occurrence of meiotic recombination","type":"exact"}],"termid":"FYPO:0005935"}


id: FYPO:0003156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the monopolar growth of a cell is normal (i.e. indistinguishable from wild type in timing, extent, rate, etc.) in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:24146635","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell growth","termid":"FYPO:0002085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal monopolar cell growth","synonyms":[{"name":"normal monopolar vegetative cell growth","type":"exact"}],"termid":"FYPO:0003156"}


id: GO:0050030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-pipecolate + acceptor = delta1-piperideine-6-carboxylate + reduced acceptor. Delta1-piperideine-6-carboxylate is also known as 2,3,4,5-tetrahydropyridine-2-carboxylate.","definition_xrefs":["MetaCyc:L-PIPECOLATE-DEHYDROGENASE-RXN","EC:1.5.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-pipecolate dehydrogenase activity","secondary_identifiers":["RHEA:19777"],"synonyms":[{"name":"L-pipecolate:(acceptor) 1,6-oxidoreductase activity","type":"related"},{"name":"L-pipecolate:acceptor 1,6-oxidoreductase activity","type":"related"}],"termid":"GO:0050030"}


id: PBO:0060454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAGPA antisense RNA 1","termid":"PBO:0060454"}


id: GO:0005980
data:
  {"annotated_genes":["SJAG_00115","SJAG_06309","SJAG_01783","SJAG_02076","SJAG_01561","SJAG_04963","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105204],"is_not":false,"summary":null,"term":"GO:0005980"},{"annotations":[80639,75151,74859,81658,73575,73837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen metabolic process","termid":"GO:0005977"},{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_02076":null,"SJAG_03851":null,"SJAG_04963":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006091"],"is_obsolete":false,"name":"glycogen catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70221"],"synonyms":[{"name":"glycogen breakdown","type":"exact"},{"name":"glycogen catabolism","type":"exact"},{"name":"glycogen degradation","type":"exact"},{"name":"glycogenolysis","type":"exact"}],"termid":"GO:0005980","terms_by_termid":{"GO:0005980":null,"GO:0061723":null}}


id: PBO:0077872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 3","termid":"PBO:0077872"}


id: PBO:0087913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in phospholipid synthesis; required for derepression of inositol-choline-regulated genes involved in phospholipid synthesis; forms a complex, with Ino2p, that binds the inositol-choline-responsive element through a basic helix-loop-helix domain","termid":"PBO:0087913"}


id: GO:0019428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of allantoin, (2,5-dioxo-4-imidazolidinyl)urea.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin metabolic process","termid":"GO:0000255"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantoin biosynthetic process","secondary_identifiers":["MetaCyc:URSIN-PWY"],"synonyms":[{"name":"allantoin anabolism","type":"exact"},{"name":"allantoin biosynthesis","type":"exact"},{"name":"allantoin formation","type":"exact"},{"name":"allantoin synthesis","type":"exact"}],"termid":"GO:0019428"}


id: MONDO:0010920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital malformation of the external ear, seen more frequently in males, that occurs sporadically or is inherited, that is characterized by unilateral (79-93% of cases, 60% of which involve the right ear) or bilateral small and abnormally shaped auricles and that is often associated with atresia or stenosis of the ear canal, attention deficit disorders and delayed language development. The variation in auricle size ranges from grade I, where the auricle is simply smaller than normal, to grade IV, also known as anotia, where there is a complete absence of the external ear and of the auditory canal.","definition_xrefs":["Orphanet:83463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia","secondary_identifiers":["GARD:431","MESH:C537772","ICD10CM:Q17.2","MEDGEN:322201","MedDRA:10027555","OMIM:600674","SCTID:35045004","UMLS:C1833486","MESH:D065817","ICD9:744.23","icd11.foundation:2005415414"],"synonyms":[{"name":"M-A","type":"exact"},{"name":"anotia","type":"narrow"},{"name":"congenital microtias","type":"exact"},{"name":"microtia, congenital","type":"exact"},{"name":"microtia-anotia","type":"exact"},{"name":"microtias, congenital","type":"exact"}],"termid":"MONDO:0010920","xrefs":{"Monarch":{"xref_id":"0010920"}}}


id: PR:O94335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.02","secondary_identifiers":["UniProtKB:O94335"],"synonyms":[{"name":"Spom972h-STT3B","type":"exact"},{"name":"oligosaccharyl transferase subunit stt3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94335"}


id: GO:0050143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isonocardicin A = nocardicin A. May also catalyse the epimerisation of isonocardicin C, but the in vivo substrate appears to be isonocardicin A.","definition_xrefs":["EC:5.1.1.14","RHEA:22792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nocardicin-A epimerase activity","secondary_identifiers":["KEGG_REACTION:R03073","MetaCyc:NOCARDICIN-A-EPIMERASE-RXN"],"synonyms":[{"name":"isonocardicin A epimerase activity","type":"related"}],"termid":"GO:0050143"}


id: PATO:0001935
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being roundish, a little inclining to be oblong.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circular","termid":"PATO:0000411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obtuse","synonyms":[{"name":"roundish","type":"exact"}],"termid":"PATO:0001935"}


id: GO:0075296
data:
  {"annotated_genes":["SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104187],"is_not":false,"summary":null,"term":"GO:0075296"},{"annotations":[92554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of ascospore formation","termid":"GO:0034307"},{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0030437"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0030437"],"is_obsolete":false,"name":"positive regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075296","terms_by_termid":{"GO:0075296":null,"GO:1903024":null}}


id: PBO:0062868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 5","termid":"PBO:0062868"}


id: MONDO:0012960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the SYNGAP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 5","secondary_identifiers":["OMIM:612621","GARD:12558","DOID:0070035","MESH:C567234","Orphanet:544254","UMLS:C2675473","MEDGEN:382611"],"synonyms":[{"name":"MRD5","type":"exact"},{"name":"SYNGAP1 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"SYNGAP1 gene mutation linked to intellectual disability, schizophrenia and autism","type":"related"},{"name":"SYNGAP1 syndrome","type":"related"},{"name":"SYNGAP1-related NSID","type":"related"},{"name":"SYNGAP1-related developmental and epileptic encephalopathy","type":"exact"},{"name":"SYNGAP1-related non-syndromic intellectual disability","type":"related"},{"name":"autosomal dominant intellectual disability 5","type":"exact"},{"name":"autosomal dominant mental retardation 5","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 5","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in SYNGAP1","type":"exact"},{"name":"intellectual disability, autosomal dominant 5","type":"exact"},{"name":"intellectual disability, autosomal dominant type 5","type":"exact"},{"name":"mental retardation, autosomal dominant 5","type":"related"},{"name":"mental retardation, autosomal dominant type 5","type":"exact"}],"termid":"MONDO:0012960","xrefs":{"Monarch":{"xref_id":"0012960"}}}


id: FYPO:0007430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dGTP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular dNTP level","termid":"FYPO:0005752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular dGTP level","synonyms":[{"name":"increased cellular dGTP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dGTP level during vegetative growth","type":"exact"},{"name":"increased dGTP accumulation","type":"related"}],"termid":"FYPO:0007430"}


id: PBO:0054920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2334","termid":"PBO:0054920"}


id: PBO:0074017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 11","termid":"PBO:0074017"}


id: PBO:0049544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 7","termid":"PBO:0049544"}


id: PBO:0053826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1090","termid":"PBO:0053826"}


id: PBO:0038548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 3","termid":"PBO:0038548"}


id: FYPO:0008362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population contain variable numbers of lipid droplets. Some cells may contain more or less lipid droplets than normal, while others may lack any detectable lipid droplets.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"variable cellular lipid droplet content","termid":"FYPO:0008362"}


id: GO:0019449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including hypotaurine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"L-cysteine catabolic process to hypotaurine","synonyms":[{"name":"L-cysteine breakdown to hypotaurine","type":"exact"},{"name":"L-cysteine degradation to hypotaurine","type":"exact"}],"termid":"GO:0019449"}


id: GO:0010641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the platelet-derived growth factor receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:hjd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010640"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor receptor signaling pathway","synonyms":[{"name":"positive regulation of platelet-derived growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0010641"}


id: GO:0052431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the T-cell mediated immune response of a symbiont organism, where the two organisms are in a symbiotic interaction. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont T-cell mediated immune response (obsolete GO:0052431)","synonyms":[{"name":"modulation by organism of symbiont T-cell mediated immune response","type":"exact"}],"termid":"GO:0052431"}


id: PBO:0030650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_methylamine_level","termid":"PBO:0030650"}


id: PBO:0017841
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S Phase Delayed","termid":"PBO:0017841"}


id: PBO:0052116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily C member 4","termid":"PBO:0052116"}


id: PBO:0060089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 36","termid":"PBO:0060089"}


id: GO:1900139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of arachidonic acid secretion.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of icosanoid secretion","termid":"GO:0032304"},{"relation_name":"is_a","term_name":"regulation of arachidonate secretion","termid":"GO:0090237"},{"relation_name":"negatively_regulates","term_name":"arachidonate secretion","termid":"GO:0050482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of arachidonate secretion","synonyms":[{"name":"down regulation of arachidonic acid secretion","type":"exact"},{"name":"down-regulation of arachidonic acid secretion","type":"exact"},{"name":"downregulation of arachidonic acid secretion","type":"exact"},{"name":"inhibition of arachidonic acid secretion","type":"narrow"},{"name":"negative regulation of arachidonic acid secretion","type":"exact"}],"termid":"GO:1900139"}


id: PBO:0084253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol hexakisphosphate and inositol heptakisphosphate kinase; generation of high energy inositol pyrophosphates by Kcs1p is required for many processes such as vacuolar biogenesis, stress response, RNA polymerase I-mediated rRNA transcription and telomere maintenance; inositol hexakisphosphate is also known as IP6; inositol heptakisphosphate is also known as IP7","termid":"PBO:0084253"}


id: PBO:0025477
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fabry disease","termid":"PBO:0025477"}


id: MONDO:0060555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital vertebral-cardiac-renal anomalies syndrome","termid":"MONDO:0020831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0006025"],"is_obsolete":false,"name":"vertebral, cardiac, renal, and limb defects syndrome 2","secondary_identifiers":["MEDGEN:1624065","GARD:18509","OMIM:617661","UMLS:C4540014"],"synonyms":[{"name":"VCRL2","type":"related"},{"name":"congenital NAD deficiency disorder 2","type":"related"},{"name":"kynureninase deficiency, complete","type":"related"},{"name":"vertebral, cardiac, renal, and limb defects syndrome 2","type":"exact"}],"termid":"MONDO:0060555","xrefs":{"Monarch":{"xref_id":"0060555"}}}


id: PBO:0070311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, Ro60-associated Y3","termid":"PBO:0070311"}


id: MONDO:0018768
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"}]},"cv_name":"mondo","definition":"Familial cold urticaria (FCAS) is the mildest form of cryopyrin-associated periodic syndrome (CAPS) and is characterized by recurrent episodes of urticaria-like skin rash triggered by exposure to cold associated with low-grade fever, general malaise, eye redness and arthralgia/myalgia.","definition_xrefs":["Orphanet:47045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryopyrin-associated periodic syndrome","termid":"MONDO:0016168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial cold autoinflammatory syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1122","NCIT:C119053","UMLS:C0343068","NANDO:2200449","NANDO:2200454","NANDO:1200466","OMIMPS:120100","GARD:9535","NANDO:2201068","DOID:0090061","icd11.foundation:1932140025","MedDRA:10064570","MEDGEN:137986"],"synonyms":[{"name":"FCAS","type":"exact"},{"name":"FCU","type":"exact"},{"name":"familial cold autoinflammatory syndrome","type":"exact"},{"name":"familial cold urticaria","type":"related"},{"name":"familial polymorphous cold eruption","type":"related"}],"termid":"MONDO:0018768","terms_by_termid":{"MONDO:0013766":null},"xrefs":{"Monarch":{"xref_id":"0018768"}}}


id: GO:1905804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23721876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to manganese ion","termid":"GO:1905802"},{"relation_name":"positively_regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to manganese ion","synonyms":[{"name":"activation of cellular response to manganese","type":"narrow"},{"name":"activation of cellular response to manganese ion","type":"narrow"},{"name":"positive regulation of cellular response to manganese","type":"exact"},{"name":"up regulation of cellular response to manganese","type":"exact"},{"name":"up regulation of cellular response to manganese ion","type":"exact"},{"name":"up-regulation of cellular response to manganese","type":"exact"},{"name":"up-regulation of cellular response to manganese ion","type":"exact"},{"name":"upregulation of cellular response to manganese","type":"exact"},{"name":"upregulation of cellular response to manganese ion","type":"exact"}],"termid":"GO:1905804"}


id: GO:0004553
data:
  {"annotated_genes":["SJAG_05001","SJAG_02799","SJAG_03280","SJAG_02076","SJAG_02192","SJAG_00310","SJAG_04238","SJAG_04327","SJAG_03646","SJAG_02590","SJAG_03032","SJAG_01883","SJAG_04789","SJAG_02949","SJAG_03824","SJAG_00096","SJAG_05272","SJAG_02718","SJAG_04301","SJAG_04363","SJAG_01017","SJAG_01888","SJAG_02435","SJAG_01858","SJAG_02131","SJAG_04859","SJAG_00485","SJAG_00620","SJAG_02649","SJAG_03295","SJAG_01171","SJAG_04850","SJAG_02711","SJAG_03444","SJAG_02446","SJAG_02478","SJAG_01029","SJAG_04864","SJAG_00667","SJAG_04851"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64141,77787,90510],"is_not":false,"summary":null,"term":"GO:0004553"},{"annotations":[73219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004555"},{"annotations":[103497,103496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004558"},{"annotations":[67812,64813,68856,60586,59946,62080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004556"},{"annotations":[69594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004557"},{"annotations":[90119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004559"},{"annotations":[110337,89253,117611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008422"},{"annotations":[79948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004568"},{"annotations":[62666,71023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052861"},{"annotations":[89183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106407"},{"annotations":[80573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004573"},{"annotations":[60469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004339"},{"annotations":[57911,70086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051118"},{"annotations":[79682,81863,75848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042973"},{"annotations":[103845,103846,75020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046557"},{"annotations":[78831,72223,96966,75017,72326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004338"},{"annotations":[78572,76941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015926"},{"annotations":[57528,64042,58145,57914,98805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008496"},{"annotations":[80552,68152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004571"},{"annotations":[78576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004575"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any O-glycosyl bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on glycosyl bonds","termid":"GO:0016798"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00310":null,"SJAG_00485":null,"SJAG_00620":null,"SJAG_00667":null,"SJAG_01017":null,"SJAG_01029":null,"SJAG_01171":null,"SJAG_01858":null,"SJAG_01883":null,"SJAG_01888":null,"SJAG_02076":null,"SJAG_02131":null,"SJAG_02192":null,"SJAG_02435":null,"SJAG_02446":null,"SJAG_02478":null,"SJAG_02590":null,"SJAG_02649":null,"SJAG_02711":null,"SJAG_02718":null,"SJAG_02799":null,"SJAG_02949":null,"SJAG_03032":null,"SJAG_03280":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_03824":null,"SJAG_04238":null,"SJAG_04301":null,"SJAG_04327":null,"SJAG_04363":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04859":null,"SJAG_04864":null,"SJAG_05001":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, hydrolyzing O-glycosyl compounds","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016800","EC:3.2.1.-","Reactome:R-HSA-6786652","Reactome:R-HSA-5694563","Reactome:R-HSA-9661820"],"synonyms":[{"name":"O-glucosyl hydrolase activity","type":"exact"}],"termid":"GO:0004553","terms_by_termid":{"GO:0004338":null,"GO:0004339":null,"GO:0004553":null,"GO:0004555":null,"GO:0004556":null,"GO:0004557":null,"GO:0004558":null,"GO:0004559":null,"GO:0004568":null,"GO:0004571":null,"GO:0004573":null,"GO:0004575":null,"GO:0008422":null,"GO:0008496":null,"GO:0015926":null,"GO:0042973":null,"GO:0046557":null,"GO:0051118":null,"GO:0052861":null,"GO:0106407":null}}


id: MONDO:0011667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monogenic diabetes caused by inactivating mutation(s) in the PDX1 gene, encoding pancreas/duodenum homeobox protein 1. Homozygous PDX1 mutations result in permanent neonatal diabetes.","definition_xrefs":["NCIT:C129746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254","MONDO:0037792","MONDO:0005015","MONDO:0004335"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 4","secondary_identifiers":["SCTID:609571007","GARD:10659","NANDO:2201072","MESH:C563451","MEDGEN:318863","UMLS:C1833382","OMIM:606392","DOID:0111103"],"synonyms":[{"name":"MODY insulin promoter factor-1 related","type":"related"},{"name":"MODY type 4","type":"exact"},{"name":"MODY, type 4","type":"related"},{"name":"MODY, type IV","type":"exact"},{"name":"MODY4","type":"exact"},{"name":"PDX1 maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"PDX1-associated monogenic diabetes","type":"exact"},{"name":"diabetes mellitus MODY type 4","type":"related"},{"name":"maturity onset diabetes of the Young, type 4","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in PDX1","type":"exact"},{"name":"maturity-onset diabetes of the young, type 4","type":"related"},{"name":"type 4 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0011667","xrefs":{"Monarch":{"xref_id":"0011667"}}}


