# terms

id: GO:0048519
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id: PBO:0048818
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id: GO:0033534
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id: MONDO:0007443
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id: GO:0003086
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id: PBO:0055931
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id: PBO:0038488
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id: PBO:0005693
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id: MONDO:0013478
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id: FYPO:0000736
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id: PBO:0057696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1285-1","termid":"PBO:0057696"}


id: GO:1990020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Axon collateral that ramifies in the area of the soma of the cell of origin.","definition_xrefs":["NIF_Subcellular:sao1642494436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon collateral","termid":"GO:0044303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"recurrent axon collateral","synonyms":[{"name":"recurrent collateral","type":"broad"}],"termid":"GO:1990020"}


id: PBO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor (predicted)","termid":"PBO:0000136"}


id: PBO:0071247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 88","termid":"PBO:0071247"}


id: GO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by a carbon dioxide stimulus is received and converted to a molecular signal by the vasomotor center of the central nervous system.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbon dioxide","termid":"GO:0003031"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by ischemic conditions","termid":"GO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of carbon dioxide by vasomotor center","termid":"GO:0002013"}


id: PATO:0001887
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to having a strong affinity for water; tending to dissolve in, mix with, or be wetted by water.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrophilicity","termid":"PATO:0001886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrophilic","termid":"PATO:0001887"}


id: PBO:0083321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF PRM6/YML047C","termid":"PBO:0083321"}


id: PBO:0074485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMYD3 antisense RNA 1","termid":"PBO:0074485"}


id: GO:0103105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxo-6-methylthiohexanoate + a standard alpha amino acid = dihomomethionine + a 2-oxo carboxylate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxo-6-methylthiohexanoate aminotransferase activity (obsolete GO:0103105)","termid":"GO:0103105"}


id: MONDO:1011849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myasthenia, non-human animal","secondary_identifiers":["OMIA:000684"],"termid":"MONDO:1011849","xrefs":{"Monarch":{"xref_id":"1011849"}}}


id: GO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II (RNAP II) regulatory transcription factor and also with the RNAP II basal transcription machinery in order to increase the frequency, rate or stability of the aggregation, arrangement and bonding together of proteins on RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC). Cofactors generally do not bind DNA, but rather mediate protein-protein interactions between activating transcription factors and the basal RNAP II transcription machinery.","definition_xrefs":["PMID:16858867","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly (obsolete GO:0001128)","synonyms":[{"name":"RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly","type":"exact"}],"termid":"GO:0001128"}


id: GO:0036108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate, a precursor of 4-amino-4-deoxy-L-arabinose (L-Ara4N).","definition_xrefs":["GOC:yaf","PMID:15695810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate metabolic process","termid":"GO:0036107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process","synonyms":[{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate anabolism","type":"exact"},{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthesis","type":"exact"},{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate formation","type":"exact"},{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate synthesis","type":"exact"},{"name":"undecaprenyl phosphate alpha-L-Ara4N biosynthesis","type":"exact"}],"termid":"GO:0036108"}


id: MONDO:0003984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the internal auditory canal, often presenting as an acoustic tumor. It may be intermixed with the vestibulocochlear nerve and may adhere to adjacent structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of ear","termid":"MONDO:0021474"},{"relation_name":"is_a","term_name":"inner ear neoplasm","termid":"MONDO:0024320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal auditory canal lipoma","secondary_identifiers":["MEDGEN:232658","NCIT:C5452","DOID:6752","UMLS:C1334226"],"synonyms":[{"name":"inner Ear lipoma","type":"exact"},{"name":"internal Ear lipoma","type":"exact"},{"name":"internal acoustic meatus lipoma","type":"exact"},{"name":"lipoma of internal acoustic meatus","type":"exact"},{"name":"lipoma of internal auditory canal","type":"exact"},{"name":"lipoma of the internal auditory canal","type":"exact"}],"termid":"MONDO:0003984","xrefs":{"Monarch":{"xref_id":"0003984"}}}


id: PBO:0116326
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of High Pi","termid":"PBO:0116326"}


id: GO:0042334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of an alternative electron acceptor, for example, nitrate.","definition_xrefs":["PMID:11029423","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taxis to electron acceptor","synonyms":[{"name":"taxis in response to electron acceptor","type":"exact"}],"termid":"GO:0042334"}


id: MONDO:0016775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lichen planus (LP) pemphigoides is a rare cross-over syndrome between lichen planus and bullous pemphigoid.","definition_xrefs":["Orphanet:254478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen planus pemphigoides","secondary_identifiers":["GARD:12677","SCTID:238653005","UMLS:C0406369","icd11.foundation:1373932539","MEDGEN:590352"],"synonyms":[{"name":"LP pemphigoides","type":"exact"}],"termid":"MONDO:0016775","xrefs":{"Monarch":{"xref_id":"0016775"}}}


id: GO:0072337
data:
  {"annotated_genes":["SJAG_01660","SJAG_01344","SJAG_05175","SJAG_05213","SJAG_03497","SJAG_03503","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015884"},{"annotations":[97386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[115102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[97935,98924,120204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[74221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"}]},"cv_name":"biological_process","definition":"The directed movement of modified amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_03497":null,"SJAG_03503":null,"SJAG_03577":null,"SJAG_05175":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"modified amino acid transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"amino acid derivative transport","type":"exact"}],"termid":"GO:0072337","terms_by_termid":{"GO:0015884":null,"GO:0071996":null,"GO:0098709":null,"GO:0098717":null,"GO:0160007":null}}


id: PBO:0065629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 7","termid":"PBO:0065629"}


id: PBO:0073142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog C, vesicle trafficking protein","termid":"PBO:0073142"}


id: MONDO:0023206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low or intermediate grade well differentiated tumor with neuroendocrine differentiation that arises from the pancreas. It is characterized by the presence of a clinical syndrome that results from hormone hypersecretion.","definition_xrefs":["NCIT:C45840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"},{"relation_name":"is_a","term_name":"functioning endocrine neoplasm","termid":"MONDO:0021120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"functional pancreatic neuroendocrine tumor","secondary_identifiers":["MEDGEN:310778","GARD:22053","Orphanet:506060","UMLS:C1708107"],"synonyms":[{"name":"functional pancreatic NET","type":"exact"},{"name":"functional pancreatic neuroendocrine tumor","type":"exact"},{"name":"functioning PNET","type":"exact"},{"name":"functioning neuroendocrine tumor of pancreas","type":"related"},{"name":"functioning neuroendocrine tumour of pancreas","type":"related"},{"name":"functioning pancreatic NET","type":"exact"},{"name":"functioning pancreatic endocrine tumor","type":"exact"},{"name":"functioning pancreatic endocrine tumour","type":"exact"},{"name":"functioning pancreatic neuroendocrine tumor","type":"exact"},{"name":"functioning pancreatic neuroendocrine tumour","type":"exact"},{"name":"functioning well differentiated pancreatic endocrine neoplasm","type":"exact"},{"name":"functioning well differentiated pancreatic endocrine tumor","type":"exact"},{"name":"functioning well differentiated pancreatic endocrine tumour","type":"exact"},{"name":"functioning well-differentiated NEN of pancreas","type":"exact"},{"name":"functioning well-differentiated neuroendocrine neoplasm of pancreas","type":"exact"},{"name":"functioning well-differentiated pancreatic NEN","type":"exact"},{"name":"functioning well-differentiated pancreatic neuroendocrine neoplasm","type":"exact"},{"name":"syndromic pancreatic NET","type":"exact"},{"name":"syndromic pancreatic neuroendocrine tumor","type":"exact"},{"name":"syndromic pancreatic neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0023206","xrefs":{"Monarch":{"xref_id":"0023206"}}}


id: PBO:0074185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 6","termid":"PBO:0074185"}


id: MONDO:0000616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"progesterone-receptor negative breast cancer","secondary_identifiers":["DOID:0060078"],"termid":"MONDO:0000616","xrefs":{"Monarch":{"xref_id":"0000616"}}}


id: GO:0071265
data:
  {"annotated_genes":["SJAG_00395","SJAG_02290","SJAG_01404","SJAG_03614","SJAG_03881","SJAG_02689","SJAG_02293","SJAG_04425","SJAG_02972","SJAG_00309","SJAG_00881","SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113053,66728,62010,69911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[102560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[59085,79582,81008,78656,82096,80137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[100398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methionine biosynthetic process","termid":"GO:0009086"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00395":null,"SJAG_00881":null,"SJAG_01404":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03881":null,"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0006520"],"is_obsolete":false,"name":"L-methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"L-methionine anabolism","type":"exact"},{"name":"L-methionine biosynthesis","type":"exact"},{"name":"L-methionine formation","type":"exact"},{"name":"L-methionine synthesis","type":"exact"}],"termid":"GO:0071265","terms_by_termid":{"GO:0019280":null,"GO:0019284":null,"GO:0019509":null,"GO:0071266":null}}


id: PBO:0109225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 6","termid":"PBO:0109225"}


id: GO:0042903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl(alpha-tubulin) + H2O = alpha-tubulin + acetate.","definition_xrefs":["PMID:12486003","PMID:12024216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"protein lysine deacetylase activity","termid":"GO:0033558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0033558","GO:0016810","GO:0003824","GO:0016787","GO:0003674","GO:0019213"],"is_obsolete":false,"name":"tubulin deacetylase activity","secondary_identifiers":["Reactome:R-HSA-5618331"],"termid":"GO:0042903"}


id: MONDO:0002892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow-growing malignant bone tumor arising from the remnants of the notochord and occurring in the base of the skull. It is characterized by a lobulated growth pattern, myxoid stroma formation, and the presence of physaliphorous cells..","definition_xrefs":["NCIT:C5453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull cancer","termid":"MONDO:0002132"},{"relation_name":"is_a","term_name":"skull base neoplasm","termid":"MONDO:0002785"},{"relation_name":"is_a","term_name":"chordoma","termid":"MONDO:0008978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"skull base chordoma","secondary_identifiers":["MEDGEN:233448","DOID:4151","UMLS:C1335975"],"synonyms":[{"name":"chordoma of skull base","type":"exact"},{"name":"chordoma of the skull base","type":"exact"},{"name":"skull base chordoma","type":"exact"}],"termid":"MONDO:0002892","xrefs":{"Monarch":{"xref_id":"0002892"}}}


id: PBO:0031770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_fermentation","termid":"PBO:0031770"}


id: MOD:01436
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to cyclo[(prolylserin)-O-yl] cysteinate.","definition_xrefs":["RESID:AA0489#CYS","PubMed:7961166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo[(prolylserin)-O-yl] cysteinate","termid":"MOD:01629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cyclo[(prolylserin)-O-yl] cysteinate (Cys)","synonyms":[{"name":"(3,6-dioxopyrrolo[4,5-a]piperazin-2-yl)methyl cysteinate","type":"exact"},{"name":"MOD_RES Cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"},{"name":"[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]methyl (2R)-2-amino-3-sulfanylpropanoate","type":"exact"},{"name":"cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"}],"termid":"MOD:01436"}


id: PBO:0082156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adaptor protein required for structural integrity of the SAGA complex; a histone acetyltransferase-coactivator complex that is involved in global regulation of gene expression through acetylation and transcription functions","termid":"PBO:0082156"}


id: GO:0043765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the repair of T/G mismatches arising from deamination of 5-methylcytosine in DNA by nicking double-stranded DNA within the sequence CT(AT)GN or NT(AT)GG next to the mismatched thymidine residue. The incision is mismatch-dependent and strand-specific, in favor of the G-containing strand. The incision serves as a starting point for subsequent excision repair by DNA polymerase I, which excises thymidine and reinserts cytidine.","definition_xrefs":["PMID:17651368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"T/G mismatch-specific endonuclease activity","synonyms":[{"name":"DNA mismatch endonuclease","type":"broad"},{"name":"V.EcoKDcm","type":"related"},{"name":"Vsr mismatch endonuclease","type":"related"},{"name":"very short patch repair protein","type":"related"}],"termid":"GO:0043765"}


id: GO:0072374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-carotene + O2 + reduced [NADPH--hemoprotein reductase] = alpha-cryptoxanthin + H(+) + H2O + oxidized [NADPH--hemoprotein reductase]. Zeinoxanthin may also be used as the substrate, in which case lutein is produced.","definition_xrefs":["EC:1.14.14.158","PMID:8837513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"carotene epsilon hydroxylase activity","termid":"GO:0072374"}


id: GO:1904488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in regulation of reactive oxygen species metabolic process.","definition_xrefs":["PMID:25961505","GO_REF:0000063","GOC:kmv","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of reactive oxygen species metabolic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1904488)","synonyms":[{"name":"regulation of ROS metabolic process by activation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by positive regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by positive regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of ROS metabolic process by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by positive regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of ROS metabolic process by stimulation of global transcription from RNA polymerase II promoter","type":"narrow"},{"name":"regulation of ROS metabolic process by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by up regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by up-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by upregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by activation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by positive regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by positive regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by positive regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by stimulation of global transcription from RNA polymerase II promoter","type":"narrow"},{"name":"regulation of reactive oxygen species metabolic process by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by up regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by up-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by upregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by activation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by positive regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by positive regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by positive regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of reactive oxygen species metabolism by stimulation of global transcription from RNA polymerase II promoter","type":"narrow"},{"name":"regulation of reactive oxygen species metabolism by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by up regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by up-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by upregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904488"}


id: GO:0044437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a vacuole, a closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete vacuolar part (obsolete GO:0044437)","synonyms":[{"name":"vacuole component","type":"exact"}],"termid":"GO:0044437"}


id: FYPO:0000792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal glycerol dehydrogenase activity","termid":"FYPO:0000792"}


id: GO:0016691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R-H + 2 chloride + H2O2 = 2 R-Cl + 2 H2O.","definition_xrefs":["EC:1.11.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"haloperoxidase activity","termid":"GO:0140905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"chloride peroxidase activity","secondary_identifiers":["MetaCyc:CHLORIDE-PEROXIDASE-RXN","GO:0016957","GO:0016958","GO:0016956","GO:0016955"],"synonyms":[{"name":"chloride:hydrogen-peroxide oxidoreductase","type":"related"},{"name":"chloroperoxidase activity","type":"related"},{"name":"cofactor-free chloroperoxidase activity","type":"narrow"},{"name":"flavin-haem chloroperoxidase activity","type":"narrow"},{"name":"flavin-heme chloroperoxidase activity","type":"narrow"},{"name":"haem chloroperoxidase activity","type":"narrow"},{"name":"heme chloroperoxidase activity","type":"narrow"},{"name":"vanadium chloroperoxidase activity","type":"narrow"}],"termid":"GO:0016691"}


id: MONDO:0002313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the cornea that is seasonal in nature.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic conjunctivitis","termid":"MONDO:0002314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vernal conjunctivitis","secondary_identifiers":["ICD9:372.13","MEDGEN:3211","SCTID:318316003","icd11.foundation:1653249836","UMLS:C0009773","ICD10CM:H10.44","DOID:2474","NCIT:C34508"],"termid":"MONDO:0002313","xrefs":{"Monarch":{"xref_id":"0002313"}}}


id: GO:0045745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G protein-coupled receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of G protein-coupled receptor signaling pathway","synonyms":[{"name":"activation of G-protein coupled receptor protein signaling pathway","type":"narrow"},{"name":"positive regulation of G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"positive regulation of G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"positive regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"positive regulation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"positive regulation of G-protein-coupled receptor protein signaling pathway","type":"exact"},{"name":"positive regulation of G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"positive regulation of GPCR protein signaling pathway","type":"exact"},{"name":"positive regulation of GPCR protein signalling pathway","type":"exact"},{"name":"stimulation of G-protein coupled receptor protein signaling pathway","type":"narrow"},{"name":"up regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"up-regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"upregulation of G-protein coupled receptor protein signaling pathway","type":"exact"}],"termid":"GO:0045745"}


id: internal:related
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related","termid":"internal:related"}


id: PBO:0031896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Tor2","termid":"PBO:0031896"}


id: PBO:0051334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-30","termid":"PBO:0051334"}


id: PBO:0054718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2127","termid":"PBO:0054718"}


id: PBO:0027205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_heat_shock","termid":"PBO:0027205"}


id: MONDO:0008316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary thrombophilia due to congenital protein C deficiency","termid":"MONDO:0019145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombophilia due to protein C deficiency, autosomal dominant","secondary_identifiers":["UMLS:C2674321","MEDGEN:436138","GARD:18574","DOID:0111909","OMIM:176860"],"synonyms":[{"name":"Proc deficiency, autosomal dominant","type":"related"},{"name":"Protein C deficiency, acquired","type":"related"},{"name":"Protein C deficiency, autosomal dominant","type":"related"},{"name":"THPH3","type":"related"},{"name":"thrombophilia 3 due to protein C deficiency, autosomal dominant","type":"exact"},{"name":"thrombophilia due to PROTEIN C deficiency, autosomal dominant","type":"related"},{"name":"thrombophilia due to protein C deficiency, autosomal dominant","type":"exact"}],"termid":"MONDO:0008316","xrefs":{"Monarch":{"xref_id":"0008316"}}}


id: PBO:0086136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for membrane insertion of C-terminus of Cox2p; mitochondrial integral inner membrane protein; interacts genetically and physically with Mss2p and Pnt1p; similar to S. cerevisiae Oxa1, N. crassa Oxa2p, and E. coli YidC; respiratory defect of the null mutant is functionally complemented by human COX18 carrying the N-terminal 54 amino acids of S. cerevisiae Cox18p","termid":"PBO:0086136"}


id: GO:0019716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The monomethylation of the N-terminal alanine of proteins to form the derivative peptidyl-N-methyl-L-alanine.","definition_xrefs":["RESID:AA0061"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-alanine monomethylation (obsolete GO:0019716)","termid":"GO:0019716"}


id: MONDO:0009794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oral-facial-digital syndrome, type 4 is characterized by lingual hamartoma, postaxial polysyndactyly of hands and feet, and mesomelic shortening of the legs with supinate equinovarus feet.","definition_xrefs":["Orphanet:2753"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome IV","secondary_identifiers":["MEDGEN:98358","SCTID:239031000","GARD:816","UMLS:C0406727","MESH:C537133","DOID:0060374","OMIM:258860"],"synonyms":[{"name":"Baraitser-Burn syndrome","type":"exact"},{"name":"Mohr-Majewski syndrome","type":"exact"},{"name":"OFD syndrome 4","type":"related"},{"name":"OFD4","type":"exact"},{"name":"Ofd syndrome with tibial defects","type":"related"},{"name":"Ofd syndrome, Baraitser-Burn type","type":"related"},{"name":"Ofds 4","type":"related"},{"name":"oral facial digital syndrome 4","type":"related"},{"name":"oral facial digital syndrome type 4","type":"related"},{"name":"oral-Facial-digital syndrome, type 4","type":"related"},{"name":"oral-facial-digital syndrome type 4","type":"exact"},{"name":"orofaciodigital syndrome 4","type":"related"},{"name":"orofaciodigital syndrome IV","type":"exact"},{"name":"orofaciodigital syndrome type 4","type":"exact"},{"name":"orofaciodigital syndrome type IV","type":"exact"},{"name":"orofaciodigital syndrome with tibial dysplasia","type":"related"}],"termid":"MONDO:0009794","xrefs":{"Monarch":{"xref_id":"0009794"}}}


id: PBO:0091534
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding affinity for ADP-Pi-bound F-actin Kd 220 nM","termid":"PBO:0091534"}


id: PBO:0073676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein gamma","termid":"PBO:0073676"}


id: GO:1901000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to salt stress.","definition_xrefs":["PMID:22627139","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to osmotic stress","termid":"GO:0047484"},{"relation_name":"regulates","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to salt stress","synonyms":[{"name":"regulation of response to ionic osmotic stress","type":"exact"},{"name":"regulation of salinity response","type":"exact"}],"termid":"GO:1901000"}


id: PBO:0055217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2643","termid":"PBO:0055217"}


id: PBO:0088660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 7, Pre10","termid":"PBO:0088660"}


id: PBO:0052281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 7A","termid":"PBO:0052281"}


id: PBO:0047668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flagellum associated containing coiled-coil domains 1","termid":"PBO:0047668"}


id: PBO:0060891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropilin and tolloid like 2","termid":"PBO:0060891"}


id: PBO:0079828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ULK4 pseudogene 3","termid":"PBO:0079828"}


id: GO:0052701
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113499,105528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[72671,105529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving compounds derived from histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modified histidine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular histidine derivative metabolic process","type":"exact"},{"name":"cellular histidine derivative metabolism","type":"exact"},{"name":"cellular modified histidine metabolic process","type":"exact"},{"name":"cellular modified histidine metabolism","type":"exact"},{"name":"histidine derivative metabolic process","type":"exact"},{"name":"modified histidine metabolism","type":"exact"}],"termid":"GO:0052701","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: GO:0034426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a etioplast and form the etioplast envelope.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"etioplast envelope","termid":"GO:0034425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"etioplast membrane","termid":"GO:0034426"}


id: PBO:0085242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; potential role in the secretory pathway; CPR8 has a paralog, CPR4, that arose from the whole genome duplication","termid":"PBO:0085242"}


id: GO:2000715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:0071959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"regulation of maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:2000715"}


id: MONDO:0014819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Robinow syndrome in which the cause of the disease is a mutation in the DVL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Robinow syndrome","termid":"MONDO:0008389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Robinow syndrome 3","secondary_identifiers":["GARD:18549","UMLS:C4225164","DOID:0060767","MEDGEN:907878","OMIM:616894"],"synonyms":[{"name":"DRS3","type":"exact"},{"name":"DVL3 Robinow syndrome","type":"exact"},{"name":"Robinow syndrome caused by mutation in DVL3","type":"exact"},{"name":"Robinow syndrome, autosomal dominant 3","type":"exact"},{"name":"Robinow syndrome, autosomal dominant type 3","type":"exact"},{"name":"autosomal dominant Robinow syndrome type 3","type":"exact"}],"termid":"MONDO:0014819","xrefs":{"Monarch":{"xref_id":"0014819"}}}


id: SO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region essential for the specific initiation of transcription at a defined location in a DNA molecule, although this location might not be one single base. It is recognized by a specific RNA polymerase(RNAP)-holoenzyme, and this recognition is not necessarily autonomous.","definition_xrefs":["PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokaryotic_promoter","synonyms":[{"name":"Prokaryotic promoter","type":"exact"}],"termid":"SO:0002222"}


id: PBO:0109263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrograde transport protein, Golgi to ER, Erd1/Gmn2","termid":"PBO:0109263"}


id: PBO:0060427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGFI-A binding protein 2","termid":"PBO:0060427"}


id: GO:0060301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of the activity of a molecule that controls the survival, growth, differentiation and effector function of tissues and cells.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytokine activity (obsolete GO:0060301)","termid":"GO:0060301"}


id: PBO:0119631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIK1 antisense RNA 3","termid":"PBO:0119631"}


id: PBO:0041212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor","termid":"PBO:0041212"}


id: PBO:0047821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O1B (pseudogene)","termid":"PBO:0047821"}


id: MONDO:0009994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rapidly growing malignant mesenchymal neoplasm. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma resembling an alveolar growth pattern. The tumor usually presents in the extremities.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"alveolar rhabdomyosarcoma","secondary_identifiers":["MEDGEN:61651","MESH:D018232","EFO:0000248","ICDO:8920/3","SCTID:404053004","Orphanet:99756","OMIM:268220","DOID:4051","UMLS:C0206655","icd11.foundation:1742058067","ICD9:171.9","ONCOTREE:ARMS","GARD:4701","MedDRA:10065867","HP:0006779","NCIT:C3749"],"synonyms":[{"name":"ARMS","type":"exact"},{"name":"RMS2","type":"related"},{"name":"alveolar childhood rhabdomyosarcoma","type":"exact"},{"name":"alveolar rhabdomyosarcoma","type":"exact"},{"name":"alveolar rhabdomyosarcoma (disease)","type":"exact"},{"name":"alveolar rhabdomyosarcoma (morphologic abnormality)","type":"exact"},{"name":"arms","type":"exact"},{"name":"monomorphous round cell rhabdomyosarcoma","type":"exact"},{"name":"paediatric alveolar rhabdomyosarcoma","type":"exact"},{"name":"pediatric alveolar rhabdomyosarcoma","type":"exact"},{"name":"rhabdomyosarcoma 2","type":"related"},{"name":"rhabdomyosarcoma 2, alveolar, somatic mutation","type":"exact"},{"name":"rhabdomyosarcoma alveolar","type":"related"},{"name":"rhabdomyosarcoma type 2","type":"exact"},{"name":"rhabdomyosarcoma, alveolar","type":"related"},{"name":"rhabdomyosarcoma, alveolar, somatic mutation","type":"exact"}],"termid":"MONDO:0009994","xrefs":{"Monarch":{"xref_id":"0009994"}}}


id: SO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of an experimentally derived feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimental_feature_attribute","synonyms":[{"name":"experimental feature attribute","type":"related"}],"termid":"SO:0001684"}


id: PBO:0004603
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP-Like Protein","termid":"PBO:0004603"}


id: GO:0043162
data:
  {"annotated_genes":["SJAG_01981","SJAG_01586","SJAG_02584","SJAG_03783","SJAG_02912","SJAG_01528","SJAG_04024","SJAG_03250","SJAG_00900","SJAG_05303","SJAG_01242","SJAG_03892","SJAG_04349","SJAG_04151","SJAG_04936","SJAG_01281","SJAG_00416","SJAG_04489","SJAG_02117","SJAG_03756","SJAG_04912","SJAG_00821"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98412,105049,114788],"is_not":false,"summary":null,"term":"GO:0043162"},{"annotations":[80258,79513,89766,75277,93339,93478,99833,111325,75256,72833,116689,73878,79979,89939,73914,72663,97826,102781,108491],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin, via the multivesicular body (MVB) sorting pathway; ubiquitin-tagged proteins are sorted into MVBs, and delivered to a lysosome/vacuole for degradation.","definition_xrefs":["GOC:jl","PMID:11511343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01528":null,"SJAG_01586":null,"SJAG_01981":null,"SJAG_02117":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04024":null,"SJAG_04151":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05303":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ubiquitin-dependent protein breakdown via the multivesicular body pathway","type":"exact"},{"name":"ubiquitin-dependent protein catabolic process via the MVB pathway","type":"exact"},{"name":"ubiquitin-dependent protein catabolism via the MVB pathway","type":"exact"},{"name":"ubiquitin-dependent protein degradation via the multivesicular body pathway","type":"exact"}],"termid":"GO:0043162","terms_by_termid":{"GO:0043162":null,"GO:0043328":null}}


id: MONDO:0003706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adult astrocytic tumor","termid":"MONDO:0002503"},{"relation_name":"is_a","term_name":"adult brainstem glioma","termid":"MONDO:0003153"},{"relation_name":"is_a","term_name":"brain stem astrocytic neoplasm","termid":"MONDO:0003173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult brainstem astrocytoma","secondary_identifiers":["DOID:5922","MEDGEN:233962","UMLS:C1332191","NCIT:C6954"],"synonyms":[{"name":"adult brain stem astrocytoma","type":"exact"},{"name":"adult brainstem astrocytoma","type":"exact"}],"termid":"MONDO:0003706","xrefs":{"Monarch":{"xref_id":"0003706"}}}


id: PBO:0076692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCEAL8 pseudogene 1","termid":"PBO:0076692"}


id: PBO:0068800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 37, pseudogene","termid":"PBO:0068800"}


id: GO:0035145
data:
  {"annotated_genes":["SJAG_02879","SJAG_00888","SJAG_05014","SJAG_04025","SJAG_01252","SJAG_01852"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72214,78947,81994,94202,105061,107812],"is_not":false,"summary":null,"term":"GO:0035145"}]},"cv_name":"cellular_component","definition":"A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.","definition_xrefs":["PMID:11532962","PMID:11743026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_01252":null,"SJAG_01852":null,"SJAG_02879":null,"SJAG_04025":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"exon-exon junction complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"EJC","type":"exact"},{"name":"exon junction complex","type":"exact"}],"termid":"GO:0035145","terms_by_termid":{"GO:0035145":null}}


id: MONDO:0009389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperlysinemia","termid":"MONDO:0009388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hyperlysinemia due to defect in lysine transport into mitochondria","secondary_identifiers":["GARD:15183","MESH:C565499","OMIM:238710","MEDGEN:341010","UMLS:C1855927"],"synonyms":[{"name":"hyperlysinemia due to defect in lysine TRANSPORT into mitochondria","type":"related"}],"termid":"MONDO:0009389","xrefs":{"Monarch":{"xref_id":"0009389"}}}


id: PBO:0047729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructosamine 3 kinase related protein","termid":"PBO:0047729"}


id: PBO:0045983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"euchromatic histone lysine methyltransferase 1","termid":"PBO:0045983"}


id: PBO:0089644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, magnesium ion Mme1","termid":"PBO:0089644"}


id: PBO:0040388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit B2","termid":"PBO:0040388"}


id: PBO:0074639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 31B","termid":"PBO:0074639"}


id: PBO:0034471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_protein_coding_gene","termid":"PBO:0034471"}


id: PBO:0085627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in export of proteins from the endoplasmic reticulum; ERV15 has a paralog, ERV14, that arose from the whole genome duplication","termid":"PBO:0085627"}


id: PBO:0057182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 337","termid":"PBO:0057182"}


id: FYPO:0004547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitochondrion","termid":"FYPO:0004336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to mitochondrion","synonyms":[{"name":"increased protein localisation to mitochondrion","type":"exact"},{"name":"increased protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"increased protein localization to mitochondrion during vegetative growth","type":"exact"}],"termid":"FYPO:0004547"}


id: GO:1990186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of lymphatic vessels.","definition_xrefs":["PMID:23897233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"is_a","term_name":"lymphatic vascular process in circulatory system","termid":"GO:1990183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphatic vessel size","synonyms":[{"name":"regulation of collecting lymphatic vessel size","type":"narrow"}],"termid":"GO:1990186"}


id: FYPO:0002796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein degradation is abnormal when the cell is subject to nitrogen starvation. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein degradation during nitrogen starvation","synonyms":[{"name":"abnormal protein breakdown during nitrogen starvation","type":"exact"},{"name":"abnormal protein catabolic process during nitrogen starvation","type":"exact"},{"name":"abnormal protein catabolism during nitrogen starvation","type":"exact"},{"name":"abnormal protein degradation during nitrogen depletion","type":"exact"},{"name":"abnormal protein degradation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002796"}


id: PBO:0029418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_palmitoylation_during_meiosis","termid":"PBO:0029418"}


id: PBO:0047100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 151 member B","termid":"PBO:0047100"}


id: GO:0106044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a sugar or dicarbonyl from a glycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"guanine deglycation","termid":"GO:0106044"}


id: PBO:0057883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3187","termid":"PBO:0057883"}


id: PBO:0007964
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yeast Phosphatase Activator","termid":"PBO:0007964"}


id: PBO:0051198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-16 (pseudogene)","termid":"PBO:0051198"}


id: GO:0044385
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane. Occurring in a host cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete integral to membrane of host cell (obsolete GO:0044385)","termid":"GO:0044385"}


id: PBO:0084869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S19 ribosomal protein","termid":"PBO:0084869"}


id: GO:0032637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-8 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-8 production","secondary_identifiers":["GO:0072606","GO:0042228"],"synonyms":[{"name":"IL-8 production","type":"exact"},{"name":"interleukin-8 biosynthetic process","type":"narrow"},{"name":"interleukin-8 secretion","type":"narrow"}],"termid":"GO:0032637"}


id: FYPO:0000648
data:
  {"alleles_by_uniquename":{"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04280:allele-3":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121466,121539,121540,121543],"is_not":false,"summary":null,"term":"FYPO:0000648"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable but has an abnormally low volume. Note that small viable cells may result from a cell cycle size regulation defect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"has_part","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02013":null,"SJAG_03048":null,"SJAG_04280":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-3","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"viable small vegetative cell","references_by_uniquename":{"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_03048","SJAG_04280","SJAG_02013"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","pyp1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"mitosis with small cell size","type":"related"},{"name":"reduced size at cell division","type":"related"},{"name":"small viable vegetative cell","type":"exact"},{"name":"viable small cell during vegetative growth","type":"exact"},{"name":"viable small vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000648","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0004498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: calcidiol + H+ + NADPH + O2 = calcitriol + H2O + NADP+.","definition_xrefs":["RHEA:20573","EC:1.14.15.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"calcidiol 1-monooxygenase activity","secondary_identifiers":["Reactome:R-HSA-209868","Reactome:R-HSA-5602186","KEGG_REACTION:R03610","MetaCyc:CALCIDIOL-1-MONOOXYGENASE-RXN"],"synonyms":[{"name":"1-hydroxylase-25-hydroxyvitamin D3 activity","type":"related"},{"name":"25-OHD-1 alpha-hydroxylase activity","type":"related"},{"name":"25-hydroxy D3-1alpha-hydroxylase activity","type":"related"},{"name":"25-hydroxy vitamin D3 1-alpha-hydroxylase activity","type":"exact"},{"name":"25-hydroxycholecalciferol 1-hydroxylase activity","type":"exact"},{"name":"25-hydroxycholecalciferol 1-monooxygenase activity","type":"related"},{"name":"25-hydroxycholecalciferol 1alpha-hydroxylase activity","type":"related"},{"name":"25-hydroxycholecalciferol-1-hydroxylase activity","type":"related"},{"name":"25-hydroxyvitamin D-1 alpha hydroxylase activity","type":"related"},{"name":"25-hydroxyvitamin D3 1alpha-hydroxylase activity","type":"related"},{"name":"calcidiol,NADPH:oxygen oxidoreductase (1-hydroxylating)","type":"exact"},{"name":"cytochrome P450 CYP27B","type":"narrow"}],"termid":"GO:0004498"}