id: PBO:0047741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 4","termid":"PBO:0047741"}


id: GO:0002684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immune system process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune system process","synonyms":[{"name":"activation of immune system process","type":"narrow"},{"name":"stimulation of immune system process","type":"narrow"},{"name":"up regulation of immune system process","type":"exact"},{"name":"up-regulation of immune system process","type":"exact"},{"name":"upregulation of immune system process","type":"exact"}],"termid":"GO:0002684"}


id: PBO:0049225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 6 pseudogene 1","termid":"PBO:0049225"}


id: PBO:0003623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Alp3 (predicted)","termid":"PBO:0003623"}


id: PBO:0083861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Farnesyl-diphosphate farnesyl transferase (squalene synthase); joins two farnesyl pyrophosphate moieties to form squalene in the sterol biosynthesis pathway","termid":"PBO:0083861"}


id: FYPO:0005225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 4 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation during vegetative growth","synonyms":[{"name":"increased histone H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 dimethylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K4 dimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3K4me2 during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005225"}


id: PBO:0042837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 36","termid":"PBO:0042837"}


id: PBO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAP42 family protein involved in TOR signalling (predicted)","termid":"PBO:0005298"}


id: PBO:0084705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial hsp70-type molecular chaperone; required for assembly of iron/sulfur clusters into proteins at a step after cluster synthesis; involved in maturation of Grx5p and Yfh1p, which is a homolog of human frataxin implicated in Friedreich's ataxia","termid":"PBO:0084705"}


id: MOD:01057
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dibromo-L-tyrosine","termid":"MOD:01023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br and (81)Br labeled 3',5'-dibromotyrosine","termid":"MOD:01057"}


id: PBO:0077752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of myb1 like 2 membrane trafficking protein","termid":"PBO:0077752"}


id: GO:0036502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing, in mammals, Derlin-1 and VCP-interacting membrane protein (VIMP). The complex links the p97/VCP-containing ATPase complex with Derlin-1 during translocation of protein substrates from the endoplasmic reticulum to the cytosol for degradation by the cytosolic proteasome.","definition_xrefs":["GOC:PARL","PMID:16186510","GOC:bf","PMID:15215856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005789","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Derlin-1-VIMP complex","synonyms":[{"name":"Derlin-1/VIMP complex","type":"exact"}],"termid":"GO:0036502"}


id: GO:0080016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (-)-E-beta-caryophyllene + diphosphate.","definition_xrefs":["PMID:9442047","PMID:12566586","MetaCyc:RXN-8414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0009975","GO:0003674"],"is_obsolete":false,"name":"(-)-E-beta-caryophyllene synthase activity","secondary_identifiers":["EC:4.2.3.57","RHEA:28294"],"termid":"GO:0080016"}


id: PBO:0070324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 13","termid":"PBO:0070324"}


id: MONDO:0020093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of isolated diffuse palmoplantar keratoderma.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant isolated diffuse palmoplantar keratoderma (obsolete MONDO:0020093)","secondary_identifiers":["Orphanet:98349"],"synonyms":[{"name":"autosomal dominant isolated diffuse palmoplantar hyperkeratosis","type":"exact"},{"name":"isolated diffuse palmoplantar keratoderma, autosomal dominant","type":"exact"}],"termid":"MONDO:0020093","xrefs":{"Monarch":{"xref_id":"0020093"}}}


id: GO:0009868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by jasmonic acid involved in jasmonic acid/ethylene (ethene) dependent systemic resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"jasmonic acid mediated signaling pathway","termid":"GO:0009867"},{"relation_name":"part_of","term_name":"response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0032260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway","synonyms":[{"name":"jasmonic acid and ethene-dependent systemic resistance, jasmonic acid mediated signaling pathway","type":"exact"},{"name":"jasmonic acid mediated signaling pathway (jasmonic acid/ethene-dependent systemic resistance)","type":"exact"},{"name":"jasmonic acid mediated signaling pathway (jasmonic acid/ethylene-dependent systemic resistance)","type":"exact"},{"name":"jasmonic acid/ethene-dependent systemic resistance, jasmonic acid mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethene-dependent systemic resistance, jasmonic acid mediated signalling pathway","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance, jasmonic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0009868"}


id: PBO:0043178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIRBP antisense RNA 1","termid":"PBO:0043178"}


id: GO:0060371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the depolarizing direction away from the resting potential in an atrial cardiomyocyte.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrial cardiac muscle cell membrane depolarization","synonyms":[{"name":"atrial depolarization","type":"related"},{"name":"electrocardiogram PR interval","type":"related"},{"name":"regulation of atrial cardiac muscle cell depolarization","type":"exact"},{"name":"regulation of atrial cardiomyocyte membrane depolarization","type":"exact"}],"termid":"GO:0060371"}


id: GO:0052507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of symbiont jasmonic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway (obsolete GO:0052507)","synonyms":[{"name":"activation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052507"}


id: GO:0046771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The envelopment of a virus, in which the nucleocapsid evaginates from the host inner nuclear membrane system into the perinuclear space, thus acquiring a membrane envelope.","definition_xrefs":["ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding from nuclear membrane","termid":"GO:0046765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from inner nuclear membrane","synonyms":[{"name":"inner nuclear membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from inner nuclear membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from inner nuclear membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from inner nuclear membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from inner nuclear membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046771"}


id: PBO:0046909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member D1","termid":"PBO:0046909"}


id: PBO:0059656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 22","termid":"PBO:0059656"}


id: GO:0060319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Erythrocyte differentiation which occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"},{"relation_name":"part_of","term_name":"primitive hemopoiesis","termid":"GO:0060215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive erythrocyte differentiation","synonyms":[{"name":"primitive RBC differentiation","type":"exact"},{"name":"primitive erythropoiesis","type":"exact"},{"name":"primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0060319"}


id: GO:0046980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tapasin, a member of the MHC class I loading complex which bridges the TAP peptide transporter to class I molecules.","definition_xrefs":["PMID:12594855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tapasin binding","synonyms":[{"name":"TAP binding protein binding","type":"exact"},{"name":"TAPBP binding","type":"related"}],"termid":"GO:0046980"}


id: GO:0044380
data:
  {"annotated_genes":["SJAG_01790","SJAG_00082","SJAG_01775","SJAG_05319","SJAG_05266","SJAG_01211","SJAG_02731","SJAG_00279","SJAG_02695","SJAG_04703","SJAG_02529","SJAG_01224","SJAG_04901","SJAG_03915","SJAG_02045","SJAG_05220","SJAG_00918","SJAG_03437","SJAG_01546","SJAG_02228","SJAG_01371"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061509"},{"annotations":[109093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044379"},{"annotations":[98851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"},{"annotations":[98745,115907,93130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902441"},{"annotations":[72454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035372"},{"annotations":[94167,120653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"},{"annotations":[91827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902440"},{"annotations":[102412,100500,110833,116074,109439,90964,111844,91571,98647,118904,92810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the cytoskeleton.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00279":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_01790":null,"SJAG_02045":null,"SJAG_02228":null,"SJAG_02529":null,"SJAG_02695":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_03915":null,"SJAG_04703":null,"SJAG_04901":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cytoskeleton","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cytoskeleton","type":"exact"}],"termid":"GO:0044380","terms_by_termid":{"GO:0035372":null,"GO:0044379":null,"GO:0061509":null,"GO:1902440":null,"GO:1902441":null,"GO:1904498":null,"GO:1904518":null,"GO:1990976":null}}


id: MONDO:0018869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cobblestone lissencephaly is a rare central nervous system malformation which includes a group of diseases that are characterized by a bumpy (or pebbled) appearance of the cerebral cortex, associated with a thickened cortex, reduction in normal sulcation, ventriculomegaly and reduced, abnormal white matter, as well as brainstem and cerebellum hypoplasia and corpus callosum agenesis. Patients generally present variable degrees of developmental delay, hypotonia and ocular abnomalities, however muscular and ocular involvement may be absent.","definition_xrefs":["Orphanet:51577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cobblestone lissencephaly","secondary_identifiers":["NANDO:1201072","SCTID:253149002","GARD:3277","MEDGEN:96562","MESH:D054222","UMLS:C0431376"],"synonyms":[{"name":"lissencephaly type 2","type":"exact"}],"termid":"MONDO:0018869","xrefs":{"Monarch":{"xref_id":"0018869"}}}


id: PBO:0116227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane queuine and queuosine transmembrane importer, Qtp1","termid":"PBO:0116227"}


id: PBO:0030361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_hypoxia","termid":"PBO:0030361"}


id: PBO:0031576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_integrity_checkpoint","termid":"PBO:0031576"}


id: MONDO:0017153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension (PAH) associated with HIV infection (PAH-HIV) is a form of PAH characterized by elevated pulmonary arterial resistance leading to right heart failure observed as a complication of HIV infection.","definition_xrefs":["Orphanet:275808"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with HIV infection (obsolete MONDO:0017153)","secondary_identifiers":["SCTID:697904001","ICD9:416.8"],"synonyms":[{"name":"PAH associated with HIV infaction","type":"exact"}],"termid":"MONDO:0017153","xrefs":{"Monarch":{"xref_id":"0017153"}}}


id: MONDO:0020782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic painless inflammation of the gums. It is characterized by erythema and edema of the gums and bleeding while brushing the teeth.","definition_xrefs":["NCIT:C34474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingivitis","termid":"MONDO:0002508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic gingivitis","secondary_identifiers":["SCTID:72621003","ICD9:523.1","MEDGEN:965","UMLS:C0008684","icd11.foundation:1542018172","ICD9:523.10"],"synonyms":[{"name":"Chronic Gingivitis","type":"related"},{"name":"Chronic gingivitis","type":"related"},{"name":"chronic gingivitis","type":"exact"}],"termid":"MONDO:0020782","xrefs":{"Monarch":{"xref_id":"0020782"}}}


id: PBO:0065862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB19, member RAS oncogene family","termid":"PBO:0065862"}


id: GO:0099585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"release of sequestered calcium ion into presynaptic cytosol","termid":"GO:0099585"}


id: PBO:0060496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 1 pseudogene 1","termid":"PBO:0060496"}


id: PBO:0000708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3h (p40)","termid":"PBO:0000708"}


id: PBO:0074927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 95","termid":"PBO:0074927"}


id: PBO:0063923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 2","termid":"PBO:0063923"}


id: MONDO:1010997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal muscular atrophy that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy, non-human animal","termid":"MONDO:1010235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy, cattle","secondary_identifiers":["OMIA:000939-9913"],"termid":"MONDO:1010997","xrefs":{"Monarch":{"xref_id":"1010997"}}}


id: PBO:0061845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncoprotein induced transcript 3","termid":"PBO:0061845"}


id: PBO:0058928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7f-2","termid":"PBO:0058928"}


id: MONDO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete severe congenital neutropenia (obsolete MONDO:0000364)","termid":"MONDO:0000364","xrefs":{"Monarch":{"xref_id":"0000364"}}}


id: MONDO:0017971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to a cholesterol synthesis defect (obsolete MONDO:0017971)","secondary_identifiers":["Orphanet:325511"],"synonyms":[{"name":"46,XY DSD due to a cholesterol synthesis defect","type":"exact"}],"termid":"MONDO:0017971","xrefs":{"Monarch":{"xref_id":"0017971"}}}


id: FYPO:0000344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"enlarged nucleus","termid":"FYPO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002403"],"is_obsolete":false,"name":"enlarged nucleus during vegetative growth","synonyms":[{"name":"enlarged nuclei during vegetative growth","type":"exact"},{"name":"enlarged nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000344"}


id: PBO:0047141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 177 member A1","termid":"PBO:0047141"}


id: GO:0006387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The sequence of enzymatic reactions resulting in the addition of a cap to the 5' end of a nascent snRNA transcript.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNA capping (obsolete GO:0006387)","synonyms":[{"name":"snRNA capping","type":"exact"}],"termid":"GO:0006387"}


id: PR:Q9Y7I8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zuo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7I8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zuotin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.01c","synonyms":[{"name":"DnaJ-related protein zuo1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"J protein zuo1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-zuo1","type":"exact"},{"name":"ribosome-associated complex subunit zuo1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7I8"}


id: PBO:0050952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon epsilon","termid":"PBO:0050952"}


id: GO:0050183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-2-(9Z)-octadecenoyl-sn-glycero-3-phosphocholine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = 1-acyl-2-[(R)-12-hydroxyoleoyl]-sn-glycero-3-phosphocholine + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["RHEA:46360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phosphatidylcholine 12-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R03476","MetaCyc:PHOSPHATIDYLCHOLINE-12-MONOOXYGENASE-RXN","EC:1.14.18.4"],"synonyms":[{"name":"1-acyl-2-oleoyl-sn-glycero-3-phosphocholine,NADH:oxygen oxidoreductase (12-hydroxylating)","type":"related"},{"name":"oleate D12-hydroxylase activity","type":"exact"},{"name":"oleate Delta(12)-hydroxylase activity","type":"related"},{"name":"oleate delta12-hydroxylase activity","type":"related"},{"name":"oleate delta12-monooxygenase activity","type":"related"},{"name":"ricinoleic acid synthase activity","type":"related"}],"termid":"GO:0050183"}


id: PBO:0027823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_single-stranded_DNA_binding","termid":"PBO:0027823"}


id: PR:O13879
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.15c gene.","definition_xrefs":["UniProtKB:O13879","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1B3.15C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.15c","synonyms":[{"name":"Spom972h-SPAC1B3.15c","type":"exact"}],"termid":"PR:O13879"}


id: PATO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000805 auditory value (obsolete PATO:0000805)","termid":"PATO:0000805"}


id: FYPO:0006401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more 2'-deoxyribonucleoside triphosphates (dNTPs) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular dNTP level","synonyms":[{"name":"decreased cellular dNTP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dNTP level during vegetative growth","type":"exact"},{"name":"decreased dNTP accumulation","type":"related"},{"name":"reduced cellular dNTP level","type":"exact"}],"termid":"FYPO:0006401"}


id: PBO:0085225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Para hydroxybenzoate polyprenyl transferase; catalyzes the second step in ubiquinone (coenzyme Q) biosynthesis; human COQ2, mutations in which are implicated in an increased risk of mutiple-system atrophy, can complement a yeast coq2 null mutant","termid":"PBO:0085225"}


id: MONDO:0013625
data:
  {"annotated_genes":["SJAG_01039"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89111],"is_not":false,"summary":null,"term":"MONDO:0013625"}]},"cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the VPS35 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late-onset Parkinson disease","termid":"MONDO:0008199"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01039":null},"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:481763","UMLS:C3280133","DOID:0060897","OMIM:614203","GARD:18478"],"synonyms":[{"name":"PARK17","type":"related"},{"name":"Parkinson disease 17","type":"exact"},{"name":"Parkinson disease caused by mutation in VPS35","type":"exact"},{"name":"Parkinson disease type 17","type":"exact"},{"name":"Parkinson's disease 17","type":"related"},{"name":"VPS35 Parkinson disease","type":"exact"},{"name":"autosomal dominant Parkinson disease 17","type":"exact"}],"termid":"MONDO:0013625","terms_by_termid":{"MONDO:0013625":null},"xrefs":{"Monarch":{"xref_id":"0013625"}}}


id: PBO:0031725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination","termid":"PBO:0031725"}


id: FYPO:0001672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a GTPase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal GTPase activity","termid":"FYPO:0001672"}


id: GO:0030662
data:
  {"annotated_genes":["SJAG_05344","SJAG_03153","SJAG_04002","SJAG_00192","SJAG_03907","SJAG_00379","SJAG_04391","SJAG_02282","SJAG_02453","SJAG_00104","SJAG_02482","SJAG_01167","SJAG_03558","SJAG_04609","SJAG_00800","SJAG_00108","SJAG_00906","SJAG_02349","SJAG_00072","SJAG_01508","SJAG_01633","SJAG_00557","SJAG_04023","SJAG_04513","SJAG_04569","SJAG_01809","SJAG_01939","SJAG_02160","SJAG_02805","SJAG_04474","SJAG_02234","SJAG_02177","SJAG_04644","SJAG_00284","SJAG_01025","SJAG_05345","SJAG_04517","SJAG_04070","SJAG_04565","SJAG_02539"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114964,79399,114752,62727],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[76215,110272,58550,80043],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[58962,66569],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[81569,75582],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[68413,96029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030665"},{"annotations":[75392,80112,100324,109052,65254,72605,81686,79796,95069],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[58131,64240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030663"},{"annotations":[74761,73208,76598,97372,78870,77404,73086,76956,78294,80242],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[72185,68748,75649,77879,102969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00557":null,"SJAG_00800":null,"SJAG_00906":null,"SJAG_01025":null,"SJAG_01167":null,"SJAG_01508":null,"SJAG_01633":null,"SJAG_01809":null,"SJAG_01939":null,"SJAG_02160":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02805":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"coated vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0030662","terms_by_termid":{"GO:0012507":null,"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030663":null,"GO:0030665":null}}