id: GO:0007063
data:
  {"annotated_genes":["SJAG_00823","SJAG_01825","SJAG_00433","SJAG_01716","SJAG_03591","SJAG_00369","SJAG_05978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102726],"is_not":false,"summary":null,"term":"GO:0007063"},{"annotations":[108186,109339,108508,117318,93580,108284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045875"},{"annotations":[109341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045876"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sister chromatid cohesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"regulates","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00433":null,"SJAG_00823":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007063","terms_by_termid":{"GO:0007063":null,"GO:0045875":null,"GO:0045876":null}}


id: SO:0001188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases attached to a repeating unit made of 'locked' deoxyribose rings connected to a phosphate backbone. The deoxyribose unit's conformation is 'locked' by a 2'-C,4'-C-oxymethylene link.","definition_xrefs":["CHEBI:48010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNA","termid":"SO:0001188"}


id: GO:0070663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte proliferation","termid":"GO:0070663"}


id: GO:0046136
data:
  {"annotated_genes":["SJAG_02406","SJAG_03538"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90859,115655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"positive regulation of vitamin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of vitamin metabolic process","type":"narrow"},{"name":"positive regulation of vitamin metabolism","type":"exact"},{"name":"stimulation of vitamin metabolic process","type":"narrow"},{"name":"up regulation of vitamin metabolic process","type":"exact"},{"name":"up-regulation of vitamin metabolic process","type":"exact"},{"name":"upregulation of vitamin metabolic process","type":"exact"}],"termid":"GO:0046136","terms_by_termid":{"GO:0090180":null}}


id: MONDO:0016410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central or secondary congenital hypothyroidism is a type of permanent congenital hypothyroidism characterized by permanent thyroid hormone deficiency that is present from birth and secondary to a disorder in the thyroid-stimulating hormone (TSH) - thyrotropin-releasing hormone (TRH) system.","definition_xrefs":["Orphanet:226298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permanent congenital hypothyroidism","termid":"MONDO:0016408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central congenital hypothyroidism","secondary_identifiers":["NANDO:1200390","icd11.foundation:848364569","GARD:12280","MEDGEN:927869","UMLS:C4302200","NANDO:2200332","NANDO:2200340","NCIT:C113144"],"synonyms":[{"name":"TSH deficiency","type":"exact"},{"name":"central hypothyroidism","type":"exact"},{"name":"hypothalamic-pituitary hypothyroidism","type":"exact"},{"name":"secondary hypothyroidism","type":"exact"},{"name":"thyroid stimulating hormone deficiency","type":"exact"},{"name":"thyrotropin deficiency","type":"exact"}],"termid":"MONDO:0016410","xrefs":{"Monarch":{"xref_id":"0016410"}}}


id: MONDO:0024299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rickets","termid":"MONDO:0005520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D-dependent rickets","secondary_identifiers":["SCTID:68295002","NANDO:2100144","DOID:0080883","MEDGEN:526251","NANDO:1200781","NANDO:2200401","UMLS:C0221468"],"synonyms":[{"name":"VDDR","type":"exact"}],"termid":"MONDO:0024299","xrefs":{"Monarch":{"xref_id":"0024299"}}}


id: MONDO:0013281
data:
  {"annotated_genes":["SJAG_01071"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88004],"is_not":false,"summary":null,"term":"MONDO:0013281"}]},"cv_name":"mondo","definition":"COG4-CDG is an extremely rare form of CDG syndrome characterized clinically in the single reported case to date by seizures, some dysmorphic features, axial hyponia, slight peripheral hypertonia and hyperreflexia.","definition_xrefs":["Orphanet:263501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"defect in conserved oligomeric Golgi complex","termid":"MONDO:0017750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01071":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"COG4-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12412","MEDGEN:929221","SCTID:718751000","UMLS:C4303552","OMIM:613489","DOID:0070262"],"synonyms":[{"name":"CDG IIj","type":"related"},{"name":"CDG syndrome type IIj","type":"exact"},{"name":"CDG-IIj","type":"exact"},{"name":"CDG2J","type":"exact"},{"name":"COG4-CDG","type":"exact"},{"name":"COG4-CDG (CDG-IIj)","type":"related"},{"name":"COG4-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIj","type":"exact"},{"name":"congenital disorder of glycosylation type 2j","type":"exact"},{"name":"congenital disorder of glycosylation type IIj","type":"exact"},{"name":"congenital disorder of glycosylation, type IIj","type":"related"}],"termid":"MONDO:0013281","terms_by_termid":{"MONDO:0013281":null},"xrefs":{"Monarch":{"xref_id":"0013281"}}}


id: GO:0090112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which COPII vesicle coat proteins are disassembled, and released.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle uncoating","termid":"GO:0072319"},{"relation_name":"part_of","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"COPII vesicle uncoating","termid":"GO:0090112"}


id: GO:0003809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Gly; activates fibrinogen to fibrin and releases fibrinopeptide A and B.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thrombin activity (obsolete GO:0003809)","synonyms":[{"name":"E thrombin","type":"related"},{"name":"activated blood-coagulation factor II","type":"related"},{"name":"beta-thrombin","type":"related"},{"name":"blood-coagulation factor IIa","type":"related"},{"name":"factor IIa","type":"related"},{"name":"fibrinogenase activity","type":"related"},{"name":"gamma-thrombin","type":"related"},{"name":"thrombase activity","type":"related"},{"name":"thrombin activity","type":"exact"},{"name":"thrombin-C","type":"related"},{"name":"thrombofort","type":"related"},{"name":"topical","type":"related"},{"name":"tropostasin","type":"related"}],"termid":"GO:0003809"}


id: GO:0010427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to abscisic acid, a plant hormone that regulates aspects of plant growth.","definition_xrefs":["PMID:17347412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid binding","termid":"GO:0019840"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"abscisic acid binding","synonyms":[{"name":"ABA binding","type":"related"},{"name":"abscisate binding","type":"related"}],"termid":"GO:0010427"}


id: MONDO:0016464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type B insulin-resistance syndrome belongs to the group of extreme insulin-resistance syndromes (which includes leprechaunism, the lipodystrophies, Rabson-Mendenhall syndrome, and type A insulin resistance syndrome) and occurs in the context of immune dysfunction.","definition_xrefs":["Orphanet:2298"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"insulin-resistance syndrome type B","secondary_identifiers":["UMLS:C0342337","MEDGEN:574967","icd11.foundation:408487090","GARD:3009"],"synonyms":[{"name":"insulin-resistance type B","type":"related"}],"termid":"MONDO:0016464","xrefs":{"Monarch":{"xref_id":"0016464"}}}


id: PBO:0054684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2092","termid":"PBO:0054684"}


id: GO:1990818
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99225],"is_not":false,"summary":null,"term":"GO:1990818"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:26083598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-arginine transmembrane export from vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990818","terms_by_termid":{"GO:1990818":null}}


id: PBO:0109811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane dislocase Msp1/Yta4","termid":"PBO:0109811"}


id: SO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which increases the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_level_variant","termid":"SO:0001553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_translational_product_level","synonyms":[{"name":"increase translational product level","type":"exact"}],"termid":"SO:0001556"}


id: PBO:0081459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 326","termid":"PBO:0081459"}


id: PATO:0002054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along transverse axis.","definition_xrefs":["PATOC:msp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laterally compressed","synonyms":[{"name":"laterally flattened","type":"exact"},{"name":"transversely flattened","type":"related"}],"termid":"PATO:0002054"}


id: GO:0009580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thylakoid (sensu Bacteria) (obsolete GO:0009580)","synonyms":[{"name":"thylakoid (sensu Bacteria)","type":"exact"}],"termid":"GO:0009580"}


id: GO:1903247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of adrenergic receptor signaling pathway involved in positive regulation of heart rate.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:rl","PMID:17242280","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:1903247)","synonyms":[{"name":"activation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"activation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"activation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"activation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"activation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"positive regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"positive regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"positive regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"positive regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"positive regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"positive regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"up regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"up regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"up-regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up-regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up-regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up-regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"up-regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up-regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up-regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"upregulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"upregulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"upregulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"upregulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"upregulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"upregulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"upregulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:1903247"}


id: PR:P14068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exportin-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01176","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.17","secondary_identifiers":["UniProtKB:P14068"],"synonyms":[{"name":"Spom972h-XPO1","type":"exact"},{"name":"caffeine resistance protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"chromosome region maintenance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P14068"}


id: GO:0007616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The memory process that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"memory","termid":"GO:0007613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long-term memory","secondary_identifiers":["Wikipedia:Long-term_memory"],"termid":"GO:0007616"}


id: PBO:0048458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC-rich sequence DNA-binding factor 2","termid":"PBO:0048458"}


id: PBO:0070894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 2","termid":"PBO:0070894"}


id: PBO:0076076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatid perinuclear RNA binding protein","termid":"PBO:0076076"}


id: MONDO:0020768
data:
  {"annotated_genes":["SJAG_02016","SJAG_04882","SJAG_03811"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87200,87201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010577"},{"annotations":[88989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010378"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02016":null,"SJAG_03811":null,"SJAG_04882":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked deafness","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:304500"],"synonyms":[{"name":"DFNX","type":"exact"},{"name":"X-linked deafness","type":"exact"},{"name":"deafness, X-linked","type":"exact"},{"name":"deafness, X-linked, DFN","type":"exact"}],"termid":"MONDO:0020768","terms_by_termid":{"MONDO:0010378":null,"MONDO:0010577":null},"xrefs":{"Monarch":{"xref_id":"0020768"}}}


id: PBO:0042559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 1","termid":"PBO:0042559"}


id: MONDO:0018116
data:
  {"annotated_genes":["SJAG_02954","SJAG_01784","SJAG_02951","SJAG_03818"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87849,87847,87848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009257"}]},"cv_name":"mondo","definition":"Galactosemia is a group of rare genetic metabolic disorders characterized by impaired galactose metabolism resulting in a range of variable manifestations encompassing a severe, life-threatening disease (classic galactosemia), a rare mild form (galactokinase deficiency) causing cataract, and a very rare form with variable severity (galactose epimerase deficiency) resembling classic galactosemia in the severe form.","definition_xrefs":["Orphanet:352"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"disorder of galactose metabolism","termid":"MONDO:0017690"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"galactosemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:190749000","MEDGEN:8943","SCTID:190745006","ICD9:271.1","MedDRA:10017604","MESH:D005693","GARD:2424","NCIT:C84723","DOID:9870","OMIMPS:230400","NORD:1170","UMLS:C0016952"],"synonyms":[{"name":"galactosaemia","type":"exact"},{"name":"galactose intolerance","type":"exact"},{"name":"galactosemia","type":"exact"}],"termid":"MONDO:0018116","terms_by_termid":{"MONDO:0009257":null,"MONDO:0009258":null},"xrefs":{"Monarch":{"xref_id":"0018116"}}}


id: PBO:0063085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 4","termid":"PBO:0063085"}


id: GO:0050263
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045437"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-D-ribosylpyrimidine + H2O = D-ribose + a pyrimidine.","definition_xrefs":["MetaCyc:RIBOSYLPYRIMIDINE-NUCLEOSIDASE-RXN","EC:3.2.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"ribosylpyrimidine nucleosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:56816"],"synonyms":[{"name":"N-ribosylpyrimidine nucleosidase activity","type":"related"},{"name":"N-ribosylpyrimidine ribohydrolase activity","type":"related"},{"name":"RihB","type":"related"},{"name":"YeiK","type":"related"},{"name":"nucleoside ribohydrolase activity","type":"broad"},{"name":"pyrimidine nucleosidase activity","type":"related"},{"name":"pyrimidine-nucleoside ribohydrolase activity","type":"related"}],"termid":"GO:0050263","terms_by_termid":{"GO:0045437":null}}


id: GO:0020015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle found in organisms from the order Kinetoplastida that houses the enzymes of glycolysis.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005575","GO:0005777","GO:0005737"],"is_obsolete":false,"name":"glycosome","secondary_identifiers":["Wikipedia:Glycosome"],"termid":"GO:0020015"}


id: GO:0000729
data:
  {"annotated_genes":["SJAG_05373","SJAG_01938","SJAG_01878","SJAG_01677","SJAG_01076","SJAG_01832","SJAG_05295","SJAG_03898","SJAG_02698","SJAG_00640"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74008,74640,81747,90354,90983,97871,113686],"is_not":false,"summary":null,"term":"GO:0000729"},{"annotations":[109683,118788,81164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000706"}]},"cv_name":"biological_process","definition":"The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01076":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02698":null,"SJAG_03898":null,"SJAG_05295":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"DNA double-strand break processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000729","terms_by_termid":{"GO:0000706":null,"GO:0000729":null}}


id: PBO:0071991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 20","termid":"PBO:0071991"}


id: PBO:0038672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 6","termid":"PBO:0038672"}


id: PBO:0091980
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase Required for RNAi-mediated heterochromatin assembly","termid":"PBO:0091980"}


id: PR:Q9USL1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THO complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR22839:SF0","OMA:SCHPO04432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C18B5.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.10c","secondary_identifiers":["UniProtKB:Q9USL1"],"synonyms":[{"name":"Spom972h-THOC3","type":"exact"}],"termid":"PR:Q9USL1"}


id: PBO:0030828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoribosylformylglycinamidine_cyclo-ligase_activity","termid":"PBO:0030828"}


id: PBO:0029372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0029372"}


id: GO:0075272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of zygosporangium development","termid":"GO:0075272"}


id: PBO:0054848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2262","termid":"PBO:0054848"}


id: PBO:0050363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 66","termid":"PBO:0050363"}


id: GO:0022036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a rhombomere cell.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere cell differentiation","termid":"GO:0022036"}


id: PBO:0117401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 278","termid":"PBO:0117401"}


id: GO:0033661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of reactive oxygen species produced by the host as part of its innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont defense to host-produced reactive oxygen species","termid":"GO:0052164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated defense to host-produced reactive oxygen species","synonyms":[{"name":"down regulation by organism of defense-related host metabolic burst","type":"exact"},{"name":"down-regulation by organism of defense-related host oxidative burst","type":"exact"},{"name":"downregulation by organism of defense-related host AOS production","type":"exact"},{"name":"negative regulation by organism of defense-related host ROI production","type":"exact"},{"name":"negative regulation by organism of defense-related host ROS production","type":"exact"},{"name":"negative regulation by organism of defense-related host reactive oxidative species production","type":"exact"},{"name":"negative regulation by organism of defense-related host reactive oxygen intermediate production","type":"exact"},{"name":"negative regulation by organism of defense-related host respiratory burst","type":"exact"},{"name":"negative regulation by symbiont of defense-related host reactive oxygen species production","type":"exact"},{"name":"suppression by symbiont of defense-related host reactive oxygen species production","type":"related"}],"termid":"GO:0033661"}


id: GO:0051676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pullulan, a neutral linear polysaccharide composed of repeating units of maltotriose joined by alpha-(1,6)-linkages.","definition_xrefs":["PMID:15013381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"pullulan metabolic process","synonyms":[{"name":"pullulan metabolism","type":"exact"}],"termid":"GO:0051676"}


id: PR:O13658
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pho7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C27B12.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.11c","synonyms":[{"name":"Spom972h-pho7","type":"exact"}],"termid":"PR:O13658"}


id: PBO:0047570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 21","termid":"PBO:0047570"}


id: GO:0035348
data:
  {"annotated_genes":["SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59899],"is_not":false,"summary":null,"term":"GO:0035348"}]},"cv_name":"biological_process","definition":"The process in which acetyl-CoA is transported across a membrane. Acetyl-CoA is a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis.","definition_xrefs":["GO:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA transport","termid":"GO:0015876"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"acetyl-CoA transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"acetyl-CoA membrane transport","type":"exact"}],"termid":"GO:0035348","terms_by_termid":{"GO:0035348":null}}


id: GO:0002467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation.","definition_xrefs":["GOC:jal","GO_REF:0000022","ISBN:081533642X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germinal center formation","termid":"GO:0002467"}


id: PBO:0027468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endocytosis","termid":"PBO:0027468"}


id: PBO:0071287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 10","termid":"PBO:0071287"}


id: MONDO:0006766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Impaired ambulation not attributed to sensory impairment or motor weakness. frontal lobe disorders; basal ganglia diseases (e.g., parkinsonian disorders); dementia, multi-infarct; alzheimer disease; and other conditions may be associated with gait apraxia.","definition_xrefs":["MESH:D020235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apraxia","termid":"MONDO:0000665"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gait apraxia","secondary_identifiers":["MEDGEN:266930","MedDRA:10070635","DOID:4260","UMLS:C1510417"],"synonyms":[{"name":"Gait apraxia (finding)","type":"exact"}],"termid":"MONDO:0006766","xrefs":{"Monarch":{"xref_id":"0006766"}}}