id: GO:0033941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2)-alpha-D- and (1->6)-alpha-D- linkages in mannan, releasing D-mannose.","definition_xrefs":["EC:3.2.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"mannan exo-1,2-1,6-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.137-RXN"],"synonyms":[{"name":"1,2-1,6-alpha-D-mannan D-mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,6-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033941"}


id: PBO:0039005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFF1 antisense RNA 1","termid":"PBO:0039005"}


id: GO:0003042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by carotid body-vasomotor excitation and results in a decrease in the diameter of an artery during the chemoreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0323031951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoconstriction of artery involved in chemoreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0002012"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid body chemoreceptor signaling","termid":"GO:0003027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in carotid body chemoreceptor response to lowering of systemic arterial blood pressure","synonyms":[{"name":"vasoconstriction of artery during carotid body chemoreceptor response to lowering of systemic arterial blood pressure","type":"related"}],"termid":"GO:0003042"}


id: PBO:0004074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rictor homolog, Ste20","termid":"PBO:0004074"}


id: PBO:0054794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2208","termid":"PBO:0054794"}


id: PBO:0079777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose glycoprotein glucosyltransferase 2","termid":"PBO:0079777"}


id: PBO:0058724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6852","termid":"PBO:0058724"}


id: GO:0042912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a colicin from one side of a membrane to the other. Colicins are a group of antibiotics produced by E. coli and related species that are encoded by a group of naturally occurring plasmids, e.g. Col E1.","definition_xrefs":["GOC:mtg_transport","GOC:jl","ISBN:0815340729","PMID:17347522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteriocin transmembrane transporter activity","termid":"GO:0022885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"colicin transmembrane transporter activity","termid":"GO:0042912"}


id: PBO:0063555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally expressed 13","termid":"PBO:0063555"}


id: PBO:0080350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 2 pseudogene","termid":"PBO:0080350"}


id: MONDO:0018169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Morning glory syndrome (MGS) is an optic neuropathy characterized by a congenital funnel shaped excavation of the posterior fundus that incorporates the optic disk malformation (resembling the morning glory flower) MGS is usually unilateral and may result in a decrease in best-corrected visual acuity (BCVA). MGS either occurs isolated or associated to other ocular or non-ocular anomalies.","definition_xrefs":["Orphanet:35737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma of optic nerve","termid":"MONDO:0007354"},{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"morning glory syndrome","secondary_identifiers":["GARD:13354","MedDRA:10027974","UMLS:C3554721","MEDGEN:767635"],"synonyms":[{"name":"Ectasic coloboma","type":"exact"},{"name":"Volubilis syndrome","type":"exact"}],"termid":"MONDO:0018169","xrefs":{"Monarch":{"xref_id":"0018169"}}}


id: MONDO:0006735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retrograde flow of duodenal contents (bile acids; pancreatic juice) into the stomach.","definition_xrefs":["MESH:D004383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenal disorder","termid":"MONDO:0002866"},{"relation_name":"is_a","term_name":"gastroesophageal reflux disease","termid":"MONDO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenogastric reflux","secondary_identifiers":["DOID:4071","MedDRA:10060865","EFO:1000909","MEDGEN:4420","UMLS:C0013299"],"synonyms":[{"name":"duodenogastric reflux (finding)","type":"exact"}],"termid":"MONDO:0006735","xrefs":{"Monarch":{"xref_id":"0006735"}}}


id: GO:0060229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a lipase, an enzyme that catalyzes of the hydrolysis of a lipid.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"lipase activator activity","termid":"GO:0060229"}


id: PBO:0029926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GMP_binding","termid":"PBO:0029926"}


id: PBO:0040289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP1B3 antisense RNA 1","termid":"PBO:0040289"}


id: PBO:0043082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 2 subunit","termid":"PBO:0043082"}


id: GO:0048388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the pH of the endosomal lumen, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular pH reduction","termid":"GO:0051452"},{"relation_name":"part_of","term_name":"endosome organization","termid":"GO:0007032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosomal lumen acidification","termid":"GO:0048388"}


id: GO:1902062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of betaine aldehyde.","definition_xrefs":["GOC:TermGenie","PMID:23563483","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"betaine aldehyde metabolic process","termid":"GO:1902061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"betaine aldehyde catabolic process","synonyms":[{"name":"betaine aldehyde breakdown","type":"exact"},{"name":"betaine aldehyde catabolism","type":"exact"},{"name":"betaine aldehyde degradation","type":"exact"}],"termid":"GO:1902062"}


id: PBO:0069659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 936, pseudogene","termid":"PBO:0069659"}


id: PBO:0070333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 5","termid":"PBO:0070333"}


id: GO:0035425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling between cells of the same type. The signal produced by the signaling cell binds to a receptor on, and affects a cell of the same type.","definition_xrefs":["GOC:bf","ISBN:3527303782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"autocrine signaling","synonyms":[{"name":"autocrine signalling","type":"exact"}],"termid":"GO:0035425"}


id: GO:0018429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of copper into a 4Cu-S copper-sulfur cluster via heptakis-L-histidino tetracopper mu4-sulfide hydroxide.","definition_xrefs":["RESID:AA0298"],"gene_count":0,"genotype_count":0,"name":"obsolete copper incorporation into copper-sulfur cluster via heptakis-L-histidino tetracopper mu4-sulfide hydroxide (obsolete GO:0018429)","synonyms":[{"name":"copper incorporation into copper-sulphur cluster via heptakis-L-histidino tetracopper mu4-sulphide hydroxide","type":"exact"}],"termid":"GO:0018429"}


id: GO:0034762
data:
  {"annotated_genes":["SJAG_05346","SJAG_03631","SJAG_00296","SJAG_04551","SJAG_04990","SJAG_00991","SJAG_03970","SJAG_04920","SJAG_04469","SJAG_03591","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93050,115332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[89900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[89901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"},{"annotations":[104041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"},{"annotations":[91750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[112495,100754,95171,93581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[93582,95172,100755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[95173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[101272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"},{"annotations":[108321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902267"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03631":null,"SJAG_03970":null,"SJAG_04469":null,"SJAG_04551":null,"SJAG_04920":null,"SJAG_04990":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of membrane transport","type":"exact"}],"termid":"GO:0034762","terms_by_termid":{"GO:0035432":null,"GO:1902267":null,"GO:1905530":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905665":null,"GO:1905949":null,"GO:2000185":null}}


id: PBO:0059203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X10, pseudogene","termid":"PBO:0059203"}


id: GO:0008951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a palmitoleoyl-[acyl-carrier protein] + alpha-KDO-(2->4)-alpha-KDO-(2->6)-lipid IVA = KDO2-(palmitoleoyl)-lipid IVA + a holo-[acyl-carrier protein].","definition_xrefs":["MetaCyc:PALMITOTRANS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity","secondary_identifiers":["RHEA:44012"],"synonyms":[{"name":"palmitoleoyl ACP-dependent acyltransferase activity","type":"exact"}],"termid":"GO:0008951"}


id: PBO:0026871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_methylation_at_telomere","termid":"PBO:0026871"}


id: PBO:0044346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 30","termid":"PBO:0044346"}


id: GO:0018398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-phenylalanine to form L-3'-bromophenylalanine.","definition_xrefs":["RESID:AA0175"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine bromination to L-3'-bromophenylalanine (obsolete GO:0018398)","termid":"GO:0018398"}


id: MONDO:0016532
data:
  {"annotated_genes":["SJAG_04038","SJAG_02848","SJAG_01653","SJAG_02384"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87767,87766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014150"},{"annotations":[87084,87083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014598"}]},"cv_name":"mondo","definition":"Lennox-Gastaut syndrome (LGS) belongs to the group of severe childhood epileptic encephalopathies.","definition_xrefs":["Orphanet:2382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome with developmental and/or epileptic encephalopathy","termid":"MONDO:0800500"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01653":null,"SJAG_02384":null,"SJAG_02848":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"Lennox-Gastaut syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:230418006","UMLS:C0238111","MedDRA:10048816","MESH:D065768","GARD:9912","NANDO:2200879","DOID:0050561","icd11.foundation:651135242","MEDGEN:116044","NANDO:1200591","NCIT:C84816","NORD:1358","OMIM:606369"],"synonyms":[{"name":"LGS","type":"exact"},{"name":"Lennox syndrome","type":"exact"},{"name":"encephalopathy of childhood","type":"related"},{"name":"epileptic encephalopathy Lennox-Gastaut type","type":"related"},{"name":"macrocephaly and epileptic encephalopathy","type":"related"}],"termid":"MONDO:0016532","terms_by_termid":{"MONDO:0014150":null,"MONDO:0014598":null},"xrefs":{"Monarch":{"xref_id":"0016532"}}}


id: PBO:0049857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1","termid":"PBO:0049857"}


id: PBO:0089362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase","termid":"PBO:0089362"}


id: GO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within involuntary skeletal muscle tissue, resulting in a change in muscle geometry. This process occurs in the diaphragm. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The diaphragm is a striated muscle that is necessary for the process of respiratory gaseous exchange.","definition_xrefs":["PMID:12458206","GOC:mtg_muscle","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"involuntary skeletal muscle contraction","termid":"GO:0003011"},{"relation_name":"is_a","term_name":"respiratory system process","termid":"GO:0003016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diaphragm contraction","termid":"GO:0002086"}


id: _global:involved_in_or_involved_in_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of_or_within","termid":"_global:acts_upstream_of_or_within"},{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_or_involved_in_regulation_of","secondary_identifiers":["RO:0002431"],"termid":"_global:involved_in_or_involved_in_regulation_of"}


id: GO:0048207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport from the rough endoplasmic reticulum to the cis-Golgi.","definition_xrefs":["ISBN:0716731363","GOC:mah","PMID:10219233","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"part_of","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"vesicle targeting, rough ER to cis-Golgi","synonyms":[{"name":"rough ER to cis-Golgi targeting","type":"exact"},{"name":"rough endoplasmic reticulum to cis-Golgi targeting","type":"exact"},{"name":"vesicle targeting, rough endoplasmic reticulum to cis-Golgi","type":"exact"}],"termid":"GO:0048207"}


id: MONDO:0013250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 17p12-q11.2.","definition_xrefs":["DOID:0110531","PMID:19888295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 85","secondary_identifiers":["UMLS:C3160740","GARD:22635","OMIM:613392","MEDGEN:463629"],"synonyms":[{"name":"DFNB85","type":"narrow"},{"name":"autosomal recessive deafness 85","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 85","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 85","type":"narrow"},{"name":"deafness, autosomal recessive 85","type":"narrow"}],"termid":"MONDO:0013250","xrefs":{"Monarch":{"xref_id":"0013250"}}}


id: FYPO:0005221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oligomerization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0051259","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein oligomerization","synonyms":[{"name":"normal protein oligomerisation","type":"exact"},{"name":"normal protein oligomerization during mitotic cell cycle","type":"related"},{"name":"normal protein oligomerization during vegetative growth","type":"exact"}],"termid":"FYPO:0005221"}


id: PBO:0087307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small (67 amino acids) protein involved in sporulation; localizes to the prospore membrane; phosphorylated during meiosis; a longer, 5'-extended mRNA is also transcribed beginning in mid-meiosis, regulated by two MSEs (middle sporulation elements), and includes an uORF of 15 codons in its 5'-UTR; evidence transcription is regulated by Pdr1p","termid":"PBO:0087307"}


id: PBO:0028774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_sodium_nitroprusside","termid":"PBO:0028774"}


id: GO:0140955
data:
  {"annotated_genes":["SJAG_02873"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65267],"is_not":false,"summary":null,"term":"GO:0140955"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl36-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl36-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the lysine residue at position 36 of histone H3, producing histone H3K36me3.","definition_xrefs":["RHEA:60324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K36 methyltransferase activity","termid":"GO:0046975"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740","GO:0008276","GO:0140096"],"is_obsolete":false,"name":"histone H3K36 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.1.1.359"],"synonyms":[{"name":"histone H3-K36 trimethylation","type":"broad"},{"name":"histone H3K36 mono/di/trimethylase activity","type":"exact"},{"name":"histone H3K36 trimethylase activity","type":"exact"},{"name":"histone H3K36 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K36 specific)","type":"exact"}],"termid":"GO:0140955","terms_by_termid":{"GO:0140955":null}}


id: PBO:0043912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRLF3 pseudogene 2","termid":"PBO:0043912"}


id: PBO:0044119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 4","termid":"PBO:0044119"}


id: PBO:0059090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC2 antisense RNA 1","termid":"PBO:0059090"}


id: FYPO:0002347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly is abnormal.","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal stress granule assembly","termid":"FYPO:0007318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal stress granule assembly during vegetative growth","synonyms":[{"name":"abnormal cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"abnormal stress granule assembly during mitotic cell cycle","type":"related"},{"name":"abnormal stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0002347"}


id: PBO:0059742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 16","termid":"PBO:0059742"}


id: PR:Q02061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20856:SF7","OMA:SCHPO00333","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit RPB2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.01","secondary_identifiers":["UniProtKB:Q02061"],"synonyms":[{"name":"DNA-directed RNA polymerase II 138 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2B","type":"exact"}],"termid":"PR:Q02061"}


id: GO:0023010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the initiation of T cell receptor signaling.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of initiation of T cell receptor signaling (obsolete GO:0023010)","synonyms":[{"name":"regulation of initiation of T cell receptor signaling","type":"exact"},{"name":"regulation of initiation of T cell receptor signalling","type":"exact"}],"termid":"GO:0023010"}


id: GO:0005992
data:
  {"annotated_genes":["SJAG_01646","SJAG_01427","SJAG_00182","SJAG_00129","SJAG_01862","SJAG_01209","SJAG_01531"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62500,63247,65532,69369,69955,70764,110847],"is_not":false,"summary":null,"term":"GO:0005992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["ISBN:0028623819","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolic process","termid":"GO:0005991"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"trehalose biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"mycose biosynthesis","type":"exact"},{"name":"mycose biosynthetic process","type":"exact"},{"name":"mykose biosynthesis","type":"exact"},{"name":"mykose biosynthetic process","type":"exact"},{"name":"trehalose anabolism","type":"exact"},{"name":"trehalose biosynthesis","type":"exact"},{"name":"trehalose formation","type":"exact"},{"name":"trehalose synthesis","type":"exact"}],"termid":"GO:0005992","terms_by_termid":{"GO:0005992":null}}


id: GO:0071381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin F stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin F","termid":"GO:0034696"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin F stimulus","termid":"GO:0071381"}


id: PBO:0049718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 4","termid":"PBO:0049718"}


id: PBO:0088010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p; shuttles between cytosol and nucleus; mediates delivery of misfolded proteins into the nucleus for degradation; involved in proteasomal degradation of misfolded cytosolic proteins; protein abundance increases in response to DNA replication stress; polyQ aggregates sequester Sis1p and interfere with clearance of misfolded proteins; similar to bacterial DnaJ proteins and mammalian DnaJB1","termid":"PBO:0088010"}


id: PATO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000837 auditory threshold value (obsolete PATO:0000837)","termid":"PATO:0000837"}


id: GO:0018122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to peptidyl-asparagine to form peptidyl-N4-(ADP-ribosyl)-L-asparagine.","definition_xrefs":["RESID:AA0231"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine ADP-ribosylation (obsolete GO:0018122)","termid":"GO:0018122"}


id: GO:0010396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhamnogalacturonan II, a low molecular mass (5-10KDa) pectic polysaccharide. The backbone of RG-II contains at least 8 1,4-linked alpha-D-GalpA residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonan metabolic process","termid":"GO:0010393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan II metabolic process","synonyms":[{"name":"rhamnogalacturonan II metabolism","type":"exact"}],"termid":"GO:0010396"}


id: FYPO:0008315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial ribosome assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial ribosome assembly","termid":"FYPO:0008315"}


id: PBO:0050258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 36","termid":"PBO:0050258"}


id: MONDO:0011627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 5","secondary_identifiers":["OMIM:606053","UMLS:C1853755","MEDGEN:340048"],"synonyms":[{"name":"AUTS5","type":"exact"},{"name":"autism, susceptibility to, 5","type":"exact"},{"name":"autism-related speech delay","type":"related"},{"name":"intellectual developmental disorder with autism and speech delay","type":"exact"},{"name":"phrase speech delay, autism-related","type":"related"}],"termid":"MONDO:0011627","xrefs":{"Monarch":{"xref_id":"0011627"}}}


id: GO:0004261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity similar to chymotrypsin C.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin G activity (obsolete GO:0004261)","synonyms":[{"name":"cathepsin G activity","type":"exact"},{"name":"chymotrypsin-like proteinase activity","type":"related"},{"name":"neutral proteinase activity","type":"related"}],"termid":"GO:0004261"}


id: GO:0030326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping.","definition_xrefs":["GOC:bf","GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb morphogenesis","termid":"GO:0035108"},{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic limb morphogenesis","termid":"GO:0030326"}


id: GO:0046165
data:
  {"annotated_genes":["SJAG_04018","SJAG_02406","SJAG_02305","SJAG_00717","SJAG_02982","SJAG_04282","SJAG_02044","SJAG_03750","SJAG_00554","SJAG_02420","SJAG_01012","SJAG_03715","SJAG_04954","SJAG_04866","SJAG_00409","SJAG_04842","SJAG_02734","SJAG_02163","SJAG_03235","SJAG_03509","SJAG_03409","SJAG_00321","SJAG_04178","SJAG_03362","SJAG_04067","SJAG_02706","SJAG_01057","SJAG_00413","SJAG_04270","SJAG_03024","SJAG_03739","SJAG_02429","SJAG_03531","SJAG_03743","SJAG_03598","SJAG_02321","SJAG_04810","SJAG_03929","SJAG_03538","SJAG_02719","SJAG_00880","SJAG_01970","SJAG_02855","SJAG_00770","SJAG_03098","SJAG_00827","SJAG_01148","SJAG_00624","SJAG_02104","SJAG_00370","SJAG_00381","SJAG_01307","SJAG_02421","SJAG_01474","SJAG_04499","SJAG_00453","SJAG_03018","SJAG_03249","SJAG_00244","SJAG_03275","SJAG_04217"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73237,72914,75635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[101893,76193,73813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[76063,112037,78262,75718,72661,73494,90289,117213,67090,81915,74912,82101,82127,91483,109778,109463,111194,118529,71587,73280,77905,78270,96489,78999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[63810,70816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[67151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006021"},{"annotations":[77278,76540,58608,95222,72965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[95726],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[111803],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[90859,115655],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[77258],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[107761,90379],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"},{"annotations":[111667,80704,98774,107915,75454,78624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[71620,110463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"},{"annotations":[75746,78782,80238,62132,71801,75688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[112402,101406,112401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"small molecule biosynthetic 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biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"alcohol anabolism","type":"exact"},{"name":"alcohol biosynthesis","type":"exact"},{"name":"alcohol formation","type":"exact"},{"name":"alcohol synthesis","type":"exact"}],"termid":"GO:0046165","terms_by_termid":{"GO:0000949":null,"GO:0006021":null,"GO:0006114":null,"GO:0006696":null,"GO:0006729":null,"GO:0009228":null,"GO:0010895":null,"GO:0019408":null,"GO:0032443":null,"GO:0032958":null,"GO:0036172":null,"GO:0045540":null,"GO:0046512":null,"GO:0070452":null,"GO:0090180":null}}


id: PBO:0016079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane organization protein Fhn1","termid":"PBO:0016079"}


id: MONDO:0008958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated Klippel-Feil syndrome in which the cause of the disease is a mutation in the MEOX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Klippel-Feil syndrome","termid":"MONDO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Klippel-Feil syndrome 2, autosomal recessive","secondary_identifiers":["MESH:C536888","UMLS:C1859209","OMIM:214300","DOID:0080590","GARD:15151","MEDGEN:395201"],"synonyms":[{"name":"KFS2","type":"related"},{"name":"Kfs, autosomal recessive","type":"related"},{"name":"Klippel-FEIL syndrome 2, autosomal recessive","type":"related"},{"name":"Klippel-Feil syndrome 2, autosomal recessive","type":"exact"},{"name":"MEOX1 isolated Klippel-Feil syndrome","type":"exact"},{"name":"cervical vertebral fusion, autosomal recessive","type":"related"},{"name":"isolated Klippel-Feil syndrome caused by mutation in MEOX1","type":"exact"}],"termid":"MONDO:0008958","xrefs":{"Monarch":{"xref_id":"0008958"}}}


id: PBO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Swi6","termid":"PBO:0001130"}


id: PBO:0053427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 370","termid":"PBO:0053427"}


id: GO:0048209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or destination of vesicle-mediated transport to, from or within the Golgi apparatus.","definition_xrefs":["GOC:jid","ISBN:0716731363","GOC:mah","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle targeting, to, from or within Golgi","synonyms":[{"name":"regulation of Golgi vesicle targeting","type":"exact"}],"termid":"GO:0048209"}


id: GO:2000375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oxygen metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of oxygen metabolic process","termid":"GO:2000374"},{"relation_name":"negatively_regulates","term_name":"oxygen metabolic process","termid":"GO:0072592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxygen metabolic process","synonyms":[{"name":"negative regulation of diatomic oxygen metabolic process","type":"exact"},{"name":"negative regulation of oxygen metabolism","type":"exact"}],"termid":"GO:2000375"}


id: FYPO:0009083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of lithium chloride and methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to lithium chloride and methyl methanesulfonate","synonyms":[{"name":"resistance to lithium chloride and MMS","type":"exact"},{"name":"resistance to lithium chloride and MMS during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and MMS in combination","type":"exact"},{"name":"resistance to lithium chloride and methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to lithium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and methyl methanesulfonate in combination","type":"exact"},{"name":"resistant to lithium chloride and MMS","type":"exact"},{"name":"resistant to lithium chloride and methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009083"}


id: MONDO:0957984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 2j","secondary_identifiers":["MEDGEN:1846005","OMIM:620635","UMLS:C5882725"],"termid":"MONDO:0957984","xrefs":{"Monarch":{"xref_id":"0957984"}}}


id: PBO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent duplication","termid":"PBO:0000148"}


id: FYECO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which oleic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ oleic acid","termid":"FYECO:0000049"}


id: PBO:0078191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-1","termid":"PBO:0078191"}


id: GO:0005514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium ion storage activity (obsolete GO:0005514)","synonyms":[{"name":"calcium ion storage activity","type":"exact"}],"termid":"GO:0005514"}


id: PBO:0047222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 226 member B","termid":"PBO:0047222"}


id: GO:0015786
data:
  {"annotated_genes":["SJAG_04406","SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76817],"is_not":false,"summary":null,"term":"GO:0015786"},{"annotations":[114341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"}]},"cv_name":"biological_process","definition":"The process in which UDP-glucose is transported across a membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04162":null,"SJAG_04406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"UDP-glucose transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015786","terms_by_termid":{"GO:0015786":null,"GO:0120112":null}}


id: FYPO:0001882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of one or more enzymes that degrades cell wall polysaccharides than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cell wall-degrading enzymes","synonyms":[{"name":"resistance to Lyticase","type":"narrow"},{"name":"resistance to Novozyme 234","type":"narrow"},{"name":"resistance to Zymolyase","type":"narrow"},{"name":"resistance to cell wall-degrading enzymes during mitotic cell cycle","type":"related"},{"name":"resistance to cell wall-degrading enzymes during vegetative growth","type":"exact"},{"name":"resistant to cell wall-degrading enzymes","type":"exact"}],"termid":"FYPO:0001882"}


id: PBO:0030771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0030771"}


id: MONDO:0014166
data:
  {"annotated_genes":["SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87776],"is_not":false,"summary":null,"term":"MONDO:0014166"}]},"cv_name":"mondo","definition":"Any paroxysmal nocturnal hemoglobinuria in which the cause of the disease is a mutation in the PIGT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal nocturnal hemoglobinuria","termid":"MONDO:0100244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066","MONDO:0005240","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"paroxysmal nocturnal hemoglobinuria 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3809369","OMIM:615399","MEDGEN:815699","GARD:15958"],"synonyms":[{"name":"PIGT paroxysmal nocturnal hemoglobinuria","type":"exact"},{"name":"PNH2","type":"related"},{"name":"paroxysmal nocturnal hemoglobinuria 2","type":"exact"},{"name":"paroxysmal nocturnal hemoglobinuria 2, autosomal dominant, somatic mutation","type":"exact"},{"name":"paroxysmal nocturnal hemoglobinuria caused by mutation in PIGT","type":"exact"},{"name":"paroxysmal nocturnal hemoglobinuria type 2","type":"exact"}],"termid":"MONDO:0014166","terms_by_termid":{"MONDO:0014166":null},"xrefs":{"Monarch":{"xref_id":"0014166"}}}


id: GO:0036174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butane + O2 + NAD(P)H + H+ = butanol + NAD(P)+ + H2O.","definition_xrefs":["GOC:dh","PMID:17526838","PMID:19383682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"butane monooxygenase activity","synonyms":[{"name":"sBMO","type":"related"},{"name":"soluble butane monooxygenase","type":"related"}],"termid":"GO:0036174"}


id: FYPO:0007911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of GTP-bound protein measured in the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PMID:19189958","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased level of GTP-bound protein","termid":"FYPO:0007911"}


id: PBO:0011164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex subunit, GTPase regulator Vps3 (predicted)","termid":"PBO:0011164"}


id: PBO:0049540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 4","termid":"PBO:0049540"}


id: MONDO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsia conorii infectious disease","termid":"MONDO:0005677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Far eastern spotted fever","secondary_identifiers":["MEDGEN:759467","DOID:0050046","UMLS:C3532354","SCTID:472822008"],"synonyms":[{"name":"Rickettsia heilongjiangensis spotted fever","type":"exact"}],"termid":"MONDO:0000231","xrefs":{"Monarch":{"xref_id":"0000231"}}}


id: PBO:0046030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2D","termid":"PBO:0046030"}


id: PBO:0089267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nsa2","termid":"PBO:0089267"}


id: SO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recombination signal including V-heptamer, V-spacer and V-nonamer in 3' of V-region of a V-gene or V-sequence of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_gene_recombination_feature","synonyms":[{"name":"V gene recombination feature","type":"exact"},{"name":"V-RS","type":"exact"}],"termid":"SO:0000538"}


id: MONDO:0022755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"monosomy","termid":"MONDO:0020639"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 mosaic monosomy","secondary_identifiers":["MEDGEN:419755","UMLS:C2931250","MESH:C536581"],"synonyms":[{"name":"Mosaic monosomy 18","type":"related"},{"name":"Mosaic monosomy chromosome 18","type":"related"},{"name":"monosomy 18 mosaicism","type":"related"}],"termid":"MONDO:0022755","xrefs":{"Monarch":{"xref_id":"0022755"}}}


id: MONDO:0007098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cerebral hemorrhage with amyloidosis (HCHWA), Icelandic type is a form of HCHWA characterized by an age of onset of 20-30 years, systemic amyloidosis and recurrent lobar intracerebral hemorrhages.","definition_xrefs":["Orphanet:100008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy","termid":"MONDO:0005620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"ACys amyloidosis","secondary_identifiers":["ICD10EXP:E85.4+","GARD:16930","UMLS:C1527338","DOID:0070027","ICD9:277.39","MEDGEN:279656","ICD10EXP:I68.0*","ICD9:437.8","OMIM:105150","SCTID:703220002"],"synonyms":[{"name":"CST3-related amyloidosis","type":"exact"},{"name":"CST3-related cerebral amyloid angiopathy","type":"related"},{"name":"HCHWA, Icelandic type","type":"exact"},{"name":"amyloidosis 6","type":"related"},{"name":"amyloidosis VI","type":"exact"},{"name":"amyloidosis, Cerebroarterial, Icelandic type","type":"exact"},{"name":"cerebral amyloid angiopathy","type":"broad"},{"name":"cerebral amyloid angiopathy, CST3-related","type":"related"},{"name":"cerebral hemorrhage, hereditary, with amyloidosis","type":"exact"},{"name":"cystatin amyloidosis","type":"exact"},{"name":"hereditary cerebral haemorrhage with amyloidosis","type":"exact"},{"name":"hereditary cerebral haemorrhage with amyloidosis, Icelandic type","type":"exact"},{"name":"hereditary cerebral hemorrhage with amyloidosis","type":"exact"},{"name":"hereditary cerebral hemorrhage with amyloidosis, Icelandic type","type":"exact"},{"name":"hereditary cystatin C amyloid angiopathy","type":"exact"}],"termid":"MONDO:0007098","xrefs":{"Monarch":{"xref_id":"0007098"}}}


id: PBO:0016582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complememtnation, functionally complements S. cerevisiae YOR330C","termid":"PBO:0016582"}


id: GO:1905091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type 2 mitophagy.","definition_xrefs":["PMID:25009776","GOC:vw","PMID:26942284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitophagy","termid":"GO:1901526"},{"relation_name":"is_a","term_name":"regulation of type 2 mitophagy","termid":"GO:1905089"},{"relation_name":"positively_regulates","term_name":"type 2 mitophagy","termid":"GO:0061734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of type 2 mitophagy","synonyms":[{"name":"activation of parkin-mediated mitophagy in response to mitochondrial depolarization","type":"narrow"},{"name":"positive regulation of PRKN-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"positive regulation of Park2-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"positive regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"}],"termid":"GO:1905091"}


id: GO:1990006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic membrane-bounded vesicle first described in dendrites, categorized by smooth membranes, electron-lucent interiors and irregular shapes. Sometimes occurs in clumps. Amorphous vesicles have been found to contain material taken up from the extracellular space, therefore suggesting that they may be part of the endosomal pathway.","definition_xrefs":["PMID:11896161","NIF_Subcellular:sao1531915298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amorphous vesicle","termid":"GO:1990006"}


id: MONDO:0011314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Graves disease","termid":"MONDO:0005364"},{"relation_name":"is_a","term_name":"autoimmune thyroid disease, susceptibility to","termid":"MONDO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Graves disease, susceptibility to, 2","secondary_identifiers":["OMIM:603388","UMLS:C1863923","MEDGEN:350301"],"synonyms":[{"name":"Graves disease, susceptibility to, 2","type":"exact"},{"name":"Graves disease, susceptibility to, type 2","type":"exact"},{"name":"Grd2","type":"related"}],"termid":"MONDO:0011314","xrefs":{"Monarch":{"xref_id":"0011314"}}}


id: PBO:0071185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 26","termid":"PBO:0071185"}


id: SO:0000636
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Snall nuclear RNAs that are incorporated into the pre-mRNAs to replace the 5' end in some eukaryotes.","definition_xrefs":["PMID:24130571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"},{"relation_name":"part_of","term_name":"mini_exon_donor_RNA","termid":"SO:0000635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliced_leader_RNA","synonyms":[{"name":"mini-exon","type":"related"},{"name":"spliced leader RNA","type":"exact"}],"termid":"SO:0000636"}


id: PBO:0085046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential nuclear protein; null mutation has global effects on transcription; VHR2 has a paralog, VHR1, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085046"}


id: MONDO:0014995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, seizures, and absent language","secondary_identifiers":["OMIM:617268","MEDGEN:934610","UMLS:C4310643"],"synonyms":[{"name":"NDHSAL","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia, seizures, and absent language","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia, seizures, and absent language; NDHSAL","type":"exact"}],"termid":"MONDO:0014995","xrefs":{"Monarch":{"xref_id":"0014995"}}}


id: PBO:0064670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 5","termid":"PBO:0064670"}


id: PBO:0011965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type(predicted)","termid":"PBO:0011965"}


id: PBO:0043881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB/ATF bZIP transcription factor","termid":"PBO:0043881"}


id: PBO:0036507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate kinase Kcs1 (predicted)","termid":"PBO:0036507"}


id: PBO:0061146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 family member 9","termid":"PBO:0061146"}


id: PBO:0076814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 2","termid":"PBO:0076814"}


id: PBO:0065733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 4","termid":"PBO:0065733"}


id: MONDO:1010270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alkaptonuria that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaptonuria, non-human animal","secondary_identifiers":["OMIA:001243"],"termid":"MONDO:1010270","xrefs":{"Monarch":{"xref_id":"1010270"}}}


id: GO:0052102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the host calcium-dependent protein kinase pathway during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of defense-related host calcium-dependent protein kinase pathway (obsolete GO:0052102)","synonyms":[{"name":"activation by symbiont of defense-related host calcium-dependent protein kinase pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related calcium-dependent protein kinase pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation of defense-related host CDPK pathway by organism","type":"exact"},{"name":"stimulation by symbiont of defense-related host calcium-dependent protein kinase pathway","type":"narrow"},{"name":"up regulation by symbiont of defense-related host calcium-dependent protein kinase pathway","type":"exact"},{"name":"up-regulation by symbiont of defense-related host calcium-dependent protein kinase pathway","type":"exact"},{"name":"upregulation by symbiont of defense-related host calcium-dependent protein kinase pathway","type":"exact"}],"termid":"GO:0052102"}


id: PBO:0064737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 73","termid":"PBO:0064737"}


id: PBO:0063415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 2A","termid":"PBO:0063415"}


id: FYPO:0002765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of tRNA (guanine(9)-N(1))-methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased tRNA methyltransferase activity","termid":"FYPO:0001772"},{"relation_name":"is_a","term_name":"abnormal tRNA (guanine(9)-N(1))-methyltransferase activity","termid":"FYPO:0002763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased tRNA (guanine(9)-N(1))-methyltransferase activity","synonyms":[{"name":"reduced tRNA (guanine(9)-N(1))-methyltransferase activity","type":"exact"}],"termid":"FYPO:0002765"}