id: PBO:0113522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Upstream serine/threonine kinase for the SNF1 complex; plays a role in pseudohyphal growth; partially redundant with Elm1p and Tos3p; members of this family have functional orthology with LKB1, a mammalian kinase associated with Peutz-Jeghers cancer-susceptibility syndrome; SAK1 has a paralog, TOS3, that arose from the whole genome duplication","termid":"PBO:0113522"}


id: PBO:0067879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 181","termid":"PBO:0067879"}


id: PBO:0046012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 7","termid":"PBO:0046012"}


id: PBO:0056861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIB E3 ubiquitin protein ligase 1","termid":"PBO:0056861"}


id: MONDO:0021271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A villous adenoma that involves the colon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"villous adenoma","termid":"MONDO:0000502"},{"relation_name":"is_a","term_name":"colon adenoma","termid":"MONDO:0000527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"villous adenoma of colon","secondary_identifiers":["UMLS:C0149862","SCTID:309084001","MEDGEN:56207","NCIT:C3495"],"synonyms":[{"name":"colon villous adenoma","type":"exact"},{"name":"colonic villous adenoma","type":"exact"},{"name":"villous adenoma of the colon","type":"exact"}],"termid":"MONDO:0021271","xrefs":{"Monarch":{"xref_id":"0021271"}}}


id: PBO:0111532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 3","termid":"PBO:0111532"}


id: FYPO:0000360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA localization is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal RNA localization","termid":"FYPO:0003057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal RNA localization during vegetative growth","synonyms":[{"name":"RNA localization: abnormal","type":"related"},{"name":"abnormal RNA localisation during vegetative growth","type":"exact"},{"name":"abnormal RNA localization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000360"}


id: GO:0031502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity; usually includes members of the PMT1 and PMT2 protein subfamilies.","definition_xrefs":["GOC:mah","GOC:pr","PMID:15948957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005783","GO:0005575","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","synonyms":[{"name":"PMT family mannosyltransferase complex","type":"related"},{"name":"protein O-mannosyltransferase complex","type":"exact"}],"termid":"GO:0031502"}


id: GO:0050471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O3-acetyl-L-serine + uracil = 3-(uracil-1-yl)-L-alanine + acetate.","definition_xrefs":["RHEA:11496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"uracilylalanine synthase activity","secondary_identifiers":["EC:2.5.1.53","MetaCyc:RXN-7541"],"synonyms":[{"name":"3-O-acetyl-L-serine:uracil 1-(2-amino-2-carboxyethyl)transferase activity","type":"related"},{"name":"O(3)-acetyl-L-serine acetate-lyase (adding uracil) activity","type":"related"},{"name":"O3-acetyl-L-serine acetate-lyase (adding uracil)","type":"related"},{"name":"O3-acetyl-L-serine:uracil 1-(2-amino-2-carboxyethyl)transferase activity","type":"related"},{"name":"isowillardiine synthase activity","type":"related"},{"name":"willardiine synthase activity","type":"related"}],"termid":"GO:0050471"}


id: PBO:0111420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo8","termid":"PBO:0111420"}


id: GO:0047140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidized glutathione + CoA = reduced glutathione + CoA-glutathione.","definition_xrefs":["EC:1.8.4.3","MetaCyc:1.8.4.3-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutathione-CoA-glutathione transhydrogenase activity","secondary_identifiers":["RHEA:13125"],"synonyms":[{"name":"CoA:glutathione-disulfide oxidoreductase activity","type":"related"},{"name":"coenzyme A:glutathione-disulfide oxidoreductase activity","type":"related"},{"name":"coenzyme A:oxidized-glutathione oxidoreductase activity","type":"related"},{"name":"glutathione coenzyme A-glutathione transhydrogenase activity","type":"related"},{"name":"glutathione-coenzyme A glutathione disulfide transhydrogenase activity","type":"related"},{"name":"glutathione:coenzyme A-glutathione transhydrogenase activity","type":"related"}],"termid":"GO:0047140"}


id: GO:1903923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein processing in phagocytic vesicle.","definition_xrefs":["PMID:23325791","GO_REF:0000058","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein processing","termid":"GO:0010954"},{"relation_name":"is_a","term_name":"regulation of protein processing in phagocytic vesicle","termid":"GO:1903921"},{"relation_name":"positively_regulates","term_name":"protein processing in phagocytic vesicle","termid":"GO:1900756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of protein processing in phagocytic vesicle","synonyms":[{"name":"activation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"activation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"activation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"narrow"},{"name":"activation of protein maturation by peptide bond cleavage in phagosome","type":"narrow"},{"name":"activation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"narrow"},{"name":"activation of protein maturation by peptide bond hydrolysis in phagosome","type":"narrow"},{"name":"activation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"activation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"activation of protein processing in phagocytic vesicle","type":"narrow"},{"name":"activation of protein processing in phagosome","type":"narrow"},{"name":"positive regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"positive regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"positive regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"positive regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"positive regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"positive regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"positive regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"positive regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"positive regulation of protein processing in phagosome","type":"exact"},{"name":"up regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"up regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"up regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"up regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"up regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"up regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"up regulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein processing in phagosome","type":"exact"},{"name":"up-regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"up-regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"up-regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"up-regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"up-regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"up-regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"up-regulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein processing in phagosome","type":"exact"},{"name":"upregulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"upregulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"upregulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"upregulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"upregulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"upregulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"upregulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein processing in phagosome","type":"exact"}],"termid":"GO:1903923"}


id: MONDO:0020381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A macular degeneration characterized by abnormal accumulation of lipofuscin in the retinal pigment epithelium in a distinct pattern, patterns include; reticular ('fishnet-like'), macroreticular ('spider-shaped'), and butterfly-shaped.","definition_xrefs":["DOID:0060863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"},{"relation_name":"is_a","term_name":"patterned dystrophy of the retinal pigment epithelium","termid":"MONDO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"patterned macular dystrophy","secondary_identifiers":["SCTID:725590001","OMIMPS:169150","ICD10CM:H35.5"],"synonyms":[{"name":"macular dystrophy, patterned","type":"exact"},{"name":"patterned dystrophy of retinal pigment epithelium","type":"exact"}],"termid":"MONDO:0020381","xrefs":{"Monarch":{"xref_id":"0020381"}}}


id: PATO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000347 sporophyte incompatible value (obsolete PATO:0000347)","termid":"PATO:0000347"}


id: PBO:0015656
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 2.1x10^4 min-1 M-1","termid":"PBO:0015656"}


id: PBO:0017418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transformation_of","termid":"PBO:0017418"}


id: MOD:00076
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to symmetric dimethylarginine, N(omega),N'(omega)-dimethyl-L-arginine.","definition_xrefs":["PubMed:14570711","PubMed:15835918","PubMed:2426402","PubMed:5128665","RESID:AA0067","Unimod:36#R","PubMed:12964758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"dimethylated L-arginine","termid":"MOD:00783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"symmetric dimethyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-[((methylamino)(methylimino)methyl)amino]pentanoic acid","type":"exact"},{"name":"Dimethyl","type":"related"},{"name":"MOD_RES Omega-N-methylated arginine","type":"exact"},{"name":"MOD_RES Symmetric dimethylarginine","type":"exact"},{"name":"N3,N4-dimethylarginine","type":"exact"},{"name":"N5-[(methylamino)(methylimino)methyl]ornithine","type":"exact"},{"name":"NG,N'G-dimethylarginine","type":"exact"},{"name":"NoNo'Me2Arg","type":"exact"},{"name":"di-Methylation","type":"related"},{"name":"omega-N,omega-N'-dimethyl-L-arginine","type":"exact"},{"name":"omega-N,omega-N'-dimethylated L-arginine","type":"exact"},{"name":"symmetric dimethylarginine","type":"exact"}],"termid":"MOD:00076"}


id: PR:Q1K9C2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sir1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1K9C2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase [NADPH] subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.01c","synonyms":[{"name":"Spom972h-sir1","type":"exact"}],"termid":"PR:Q1K9C2"}


id: GO:1902333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA ligation that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear DNA replication DNA ligation (obsolete GO:1902333)","synonyms":[{"name":"DNA ligation involved in DNA replication during S phase","type":"related"},{"name":"DNA ligation involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA ligation involved in DNA replication involved in S-phase","type":"exact"},{"name":"DNA ligation involved in nuclear cell cycle DNA replication","type":"exact"}],"termid":"GO:1902333"}


id: PBO:0050371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 74","termid":"PBO:0050371"}


id: GO:1905573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GM1.","definition_xrefs":["GOC:TermGenie","PMID:1454804","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ganglioside GM1 binding","termid":"GO:1905573"}


id: FYPO:0006001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to P-bodies does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to P-bodies","synonyms":[{"name":"abolished protein localisation to P-bodies","type":"exact"},{"name":"abolished protein localization to P-bodies during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to P-bodies during vegetative growth","type":"exact"},{"name":"abolished protein localization to P-body","type":"exact"},{"name":"abolished protein localization to cytoplasmic P-bodies","type":"exact"},{"name":"protein localization to P-bodies abolished","type":"exact"}],"termid":"FYPO:0006001"}


id: GO:0044515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of glucagon-like peptide receptor 1 activity in of the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of glucagon-like peptide receptor 1 activity in another organism (obsolete GO:0044515)","synonyms":[{"name":"envenomation resulting in positive regulation of glucagon-like peptide receptor 1 activity in other organism","type":"exact"}],"termid":"GO:0044515"}


id: MONDO:0008166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovalocytosis, hereditary hemolytic, with defective erythropoiesis","secondary_identifiers":["MEDGEN:322255","MESH:C563479","UMLS:C1833689","OMIM:166910"],"synonyms":[{"name":"ovalocytosis, hereditary hemolytic, with defective erythropoiesis","type":"exact"}],"termid":"MONDO:0008166","xrefs":{"Monarch":{"xref_id":"0008166"}}}


id: MONDO:0010950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellituss that has material basis in mutation of the locus at chromosome 6q25-q27.","definition_xrefs":["DOID:0110747","PMID:7573053","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 8","secondary_identifiers":["MEDGEN:331462","UMLS:C1833218","MESH:C563433","OMIM:600883"],"synonyms":[{"name":"IDDM8","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 8","type":"related"},{"name":"insulin-dependent diabetes mellitus 8","type":"exact"}],"termid":"MONDO:0010950","xrefs":{"Monarch":{"xref_id":"0010950"}}}


id: GO:0033588
data:
  {"annotated_genes":["SJAG_04175","SJAG_04452","SJAG_00579","SJAG_03677","SJAG_04756","SJAG_04704"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58900,66307,73945,74082,79936,81565],"is_not":false,"summary":null,"term":"GO:0033588"}]},"cv_name":"cellular_component","definition":"A heterohexameric protein complex composed two discrete heterotrimeric subcomplexes that is involved in modification of wobble nucleosides in tRNA.","definition_xrefs":["GOC:bhm","GOC:jh","PMID:18755837","GOC:vw","PMID:15769872","PMID:11689709","GOC:mah","PMID:23165209","PMID:11435442","PMID:17018299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_03677":null,"SJAG_04175":null,"SJAG_04452":null,"SJAG_04704":null,"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"elongator holoenzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0033589"],"synonyms":[{"name":"Elongator core complex","type":"related"}],"termid":"GO:0033588","terms_by_termid":{"GO:0033588":null}}


id: GO:0046878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of saliva.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of saliva secretion","termid":"GO:0046877"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"positively_regulates","term_name":"saliva secretion","termid":"GO:0046541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of saliva secretion","synonyms":[{"name":"activation of saliva secretion","type":"narrow"},{"name":"stimulation of saliva secretion","type":"narrow"},{"name":"up regulation of saliva secretion","type":"exact"},{"name":"up-regulation of saliva secretion","type":"exact"},{"name":"upregulation of saliva secretion","type":"exact"}],"termid":"GO:0046878"}


id: MONDO:0018726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency due to a complement cascade component deficiency (obsolete MONDO:0018726)","termid":"MONDO:0018726","xrefs":{"Monarch":{"xref_id":"0018726"}}}


id: PBO:0045746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous Bornavirus like nucleoprotein 3, pseudogene","termid":"PBO:0045746"}


id: PBO:0072422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 27","termid":"PBO:0072422"}


id: PATO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000144 solid substance (obsolete PATO:0000144)","termid":"PATO:0000144"}


id: PBO:0064600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox 2","termid":"PBO:0064600"}


id: MONDO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete duodenum adenoma (obsolete MONDO:0000542)","termid":"MONDO:0000542","xrefs":{"Monarch":{"xref_id":"0000542"}}}


id: PBO:0017080
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements human SLC35A2","termid":"PBO:0017080"}


id: PBO:0034265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_biological_homology_relationship_with","termid":"PBO:0034265"}


id: MONDO:0010937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoproterenol-mediated vasodilatation","secondary_identifiers":["MEDGEN:331475","OMIM:600801","UMLS:C1833276"],"synonyms":[{"name":"isoproterenol-mediated vasodilatation","type":"exact"}],"termid":"MONDO:0010937","xrefs":{"Monarch":{"xref_id":"0010937"}}}


id: GO:1903801
data:
  {"annotated_genes":["SJAG_03591","SJAG_03970","SJAG_00991","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89900],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[100755,93582,95172],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"The directed movement of L-leucine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","GO_REF:0000075","PMID:23895341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-leucine transport","termid":"GO:0015820"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-leucine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0060356"],"synonyms":[{"name":"L-leucine import","type":"broad"},{"name":"L-leucine import into cell","type":"exact"},{"name":"L-leucine uptake","type":"narrow"},{"name":"leucine import","type":"broad"},{"name":"leucine uptake","type":"exact"}],"termid":"GO:1903801","terms_by_termid":{"GO:1905533":null,"GO:1905534":null}}


id: PBO:0017936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase Pmt1","termid":"PBO:0017936"}


id: PBO:0030802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030802"}


id: PBO:0073792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 12","termid":"PBO:0073792"}


id: FYPO:0006162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal protein localization to chromatin","termid":"FYPO:0006163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin during meiosis I","synonyms":[{"name":"normal protein localisation to chromatin during meiosis I","type":"exact"},{"name":"normal protein localization to chromatin during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006162"}


id: PBO:0046467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ES cell expressed Ras","termid":"PBO:0046467"}


id: PBO:0030931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyruvate_dehydrogenase_activity","termid":"PBO:0030931"}


id: PBO:0068249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N1","termid":"PBO:0068249"}


id: PBO:0031711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitophagy","termid":"PBO:0031711"}


id: PBO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH18 antisense RNA 1","termid":"PBO:0042499"}


id: GO:0008573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. ATP hydrolysis to import and assemble peroxisome components into the organelle.","definition_xrefs":["EC:3.6.4.7"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome-assembly ATPase activity (obsolete GO:0008573)","synonyms":[{"name":"peroxisome-assembly ATPase activity","type":"exact"}],"termid":"GO:0008573"}


id: PBO:0070374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 1","termid":"PBO:0070374"}


id: PBO:0065126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKD3 divergent transcript","termid":"PBO:0065126"}


id: GO:1901528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any hydrogen peroxide mediated signaling pathway that is involved in stomatal movement.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen peroxide mediated signaling pathway involved in stomatal movement (obsolete GO:1901528)","synonyms":[{"name":"H2O2 mediated signaling pathway involved in stomatal movement","type":"exact"},{"name":"hydrogen peroxide mediated signalling pathway involved in stomatal movement","type":"exact"}],"termid":"GO:1901528"}


id: MONDO:0008608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Down syndrome is a chromosomal abnormality caused by the presence of a third (partial or total) copy of the chromosome 21 genetic material and that is characterized by variable intellectual disability, muscular hypotonia, and joint laxity, often associated with a characteristic facial dysmorphism and various anomalies such as cardiac, gastrointestinal, or endocrine defects.","definition_xrefs":["Orphanet:870"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare syndrome with cardiac malformations (obsolete MONDO:0015506)","termid":"MONDO:0015506"},{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with epilepsy as a major feature (obsolete MONDO:0015652)","termid":"MONDO:0015652"},{"relation_name":"excluded_subClassOf","term_name":"obsolete Moyamoya syndrome (obsolete MONDO:0018792)","termid":"MONDO:0018792"},{"relation_name":"excluded_subClassOf","term_name":"chromosomal disorder","termid":"MONDO:0019040"},{"relation_name":"is_a","term_name":"chromosome 21 disorder","termid":"MONDO:0700124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Down syndrome","secondary_identifiers":["NANDO:2200965","NIFSTD:nlx_dys_20090502","icd11.foundation:1624623908","OMIM:190685","EFO:0001064","SCTID:41040004","UMLS:C0013080","DOID:14250","MedDRA:10044688","NCIT:C2993","ICD9:758.0","MESH:D004314","MEDGEN:4385"],"synonyms":[{"name":"Down syndrome","type":"exact"},{"name":"Down syndrome chromosome region","type":"related"},{"name":"Down syndrome critical region","type":"related"},{"name":"Down syndrome, Isolated cases","type":"exact"},{"name":"Down's syndrome","type":"exact"},{"name":"Down's syndrome - trisomy 21","type":"exact"},{"name":"Downs syndrome","type":"exact"},{"name":"G trisomy","type":"exact"},{"name":"complete trisomy 21 syndrome","type":"narrow"},{"name":"leukemia, megakaryoblastic, of Down syndrome","type":"related"},{"name":"leukemia, megakaryoblastic, with or without Down syndrome, somatic","type":"exact"},{"name":"transient myeloproliferative disorder of Down syndrome","type":"related"},{"name":"trisomy 21","type":"narrow"},{"name":"trisomy 21 (Down syndrome)","type":"exact"},{"name":"trisomy 21 syndrome","type":"narrow"}],"termid":"MONDO:0008608","xrefs":{"Monarch":{"xref_id":"0008608"}}}


id: MONDO:0015175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune pancreatitis (AIP) is a rare pancreatic disease characterized by chronic non-alcoholic pancreatitis that presents with abdominal pain, steatorrhea, obstructive jaundice and responds well to steroid therapy and is seen in two subforms: type 1 AIP which affects elderly males, involves other organs and has increased immunoglobin G4 (IgG4) levels and type 2 AIP which affects both sexes equally but presents at a younger age and has no other organ involvement or increased IgG4 levels.","definition_xrefs":["Orphanet:103919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"autoimmune disorder of gastrointestinal tract","termid":"MONDO:0000588"},{"relation_name":"is_a","term_name":"pancreatitis","termid":"MONDO:0004982"},{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune pancreatitis","secondary_identifiers":["DOID:0040091","SCTID:448542008","MedDRA:10069002","icd11.foundation:2057951941","MEDGEN:750633","GARD:10911","NANDO:1200925","NANDO:2200943","UMLS:C2609129","MESH:D000081012"],"synonyms":[{"name":"AIP","type":"exact"},{"name":"lymphoplasmocytic sclerosing pancreatitis","type":"related"}],"termid":"MONDO:0015175","xrefs":{"Monarch":{"xref_id":"0015175"}}}


id: PBO:0062434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 97 pseudogene","termid":"PBO:0062434"}


id: PBO:0012256
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TRK1 and TRK2","termid":"PBO:0012256"}


id: PBO:0058960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 3","termid":"PBO:0058960"}


id: MONDO:0009903
data:
  {"annotated_genes":["SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87219],"is_not":false,"summary":null,"term":"MONDO:0009903"}]},"cv_name":"mondo","definition":"Postaxial acrofacial dysostosis (POADS) is a type of acrofacial dysostosis characterized by mandibular and malar hypoplasia, small and cup-shaped ears, lower lid ectropion, and symmetrical postaxial limb deficiencies with absence of the fifth digital ray and ulnar hypoplasia.","definition_xrefs":["Orphanet:246"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"postaxial acrofacial dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8410","SCTID:66038001","MEDGEN:120522","icd11.foundation:70602060","OMIM:263750","ICD9:759.89","UMLS:C0265257","DOID:0111259","MESH:C537680"],"synonyms":[{"name":"GWAFD","type":"related"},{"name":"Genee-Wiedemann acrofacial dysostosis","type":"related"},{"name":"Genee-Wiedemann syndrome","type":"related"},{"name":"Mandibulfacial dysostosis with postaxial limb anomalies","type":"exact"},{"name":"Miller Syndrome","type":"exact"},{"name":"Miller syndrome","type":"exact"},{"name":"POADS","type":"exact"},{"name":"POADS syndrome","type":"related"},{"name":"Wildervanck-Smith syndrome","type":"related"},{"name":"acrofacial dysostosis, Genee-Wiedmann type","type":"exact"},{"name":"postaxial acrodysostosis","type":"exact"},{"name":"postaxial acrofacial dysostosis","type":"exact"},{"name":"postaxial acrofacial dysostosis (POADS) syndrome","type":"related"}],"termid":"MONDO:0009903","terms_by_termid":{"MONDO:0009903":null},"xrefs":{"Monarch":{"xref_id":"0009903"}}}


id: MONDO:0004338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal cancer","termid":"MONDO:0003072"},{"relation_name":"is_a","term_name":"retinal cell neoplasm","termid":"MONDO:0024341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"retinal cell cancer","secondary_identifiers":["NCIT:C7061","DOID:771"],"synonyms":[{"name":"cancer of retinal cell","type":"exact"},{"name":"malignant neoplasm of retinal cell","type":"exact"},{"name":"malignant retinal cell neoplasm","type":"exact"},{"name":"retinal cell cancer","type":"exact"}],"termid":"MONDO:0004338","xrefs":{"Monarch":{"xref_id":"0004338"}}}


id: MONDO:0010630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imprinting gene related to retinoblastoma","secondary_identifiers":["OMIM:308290","MEDGEN:333451","UMLS:C1839964"],"synonyms":[{"name":"imprinting gene related to retinoblastoma","type":"exact"}],"termid":"MONDO:0010630","xrefs":{"Monarch":{"xref_id":"0010630"}}}


id: GO:0002910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of peripheral B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peripheral tolerance induction","termid":"GO:0002660"},{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"positive regulation of B cell deletion","termid":"GO:0002869"},{"relation_name":"is_a","term_name":"regulation of peripheral B cell deletion","termid":"GO:0002908"},{"relation_name":"positively_regulates","term_name":"peripheral B cell deletion","termid":"GO:0002454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peripheral B cell deletion","synonyms":[{"name":"activation of peripheral B cell deletion","type":"narrow"},{"name":"stimulation of peripheral B cell deletion","type":"narrow"},{"name":"up regulation of peripheral B cell deletion","type":"exact"},{"name":"up-regulation of peripheral B cell deletion","type":"exact"},{"name":"upregulation of peripheral B cell deletion","type":"exact"}],"termid":"GO:0002910"}


id: PBO:0051428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-7 (pseudogene)","termid":"PBO:0051428"}


id: PBO:0089973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex subunit Leo1","termid":"PBO:0089973"}


id: PBO:0087673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Lst4p-Lst7p GTPase activating protein complex for Gtr2p; stimulates the GTPase activity of Rag family GTPase Gtr2p, within the context of the Gtr1p-Gtr2p heterodimer, after amino acid stimulation; required for activation of TORC1 in response to amino acid stimulation; recruited to the vacuolar membrane during amino acid starvation and released from the membrane by TORC1; required for the transport of amino acid permease Gap1p from the Golgi to the cell surface","termid":"PBO:0087673"}


id: PBO:0030243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_water_deprivation","termid":"PBO:0030243"}


id: PBO:0034094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_levels_of","termid":"PBO:0034094"}


id: FYPO:0004174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation does not occur in cells of the h+ mating type.","definition_xrefs":["PomBase:mah","PMID:9003326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"FYPO:0000280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0001985"],"is_obsolete":false,"name":"h+ specific sterility","synonyms":[{"name":"h+-specific sterility","type":"exact"},{"name":"h-plus-specific mating defect","type":"related"},{"name":"h-plus-specific sterility","type":"exact"}],"termid":"FYPO:0004174"}


id: PBO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as gnr1 in error","termid":"PBO:0001089"}


id: GO:1903726
data:
  {"annotated_genes":["SJAG_01906","SJAG_00053","SJAG_02380","SJAG_01187","SJAG_03940","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59688,92236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[117464,113334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[111682,114716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid metabolic process.","definition_xrefs":["GO_REF:0000058","PMID:10657240","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"negatively_regulates","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01187":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_03170":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phospholipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"down regulation of phospholipid metabolic process","type":"exact"},{"name":"down regulation of phospholipid metabolism","type":"exact"},{"name":"down-regulation of phospholipid metabolic process","type":"exact"},{"name":"down-regulation of phospholipid metabolism","type":"exact"},{"name":"downregulation of phospholipid metabolic process","type":"exact"},{"name":"downregulation of phospholipid metabolism","type":"exact"},{"name":"inhibition of phospholipid metabolic process","type":"narrow"},{"name":"inhibition of phospholipid metabolism","type":"narrow"},{"name":"negative regulation of phospholipid metabolism","type":"exact"}],"termid":"GO:1903726","terms_by_termid":{"GO:0071072":null,"GO:1902647":null,"GO:2001211":null}}


id: GO:0005703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A swelling at a site along the length of a polytene chromosome, thought to be the site of active transcription.","definition_xrefs":["GOC:bf","ISBN:0120649012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"polytene chromosome puff","termid":"GO:0005703"}


id: PBO:0117389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like domain 7, lysophospholipase","termid":"PBO:0117389"}


id: RO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"negatively_regulated_by","termid":"RO:0002335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_negative_regulatory_component_activity","termid":"RO:0002014"}


id: PBO:0079348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tweety family member 1","termid":"PBO:0079348"}


id: MONDO:0003724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breast fibrocystic change characterized by the absence of epithelial cell hyperplasia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast fibrocystic disease","termid":"MONDO:0005219"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-proliferative fibrocystic change of the breast","secondary_identifiers":["DOID:5997","UMLS:C1332628","MEDGEN:231966","NCIT:C6943"],"synonyms":[{"name":"breast fibrocystic change, non-proliferative type","type":"exact"},{"name":"non-proliferative fibrocystic change","type":"exact"},{"name":"non-proliferative fibrocystic change of breast","type":"exact"}],"termid":"MONDO:0003724","xrefs":{"Monarch":{"xref_id":"0003724"}}}


id: GO:0097382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a deoxynucleoside diphosphate + H2O = a deoxynucleotide + phosphate.","definition_xrefs":["GOC:pde"],"gene_count":0,"genotype_count":0,"name":"obsolete deoxynucleoside-diphosphatase activity (obsolete GO:0097382)","termid":"GO:0097382"}


id: MONDO:0008253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet aggregation, spontaneous","secondary_identifiers":["MEDGEN:401406","MESH:C566800","UMLS:C1868263","OMIM:173400"],"synonyms":[{"name":"platelet aggregation, spontaneous","type":"exact"}],"termid":"MONDO:0008253","xrefs":{"Monarch":{"xref_id":"0008253"}}}


id: MONDO:0021107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sleep disorder characterized by a tendency for excessive sleepiness during the day which occurs even after adequate sleep in the nighttime. The persons who suffer from this condition experience fatigue and may fall asleep at inappropriate times during the day.","definition_xrefs":["NCIT:C84489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy","secondary_identifiers":["DOID:8986","MESH:D009290","GARD:22460","icd11.foundation:1201727099","MEDGEN:45001","SCTID:60380001","UMLS:C0027404","Orphanet:619284"],"synonyms":[{"name":"narcolepsy with or without cataplexy","type":"exact"},{"name":"narcolepsy, without cataplexy","type":"narrow"},{"name":"paroxysmal sleep","type":"exact"}],"termid":"MONDO:0021107","xrefs":{"Monarch":{"xref_id":"0021107"}}}


id: PBO:0073761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 14","termid":"PBO:0073761"}


id: SO:1000144
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby the duplicated sequences are carried as a free centric element.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_duplication","termid":"SO:1000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_duplication","synonyms":[{"name":"free duplication","type":"exact"}],"termid":"SO:1000144"}


id: GO:0097279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Histamine release triggered by the binding of an antigen to an IgE immunoglobulin bound to the cell surface. An example is mast cell histamine degranulation as a result of exposure of mast cell-bound IgE to alder tree pollen.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion mediated by immunoglobulin","termid":"GO:0097280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"histamine secretion mediated by IgE immunoglobulin","synonyms":[{"name":"Ig-mediated histamine release","type":"broad"},{"name":"histamine secretion mediated by IgE antibody","type":"exact"}],"termid":"GO:0097279"}


id: FYPO:0003296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ribosome binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000702"],"is_obsolete":false,"name":"normal ribosome binding","termid":"FYPO:0003296"}


id: MONDO:0012397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, coloboma, and anterior segment dysgenesis","secondary_identifiers":["MESH:C566484","OMIM:610023","MEDGEN:355321","UMLS:C1864901"],"synonyms":[{"name":"brachydactyly, coloboma, and anterior segment dysgenesis","type":"exact"}],"termid":"MONDO:0012397","xrefs":{"Monarch":{"xref_id":"0012397"}}}


id: GO:0098811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II activating transcription factor and also with the RNA polymerase II basal transcription machinery in order to stop, prevent, or reduce the frequency, rate or extent of transcription.","definition_xrefs":["GOC:dos","GOC:BHF","GOC:rl","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional repressor activity, RNA polymerase II activating transcription factor binding (obsolete GO:0098811)","synonyms":[{"name":"RNA polymerase II activating transcription factor binding transcription factor activity involved in negative regulation of transcription","type":"exact"},{"name":"RNA polymerase II activating transcription factor binding transcription repressor activity","type":"exact"},{"name":"RNA polymerase II transcription repressor activity","type":"broad"}],"termid":"GO:0098811"}


id: GO:0085016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Exit from dormant state, also known as resuscitation, of the symbiont within the host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dormancy exit of symbiont in host","synonyms":[{"name":"resuscitation of symbiont","type":"exact"}],"termid":"GO:0085016"}


id: PBO:0108903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD39 pseudogene 1","termid":"PBO:0108903"}


id: PBO:0054613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2018","termid":"PBO:0054613"}


id: MONDO:0100453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by biallelic variants in the GUCY2D gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"GUCY2D retinopathy","termid":"MONDO:0100454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"GUCY2D-related recessive retinopathy","synonyms":[{"name":"CORD6","type":"narrow"},{"name":"CRB","type":"narrow"},{"name":"GUCY2D Leber congenital amaurosis","type":"narrow"},{"name":"GUCY2D cone-rod dystrophy","type":"narrow"},{"name":"LCA","type":"narrow"},{"name":"LCA1","type":"narrow"},{"name":"Leber congenital amaurosis 1","type":"narrow"},{"name":"Leber congenital amaurosis caused by mutation in GUCY2D","type":"narrow"},{"name":"Leber congenital amaurosis type 1","type":"narrow"},{"name":"RCD2","type":"narrow"},{"name":"amaurosis congenita of Leber 1","type":"narrow"},{"name":"amaurosis congenita of Leber I","type":"narrow"},{"name":"amaurosis congenita of Leber, type 1","type":"narrow"},{"name":"cone-rod dystrophy 6","type":"narrow"},{"name":"cone-rod dystrophy caused by mutation in GUCY2D","type":"narrow"},{"name":"cone-rod dystrophy type 6","type":"narrow"},{"name":"night blindness, congenital stationary, type 1I","type":"narrow"},{"name":"recessive GUCY2D retinopathy","type":"exact"},{"name":"retinal blindness, congenital","type":"narrow"},{"name":"retinal cone dystrophy 2","type":"narrow"}],"termid":"MONDO:0100453","xrefs":{"Monarch":{"xref_id":"0100453"}}}


id: MONDO:0012015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus 3, congenital, autosomal dominant","secondary_identifiers":["MEDGEN:374873","OMIM:608345","UMLS:C1842186","DOID:0111793","MESH:C537855"],"synonyms":[{"name":"NYS3","type":"exact"},{"name":"NYSTAGMUS 3, congenital, autosomal dominant","type":"related"}],"termid":"MONDO:0012015","xrefs":{"Monarch":{"xref_id":"0012015"}}}


id: PBO:0087343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spermine synthase; required for the biosynthesis of spermine and also involved in biosynthesis of pantothenic acid","termid":"PBO:0087343"}


id: PBO:0057072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 152","termid":"PBO:0057072"}


id: PBO:0001612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U6","termid":"PBO:0001612"}


id: PBO:0048669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase alpha","termid":"PBO:0048669"}


id: GO:0032199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of DNA from an RNA transposon intermediate.","definition_xrefs":["GOC:jp","GOC:txnOH","ISBN:1555812090"],"gene_count":0,"genotype_count":0,"name":"obsolete reverse transcription involved in RNA-mediated transposition (obsolete GO:0032199)","synonyms":[{"name":"reverse transcription during retrotransposition","type":"exact"}],"termid":"GO:0032199"}


id: PBO:0072209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 8","termid":"PBO:0072209"}


id: PBO:0073684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 6","termid":"PBO:0073684"}


id: GO:0044483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts hemostasis in another organism via the action of a venom. Hemostasis is the mechanism that leads to cessation of bleeding from a blood vessel.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of blood circulation","termid":"GO:0140134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of hemostasis","synonyms":[{"name":"envenomation perturbing hemostasis","type":"exact"},{"name":"envenomation resulting in impairment of hemostasis in another organism","type":"exact"},{"name":"envenomation resulting in impairment of hemostasis in other organism","type":"exact"},{"name":"envenomation resulting in negative regulation of hemostasis in other organism","type":"exact"},{"name":"envenomation, impairing hemostasis in other organism","type":"exact"}],"termid":"GO:0044483"}