id: PBO:0027365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_mononucleate_vegetative_cell","termid":"PBO:0027365"}


id: FYPO:0005611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 occurs to a greater extent than normal in the region of a chromosome at which a DNA double-strand break has occurred.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased H4-K20 dimethylation at double-strand break site during vegetative growth","synonyms":[{"name":"increased H4-K20 dimethylation at DSB during vegetative growth","type":"exact"},{"name":"increased H4K20me2 at double-strand break site during vegetative growth","type":"exact"},{"name":"increased histone H4-K20 dimethylation at double-strand break site during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K20 dimethylation at double-strand break site during vegetative growth","type":"exact"},{"name":"increased histone H4-K20 dimethylation at site of double-strand break during vegetative growth","type":"exact"},{"name":"increased histone lysine H4-K20 dimethylation at double-strand break site during vegetative growth","type":"exact"}],"termid":"FYPO:0005611"}


id: MONDO:0002483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant tumor that arises from the breast and originates from or is composed of myoepithelial cells. Representative examples include adenomyoepithelioma, myoepitheliosis, and malignant myoepithelioma.","definition_xrefs":["NCIT:C40389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoepithelial tumor","termid":"MONDO:0002380"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast myoepithelial tumor","secondary_identifiers":["DOID:3004","UMLS:C1511319","MEDGEN:267411"],"synonyms":[{"name":"breast myoepithelial neoplasm","type":"exact"},{"name":"breast myoepithelial tumor","type":"exact"}],"termid":"MONDO:0002483","xrefs":{"Monarch":{"xref_id":"0002483"}}}


id: MONDO:0020352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple system atrophy, parkinsonian type (MSA-p) is a form of multiple system atrophy (MSA) with predominant parkinsonian features (bradykinesia, rigidity, irregular jerky postural tremor, and postural instability).","definition_xrefs":["Orphanet:98933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"multiple system atrophy, parkinsonian type","secondary_identifiers":["GARD:19604","ICD10CM:G23.2","UMLS:C5554235","NANDO:1200036","icd11.foundation:296753000","MEDGEN:1842393"],"synonyms":[{"name":"MSA, parkinsonian type","type":"exact"},{"name":"MSA-p","type":"exact"}],"termid":"MONDO:0020352","xrefs":{"Monarch":{"xref_id":"0020352"}}}


id: PBO:0063298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily C, 5","termid":"PBO:0063298"}


id: GO:1902494
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id: MONDO:0030895
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id: GO:0033020
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id: PBO:0116616
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id: GO:0102936
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id: PBO:0005158
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id: GO:0010961
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id: PR:O74804
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id: GO:1900191
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id: PBO:0049697
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id: GO:0045729
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id: PBO:0086652
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id: MOD:00000
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id: MONDO:1010234
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id: PBO:0044335
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 18","termid":"PBO:0044335"}


id: GO:1901213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the development of the heart over time.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901213)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"}],"termid":"GO:1901213"}


id: GO:0033263
data:
  {"annotated_genes":["SJAG_01598","SJAG_04966","SJAG_00204","SJAG_05194","SJAG_02315","SJAG_03005"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71017,73710,91997,102192,118878,120435],"is_not":false,"summary":null,"term":"GO:0033263"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex that acts as an endosomal tethering complex (CORVET = class C core vacuole/endosome tethering) by cooperating with Rab GTPases to capture endosomal vesicles and trap them prior to the action of SNAREs; the complex is involved in endo-lysosomal biogenesis and required for transport between endosome and vacuole. The Saccharomyces cerevisiae complex contains Vps8p, Vps3p, Pep5p, Vps16p, Pep3p, and Vps33p.","definition_xrefs":["PMID:17488625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_01598":null,"SJAG_02315":null,"SJAG_03005":null,"SJAG_04966":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0005575","GO:0031410","GO:0032991"],"is_obsolete":false,"name":"CORVET complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0033263","terms_by_termid":{"GO:0033263":null}}


id: GO:0010946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic joint molecule formation. Meiotic joint molecule formation is the conversion of the paired broken DNA and homologous duplex DNA into a four-stranded branched intermediate, known as a joint molecule, formed during meiotic recombination.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic joint molecule formation","termid":"GO:0000709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of meiotic joint molecule formation","termid":"GO:0010946"}


id: GO:0102824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-7-olate + UDP-L-rhamnose = H+ + quercetin 3-O-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-L-rhamnose:quercetin 3-O-rhamnosyltransferase activity (obsolete GO:0102824)","termid":"GO:0102824"}


id: GO:0015233
data:
  {"annotated_genes":["SJAG_05175"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74220],"is_not":false,"summary":null,"term":"GO:0015233"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of pantothenate across a membrane. Pantothenate is the anion of pantothenic acid, the amide of beta-alanine and pantoic acid; it is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.","definition_xrefs":["GOC:ai","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"pantothenate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pantothenate transporter activity","type":"broad"},{"name":"vitamin B5 transmembrane transporter activity","type":"exact"}],"termid":"GO:0015233","terms_by_termid":{"GO:0015233":null}}


id: MONDO:0009730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nephrosialidosis (obsolete MONDO:0009730)","termid":"MONDO:0009730","xrefs":{"Monarch":{"xref_id":"0009730"}}}


id: GO:0018658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylate + NADH + H+ + O2 = catechol + NAD+ + H2O + CO2.","definition_xrefs":["EC:1.14.13.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"salicylate 1-monooxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:r0340","MetaCyc:SALICYLATE-1-MONOOXYGENASE-RXN","RHEA:11004"],"synonyms":[{"name":"salicylate 1-hydroxylase activity","type":"related"},{"name":"salicylate hydroxylase (decarboxylating)","type":"related"},{"name":"salicylate hydroxylase activity","type":"exact"},{"name":"salicylate monooxygenase activity","type":"related"},{"name":"salicylate,NADH:oxygen oxidoreductase (1-hydroxylating, decarboxylating)","type":"related"},{"name":"salicylic hydroxylase activity","type":"related"}],"termid":"GO:0018658"}


id: PR:Q9URW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An SH3 domain-containing YSC84-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00284","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain-containing protein PJ696.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ696.02","secondary_identifiers":["UniProtKB:Q9URW6"],"synonyms":[{"name":"Spom972h-SH3YL1","type":"exact"}],"termid":"PR:Q9URW6"}


id: PBO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae PN uptake is mediated by the unrelated transporter Tpn1p","termid":"PBO:0002112"}


id: SO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000503 alternately_spliced_gene_encodeing_one_transcript (obsolete SO:0000503)","termid":"SO:0000503"}


id: GO:1905886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any chromatin remodeling that is involved in meiosis I.","definition_xrefs":["GOC:TermGenie","PMID:25934010","PMID:19139281","GO_REF:0000060","PMID:9106659"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin remodeling involved in meiosis I (obsolete GO:1905886)","synonyms":[{"name":"chromatin modeling involved in meiosis I","type":"exact"},{"name":"chromatin modelling involved in meiosis I","type":"exact"},{"name":"chromatin remodelling involved in meiosis I","type":"exact"},{"name":"meiosis-specific chromatin remodeling","type":"exact"}],"termid":"GO:1905886"}


id: PBO:0111857
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 family co-repressor","termid":"PBO:0111857"}


id: PBO:0057408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548j","termid":"PBO:0057408"}


id: PATO:0001155
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001155 absolute concentration (obsolete PATO:0001155)","termid":"PATO:0001155"}


id: GO:0036226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of deprivation of glucose.","definition_xrefs":["GOC:mah","PMID:958201","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cell cycle arrest in response to glucose starvation (obsolete GO:0036226)","synonyms":[{"name":"cell cycle arrest in response to glucose starvation","type":"broad"}],"termid":"GO:0036226"}


id: PBO:0116644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2","termid":"PBO:0116644"}


id: GO:0005139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-7 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-7 receptor binding","synonyms":[{"name":"IL-7","type":"narrow"},{"name":"interleukin-7 receptor ligand","type":"narrow"}],"termid":"GO:0005139"}


id: GO:0045433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during wing vibration where the male insect produces a species-specific acoustic signal called a love song.","definition_xrefs":["PMID:11092827","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"},{"relation_name":"part_of","term_name":"male courtship behavior, veined wing vibration","termid":"GO:0016545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, veined wing generated song production","synonyms":[{"name":"male courtship behavior, song production","type":"broad"},{"name":"male courtship behaviour, song production","type":"broad"},{"name":"male courtship behaviour, veined wing generated song production","type":"exact"}],"termid":"GO:0045433"}


id: GO:2000798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amniotic stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesenchymal stem cell differentiation","termid":"GO:2000740"},{"relation_name":"is_a","term_name":"regulation of amniotic stem cell differentiation","termid":"GO:2000797"},{"relation_name":"negatively_regulates","term_name":"amniotic stem cell differentiation","termid":"GO:0097086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amniotic stem cell differentiation","termid":"GO:2000798"}


id: GO:0000348
data:
  {"annotated_genes":["SJAG_00249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120730],"is_not":false,"summary":null,"term":"GO:0000348"}]},"cv_name":"biological_process","definition":"Recognition of the pre-mRNA branch site sequence by components of the assembling spliceosome.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"mRNA branch site recognition","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000370","GO:0000371"],"synonyms":[{"name":"U12-type nuclear mRNA branch site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA branch site recognition","type":"narrow"},{"name":"nuclear mRNA branch site recognition","type":"exact"},{"name":"spliceosomal A complex biosynthesis","type":"narrow"},{"name":"spliceosomal A complex formation","type":"narrow"},{"name":"spliceosomal B complex biosynthesis","type":"narrow"},{"name":"spliceosomal B complex formation","type":"narrow"}],"termid":"GO:0000348","terms_by_termid":{"GO:0000348":null}}


id: GO:0060041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.","definition_xrefs":["GOC:bf","GOC:dph","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina development in camera-type eye","secondary_identifiers":["GO:0002073"],"synonyms":[{"name":"retina development in camera-style eye","type":"exact"},{"name":"retinal development","type":"related"}],"termid":"GO:0060041"}


id: PR:O74468
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A siroheme synthase cysG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04916","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III C-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.06c","secondary_identifiers":["UniProtKB:O74468"],"synonyms":[{"name":"Spom972h-cysG","type":"exact"}],"termid":"PR:O74468"}


id: PBO:0051837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunity related GTPase M","termid":"PBO:0051837"}


id: MONDO:0013957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic variant of Mendelian susceptibility to mycobacterial diseases characterized by a selective susceptibility to relatively mild infections with bacillus Calmette-Guerin (BCG).","definition_xrefs":["Orphanet:319600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to partial IRF8 deficiency","secondary_identifiers":["MEDGEN:814919","DOID:0111986","UMLS:C3808589","OMIM:614893"],"synonyms":[{"name":"CD11c-positive/CD1c-positive Dendritic cell deficiency, autosomal dominant","type":"related"},{"name":"IMD32A","type":"related"},{"name":"IRF8 autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"IRF8 deficiency, autosomal dominant","type":"related"},{"name":"MSMD due to partial IRF8 deficiency","type":"exact"},{"name":"MSMD due to partial interferon regulatory factor 8 deficiency","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial diseases due to partial interferon regulatory factor 8 deficiency","type":"exact"},{"name":"autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in IRF8","type":"exact"},{"name":"immunodeficiency 32A","type":"related"},{"name":"immunodeficiency 32A, Mycobacteriosis, autosomal dominant","type":"related"},{"name":"immunodeficiency type 32A","type":"exact"}],"termid":"MONDO:0013957","xrefs":{"Monarch":{"xref_id":"0013957"}}}


id: MONDO:0033493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary gingival fibromatosis","termid":"MONDO:0016070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, 5","secondary_identifiers":["MEDGEN:1624392","GARD:18357","DOID:0080280","UMLS:C4539942","OMIM:617626"],"synonyms":[{"name":"GGF5","type":"related"},{"name":"GINGF5","type":"related"},{"name":"fibromatosis, gingival, 5","type":"exact"},{"name":"fibromatosis, gingival, hereditary, 5","type":"related"},{"name":"gingival fibromatosis 5","type":"related"}],"termid":"MONDO:0033493","xrefs":{"Monarch":{"xref_id":"0033493"}}}


id: PBO:0063246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 11","termid":"PBO:0063246"}


id: PBO:0026800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proteasome_core_complex_binding","termid":"PBO:0026800"}


id: PBO:0117141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEPSIN antisense RNA 1","termid":"PBO:0117141"}


id: GO:0046562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose + O2 = D-glucono-1,5-lactone + H2O2.","definition_xrefs":["RHEA:11428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose oxidase activity","termid":"GO:0047979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-D-glucose oxidase activity","secondary_identifiers":["EC:1.1.3.4","KEGG_REACTION:R01522","MetaCyc:GLUCOSE-OXIDASE-RXN"],"synonyms":[{"name":"D-glucose oxidase activity","type":"related"},{"name":"D-glucose-1-oxidase activity","type":"related"},{"name":"GOD activity","type":"related"},{"name":"beta-D-glucose:oxygen 1-oxido-reductase activity","type":"related"},{"name":"beta-D-glucose:oxygen 1-oxidoreductase activity","type":"related"},{"name":"beta-D-glucose:quinone oxidoreductase activity","type":"related"},{"name":"corylophyline","type":"related"},{"name":"deoxin-1","type":"related"},{"name":"glucose aerodehydrogenase activity","type":"related"},{"name":"glucose oxidase activity","type":"exact"},{"name":"glucose oxyhydrase activity","type":"related"},{"name":"microcid","type":"related"},{"name":"penatin","type":"related"}],"termid":"GO:0046562"}


id: GO:0051286
data:
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id: PBO:0119644
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id: PBO:0017679
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id: MONDO:0024285
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id: PBO:0057105
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id: MONDO:0007698
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id: MONDO:0023041
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id: MONDO:0020337
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id: MONDO:0004553
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id: SO:0000362
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id: GO:1902822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of late endosome to lysosome transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:pad","GOC:PARL","PMID:23949442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"regulates","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of late endosome to lysosome transport","synonyms":[{"name":"regulation of prevacuolar compartment to lysosome transport","type":"broad"}],"termid":"GO:1902822"}


id: MONDO:0006020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Zollinger-Ellison syndrome (obsolete MONDO:0006020)","synonyms":[{"name":"obsolete Zollinger-Ellison syndrome (disease)","type":"exact"}],"termid":"MONDO:0006020","xrefs":{"Monarch":{"xref_id":"0006020"}}}


id: GO:2001248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ammonia assimilation cycle.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitrogen utilization","termid":"GO:0006808"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"regulates","term_name":"ammonia assimilation cycle","termid":"GO:0019676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of ammonia assimilation cycle","synonyms":[{"name":"regulation of glutamate metabolic process via glutamine and ammonia","type":"exact"},{"name":"regulation of glutamate metabolism via glutamine and ammonia","type":"exact"}],"termid":"GO:2001248"}


id: GO:0045772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases autophagosome size.","definition_xrefs":["GOC:autophagy","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagosome size","termid":"GO:0016243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of autophagosome size","synonyms":[{"name":"activation of autophagic vacuole size","type":"narrow"},{"name":"positive regulation of autophagic vacuole size","type":"exact"},{"name":"stimulation of autophagic vacuole size","type":"narrow"},{"name":"up regulation of autophagic vacuole size","type":"exact"},{"name":"up-regulation of autophagic vacuole size","type":"exact"},{"name":"upregulation of autophagic vacuole size","type":"exact"}],"termid":"GO:0045772"}


id: PBO:0052679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 47","termid":"PBO:0052679"}


id: GO:0034549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-cyclopropylammelide + H2O = cyclopropylamine + cyanuric acid.","definition_xrefs":["UM-BBD_reactionID:r0827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"N-cyclopropylammelide alkylamino hydrolase activity","secondary_identifiers":["KEGG_REACTION:R06972","MetaCyc:RXN-8020"],"termid":"GO:0034549"}


id: MONDO:1011791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial myopathy, non-human animal","secondary_identifiers":["OMIA:000695"],"termid":"MONDO:1011791","xrefs":{"Monarch":{"xref_id":"1011791"}}}


id: GO:0043592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outermost layer of a bacterial endospore, which is loosely attached and located outside of the endospore coat. It is generally composed of protein, carbohydrate, and perhaps lipid.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endospore external encapsulating structure","termid":"GO:0043591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"exosporium","synonyms":[{"name":"epispore","type":"related"},{"name":"exospore","type":"related"},{"name":"perispore","type":"related"}],"termid":"GO:0043592"}


id: MONDO:0042924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Vagneur-Triolle-Ripert syndrome (obsolete MONDO:0042924)","synonyms":[{"name":"Vagneur Triolle Ripert syndrome","type":"related"},{"name":"hypertelorism, short midface, arachnodactyly, coloboma of iris and delayed bone age","type":"related"}],"termid":"MONDO:0042924","xrefs":{"Monarch":{"xref_id":"0042924"}}}


id: MONDO:0016900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial deletion of the long arm of chromosome 1 (obsolete MONDO:0016900)","termid":"MONDO:0016900","xrefs":{"Monarch":{"xref_id":"0016900"}}}


id: PBO:0074122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC30A6 divergent transcript","termid":"PBO:0074122"}


id: MONDO:1012870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any heart disorder characterized by pathologically prolonged ventricular action potential duration that occurs in rabbits due to a mutation in the KCNE1 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:27076034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long QT syndrome, KCNE1-related, rabbit","secondary_identifiers":["OMIA:002334-9986"],"termid":"MONDO:1012870","xrefs":{"Monarch":{"xref_id":"1012870"}}}


id: GO:0017197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal proline of proteins to form the derivative N-acetyl-L-proline.","definition_xrefs":["RESID:AA0050"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-proline acetylation (obsolete GO:0017197)","termid":"GO:0017197"}


id: MONDO:0010915
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88561,88562],"is_not":false,"summary":null,"term":"MONDO:0010915"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYH14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 4A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:322209","GARD:18100","DOID:0110573","OMIM:600652","MESH:C563460","UMLS:C1833503"],"synonyms":[{"name":"DFNA4A","type":"narrow"},{"name":"MYH14 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 4A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 4A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYH14","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 4A","type":"narrow"},{"name":"deafness, autosomal dominant 4","type":"narrow"},{"name":"deafness, autosomal dominant 4A","type":"narrow"},{"name":"deafness, autosomal dominant 4a","type":"narrow"},{"name":"deafness, autosomal dominant type 4A","type":"narrow"}],"termid":"MONDO:0010915","terms_by_termid":{"MONDO:0010915":null},"xrefs":{"Monarch":{"xref_id":"0010915"}}}


id: PBO:0116786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZC3HAV1 like","termid":"PBO:0116786"}


id: MONDO:0004113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete HCL-v (obsolete MONDO:0004113)","termid":"MONDO:0004113","xrefs":{"Monarch":{"xref_id":"0004113"}}}


id: MONDO:1010892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the CTSD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CTSD-related, dog","secondary_identifiers":["OMIA:001505-9615"],"synonyms":[{"name":"neuronal ceroid lipofuscinosis, 10, dog","type":"related"}],"termid":"MONDO:1010892","xrefs":{"Monarch":{"xref_id":"1010892"}}}


id: GO:0033691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sialic acid, a N- or O- substituted derivative of neuraminic acid, a nine carbon monosaccharide. Sialic acids often occur in polysaccharides, glycoproteins, and glycolipids in animals and bacteria.","definition_xrefs":["ISBN:9780721601465","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"sialic acid binding","synonyms":[{"name":"N-acetylneuraminic acid binding","type":"narrow"}],"termid":"GO:0033691"}


id: MONDO:0007395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniofacial-deafness-hand syndrome (CDHS) is an autosomal dominant disorder, described in one family to date, characterized by characteristic facial features (flat facial profile with normal calvarium, hypertelorism, small downslanting palpebral fissures, hypoplastic nose with button tip and slitlike nares, small ''pursed'' mouth), profound sensorineural deafness, and ulnar deviations and contractures of the hand. CDHS is thought to be an allelic variant of Waardenburg syndrome that can be distinguished from the latter by its imaging findings and distinct facial features.","definition_xrefs":["Orphanet:1529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial-deafness-hand syndrome","secondary_identifiers":["OMIM:122880","DOID:0111336","ICD9:759.89","MESH:C536453","UMLS:C1852510","MEDGEN:377694","SCTID:702362004","GARD:1571","icd11.foundation:1355682887"],"synonyms":[{"name":"CDHS","type":"exact"},{"name":"Sommer-Young-Wee-Frye syndrome","type":"exact"},{"name":"craniofacial deafness hand syndrome","type":"related"},{"name":"craniofacial-deafness-hand syndrome","type":"exact"},{"name":"features of flat facial profile, hypertelorism, hypoplastic nose with slitlike nares, and a sensorineural hearing loss","type":"related"}],"termid":"MONDO:0007395","xrefs":{"Monarch":{"xref_id":"0007395"}}}


id: GO:0098857
data:
  {"annotated_genes":["SJAG_04001","SJAG_03536","SJAG_04620","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105154,90258,91156,120539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"A membrane region with a lipid composition that is distinct from that of the membrane regions that surround it.","definition_xrefs":["PMID:26253820","PMID:20044567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03536":null,"SJAG_04001":null,"SJAG_04620":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"membrane microdomain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098857","terms_by_termid":{"GO:0044853":null}}


id: GO:0140485
data:
  {"annotated_genes":["SJAG_00699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113838],"is_not":false,"summary":null,"term":"GO:0140485"}]},"cv_name":"molecular_function","definition":"Enables the transfer of 5-aminolevulinic acid from one side of a membrane to the other.","definition_xrefs":["PMID:31989647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"5-aminolevulinic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140485","terms_by_termid":{"GO:0140485":null}}


id: GO:0017166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vinculin binding","termid":"GO:0017166"}


id: MONDO:0017740
data:
  {"annotated_genes":["SJAG_02102","SJAG_00437","SJAG_04697","SJAG_00924","SJAG_01069","SJAG_03056","SJAG_01950","SJAG_04952","SJAG_02783","SJAG_04127","SJAG_04096","SJAG_02648","SJAG_04363","SJAG_00334","SJAG_03774","SJAG_03311","SJAG_00747","SJAG_03656","SJAG_01209"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012052"},{"annotations":[88866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013349"},{"annotations":[87562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011783"},{"annotations":[88682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011933"},{"annotations":[88317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010998"},{"annotations":[87052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011291"},{"annotations":[86891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011969"},{"annotations":[88253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012117"},{"annotations":[87633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014248"},{"annotations":[87227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014543"},{"annotations":[88240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013789"},{"annotations":[88695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010472"},{"annotations":[86860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011964"},{"annotations":[89062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009890"},{"annotations":[88399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011629"},{"annotations":[88142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[89006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013968"},{"annotations":[86838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008907"},{"annotations":[88123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012783"},{"annotations":[87472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014270"},{"annotations":[87475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014271"},{"annotations":[87968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013870"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of protein N-linked glycosylation.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"glycoprotein metabolism disease","termid":"MONDO:0045010"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00437":null,"SJAG_00747":null,"SJAG_00924":null,"SJAG_01069":null,"SJAG_01209":null,"SJAG_01950":null,"SJAG_02102":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03774":null,"SJAG_04096":null,"SJAG_04127":null,"SJAG_04363":null,"SJAG_04697":null,"SJAG_04952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"disorder of protein N-glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1826111","UMLS:C5681044","Orphanet:309347","GARD:21335","icd11.foundation:292641586"],"synonyms":[{"name":"disorder of protein N-linked glycosylation","type":"exact"},{"name":"protein N-linked glycosylation disease","type":"exact"}],"termid":"MONDO:0017740","terms_by_termid":{"MONDO:0008907":null,"MONDO:0009890":null,"MONDO:0010472":null,"MONDO:0010998":null,"MONDO:0011257":null,"MONDO:0011291":null,"MONDO:0011629":null,"MONDO:0011783":null,"MONDO:0011933":null,"MONDO:0011964":null,"MONDO:0011969":null,"MONDO:0012052":null,"MONDO:0012117":null,"MONDO:0012783":null,"MONDO:0013349":null,"MONDO:0013789":null,"MONDO:0013870":null,"MONDO:0013968":null,"MONDO:0014248":null,"MONDO:0014270":null,"MONDO:0014271":null,"MONDO:0014543":null},"xrefs":{"Monarch":{"xref_id":"0017740"}}}


id: PATO:0002226
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cylindrical shape quality inhering in a bearer by virtue of the bearer's being imperfectly cylindrical or approximately cylindrical.","direct_ancestors":[{"relation_name":"is_a","term_name":"cylindrical","termid":"PATO:0001873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subcylindrical","termid":"PATO:0002226"}


id: GO:0019252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of starch, the most important reserve polysaccharide in plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"starch metabolic process","termid":"GO:0005982"},{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"starch biosynthetic process","secondary_identifiers":["MetaCyc:PWY-622"],"synonyms":[{"name":"starch anabolism","type":"exact"},{"name":"starch biosynthesis","type":"exact"},{"name":"starch formation","type":"exact"},{"name":"starch synthesis","type":"exact"}],"termid":"GO:0019252"}


id: PBO:0055350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2779","termid":"PBO:0055350"}


id: PBO:0080151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VHL binding protein 1","termid":"PBO:0080151"}


id: PBO:0045217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC8 pseudogene 2","termid":"PBO:0045217"}


id: GO:0008574
data:
  {"annotated_genes":["SJAG_01297","SJAG_00773","SJAG_00930","SJAG_04745","SJAG_00851","SJAG_02336","SJAG_00332"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63003,77578,77705,79583,80622,105452,105653],"is_not":false,"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule toward the plus end, driven by ATP hydrolysis.","definition_xrefs":["PMID:32842864","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule motor activity","termid":"GO:0003777"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_02336":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003774","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"plus-end-directed microtubule motor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["MetaCyc:3.6.4.4-RXN","EC:5.6.1.3"],"synonyms":[{"name":"ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"ATP-dependent plus-end-directed microtubule motor activity","type":"exact"},{"name":"kinesin ATP phosphohydrolase (plus-end-directed)","type":"narrow"},{"name":"kinesin activity","type":"related"},{"name":"microtubule motor activity, plus-end-directed","type":"exact"},{"name":"plus-end-directed ATP-dependent microtubule motor activity","type":"exact"},{"name":"plus-end-directed kinesin ATPase activity","type":"narrow"}],"termid":"GO:0008574","terms_by_termid":{"GO:0008574":null}}


id: MONDO:0004401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant testicular germ cell tumor that is resistant to treatment.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant testicular germ cell tumor","termid":"MONDO:0003510"},{"relation_name":"is_a","term_name":"refractory malignant neoplasm","termid":"MONDO:0036501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testis refractory cancer","secondary_identifiers":["MEDGEN:235122","UMLS:C1377904","NCIT:C9077","DOID:7928"],"synonyms":[{"name":"refractory cancer of testis","type":"exact"},{"name":"refractory cancer of the testis","type":"exact"},{"name":"refractory malignant testicular germ cell tumor","type":"exact"},{"name":"refractory malignant testicular germ cell tumour","type":"exact"},{"name":"refractory testicular cancer","type":"exact"},{"name":"refractory testicular carcinoma","type":"exact"}],"termid":"MONDO:0004401","xrefs":{"Monarch":{"xref_id":"0004401"}}}


id: GO:0023009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal causes activation of T cell receptor signaling.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete initiation of T cell receptor signaling (obsolete GO:0023009)","synonyms":[{"name":"initiation of T cell receptor signaling","type":"exact"},{"name":"initiation of T cell receptor signalling","type":"exact"}],"termid":"GO:0023009"}


id: PBO:0060784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B10 pseudogene 2","termid":"PBO:0060784"}


id: GO:1901394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transforming growth factor beta1 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transforming growth factor beta1 activation (obsolete GO:1901394)","synonyms":[{"name":"activation of L-TGF-beta 1 activation","type":"exact"},{"name":"activation of TGF-beta 1 activation","type":"exact"},{"name":"activation of TGFB1 activation","type":"exact"},{"name":"activation of TGFbeta 1 activation","type":"exact"},{"name":"activation of latent-TGF-beta1 activation","type":"exact"},{"name":"activation of transforming growth factor beta1 activation","type":"narrow"},{"name":"activation of transforming growth factor-beta1 activation","type":"exact"},{"name":"positive regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"positive regulation of TGF-beta 1 activation","type":"exact"},{"name":"positive regulation of TGFB1 activation","type":"exact"},{"name":"positive regulation of TGFbeta 1 activation","type":"exact"},{"name":"positive regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"positive regulation of transforming growth factor-beta1 activation","type":"exact"},{"name":"up regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"up regulation of TGF-beta 1 activation","type":"exact"},{"name":"up regulation of TGFB1 activation","type":"exact"},{"name":"up regulation of TGFbeta 1 activation","type":"exact"},{"name":"up regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"up regulation of transforming growth factor beta1 activation","type":"exact"},{"name":"up regulation of transforming growth factor-beta1 activation","type":"exact"},{"name":"up-regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"up-regulation of TGF-beta 1 activation","type":"exact"},{"name":"up-regulation of TGFB1 activation","type":"exact"},{"name":"up-regulation of TGFbeta 1 activation","type":"exact"},{"name":"up-regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta1 activation","type":"exact"},{"name":"up-regulation of transforming growth factor-beta1 activation","type":"exact"},{"name":"upregulation of L-TGF-beta 1 activation","type":"exact"},{"name":"upregulation of TGF-beta 1 activation","type":"exact"},{"name":"upregulation of TGFB1 activation","type":"exact"},{"name":"upregulation of TGFbeta 1 activation","type":"exact"},{"name":"upregulation of latent-TGF-beta1 activation","type":"exact"},{"name":"upregulation of transforming growth factor beta1 activation","type":"exact"},{"name":"upregulation of transforming growth factor-beta1 activation","type":"exact"}],"termid":"GO:1901394"}


id: PBO:0048480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCNT2 pseudogene 1","termid":"PBO:0048480"}


id: PR:O43026
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.12","synonyms":[{"name":"GAPDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpd3","type":"exact"}],"termid":"PR:O43026"}


id: MONDO:0007935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominantly inherited cystoid macular edema manifesting with macular atrophy, strabismus and, sometimes, pericentral retinitis pigmentosa. It is associated with a poor visual prognosis.","definition_xrefs":["Orphanet:75381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular retinal edema","termid":"MONDO:0003005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cystoid macular edema","secondary_identifiers":["GARD:16694","OMIM:153880","MEDGEN:7435","UMLS:C0024440","NCIT:C34794","ICD10CM:H35.5","DOID:4447","SCTID:312921000"],"synonyms":[{"name":"DCMD","type":"exact"},{"name":"Mddc","type":"related"},{"name":"autosomal dominant cystoid macular edema","type":"exact"},{"name":"autosomal dominant cystoid macular oedema","type":"exact"},{"name":"cystoid macular dystrophy","type":"related"},{"name":"familial macular edema","type":"exact"},{"name":"familial macular oedema","type":"exact"},{"name":"macular dystrophy, dominant cystoid","type":"related"},{"name":"macular edema, cystoid","type":"related"}],"termid":"MONDO:0007935","xrefs":{"Monarch":{"xref_id":"0007935"}}}


id: GO:0102390
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: mycophenolic acid O-acyl-glucuronide(1-) + H2O = mycophenolate + H+ + D-glucopyranuronate.","definition_xrefs":["GOC:pz","EC:3.1.1.93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"mycophenolic acid acyl-glucuronide esterase activity","secondary_identifiers":["RHEA:34179","MetaCyc:RXN-13605"],"termid":"GO:0102390"}


id: MONDO:0011465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"infundibulocystic basal cell carcinoma","secondary_identifiers":["GARD:9788","MEDGEN:220984","OMIM:604451","MESH:C537655","UMLS:C1304297","NCIT:C27540","DOID:4279"],"synonyms":[{"name":"basal cell carcinoma with follicular differentiation","type":"related"},{"name":"basal cell carcinoma, infundibulocystic","type":"related"},{"name":"skin infundibulocystic basal cell carcinoma","type":"exact"}],"termid":"MONDO:0011465","xrefs":{"Monarch":{"xref_id":"0011465"}}}


id: GO:0016329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function held by products which directly regulate any step in the process of apoptosis.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete apoptosis regulator activity (obsolete GO:0016329)","synonyms":[{"name":"apoptosis regulator activity","type":"exact"}],"termid":"GO:0016329"}


id: PBO:0059326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L58","termid":"PBO:0059326"}


id: MOD:01235
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label - alkaline phosphatase to dephosphorylate","definition_xrefs":["Unimod:258#T","PubMed:15549660","PubMed:11467524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O monosubstituted residue","termid":"MOD:00581"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O monosubstituted L-threonine","synonyms":[{"name":"Label:18O(1)","type":"related"},{"name":"O18 Labeling","type":"related"}],"termid":"MOD:01235"}


id: PBO:0018277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med4","termid":"PBO:0018277"}


id: PR:Q10079
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glucose-induced degradation protein 4 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H1.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.14","secondary_identifiers":["UniProtKB:Q10079"],"synonyms":[{"name":"Spom972h-GID4","type":"exact"}],"termid":"PR:Q10079"}


id: MONDO:0032906
data:
  {"annotated_genes":["SJAG_04628"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88512],"is_not":false,"summary":null,"term":"MONDO:0032906"}]},"cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is an autosomal recessive mutation in the PCYT2 gene.","definition_xrefs":["PMID:31637422","MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 82, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5394037","OMIM:618770","MEDGEN:1710411","DOID:0112343","Orphanet:631073"],"synonyms":[{"name":"SPG82","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 82","type":"exact"},{"name":"spastic paraplegia 82, autosomal recessive","type":"exact"}],"termid":"MONDO:0032906","terms_by_termid":{"MONDO:0032906":null},"xrefs":{"Monarch":{"xref_id":"0032906"}}}