id: PBO:0085848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; protein abundance increases in response to DNA replication stress","termid":"PBO:0085848"}


id: GO:0110103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A conserved protein complex capable of 5'-3' exoribonuclease activity. It is able to promote RNA polymerase II (RNAPII) transcription termination by degrading pre-mRNA from the newly formed 5' phosphorylated end.","definition_xrefs":["PMID:25722373","GOC:lnp","PMID:23200120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase II termination complex","synonyms":[{"name":"TXT complex","type":"exact"}],"termid":"GO:0110103"}


id: PBO:0050491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B1","termid":"PBO:0050491"}


id: PBO:0056759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 14, N6-adenosine-methyltransferase subunit","termid":"PBO:0056759"}


id: SO:0001015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of non-canonical base pairing, most commonly between G and U, which is important for the secondary structure of RNAs. It has similar thermodynamic stability to the Watson-Crick pairing. Wobble base pairs only have two hydrogen bonds. Other wobble base pair possibilities are I-A, I-U and I-C.","definition_xrefs":["PMID:11256617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wobble_base_pair","secondary_identifiers":["http://en.wikipedia.org/wiki/Wobble_base_pair"],"synonyms":[{"name":"wobble base pair","type":"exact"},{"name":"wobble pair","type":"exact"}],"termid":"SO:0001015"}


id: FYPO:0007538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to paromomycin. Cells stop growing (and may die) at a concentration of paromomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to paromomycin","synonyms":[{"name":"hypersensitive to paromomycin","type":"exact"},{"name":"sensitive to paromomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to paromomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0007538"}


id: GO:0006314
data:
  {"annotated_genes":["SJAG_MIT06","SJAG_MIT05","SJAG_MIT07"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[121048,121056,121057],"is_not":false,"summary":null,"term":"GO:0006314"}]},"cv_name":"biological_process","definition":"Lateral transfer of an intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron.","definition_xrefs":["PMID:10487208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"intron homing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006314","terms_by_termid":{"GO:0006314":null}}


id: GO:0075063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of symbiont invasive hypha formation within host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invasive hypha growth (obsolete GO:0075063)","synonyms":[{"name":"positive regulation of symbiont invasive hypha formation in host","type":"exact"},{"name":"positive regulation of symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0075063"}


id: PBO:0031699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_fusion_during_mating","termid":"PBO:0031699"}


id: MONDO:1011938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis and palatoschisis syndrome, non-human animal","secondary_identifiers":["OMIA:000070"],"termid":"MONDO:1011938","xrefs":{"Monarch":{"xref_id":"1011938"}}}


id: PBO:0078373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalase","termid":"PBO:0078373"}


id: PBO:0091941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acid amide hydrolase","termid":"PBO:0091941"}


id: MONDO:1012173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysphagia-associated muscular dystrophy, non-human animal","termid":"MONDO:1011790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysphagia-associated muscular dystrophy, dog","secondary_identifiers":["OMIA:000681-9615"],"termid":"MONDO:1012173","xrefs":{"Monarch":{"xref_id":"1012173"}}}


id: PBO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-independent regulatory protein Pac2","termid":"PBO:0001835"}


id: PR:O74896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mhf2 gene.","definition_xrefs":["UniProtKB:O74896","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHF histone-fold complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.12c","synonyms":[{"name":"MHF histone-fold complex subunit 1 (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"SPCC576.12c","type":"related"},{"name":"Spom972h-mhf2","type":"exact"}],"termid":"PR:O74896"}


id: PBO:0084608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YBL103C-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBL104C","termid":"PBO:0084608"}


id: PATO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality inhering in a process by virtue of the bearer's being essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity of occurrent","termid":"PATO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessary (occurrent)","termid":"PATO:0001638"}


id: MONDO:0019873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"4p16.3 microduplication syndrome is a rare genetic syndrome that results from the partial duplication of the short arm of chromosome 4. It has a highly variable phenotype, principally characterized by psychomotor and language delay, seizures and dysmorphic features such as high forehead with frontal bossing, hypertelorism, prominent glabella, long narrow palpebral fissures, low set ears and short neck. Eye abnormalities (glaucoma, irregular iris pigmentation, hyperopia) have also been reported.","definition_xrefs":["Orphanet:96072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 4","termid":"MONDO:0016941"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4p16.3 microduplication syndrome","secondary_identifiers":["UMLS:C4512053","MEDGEN:1387521","GARD:19306","SCTID:726706008"],"synonyms":[{"name":"distal duplication 4p","type":"exact"},{"name":"distal trisomy 4p","type":"exact"},{"name":"telomeric duplication 4p","type":"exact"},{"name":"trisomy 4pter","type":"exact"}],"termid":"MONDO:0019873","xrefs":{"Monarch":{"xref_id":"0019873"}}}


id: PBO:0001148
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile leukoencephalopathy","termid":"PBO:0001148"}


id: MONDO:0000874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A T lymphoblastic lymphoma that occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoblastic lymphoma","termid":"MONDO:0000873"},{"relation_name":"is_a","term_name":"pediatric lymphoma","termid":"MONDO:0003659"},{"relation_name":"is_a","term_name":"childhood precursor T-lymphoblastic lymphoma/leukemia","termid":"MONDO:0004403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"T-cell childhood lymphoblastic lymphoma","secondary_identifiers":["DOID:0080148","NCIT:C7210","MEDGEN:232068","UMLS:C1332998"],"synonyms":[{"name":"T lymphoblastic lymphoma","type":"exact"},{"name":"childhood T lymphoblastic lymphoma","type":"exact"},{"name":"childhood precursor T-lymphoblastic lymphoma","type":"exact"}],"termid":"MONDO:0000874","xrefs":{"Monarch":{"xref_id":"0000874"}}}


id: PBO:0042316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD34 molecule","termid":"PBO:0042316"}


id: MONDO:0006634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm of the anterior pituitary gland in which the neoplastic cells stain positive with acidic dyes.","definition_xrefs":["NCIT:C6780"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"pituitary gland adenoma","termid":"MONDO:0006373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary gland acidophil adenoma","secondary_identifiers":["MESH:D000239","ICDO:8280/0","UMLS:C0001433","MEDGEN:1748","EFO:1000791","DOID:5392"],"synonyms":[{"name":"acidophil adenoma","type":"exact"},{"name":"eosinophil adenoma","type":"exact"},{"name":"pituitary gland acidophil adenoma","type":"exact"}],"termid":"MONDO:0006634","xrefs":{"Monarch":{"xref_id":"0006634"}}}


id: GO:0021960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in one half of the cerebral cortex towards target cells in the contralateral half. This axonal process is a member of those that make up the anterior commissure, a small midline fiber tract that lies at the anterior end of the corpus callosum.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","ISBN:0878937420","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior commissure morphogenesis","termid":"GO:0021960"}


id: PBO:0064484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase lambda","termid":"PBO:0064484"}


id: GO:0032901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of a neurotrophin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotrophin production","termid":"GO:0032899"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"neurotrophin production","termid":"GO:0032898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurotrophin production","synonyms":[{"name":"activation of neurotrophin production","type":"narrow"},{"name":"stimulation of neurotrophin production","type":"narrow"},{"name":"up regulation of neurotrophin production","type":"exact"},{"name":"up-regulation of neurotrophin production","type":"exact"},{"name":"upregulation of neurotrophin production","type":"exact"}],"termid":"GO:0032901"}


id: MOD:00793
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82368],"is_not":false,"summary":null,"term":"MOD:00793"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to dehydroalanine.","definition_xrefs":["DeltaMass:8","PubMed:11212008","PubMed:2914619","RESID:AA0181#CYS","PubMed:1547888","PubMed:15799070","PubMed:8239649","PubMed:10220322","PubMed:1815586","PubMed:20805503","PubMed:7947813","Unimod:368","ChEBI:17123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"dehydroalanine (Cys)","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Cys->Dha","type":"related"},{"name":"Dehydroalanine (from Cysteine)","type":"exact"},{"name":"Dha","type":"exact"},{"name":"MOD_RES 2,3-didehydroalanine (Cys)","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dHAla(Cys)","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:00793","terms_by_termid":{"MOD:00793":null}}


id: GO:1904375
data:
  {"annotated_genes":["SJAG_03970","SJAG_02392","SJAG_03602","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[96256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[97716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[100304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell periphery.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03602":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904375","terms_by_termid":{"GO:0042997":null,"GO:0120047":null,"GO:0140325":null,"GO:1903077":null}}


id: GO:0000379
data:
  {"annotated_genes":["SJAG_04907","SJAG_00754","SJAG_01260","SJAG_03328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73205,74655,75699,80755],"is_not":false,"summary":null,"term":"GO:0000379"}]},"cv_name":"biological_process","definition":"RNA processing that begins when the tertiary structure of a tRNA type intron is recognized, and ends when the endonucleolytic cleavage of the RNA at both the 5' and 3' splice sites occurs.","definition_xrefs":["GOC:mah","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA-type intron splice site recognition and cleavage","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000379","terms_by_termid":{"GO:0000379":null}}


id: PR:Q10407
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mkh1 gene.","definition_xrefs":["UniProtKB:Q10407","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase mkh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.02c","synonyms":[{"name":"Spom972h-mkh1","type":"exact"}],"termid":"PR:Q10407"}


id: GO:0052927
data:
  {"annotated_genes":["SJAG_01704","SJAG_02288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72067,76588],"is_not":false,"summary":null,"term":"GO:0052927"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a tRNA precursor + CTP = a tRNA with a 3' CC end + 2 diphosphate.","definition_xrefs":["PMID:31936900","PMID:33095240","RHEA:60008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01704":null,"SJAG_02288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674","GO:0016779","GO:0016740","GO:0140101"],"is_obsolete":false,"name":"CC tRNA cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0052928"],"synonyms":[{"name":"CC-adding tRNA nucleotidyltransferase activity","type":"exact"},{"name":"CTP:3'-cytidine-tRNA cytidylyltransferase activity","type":"related"},{"name":"CTP:tRNA cytidylyltransferase activity","type":"exact"}],"termid":"GO:0052927","terms_by_termid":{"GO:0052927":null}}


id: MONDO:0022444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis with tracheobronchial deposits in diffuse plaques that can cause stenosis or parenchymal nodules or masses.","definition_xrefs":["PMID:22197156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"amyloidosis bronchopulmonary","secondary_identifiers":["GARD:1026"],"termid":"MONDO:0022444","xrefs":{"Monarch":{"xref_id":"0022444"}}}


id: PBO:0066949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 251","termid":"PBO:0066949"}


id: GO:0006520
data:
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id: MONDO:1011441
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id: PBO:0000643
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id: PBO:0044786
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id: PBO:0088367
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id: PBO:0003253
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id: FYPO:0003711
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id: GO:0072383
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id: PBO:0044841
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id: PATO:0001705
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id: PBO:0068113
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id: PBO:0038424
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id: PBO:0110237
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id: GO:0033693
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id: MONDO:0000932
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id: PBO:0061177
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id: GO:0015052
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id: GO:0097455
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id: PBO:0085182
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id: MONDO:0021439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the pituitary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign reproductive system neoplasm","termid":"MONDO:0000383"},{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"benign neoplasm of brain","termid":"MONDO:0021451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of pituitary gland","secondary_identifiers":["SCTID:92296004","UMLS:C0496901","icd11.foundation:1871539651","DOID:60009","ICD10CM:D35.2","MEDGEN:141679","NCIT:C4782"],"synonyms":[{"name":"benign neoplasm of pituitary","type":"exact"},{"name":"benign neoplasm of the pituitary","type":"exact"},{"name":"benign neoplasm of the pituitary gland","type":"exact"},{"name":"benign pituitary gland neoplasm","type":"exact"},{"name":"benign pituitary gland tumor","type":"exact"},{"name":"benign pituitary gland tumour","type":"exact"},{"name":"benign pituitary neoplasm","type":"exact"},{"name":"benign pituitary tumor","type":"exact"},{"name":"benign pituitary tumour","type":"exact"},{"name":"benign tumor of pituitary","type":"exact"},{"name":"benign tumor of pituitary gland","type":"exact"},{"name":"benign tumor of the pituitary","type":"exact"},{"name":"benign tumor of the pituitary gland","type":"exact"},{"name":"benign tumour of pituitary","type":"exact"},{"name":"benign tumour of pituitary gland","type":"exact"},{"name":"benign tumour of the pituitary","type":"exact"},{"name":"benign tumour of the pituitary gland","type":"exact"},{"name":"pituitary gland benign neoplasm","type":"exact"},{"name":"pituitary neoplasms, benign","type":"exact"},{"name":"pituitary tumor, benign","type":"exact"}],"termid":"MONDO:0021439","xrefs":{"Monarch":{"xref_id":"0021439"}}}


id: GO:0070947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a fungal cell by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"},{"relation_name":"part_of","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of fungus","synonyms":[{"name":"neutrophil mediated killing of fungus","type":"exact"}],"termid":"GO:0070947"}


id: PBO:0043400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMKLR2 antisense RNA","termid":"PBO:0043400"}


id: FYPO:0004398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phenylarsine oxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to phenylarsine oxide","synonyms":[{"name":"resistance to phenylarsine oxide during mitotic cell cycle","type":"related"},{"name":"resistance to phenylarsine oxide during vegetative growth","type":"exact"},{"name":"resistant to phenylarsine oxide","type":"exact"}],"termid":"FYPO:0004398"}


id: MOD:00860
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that produces an amino acid residue containing an exogenous sulfur atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur containing modified residue","termid":"MOD:00860"}


id: PBO:0069450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 715, pseudogene","termid":"PBO:0069450"}


id: PBO:0042079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 146","termid":"PBO:0042079"}


id: PBO:0076086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid sulfatase (microsomal) pseudogene 1","termid":"PBO:0076086"}


id: PBO:0076877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX28 pseudogene 1","termid":"PBO:0076877"}


id: PATO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001033 stiffness (obsolete PATO:0001033)","termid":"PATO:0001033"}


id: PBO:0084087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor for the GTPase Gtr1p; subunit of the HOPS endocytic tethering complex; vacuole membrane protein; functions as a Rab GTPase effector, interacting with both GTP- and GDP-bound conformations of Ypt7p; facilitates tethering and promotes membrane fusion events at the late endosome and vacuole; required for both membrane and protein trafficking; component of vacuole-mitochondrion contacts (vCLAMPs) important for lipid transfer between organelles","termid":"PBO:0084087"}


id: PBO:0052526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 41","termid":"PBO:0052526"}


id: GO:1903969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to macrophage colony-stimulating factor.","definition_xrefs":["GOC:nc","GOC:TermGenie","GO_REF:0000058","GOC:BHF","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"response to macrophage colony-stimulating factor","termid":"GO:0036005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to macrophage colony-stimulating factor","synonyms":[{"name":"regulation of response to M-CSF","type":"exact"},{"name":"regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:1903969"}


id: RO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innervated_by","termid":"RO:0002005"}


id: PR:O43015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2G2.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase C2G2.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.17c","synonyms":[{"name":"Spom972h-SPBC2G2.17c","type":"exact"}],"termid":"PR:O43015"}


id: PR:O59858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutathione peroxidase 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.03c","secondary_identifiers":["UniProtKB:O59858"],"synonyms":[{"name":"Spom972h-GPX8","type":"exact"}],"termid":"PR:O59858"}


id: MONDO:0019297
data:
  {"annotated_genes":["SJAG_04745","SJAG_02923","SJAG_02342","SJAG_00993","SJAG_03453","SJAG_02648","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[88142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[89072,89073,89071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"}]},"cv_name":"mondo","definition":"Excess fluid collection in tissues, causing swelling. It is the result of obstruction of lymphatic vessels or lymph nodes.","definition_xrefs":["NCIT:C3207"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic skin disease (obsolete MONDO:0019043)","termid":"MONDO:0019043"},{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphedema","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:6155","UMLS:C0024236","ICD9:457.1","MESH:D008209","SCTID:234097001","DOID:4977","MedDRA:10025282","Orphanet:79383"],"synonyms":[{"name":"lymphatic edema","type":"exact"},{"name":"lymphatic edema (morphologic abnormality)","type":"exact"},{"name":"lymphatic oedema","type":"exact"},{"name":"lymphatic oedema (morphologic abnormality)","type":"exact"},{"name":"lymphoedema","type":"exact"}],"termid":"MONDO:0019297","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0011257":null,"MONDO:0012371":null,"MONDO:0013186":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0019297"}}}


id: PBO:0059848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1","termid":"PBO:0059848"}


id: FYPO:0006420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which sites at which the protein Rad51 accumulates remain present for a normal (i.e. indistinguishable from wild type) amount of time during the meiotic cell cycle. Normally, Rad51 foci form during prophase I but disappear before metaphase I.","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of Rad51 focus presence during meiotic cell cycle","termid":"FYPO:0006420"}


id: MONDO:0957115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic ryanodine receptor defect","secondary_identifiers":["MEDGEN:1842742","GARD:19567","Orphanet:98742","UMLS:C5681684"],"termid":"MONDO:0957115","xrefs":{"Monarch":{"xref_id":"0957115"}}}


id: MONDO:1012799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any skeletal dysplasia that occurs in dogs due to FGF4 retrogene insertions (FGF4L1 and/or FGF4L2).","definition_xrefs":["OMIA:002133-9615","PMID:29073074","PMID:35205370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, FGF4-retrogene-related, dog","termid":"MONDO:1012799","xrefs":{"Monarch":{"xref_id":"1012799"}}}


id: PBO:0084081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP/GDP exchange factor for Rsr1p (Bud1p); required for both axial and bipolar budding patterns; mutants exhibit random budding in all cell types","termid":"PBO:0084081"}


id: PR:O43005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apl1 gene.","definition_xrefs":["UniProtKB:O43005","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 complex subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.06c","synonyms":[{"name":"Spom972h-apl1","type":"exact"},{"name":"beta-2-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein complex 2 beta large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large beta chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43005"}


id: PR:O59666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A copper-exporting P-type ATPase A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03101","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-transporting ATPase ccc2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.01","secondary_identifiers":["UniProtKB:O59666"],"synonyms":[{"name":"Cu(2+)-ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-copA","type":"exact"}],"termid":"PR:O59666"}


id: PBO:0004662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase epsilon subunit (predicted)","termid":"PBO:0004662"}


id: PBO:0045146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 3","termid":"PBO:0045146"}


id: PBO:0061926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily I member 1","termid":"PBO:0061926"}


id: PR:Q9UU99
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC23B6.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU99"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C23B6.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.04c","synonyms":[{"name":"Spom972h-SPCC23B6.04c","type":"exact"}],"termid":"PR:Q9UU99"}


id: GO:0050969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in magnetoception in which a chemical stimulus is received and converted into a molecular signal. It is believed that organisms such as birds and salamanders interpret product ratios in chemical reactions which involve transitions between different spin states.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception","termid":"GO:0050907"},{"relation_name":"part_of","term_name":"magnetoreception by sensory perception of chemical stimulus","termid":"GO:0050977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in magnetoreception","synonyms":[{"name":"magnetoception, sensory transduction of chemical stimulus","type":"exact"},{"name":"magnetoreception, detection of chemical stimulus","type":"exact"},{"name":"magnetoreception, sensory detection of chemical stimulus","type":"exact"},{"name":"magnetoreception, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during magnetoreception","type":"exact"},{"name":"sensory transduction of chemical stimulus during magnetoreception","type":"exact"}],"termid":"GO:0050969"}


id: PBO:0087454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex with Ctf8p and Ctf18p; shares some components with Replication Factor C; required for sister chromatid cohesion and telomere length maintenance","termid":"PBO:0087454"}


id: GO:0009601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from an insect is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of insect","synonyms":[{"name":"perception of insect","type":"related"}],"termid":"GO:0009601"}


id: PBO:0075628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow of prion protein pseudogene 1","termid":"PBO:0075628"}


id: FYPO:0001747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of nickel ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nickel import","synonyms":[{"name":"abnormal cellular nickel import","type":"exact"},{"name":"abnormal nickel cation import","type":"exact"},{"name":"abnormal nickel import across plasma membrane","type":"exact"},{"name":"abnormal nickel import during mitotic cell cycle","type":"related"},{"name":"abnormal nickel import during vegetative growth","type":"exact"},{"name":"abnormal nickel import into cell","type":"exact"},{"name":"abnormal nickel ion import","type":"exact"}],"termid":"FYPO:0001747"}


id: PBO:0074179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 2","termid":"PBO:0074179"}


id: PBO:0064970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 26","termid":"PBO:0064970"}


id: MOD:01955
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["PubMed:21499260","RESID:AA0600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese containing modified residue","termid":"MOD:00740"},{"relation_name":"is_a","term_name":"calcium containing modified residue","termid":"MOD:01482"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-alanine residue","termid":"MOD:02065"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alaninato bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese pentoxide","synonyms":[{"name":"4Mn-Ca-5O cluster","type":"exact"},{"name":"L-alaninato bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese pentoxide","type":"exact"},{"name":"mu2-alaninato-1kappaO(1),3kappaO(1')-mu2-aspartato-1kappaO(4),5kappaO(4')-mu2-aspartato-2kappaO(4),3kappaO(4')-mu2-glutamato-3kappaO(5),4kappaO(5')-mu2-glutamato-4kappaO(5),5kappaO(5')-mu-glutamato-2kappaO(5)-mu-histidino-2kappaN(tau)-mu4-oxido-1:2:4:5kappa(4)O-tri-mu3-oxido-1:2:3kappa(3)O;1:3:4kappa(3)O;2:3:4kappa(3)O;mu-oxido-4:5kappa(2)O-calciumtetramanganese","type":"exact"},{"name":"photosystem II catalytic cluster","type":"exact"}],"termid":"MOD:01955"}


id: GO:0032750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-26 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-26 production","termid":"GO:0032670"},{"relation_name":"positively_regulates","term_name":"interleukin-26 production","termid":"GO:0032630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-26 production","secondary_identifiers":["GO:0045538"],"synonyms":[{"name":"activation of interleukin-26 production","type":"narrow"},{"name":"positive regulation of IL-26 production","type":"exact"},{"name":"positive regulation of interleukin-26 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-26 production","type":"narrow"},{"name":"up regulation of interleukin-26 production","type":"exact"},{"name":"up-regulation of interleukin-26 production","type":"exact"},{"name":"upregulation of interleukin-26 production","type":"exact"}],"termid":"GO:0032750"}


id: PR:Q10287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bgs1 gene.","definition_xrefs":["UniProtKB:Q10287","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase component bgs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.05c","synonyms":[{"name":"1,3-beta-D-glucan-UDP glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bgs1","type":"exact"}],"termid":"PR:Q10287"}


id: FYPO:0005832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cortex of the cell tip is abnormal. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["GO:0099110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule during vegetative growth","termid":"FYPO:0005830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein transport along microtubule to cell tip cortex during vegetative growth","synonyms":[{"name":"abnormal protein movement along microtubule to cell tip cortex during vegetative growth","type":"exact"},{"name":"abnormal protein transport along microtubule to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"abnormal protein transport along microtubule to cell tip cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005832"}


id: PBO:0059325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 10","termid":"PBO:0059325"}


id: MONDO:0009327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart, malformation of","secondary_identifiers":["OMIM:140500","OMIM:234750"],"synonyms":[{"name":"heart, malformation of","type":"exact"}],"termid":"MONDO:0009327","xrefs":{"Monarch":{"xref_id":"0009327"}}}


id: GO:1901305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of polyamine biosynthetic process","termid":"GO:0170066"},{"relation_name":"is_a","term_name":"regulation of spermidine biosynthetic process","termid":"GO:1901304"},{"relation_name":"negatively_regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spermidine biosynthetic process","synonyms":[{"name":"down regulation of spermidine anabolism","type":"exact"},{"name":"down regulation of spermidine biosynthesis","type":"exact"},{"name":"down regulation of spermidine biosynthetic process","type":"exact"},{"name":"down regulation of spermidine formation","type":"exact"},{"name":"down regulation of spermidine synthesis","type":"exact"},{"name":"down-regulation of spermidine anabolism","type":"exact"},{"name":"down-regulation of spermidine biosynthesis","type":"exact"},{"name":"down-regulation of spermidine biosynthetic process","type":"exact"},{"name":"down-regulation of spermidine formation","type":"exact"},{"name":"down-regulation of spermidine synthesis","type":"exact"},{"name":"downregulation of spermidine anabolism","type":"exact"},{"name":"downregulation of spermidine biosynthesis","type":"exact"},{"name":"downregulation of spermidine biosynthetic process","type":"exact"},{"name":"downregulation of spermidine formation","type":"exact"},{"name":"downregulation of spermidine synthesis","type":"exact"},{"name":"inhibition of spermidine anabolism","type":"exact"},{"name":"inhibition of spermidine biosynthesis","type":"exact"},{"name":"inhibition of spermidine biosynthetic process","type":"narrow"},{"name":"inhibition of spermidine formation","type":"exact"},{"name":"inhibition of spermidine synthesis","type":"exact"},{"name":"negative regulation of spermidine anabolism","type":"exact"},{"name":"negative regulation of spermidine biosynthesis","type":"exact"},{"name":"negative regulation of spermidine formation","type":"exact"},{"name":"negative regulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901305"}


id: PBO:0054730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2139","termid":"PBO:0054730"}


id: MONDO:0003529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sudden onset pyelonephritis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyelonephritis","termid":"MONDO:0006939"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute pyelonephritis","secondary_identifiers":["ICD10CM:N10","DOID:559","ICD9:590.1","SCTID:36689008","MEDGEN:636072","NCIT:C123215","UMLS:C0520575","icd11.foundation:441183088"],"synonyms":[{"name":"pyelonephritis, acute","type":"exact"}],"termid":"MONDO:0003529","xrefs":{"Monarch":{"xref_id":"0003529"}}}


id: GO:0043369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature T cell commits to CD4-positive T cell lineage or the CD8-positive lineage of alpha-beta T cells.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell lineage commitment","termid":"GO:0002360"},{"relation_name":"part_of","term_name":"positive T cell selection","termid":"GO:0043368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive or CD8-positive, alpha-beta T cell lineage commitment","synonyms":[{"name":"CD4-positive or CD8-positive, alpha-beta T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive or CD8-positive, alpha-beta T-cell lineage commitment","type":"exact"},{"name":"CD4-positive or CD8-positive, alpha-beta T-lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive/CD8-positive, alpha-beta T cell lineage commitment","type":"exact"}],"termid":"GO:0043369"}


id: PBO:0066180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 5","termid":"PBO:0066180"}


id: PR:P52890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P52890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor atf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29B5.01","synonyms":[{"name":"Spom972h-atf1","type":"exact"},{"name":"protein sss1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor mts1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P52890"}


id: GO:0102798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heptanal + O2 + H2O = H+ + heptanoate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete heptaldehyde:oxygen oxidoreductase activity (obsolete GO:0102798)","termid":"GO:0102798"}


id: GO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-prenyl-L-cysteine + O2 + H2O = a prenal + L-cysteine + H2O2.","definition_xrefs":["GOC:hjd","RHEA:53892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"prenylcysteine oxidase activity","secondary_identifiers":["EC:1.8.3.5","MetaCyc:RXN-18932"],"synonyms":[{"name":"S-prenyl-L-cysteine:oxygen oxidoreductase activity","type":"related"},{"name":"prenylcysteine lyase activity","type":"related"}],"termid":"GO:0001735"}


id: PBO:0071661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 2","termid":"PBO:0071661"}


id: PBO:0049606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 9","termid":"PBO:0049606"}


id: MONDO:0007420
data:
  {"annotated_genes":["SJAG_00136"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88894],"is_not":false,"summary":null,"term":"MONDO:0007420"}]},"cv_name":"mondo","definition":"Dominant deafness-onychodystrophy (DDOD) syndrome is a multiple congenital anomalies syndrome characterized by congenital hearing impairment, small or absent nails on the hands and feet, and small terminal phalanges.","definition_xrefs":["Orphanet:79499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00136":null},"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant deafness - onychodystrophy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2675730","GARD:4732","DOID:0080720","MEDGEN:382676","OMIM:124480"],"synonyms":[{"name":"DDOD","type":"related"},{"name":"DDOD syndrome","type":"exact"},{"name":"Ddod syndrome","type":"related"},{"name":"Robinson Miller Bensimon syndrome","type":"related"},{"name":"Robinson-Miller-Bensimon syndrome","type":"related"},{"name":"autosomal dominant deafness-onychodystrophy syndrome","type":"exact"},{"name":"deafness and onychodystrophy, dominant form","type":"related"},{"name":"deafness, congenital, and onychodystrophy, autosomal dominant","type":"related"},{"name":"deafness, congenital, with onychodystrophy, autosomal dominant","type":"related"},{"name":"deafness-onychodystrophy syndrome, autosomal dominant","type":"exact"},{"name":"familial ectodermal dysplasia with sensori-neural deafness and other anomalies","type":"related"}],"termid":"MONDO:0007420","terms_by_termid":{"MONDO:0007420":null},"xrefs":{"Monarch":{"xref_id":"0007420"}}}


id: GO:0030847
data:
  {"annotated_genes":["SJAG_03179","SJAG_04527","SJAG_04006","SJAG_02156"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61924,66344,99121,109397],"is_not":false,"summary":null,"term":"GO:0030847"}]},"cv_name":"biological_process","definition":"The process in which transcription of nonpolyadenylated RNA polymerase II transcripts is terminated; coupled to the maturation of the RNA 3'-end.","definition_xrefs":["GOC:txnOH","PMID:18679429","PMID:12944462","PMID:27371117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02156":null,"SJAG_03179":null,"SJAG_04006":null,"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"termination of RNA polymerase II transcription, exosome-dependent","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"termination of RNA polymerase II transcription, poly(A)-independent","type":"exact"},{"name":"transcription termination from Pol II promoter, RNA polymerase(A)-independent","type":"exact"},{"name":"transcription termination from Pol II promoter, poly(A)-independent","type":"exact"}],"termid":"GO:0030847","terms_by_termid":{"GO:0030847":null}}


id: GO:0060849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a venous endothelial cell to a lymphatic endothelial cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in lymphatic endothelial cell fate commitment (obsolete GO:0060849)","termid":"GO:0060849"}


id: PBO:0062602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily N member 1 pseudogene","termid":"PBO:0062602"}


id: MONDO:0025453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic respiratory disease caused by the visna-maedi virus. It was formerly believed to be identical with jaagsiekte (pulmonary adenomatosis, ovine) but is now recognized as a separate entity.","definition_xrefs":["MESH:D011021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia, progressive interstitial, of sheep","synonyms":[{"name":"Maedi","type":"related"},{"name":"progressive interstitial pneumonia of sheep","type":"related"}],"termid":"MONDO:0025453","xrefs":{"Monarch":{"xref_id":"0025453"}}}


id: GO:0032490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a molecule of bacterial origin is received and converted into a molecular signal.","definition_xrefs":["GOC:rl","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of molecule of bacterial origin","synonyms":[{"name":"detection of bacteria associated molecule","type":"exact"},{"name":"detection of bacterial associated molecule","type":"exact"},{"name":"detection of bacterium associated molecule","type":"exact"}],"termid":"GO:0032490"}


id: GO:0004253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the Leu-Leu bond in synthetic tetradecapeptide renin substrate, producing angiotensin I, but not active on natural angiotensinogen. Also hydrolyzes BZ-Arg-para-nitroanilide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-renin activity (obsolete GO:0004253)","synonyms":[{"name":"gamma-renin activity","type":"exact"}],"termid":"GO:0004253"}


id: MONDO:0015463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniodigital syndrome - intellectual deficit is characterized by syndactyly of the fingers and toes, characteristic facies (`startled' facial expression with a small pointed nose, micrognathia, long dark eyelashes and prominent eyebrows) and intellectual deficit.","definition_xrefs":["Orphanet:1514"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniodigital syndrome-intellectual disability syndrome","secondary_identifiers":["MEDGEN:333293","UMLS:C1839311","MESH:C537528","SCTID:763665007","GARD:4776","OMIM:312860"],"synonyms":[{"name":"Scott Bryant Graham syndrome","type":"related"},{"name":"Scott craniodigital syndrome","type":"exact"},{"name":"Scott craniodigital syndrome with intellectual disability","type":"related"},{"name":"Scott craniodigital syndrome with mental retardation","type":"related"},{"name":"Scott-Bryant-Graham syndrome","type":"exact"},{"name":"craniodigital syndrome with intellectual disability","type":"related"},{"name":"craniodigital syndrome with mental retardation","type":"related"},{"name":"craniodigital syndrome-intellectual disability, Scott type","type":"related"},{"name":"craniodigital syndrome-mental retardation, Scott type","type":"related"},{"name":"craniodigital-intellectual disability syndrome","type":"related"}],"termid":"MONDO:0015463","xrefs":{"Monarch":{"xref_id":"0015463"}}}


id: SO:0002036
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A lncRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"lncRNA_primary_transcript","termid":"SO:0002035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_lncRNA_primary_transcript","synonyms":[{"name":"miR encoding lncRNA primary transcript","type":"exact"}],"termid":"SO:0002036"}


id: SO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A joining gene that rearranges at the DNA level and codes the joining region of the variable domain of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_J_gene","synonyms":[{"name":"IG_joining_gene","type":"exact"},{"name":"Immunoglobulin_Joining_Gene","type":"exact"},{"name":"immunoglobulin_J_gene","type":"exact"}],"termid":"SO:0002125"}


id: GO:0010027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the thylakoid membrane.","definition_xrefs":["GOC:mah","GOC:dph","GOC:jl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"thylakoid membrane organization","synonyms":[{"name":"thylakoid membrane organisation","type":"exact"},{"name":"thylakoid membrane organization and biogenesis","type":"related"}],"termid":"GO:0010027"}