id: MOD:00970
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-hydroxy-allysine (Lys)","termid":"MOD:00970"}


id: GO:2001011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plant-type cell wall cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellulose biosynthetic process","termid":"GO:2001008"},{"relation_name":"is_a","term_name":"regulation of plant-type cell wall cellulose biosynthetic process","termid":"GO:2001009"},{"relation_name":"positively_regulates","term_name":"plant-type cell wall cellulose biosynthetic process","termid":"GO:0052324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of plant-type cell wall cellulose biosynthetic process","synonyms":[{"name":"positive regulation of cell wall cellulose biosynthesis","type":"exact"},{"name":"positive regulation of cellulose biosynthesis during cell wall biosynthesis","type":"related"}],"termid":"GO:2001011"}


id: PBO:0081818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 11, Y-linked","termid":"PBO:0081818"}


id: PBO:0071913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 52","termid":"PBO:0071913"}


id: PR:O59790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aurora kinase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ark1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.13c","secondary_identifiers":["UniProtKB:O59790"],"synonyms":[{"name":"SPCC320.13c","type":"related"},{"name":"Spom972h-AURKB","type":"exact"},{"name":"aurora-related kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sex1","type":"related"}],"termid":"PR:O59790"}


id: PBO:0061984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 3","termid":"PBO:0061984"}


id: FYPO:0007827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin contractile ring organization is normal (i.e. indistinguishable from wild type). The process results in the assembly, arrangement of constituent parts, or disassembly of the actomyosin contractile ring.","definition_xrefs":["GO:0044837","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal actomyosin contractile ring organization","synonyms":[{"name":"normal actomyosin contractile ring organisation","type":"exact"},{"name":"normal actomyosin contractile ring organization during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring organization during vegetative growth","type":"exact"},{"name":"normal contractile ring organization","type":"exact"}],"termid":"FYPO:0007827"}


id: PR:P20772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trifunctional purine biosynthetic protein adenosine-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional purine biosynthetic protein ADE1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.01","secondary_identifiers":["UniProtKB:P20772"],"synonyms":[{"name":"Spom972h-GART","type":"exact"}],"termid":"PR:P20772"}


id: MONDO:1010506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocardial fibroelastosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial fibroelastosis, non-human animal","termid":"MONDO:1010027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocardial fibroelastosis, horse","secondary_identifiers":["OMIA:001803-9796"],"termid":"MONDO:1010506","xrefs":{"Monarch":{"xref_id":"1010506"}}}


id: PBO:0116668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 6","termid":"PBO:0116668"}


id: GO:0030748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + an amine = S-adenosyl-L-homocysteine + a methylated amine. Acts on primary, secondary and tertiary amines.","definition_xrefs":["EC:2.1.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"amine N-methyltransferase activity","secondary_identifiers":["MetaCyc:AMINE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:amine N-methyltransferase activity","type":"related"},{"name":"arylamine N-methyltransferase activity","type":"narrow"},{"name":"nicotine N-methyltransferase activity","type":"narrow"},{"name":"tryptamine N-methyltransferase activity","type":"narrow"},{"name":"tryptamine methyltransferase","type":"narrow"}],"termid":"GO:0030748"}


id: PBO:0067397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 503, pseudogene","termid":"PBO:0067397"}


id: PBO:0004511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Apl1 (predicted)","termid":"PBO:0004511"}


id: FYPO:0003107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that are shorter than normal, and that continue to decrease in length over successive generations.","definition_xrefs":["PMID:24013504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shortened telomeres during vegetative growth","termid":"FYPO:0002239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"progressively shortening telomeres during vegetative growth","synonyms":[{"name":"progressively decreasing telomere length during vegetative growth","type":"exact"},{"name":"progressively shortening telomeres during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003107"}


id: PBO:0028817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_single-stranded_DNA_5'-3'_exodeoxyribonuclease_activity","termid":"PBO:0028817"}


id: PBO:0036497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved calcium-binding protein","termid":"PBO:0036497"}


id: PBO:0047915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2)","termid":"PBO:0047915"}


id: PBO:0086817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YLR415C is not an essential gene","termid":"PBO:0086817"}


id: PBO:0039158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 5","termid":"PBO:0039158"}


id: PR:O59712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C3B8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.04c","synonyms":[{"name":"Spom972h-SPBC3B8.04c","type":"exact"}],"termid":"PR:O59712"}


id: GO:0031464
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id: GO:0002454
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deletion of B cells by apoptotic process occurring as part of peripheral tolerance induction and B cell selection.","definition_xrefs":["GOC:add","GOC:jal","ISBN:0781735149","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell deletion","termid":"GO:0002516"},{"relation_name":"part_of","term_name":"peripheral B cell tolerance induction","termid":"GO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral B cell deletion","synonyms":[{"name":"peripheral B lymphocyte deletion","type":"exact"},{"name":"peripheral B-cell deletion","type":"exact"},{"name":"peripheral B-lymphocyte deletion","type":"exact"}],"termid":"GO:0002454"}


id: PBO:0061097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLGN1 antisense RNA 1","termid":"PBO:0061097"}


id: PBO:0034381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_synthesis_of","termid":"PBO:0034381"}


id: MOD:01282
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:10825247","PubMed:15541752","Unimod:206#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrolein addition +56","termid":"MOD:00557"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +56 - site H","synonyms":[{"name":"Acrolein addition +56","type":"related"},{"name":"Delta:H(4)C(3)O(1)","type":"related"}],"termid":"MOD:01282"}


id: GO:0071365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to auxin","termid":"GO:0009733"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to auxin stimulus","termid":"GO:0071365"}


id: PBO:0108912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG1 cohesin complex component","termid":"PBO:0108912"}


id: PBO:0053494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 472","termid":"PBO:0053494"}


id: PBO:0111810
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family","termid":"PBO:0111810"}


id: MONDO:0002550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a hypoglossal nerve.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoglossal nerve disorder","termid":"MONDO:0001810"},{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoglossal nerve neoplasm","secondary_identifiers":["SCTID:126978008","DOID:3198","MEDGEN:220392","NCIT:C5830","ICD9:239.7","UMLS:C1263903"],"synonyms":[{"name":"XIIth cranial nerve neoplasms","type":"exact"},{"name":"XIIth cranial nerve tumors","type":"exact"},{"name":"XIIth cranial nerve tumours","type":"exact"},{"name":"hypoglossal nerve neoplasm","type":"exact"},{"name":"hypoglossal nerve neoplasm (disease)","type":"exact"},{"name":"hypoglossal nerve neoplasms","type":"exact"},{"name":"hypoglossal nerve tumor","type":"exact"},{"name":"hypoglossal nerve tumors","type":"exact"},{"name":"hypoglossal nerve tumour","type":"exact"},{"name":"hypoglossal nerve tumours","type":"exact"},{"name":"neoplasm of hypoglossal nerve","type":"exact"},{"name":"neoplasm of the hypoglossal nerve","type":"exact"},{"name":"neoplasm of the twelfth cranial nerve","type":"exact"},{"name":"neoplasm of twelfth cranial nerve","type":"exact"},{"name":"tumor of hypoglossal nerve","type":"exact"},{"name":"tumor of the hypoglossal nerve","type":"exact"},{"name":"tumor of the twelfth cranial nerve","type":"exact"},{"name":"tumor of twelfth cranial nerve","type":"exact"},{"name":"tumour of hypoglossal nerve","type":"exact"},{"name":"tumour of the hypoglossal nerve","type":"exact"},{"name":"tumour of the twelfth cranial nerve","type":"exact"},{"name":"tumour of twelfth cranial nerve","type":"exact"},{"name":"twelfth cranial nerve neoplasm","type":"exact"},{"name":"twelfth cranial nerve neoplasms","type":"exact"},{"name":"twelfth cranial nerve tumor","type":"exact"},{"name":"twelfth cranial nerve tumors","type":"exact"},{"name":"twelfth cranial nerve tumour","type":"exact"},{"name":"twelfth cranial nerve tumours","type":"exact"}],"termid":"MONDO:0002550","xrefs":{"Monarch":{"xref_id":"0002550"}}}


id: GO:0061800
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A supramolecular fiber formed from fibronectin molecules. The fibrils are 5 to 25nm in diameter and can form branched meshworks.","definition_xrefs":["PMID:20690820","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fibronectin fibril","termid":"GO:0061800"}


id: GO:0003953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + H2O = ADP-D-ribose + nicotinamide + H+.","definition_xrefs":["PMID:7805847","RHEA:16301","PMID:11866528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"NAD+ nucleosidase activity","secondary_identifiers":["MetaCyc:RXN-13859","EC:3.2.2.5"],"synonyms":[{"name":"DPNase activity","type":"exact"},{"name":"NAD glycohydrolase activity","type":"exact"},{"name":"NAD nucleosidase activity","type":"exact"},{"name":"NAD(+) glycohydrolase activity","type":"exact"},{"name":"NADase activity","type":"exact"},{"name":"beta-NAD(+) glycohydrolase activity","type":"exact"},{"name":"diphosphopyridine nucleosidase activity","type":"exact"},{"name":"nicotinamide adenine dinucleotide glycohydrolase activity","type":"exact"},{"name":"nicotinamide adenine dinucleotide nucleosidase activity","type":"exact"}],"termid":"GO:0003953"}


id: PBO:0052953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinectin 1","termid":"PBO:0052953"}


id: GO:0071770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components, including (phenyl)phthiocerol, phthiodiolone, phthiotriol dimycocerosate and diphthioceranate, to form the DIM/DIP layer of the Actinobacterium-type cell wall.","definition_xrefs":["PMID:15653820","GOC:pr","PMID:3149973","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"Actinobacterium-type cell wall biogenesis","termid":"GO:0071766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"DIM/DIP cell wall layer assembly","synonyms":[{"name":"DIM cell wall layer assembly","type":"exact"},{"name":"DIM/DIP cell wall layer biogenesis","type":"related"},{"name":"PDIM cell wall layer assembly","type":"exact"}],"termid":"GO:0071770"}


id: PBO:0038970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A2a receptor","termid":"PBO:0038970"}


id: FYPO:0000786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which plasmids are lost at a higher frequency than normal. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased plasmid loss","synonyms":[{"name":"increased plasmid loss during mitotic cell cycle","type":"related"},{"name":"increased plasmid loss during vegetative growth","type":"exact"}],"termid":"FYPO:0000786"}


id: MONDO:0022873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum dysgenesis cleft spasm","termid":"MONDO:0022873","xrefs":{"Monarch":{"xref_id":"0022873"}}}


id: PBO:0066250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMS3 antisense RNA 3","termid":"PBO:0066250"}


id: MONDO:0002470
data:
  {"annotated_genes":["SJAG_01207","SJAG_03206","SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011125"},{"annotations":[87110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014615"},{"annotations":[87111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014619"}]},"cv_name":"mondo","definition":"A trichothiodystrophy that is photosensitive, and caused by defects in the NER pathway","definition_xrefs":["Wikipedia:Trichothiodystrophy#Photosensitive_forms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"},{"relation_name":"is_a","term_name":"radiation-induced disorder","termid":"MONDO:0043459"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"photosensitive trichothiodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C4924","Orphanet:453","UMLS:C1848412","MEDGEN:336339","DOID:2960","NANDO:1200626"],"synonyms":[{"name":"IBIDS syndrome","type":"exact"},{"name":"Ichtyosis, brittle hair, intellectual impairment, decreased fertility, and short stature","type":"related"},{"name":"Tay syndrome","type":"exact"},{"name":"sulfur-deficient brittle hair syndrome","type":"exact"},{"name":"trichothiodystrophy","type":"broad"},{"name":"trichothiodystrophy with congenital ichthyosis","type":"broad"},{"name":"trichothiodystrophy with congenital ichtyosis","type":"related"}],"termid":"MONDO:0002470","terms_by_termid":{"MONDO:0011125":null,"MONDO:0014615":null,"MONDO:0014619":null},"xrefs":{"Monarch":{"xref_id":"0002470"}}}


id: GO:0005523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"tropomyosin binding","termid":"GO:0005523"}


id: PBO:0043894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1 pseudogene 1","termid":"PBO:0043894"}


id: PBO:0028335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K16_acetylation_at_centromere_central_core","termid":"PBO:0028335"}


id: PBO:0057210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 377","termid":"PBO:0057210"}


id: PBO:0012065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-F/3-ketosphinganine reductase fusion protein (predicted)","termid":"PBO:0012065"}


id: PBO:0052360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 9","termid":"PBO:0052360"}


id: PR:Q9USQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USQ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.14c","synonyms":[{"name":"ODC-Az (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spa1","type":"exact"}],"termid":"PR:Q9USQ5"}


id: MONDO:0025556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"allergic asthma","termid":"MONDO:0004784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"isocyanate induced asthma","secondary_identifiers":["MEDGEN:729881","SCTID:404808000","UMLS:C1321273","DOID:0040041","ICD9:506.3"],"synonyms":[{"name":"isocyanates allergic asthma","type":"related"}],"termid":"MONDO:0025556","xrefs":{"Monarch":{"xref_id":"0025556"}}}


id: PBO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 4 (pseudogene)","termid":"PBO:0060156"}


id: GO:0021687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellar molecular layer is generated and organized. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["ISBN:0838580343","GOC:dph","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellar molecular layer development","termid":"GO:0021679"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer morphogenesis","termid":"GO:0021687"}


id: GO:0016006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A product of the fusion of the mitochondria during spermatogenesis. After the completion of meiosis the mitochondria of the spermatid collect along side the nucleus and fuse into two masses; these wrap around each other to produce the spherical Nebenkern. During flagellum elongation the Nebenkern unfolds and the two derivatives (major and minor mitochondrial derivatives) elongate down the axoneme.","definition_xrefs":["GOC:ma","PMID:25265054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial derivative","termid":"GO:0016007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Nebenkern","termid":"GO:0016006"}


id: GO:2000620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H4-K16 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H4-K16 acetylation (obsolete GO:2000620)","synonyms":[{"name":"positive regulation of histone H4 acetylation at K16","type":"exact"}],"termid":"GO:2000620"}


id: PBO:0089353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex actin-related protein subunit Arp2","termid":"PBO:0089353"}


id: PBO:0041164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 1 pseudogene 1","termid":"PBO:0041164"}


id: MONDO:0023679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hematohidrosis is a rare condition characterized by blood oozing from intact skin and mucosa. Signs and symptoms include sweating blood, crying bloody tears, bleeding from the nose, bleeding from the ears, or oozing bloodfrom other skin surfaces. The episodes are usually self-limiting.","definition_xrefs":["GARD:0013131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hematohidrosis","secondary_identifiers":["ICD9:705.89","MEDGEN:633305","GARD:13131","SCTID:238757003","UMLS:C0473554"],"synonyms":[{"name":"Hematidrosis","type":"related"},{"name":"Hematohidrosis","type":"related"}],"termid":"MONDO:0023679","xrefs":{"Monarch":{"xref_id":"0023679"}}}


id: MONDO:0015280
data:
  {"annotated_genes":["SJAG_03453","SJAG_02342","SJAG_00993","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[86844,86845,86843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[86849,86850,86848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"}]},"cv_name":"mondo","definition":"Cardiofaciocutaneous (CFC) syndrome is a RASopathy characterized by craniofacial dysmorphology, congenital heart disease, dermatological abnormalities (most commonly hyperkeratotic skin and sparse, curly hair), growth retardation and intellectual disability.","definition_xrefs":["Orphanet:1340"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"Noonan syndrome and Noonan-related syndrome","termid":"MONDO:0020297"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005093"],"is_obsolete":false,"name":"cardiofaciocutaneous syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535579","NCIT:C84617","SCTID:403770008","GARD:9146","NANDO:2200967","UMLS:C1275081","MEDGEN:266149","NANDO:1200462","DOID:0060233","NORD:891","OMIMPS:115150"],"synonyms":[{"name":"CFC","type":"exact"},{"name":"CFC syndrome","type":"exact"},{"name":"cardio-facial-cutaneous syndrome","type":"exact"},{"name":"cardio-facio-cutaneous syndrome","type":"related"},{"name":"cardiofaciocutaneous (CFC) syndrome","type":"exact"},{"name":"cardiofaciocutaneous syndrome","type":"exact"},{"name":"congenital heart defects characteristic facial appearance ectodermal abnormalities and growth failure","type":"related"}],"termid":"MONDO:0015280","terms_by_termid":{"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null},"xrefs":{"Monarch":{"xref_id":"0015280"}}}


id: PBO:0081211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger matrin-type 1","termid":"PBO:0081211"}


id: PBO:0085067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonfunctional homolog of Gpm1p phosphoglycerate mutase; if functional, would convert 3-phosphoglycerate to 2-phosphoglycerate in glycolysis; GPM2 has a paralog, GPM3, that arose from the whole genome duplication","termid":"PBO:0085067"}


id: FYPO:0005179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) exposure during mitotic G1 phase is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to UV. The most common abnormality is for the cell cycle to progress as in the absence of UV.","definition_xrefs":["PomBase:mah","PMID:15498101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle delay following UV exposure during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ultraviolet light during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to UV during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005179"}


id: PBO:0081758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 688","termid":"PBO:0081758"}


id: PBO:0111914
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-8 family","termid":"PBO:0111914"}


id: PBO:0046772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exophilin 5","termid":"PBO:0046772"}


id: GO:0052229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving macromolecules within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism of macromolecule in other organism involved in symbiotic interaction (obsolete GO:0052229)","synonyms":[{"name":"metabolism of macromolecule in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052229"}


id: PBO:0082989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic branched-chain amino acid (BCAA) aminotransferase; preferentially involved in BCAA catabolism; homolog of murine ECA39; highly expressed during stationary phase and repressed during logarithmic phase; BAT2 has a paralog, BAT1, that arose from the whole genome duplication","termid":"PBO:0082989"}


id: MONDO:0030014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, limb-girdle, autosomal recessive 26","secondary_identifiers":["OMIM:618848","MEDGEN:1718449","UMLS:C5394268"],"synonyms":[{"name":"LGMDR26","type":"exact"},{"name":"MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 26","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 26","type":"exact"}],"termid":"MONDO:0030014","xrefs":{"Monarch":{"xref_id":"0030014"}}}


id: GO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: decanoyl-CoA + an alcohol = CoA + a decyl ester.","definition_xrefs":["GOC:mah","PMID:16361250"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol O-decanoyltransferase activity (obsolete GO:0034322)","termid":"GO:0034322"}


id: PBO:0034347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_upregulating_or_causing_pathological_process","termid":"PBO:0034347"}


id: GO:0045944
data:
  {"annotated_genes":["SJAG_01193","SJAG_03967","SJAG_00164","SJAG_02138","SJAG_02698","SJAG_03484","SJAG_01150","SJAG_04206","SJAG_00297","SJAG_05341","SJAG_04705","SJAG_01952","SJAG_02311","SJAG_03118","SJAG_05153","SJAG_01583","SJAG_02254","SJAG_02592","SJAG_03735","SJAG_02551","SJAG_02709","SJAG_04749","SJAG_00698","SJAG_05288","SJAG_01403","SJAG_06576","SJAG_04820","SJAG_02391","SJAG_04099","SJAG_04855","SJAG_04647","SJAG_01878","SJAG_06599","SJAG_01771","SJAG_00909","SJAG_04388","SJAG_02938","SJAG_04249","SJAG_00342","SJAG_04611","SJAG_03241","SJAG_02730","SJAG_01532","SJAG_04036","SJAG_03501","SJAG_03879","SJAG_04755","SJAG_02849","SJAG_03421","SJAG_00973","SJAG_04421","SJAG_00766","SJAG_01805","SJAG_01694","SJAG_03519","SJAG_03622","SJAG_00802","SJAG_00163","SJAG_00987","SJAG_02252","SJAG_02415","SJAG_00693","SJAG_04092","SJAG_05343","SJAG_03590","SJAG_04813","SJAG_04551","SJAG_02956","SJAG_03067","SJAG_00266","SJAG_03538","SJAG_04712","SJAG_03183","SJAG_03346","SJAG_03289","SJAG_00156","SJAG_01199","SJAG_00822","SJAG_01113","SJAG_02255","SJAG_00792","SJAG_03573","SJAG_05203","SJAG_02218","SJAG_00613","SJAG_03143","SJAG_01151","SJAG_01938","SJAG_02472","SJAG_02810","SJAG_00210","SJAG_02494","SJAG_04191","SJAG_01778","SJAG_03981","SJAG_01149","SJAG_00641","SJAG_04839","SJAG_01441","SJAG_05247","SJAG_02773","SJAG_02389","SJAG_01213","SJAG_02474","SJAG_02057","SJAG_02723","SJAG_01740","SJAG_06638","SJAG_02326","SJAG_02048","SJAG_00904","SJAG_05313","SJAG_02196","SJAG_03061","SJAG_04009","SJAG_02406","SJAG_00150","SJAG_02671","SJAG_01307","SJAG_00269","SJAG_01243","SJAG_01916","SJAG_01062"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60648,61934,62843,62939,63722,64081,64980,66444,67591,68601,69039,70114,70322,70847,71107,72000,72079,72509,72518,73266,73433,73630,74015,74242,74647,75122,75141,75555,75633,76576,76807,77397,77577,77687,78152,78522,79176,79218,79820,80386,80912,81379,81449,81611,81754,89219,94593,95555,95653,96221,96942,97391,97551,98799,99164,99395,99396,99397,99398,99399,100291,100451,101172,101380,102377,102388,104044,104124,104171,104596,105069,106353,109348,109509,109910,110402,110578,110753,110991,111641,113712,113842,114261,116811,118260,118452,118978,119363,120232,121106,121107],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[108587,89769,95334,91286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[91533,81360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[81343,118987,72830,73242,79972,65694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[120944,96298,100549,103852,97243,107615,107972,108299,110695,105316,100902,110668,108162,96183,89256,97725,65352,92506,105576,92191,116712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"positively_regulates","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":123,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00156":null,"SJAG_00163":null,"SJAG_00164":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00269":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00613":null,"SJAG_00641":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00766":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00973":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01113":null,"SJAG_01149":null,"SJAG_01150":null,"SJAG_01151":null,"SJAG_01193":null,"SJAG_01199":null,"SJAG_01213":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01403":null,"SJAG_01441":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01740":null,"SJAG_01771":null,"SJAG_01778":null,"SJAG_01805":null,"SJAG_01878":null,"SJAG_01916":null,"SJAG_01938":null,"SJAG_01952":null,"SJAG_02048":null,"SJAG_02057":null,"SJAG_02138":null,"SJAG_02196":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02254":null,"SJAG_02255":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02389":null,"SJAG_02391":null,"SJAG_02406":null,"SJAG_02415":null,"SJAG_02472":null,"SJAG_02474":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02592":null,"SJAG_02671":null,"SJAG_02698":null,"SJAG_02709":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02810":null,"SJAG_02849":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03061":null,"SJAG_03067":null,"SJAG_03118":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03289":null,"SJAG_03346":null,"SJAG_03421":null,"SJAG_03484":null,"SJAG_03501":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03967":null,"SJAG_03981":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04099":null,"SJAG_04191":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04551":null,"SJAG_04611":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04755":null,"SJAG_04813":null,"SJAG_04820":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05153":null,"SJAG_05203":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05313":null,"SJAG_05341":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription by RNA polymerase II","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0045817","Reactome:R-HSA-8866906","Reactome:R-HSA-2173796","Reactome:R-HSA-8866907","GO:0010552"],"synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter","type":"related"},{"name":"positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0045944","terms_by_termid":{"GO:0032968":null,"GO:0045899":null,"GO:0045944":null,"GO:0060261":null,"GO:0060963":null}}


id: PBO:0041593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5B","termid":"PBO:0041593"}


id: PBO:0035855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_calcium_ion","termid":"PBO:0035855"}


id: GO:1900474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of mating type switching by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8625409","GOC:dgf","GOC:TermGenie","PMID:8625408"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900474)","termid":"GO:1900474"}


id: MONDO:0020371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Essential iris atrophy is a clinical variant of iridocorneal endothelial (ICE) syndrome, characterized by progressive iris atrophy and holes present on the surface of the iris, corneal edema, corectopia, uveal ectropion and anterior synechiae. Secondary glaucoma is also a common complication of the disease.","definition_xrefs":["Orphanet:98981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridocorneal endothelial syndrome","termid":"MONDO:0018988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential iris atrophy","secondary_identifiers":["MEDGEN:543177","GARD:19611","NORD:1109","ICD9:364.51","SCTID:25913001","UMLS:C0271111"],"termid":"MONDO:0020371","xrefs":{"Monarch":{"xref_id":"0020371"}}}


id: PBO:0044049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 2","termid":"PBO:0044049"}


id: PBO:0050108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 18","termid":"PBO:0050108"}


id: MOD:01572
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01572"}


id: MONDO:0700249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolytic ichthyosis","termid":"MONDO:0007239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolytic hyperkeratosis 1","secondary_identifiers":["UMLS:C5781874","DOID:0081358","MEDGEN:1826137","OMIM:113800"],"termid":"MONDO:0700249","xrefs":{"Monarch":{"xref_id":"0700249"}}}


id: GO:0018534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nitrilotriacetate + OH- = H+ + 2 e- + glyoxylate + iminodiacetate.","definition_xrefs":["UM-BBD_reactionID:r0588"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrilotriacetate dehydrogenase activity (obsolete GO:0018534)","termid":"GO:0018534"}


id: PBO:0060877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope integral membrane protein 2","termid":"PBO:0060877"}


id: PBO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper amine oxidase Cao1","termid":"PBO:0001804"}


id: PBO:0056021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich single-pass membrane protein 2","termid":"PBO:0056021"}


id: PBO:0059965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 10","termid":"PBO:0059965"}


id: GO:0075275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the development of a telium, which is a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telium development","termid":"GO:0075275"}


id: PBO:0040121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 8","termid":"PBO:0040121"}


id: GO:0120538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methoxy-6-(all-trans-polyprenyl)phenol + 2 reduced [2Fe-2S]-[ferredoxin] + O2 + 2 H+ = 2-methoxy-6-(all-trans-polyprenyl)benzene-1,4-diol + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O.","definition_xrefs":["RHEA:81183","PMID:38425362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-methoxy-6-polyprenolphenol 4-hydroxylase activity","termid":"GO:0120538"}


id: GO:2000700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myoblast differentiation","termid":"GO:0045663"},{"relation_name":"is_a","term_name":"positive regulation of cardioblast differentiation","termid":"GO:0051891"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell myoblast differentiation","termid":"GO:2000690"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"positive regulation of cardiac myoblast differentiation","type":"related"},{"name":"positive regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000700"}


id: GO:0102444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isorhamnetin + S-adenosyl-L-methionine = 3,3'-O-dimethylquercetin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"isorhamnetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13929"],"termid":"GO:0102444"}


id: PBO:0013808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp103","termid":"PBO:0013808"}


id: GO:0061701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, bilayered proteolipid vesicle released from gram-negative bacterial outer membranes.","definition_xrefs":["GOC:dph","GOC:pr","PMID:20596524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"bacterial outer membrane vesicle","termid":"GO:0061701"}


id: PBO:0044736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 4","termid":"PBO:0044736"}


id: PR:000044699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht1/Me(K9)","termid":"PR:000027578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"Spom-hht1/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044699"}


id: PBO:0059385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S22","termid":"PBO:0059385"}


id: GO:0000820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of glutamine family amino acid metabolic process","synonyms":[{"name":"regulation of glutamine family amino acid metabolism","type":"exact"}],"termid":"GO:0000820"}


id: GO:0043096
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"}]},"cv_name":"biological_process","definition":"Any process that generates purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase biosynthetic process","termid":"GO:0009113"},{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleobase salvage","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"purine base salvage","type":"exact"}],"termid":"GO:0043096","terms_by_termid":{"GO:0006168":null}}


id: PBO:0027041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_heat-shock-inducible_genes_during_cellular_response_to_heat_shock","termid":"PBO:0027041"}


id: MONDO:0015931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare urogenital tumor (obsolete MONDO:0015931)","secondary_identifiers":["Orphanet:182114"],"termid":"MONDO:0015931","xrefs":{"Monarch":{"xref_id":"0015931"}}}


id: MONDO:0043087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thickened earlobes with conductive deafness from incus-stapes abnormalities","secondary_identifiers":["MESH:C536511","MEDGEN:419750","UMLS:C2931222"],"synonyms":[{"name":"Schweitzer Kemink Graham syndrome","type":"related"},{"name":"conductive hearing loss, middle ear ossicular anomalies, malformed thickened lop auricles, and micrognathia","type":"related"},{"name":"thickened earlobes with conductive deafness from incus-stapes abnormalities","type":"exact"}],"termid":"MONDO:0043087","xrefs":{"Monarch":{"xref_id":"0043087"}}}


id: GO:0047181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzoyl-CoA + 3 malonyl-CoA = 3 CO2 + 2,3',4,6-tetrahydroxybenzophenone + 4 coenzyme A.","definition_xrefs":["MetaCyc:2.3.1.151-RXN","EC:2.3.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"tetrahydroxybenzophenone synthase activity","secondary_identifiers":["RHEA:19305"],"synonyms":[{"name":"malonyl-CoA:3-hydroxybenzoyl-CoA malonyltransferase activity","type":"related"}],"termid":"GO:0047181"}


id: FYPO:0005322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which anaphase-promoting complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal anaphase-promoting complex assembly","synonyms":[{"name":"normal APC assembly","type":"exact"},{"name":"normal anaphase-promoting complex assembly during mitotic cell cycle","type":"related"},{"name":"normal anaphase-promoting complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005322"}


id: GO:0051133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer T cell activation.","definition_xrefs":["PMID:12154375","PMID:9133426","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NK T cell activation","synonyms":[{"name":"regulation of NK T lymphocyte activation","type":"exact"},{"name":"regulation of NK T-cell activation","type":"exact"},{"name":"regulation of NK T-lymphocyte activation","type":"exact"},{"name":"regulation of NKT cell activation","type":"exact"},{"name":"regulation of NT cell activation","type":"exact"},{"name":"regulation of natural T cell activation","type":"exact"},{"name":"regulation of natural killer T cell activation","type":"exact"}],"termid":"GO:0051133"}


id: GO:0072502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of trivalent inorganic anions at the level of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular trivalent inorganic anion homeostasis (obsolete GO:0072502)","termid":"GO:0072502"}


id: GO:0007421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stomatogastric nervous system over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatogastric nervous system development","termid":"GO:0007421"}


id: PATO:0000500
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which occurs earlier than the natural start time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advanced phase","termid":"PATO:0000500"}


id: GO:0051193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a cofactor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cofactor metabolic process (obsolete GO:0051193)","synonyms":[{"name":"regulation of cofactor metabolism","type":"exact"}],"termid":"GO:0051193"}


id: MONDO:0017236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the glomeruli that is characterized by a rapid loss in renal function with glomerular crescent formation observed on biopsy; it is often seen in patients with concomitant autoimmune disease, like Goodpasture's syndrome or systemic lupus erythematosus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"rapidly progressive glomerulonephritis","secondary_identifiers":["UMLS:C0221239","MedDRA:10018378","NCIT:C35264","ICD9:582.4","ICD9:583.4","MEDGEN:113155","NANDO:1200714","SCTID:236392004","ICD9:580.4","DOID:4776","NANDO:1200723","Orphanet:280569"],"synonyms":[{"name":"RPGN","type":"exact"},{"name":"crescentic glomerulonephritis","type":"related"}],"termid":"MONDO:0017236","xrefs":{"Monarch":{"xref_id":"0017236"}}}


id: GO:1905413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18468511","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of dense core granule exocytosis","synonyms":[{"name":"regulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905413"}


id: MONDO:0004899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofixation syndrome","secondary_identifiers":["SCTID:14785004","UMLS:C0339611","MEDGEN:573259","DOID:9843","ICD10CM:H50.42","icd11.foundation:1068979205","ICD9:378.34"],"synonyms":[{"name":"microstrabismus","type":"exact"},{"name":"microtropia","type":"exact"}],"termid":"MONDO:0004899","xrefs":{"Monarch":{"xref_id":"0004899"}}}


id: GO:0004849
data:
  {"annotated_genes":["SJAG_03708","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80819,94816],"is_not":false,"summary":null,"term":"GO:0004849"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + uridine = ADP + UMP.","definition_xrefs":["RHEA:16825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"uridine kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8954327","MetaCyc:URIDINEKIN-RXN"],"synonyms":[{"name":"uridine phosphokinase activity","type":"exact"},{"name":"uridine-cytidine kinase activity","type":"narrow"}],"termid":"GO:0004849","terms_by_termid":{"GO:0004849":null}}


id: GO:0019315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-allose metabolic process","termid":"GO:0019314"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"D-allose biosynthetic process","synonyms":[{"name":"D-allose anabolism","type":"exact"},{"name":"D-allose biosynthesis","type":"exact"},{"name":"D-allose formation","type":"exact"},{"name":"D-allose synthesis","type":"exact"}],"termid":"GO:0019315"}


id: GO:0033082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extrathymic T cell differentiation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"extrathymic T cell differentiation","termid":"GO:0033078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of extrathymic T cell differentiation","synonyms":[{"name":"regulation of extrathymic T cell development","type":"related"}],"termid":"GO:0033082"}


id: GO:0007374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a cup-shaped invagination at the posterior end of the embryo, bringing the posterior midgut and hindgut primordia into the interior.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior midgut invagination","termid":"GO:0007374"}


id: PBO:0091847
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CsX1-Related protein 1","termid":"PBO:0091847"}


id: FYECO:0000397
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which micafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ micafungin","termid":"FYECO:0000395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ micafungin LD","termid":"FYECO:0000397"}