id: MONDO:0015505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tracheal anomaly (obsolete MONDO:0015505)","secondary_identifiers":["Orphanet:156252","icd11.foundation:679333287"],"termid":"MONDO:0015505","xrefs":{"Monarch":{"xref_id":"0015505"}}}


id: GO:0080096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidate + a sterol = a sterol ester + a lysophosphatidate.","definition_xrefs":["PMID:16020547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"phosphatidate-sterol O-acyltransferase activity","termid":"GO:0080096"}


id: PBO:0057683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1272","termid":"PBO:0057683"}


id: GO:0016845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a carbon-nitrogen bond. Enzymes with this activity are 'miscellaneous' carbon-nitrogen lyases that cannot be grouped into one of the specific subclasses of the carbon-nitrogen lyases.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete other carbon-nitrogen lyase activity (obsolete GO:0016845)","synonyms":[{"name":"other carbon-nitrogen lyase activity","type":"exact"}],"termid":"GO:0016845"}


id: MONDO:0000450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multiple sclerosis with a clinical course characterized by a progressive accumulation of neurological disability, independent of relapses, following an initial relapsing-remitting (RR) phase.","definition_xrefs":["PMID:27166830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic progressive multiple sclerosis","termid":"MONDO:0005284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559"],"is_obsolete":false,"name":"secondary progressive multiple sclerosis","secondary_identifiers":["icd11.foundation:1045965709","UMLS:C0751965","SCTID:425500002","NANDO:1200026","MEDGEN:155969","DOID:0050783","EFO:0008522","NANDO:2201321"],"synonyms":[{"name":"SPMS","type":"exact"},{"name":"secondary-progressive MS","type":"exact"}],"termid":"MONDO:0000450","xrefs":{"Monarch":{"xref_id":"0000450"}}}


id: GO:0106117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an acidocalcisome. An acidocalcisome is an electron-dense acidic membrane-bounded organelle which contains a matrix of pyrophosphate and polyphosphates with bound calcium and other cations.","definition_xrefs":["PMID:25964650","PMID:26523947","GO:0020022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acidocalcisome organization","synonyms":[{"name":"acidocalcisome biogenesis","type":"exact"},{"name":"acidocalcisome organisation","type":"exact"},{"name":"acidocalcisome organization and biogenesis","type":"exact"},{"name":"metachromatic granule organization","type":"exact"},{"name":"polyphosphate vacuole organization","type":"related"},{"name":"volutin granule organization","type":"exact"}],"termid":"GO:0106117"}


id: GO:1901201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extracellular matrix assembly.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"regulates","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular matrix assembly","termid":"GO:1901201"}


id: PBO:0116801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 12","termid":"PBO:0116801"}


id: PBO:0028264
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_pheromone","termid":"PBO:0028264"}


id: MONDO:0005786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the hepadnaviridae.","definition_xrefs":["MESH:D018347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hepadnaviridae infectious disease","secondary_identifiers":["UMLS:C0206746","MEDGEN:64649"],"synonyms":[{"name":"Hepadnaviridae caused disease or disorder","type":"exact"},{"name":"Hepadnaviridae disease or disorder","type":"exact"}],"termid":"MONDO:0005786","xrefs":{"Monarch":{"xref_id":"0005786"}}}


id: MONDO:0008646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete long QT syndrome 1 (obsolete MONDO:0008646)","termid":"MONDO:0008646","xrefs":{"Monarch":{"xref_id":"0008646"}}}


id: MONDO:0019945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solar urticaria (SU) is a rare and difficult to treat photosensitive disease, in which local skin swelling occurs within minutes of exposure to natural sunlight or even artificial light sources emitting ultraviolet radiation.","definition_xrefs":["Orphanet:97230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"solar urticaria","secondary_identifiers":["icd11.foundation:64163683","SCTID:10347006","ICD10CM:L56.3","GARD:19353","UMLS:C0263610","MEDGEN:538004","ICD9:708.8","MedDRA:10041307"],"termid":"MONDO:0019945","xrefs":{"Monarch":{"xref_id":"0019945"}}}


id: MONDO:0060527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maleylacetoacetate isomerase deficiency","secondary_identifiers":["MEDGEN:713903","OMIM:617596","UMLS:C1291607"],"synonyms":[{"name":"MAAI deficiency","type":"related"},{"name":"MAAID","type":"related"},{"name":"benign hypersuccinylacetonemia","type":"related"},{"name":"hypersuccinylacetonemia, mild","type":"related"},{"name":"maleylacetoacetate isomerase deficiency","type":"exact"}],"termid":"MONDO:0060527","xrefs":{"Monarch":{"xref_id":"0060527"}}}


id: GO:0006329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete satellite DNA binding (obsolete GO:0006329)","synonyms":[{"name":"satellite DNA binding","type":"exact"}],"termid":"GO:0006329"}


id: GO:1903465
data:
  {"annotated_genes":["SJAG_03048","SJAG_02074","SJAG_03160","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104276],"is_not":false,"summary":null,"term":"GO:1903465"},{"annotations":[114002,105224,119269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cell cycle DNA replication.","definition_xrefs":["PMID:1234","GOC:TermGenie","GOC:mtg_cell_cycle","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclear cell cycle DNA replication","termid":"GO:0010571"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle DNA replication","termid":"GO:1903463"},{"relation_name":"positively_regulates","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02074":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"activation of DNA replication involved in S phase involved in mitotic cell cycle","type":"narrow"},{"name":"activation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"narrow"},{"name":"activation of mitotic cell cycle DNA replication","type":"narrow"},{"name":"activation of mitotic nuclear cell cycle DNA replication","type":"narrow"},{"name":"activation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"positive regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"positive regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"positive regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"up regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"up regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"up regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"up regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"up-regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"up-regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"up-regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"up-regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"upregulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"upregulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"upregulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"upregulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903465","terms_by_termid":{"GO:1903465":null,"GO:1903468":null}}


id: PR:O14032
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.11c gene.","definition_xrefs":["UniProtKB:O14032","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0664 stress-induced protein C29B12.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.11c","synonyms":[{"name":"Spom972h-SPAC29B12.11c","type":"exact"}],"termid":"PR:O14032"}


id: PBO:0029839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_during_vegetative_growth","termid":"PBO:0029839"}


id: MONDO:1012834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa that occurs in dogs due to a mutation in the LAMB3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa, dog","termid":"MONDO:1011548"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional epidermolysis bullosa, LAMB3-related, dog","secondary_identifiers":["OMIA:002269-9615"],"synonyms":[{"name":"epidermolysis bullosa, junctionalis, LAMB3-related, dog","type":"exact"}],"termid":"MONDO:1012834","xrefs":{"Monarch":{"xref_id":"1012834"}}}


id: PBO:0050202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 19","termid":"PBO:0050202"}


id: PBO:0078926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 2-2","termid":"PBO:0078926"}


id: GO:0021741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the spinal trigeminal nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:curators","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal sensory nucleus development","termid":"GO:0021730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal trigeminal nucleus development","termid":"GO:0021741"}


id: PBO:0045387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 9","termid":"PBO:0045387"}


id: PBO:0040863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper nuclear factor 2, pseudogene","termid":"PBO:0040863"}


id: FYECO:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which vanadate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ vanadate","synonyms":[{"name":"sodium orthovanadate added","type":"exact"}],"termid":"FYECO:0000026"}


id: MONDO:1012425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital merosin-deficient muscular dystrophy, non-human animal","termid":"MONDO:1011802"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital merosin-deficient muscular dystrophy, domestic cat","secondary_identifiers":["OMIA:001619-9685"],"termid":"MONDO:1012425","xrefs":{"Monarch":{"xref_id":"1012425"}}}


id: PBO:0064559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POMP pseudogene 1","termid":"PBO:0064559"}


id: GO:0099502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulatory process by which increased cytosolic calcium levels lead to the the fusion of synaptic vesicles with the presynaptic active zone membrane by bringing primed synaptic vesicle membrane into contact with membrane presynaptic active zone membrane.","definition_xrefs":["PMID:23060190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031632"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0023052","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0099502"}


id: GO:0030505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of inorganic diphosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"inorganic diphosphate transport","synonyms":[{"name":"inorganic pyrophosphate transport","type":"exact"}],"termid":"GO:0030505"}


id: PATO:0000550
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000550 red light sensitivity value (obsolete PATO:0000550)","termid":"PATO:0000550"}


id: MONDO:0008986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circumvallate placenta syndrome","secondary_identifiers":["OMIM:215550","UMLS:C1859089","MEDGEN:347062","MESH:C565847"],"synonyms":[{"name":"circumvallate placenta syndrome","type":"exact"}],"termid":"MONDO:0008986","xrefs":{"Monarch":{"xref_id":"0008986"}}}


id: MONDO:0001264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kyasanur forest disease (obsolete MONDO:0001264)","termid":"MONDO:0001264","xrefs":{"Monarch":{"xref_id":"0001264"}}}


id: PBO:0090937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component, with EF hand and WH2 motif Panl","termid":"PBO:0090937"}


id: PBO:0054069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1416","termid":"PBO:0054069"}


id: PBO:0011113
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged SPNCRNA.994 with SPNCRNA.130","termid":"PBO:0011113"}


id: PBO:0034040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_positively_regulates","termid":"PBO:0034040"}


id: PBO:0028254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitotic_G2_phase","termid":"PBO:0028254"}


id: MONDO:0010402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic X-linked intellectual disability characterized by moderate intellectual disability with variable occurrence of asthenic body habitus, dysmorphic features, autistic features, macrocephaly, seizures, myoclonic jerks, and hyporeflexia that has material basis in mutation in the GRIA3 gene on chromosome Xq25.","definition_xrefs":["PMID:24721225","DOID:0060823","PMID:17989220","PMID:19449417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic X-linked intellectual disability 94","secondary_identifiers":["MESH:C567479","UMLS:C2678051","OMIM:300699","MEDGEN:437111"],"synonyms":[{"name":"MRX94","type":"exact"},{"name":"MRXS29","type":"exact"},{"name":"MRXSW","type":"related"},{"name":"intellectual developmental disorder, X-linked, syndromic, Wu type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 94","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 29","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Wu type","type":"related"},{"name":"mental retardation, X-linked 94","type":"exact"},{"name":"mental retardation, X-linked, syndromic 29","type":"related"},{"name":"mental retardation, X-linked, syndromic, Wu type","type":"related"},{"name":"syndromic X-linked intellectual disability 29","type":"exact"},{"name":"syndromic X-linked intellectual disability 94","type":"exact"},{"name":"syndromic X-linked intellectual disability Wu type","type":"exact"},{"name":"syndromic X-linked intellectual disability due to GRIA3 anomalies","type":"exact"},{"name":"syndromic X-linked intellectual disability type 94","type":"exact"},{"name":"syndromic X-linked mental retardation 29","type":"exact"},{"name":"syndromic X-linked mental retardation Wu type","type":"exact"}],"termid":"MONDO:0010402","xrefs":{"Monarch":{"xref_id":"0010402"}}}


id: PBO:0089621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl6","termid":"PBO:0089621"}


id: PBO:0004220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago Nashi interacting protein (predicted)","termid":"PBO:0004220"}


id: PBO:0002622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl5 (predicted)","termid":"PBO:0002622"}


id: PBO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XP-G family","termid":"PBO:0000281"}


id: PBO:0082846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding protein of mitochondrial inner membrane; required for cytochrome c oxidase activity and respiration; may function to deliver copper to cytochrome c oxidase; similar to thioredoxins; SCO1 has a paralog, SCO2, that arose from the whole genome duplication","termid":"PBO:0082846"}


id: PBO:0109119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 3, actin N3(tau)-histidine methyltransferase","termid":"PBO:0109119"}


id: PBO:0060246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCBP2 antisense RNA 1","termid":"PBO:0060246"}


id: PBO:0075416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 1","termid":"PBO:0075416"}


id: PBO:0091338
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.1625092_1625093insC","termid":"PBO:0091338"}


id: MONDO:0036870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm arising from the lymphatic vessels.","definition_xrefs":["NCIT:C3723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"},{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic vessel neoplasm","secondary_identifiers":["MEDGEN:64616","UMLS:C0206619"],"synonyms":[{"name":"lymph vessel neoplasm","type":"exact"},{"name":"lymph vessel tumor","type":"exact"},{"name":"lymph vessel tumour","type":"exact"},{"name":"lymphatic vessel neoplasm","type":"exact"},{"name":"lymphatic vessel tumor","type":"exact"},{"name":"lymphatic vessel tumour","type":"exact"},{"name":"neoplasm of lymph vessel","type":"exact"},{"name":"neoplasm of lymphatic vessel","type":"exact"},{"name":"neoplasm of the lymph vessel","type":"exact"},{"name":"neoplasm of the lymphatic vessel","type":"exact"},{"name":"tumor of lymph vessel","type":"exact"},{"name":"tumor of lymphatic vessel","type":"exact"},{"name":"tumor of the lymph vessel","type":"exact"},{"name":"tumor of the lymphatic vessel","type":"exact"},{"name":"tumour of lymph vessel","type":"exact"},{"name":"tumour of lymphatic vessel","type":"exact"},{"name":"tumour of the lymph vessel","type":"exact"},{"name":"tumour of the lymphatic vessel","type":"exact"}],"termid":"MONDO:0036870","xrefs":{"Monarch":{"xref_id":"0036870"}}}


id: GO:0005178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an integrin.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"},{"relation_name":"is_a","term_name":"cell adhesion molecule binding","termid":"GO:0050839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"integrin binding","synonyms":[{"name":"integrin ligand","type":"narrow"}],"termid":"GO:0005178"}


id: FYPO:0005693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from one or more microtubule organizing centers (MTOCs) is does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule nucleation during vegetative growth","termid":"FYPO:0005692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule nucleation","synonyms":[{"name":"abolished cytoplasmic microtubule nucleation during mitotic cell cycle","type":"related"},{"name":"abolished cytoplasmic microtubule nucleation during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubule nucleation abolished","type":"exact"}],"termid":"FYPO:0005693"}


id: GO:1905545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of regulation of ferrichrome biosynthetic process by negative regulation of transcription from RNA polymerase II promoter in response to iron.","definition_xrefs":["PMID:20435771","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of regulation of ferrichrome biosynthetic process by negative regulation of transcription from RNA polymerase II promoter in response to iron (obsolete GO:1905545)","synonyms":[{"name":"down regulation of regulation of ferrichrome anabolism by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome anabolism by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome anabolism by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome anabolism by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome anabolism by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome anabolism by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome biosynthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome biosynthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome biosynthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome biosynthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome biosynthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome biosynthetic process by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome biosynthetic process by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome biosynthetic process by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome biosynthetic process by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthetic process by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome biosynthetic process by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome biosynthetic process, peptide formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthetic process, peptide formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthetic process, peptide formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthetic process, peptide formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthetic process, peptide formation by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthetic process, peptide formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthetic process, peptide modification by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthetic process, peptide modification by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthetic process, peptide modification by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthetic process, peptide modification by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome formation by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome synthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome synthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome synthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome synthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down regulation of regulation of ferrichrome synthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"down regulation of regulation of ferrichrome synthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome anabolism by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome anabolism by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome anabolism by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome anabolism by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down-regulation of regulation of ferrichrome anabolism by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome anabolism by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome biosynthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome biosynthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome biosynthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome biosynthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down-regulation of regulation of ferrichrome biosynthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome biosynthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process, peptide formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process, peptide formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process, peptide formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process, peptide formation by inhibition of transcription from RNA polymerase II promoter in response to 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response to iron","type":"narrow"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process, peptide modification by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"down-regulation of regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down-regulation of regulation of ferrichrome formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down-regulation of regulation of ferrichrome formation by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome synthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome synthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome synthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome synthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"down-regulation of regulation of ferrichrome synthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"down-regulation of regulation of ferrichrome synthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"downregulation of regulation of ferrichrome anabolism by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"downregulation of regulation of ferrichrome anabolism by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"downregulation of regulation of ferrichrome anabolism by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"downregulation of regulation of ferrichrome anabolism by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"downregulation of regulation of ferrichrome anabolism by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"downregulation of regulation of ferrichrome anabolism by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"downregulation of regulation of ferrichrome biosynthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"downregulation of regulation of ferrichrome biosynthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"downregulation of regulation of ferrichrome biosynthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"downregulation of regulation of ferrichrome biosynthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"downregulation of regulation of ferrichrome biosynthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"downregulation of regulation of ferrichrome biosynthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"downregulation of regulation of ferrichrome biosynthetic process by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"downregulation of regulation of ferrichrome biosynthetic process by down-regulation of transcription 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to iron","type":"narrow"},{"name":"inhibition of regulation of ferrichrome biosynthetic process, peptide formation by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"inhibition of regulation of ferrichrome biosynthetic process, peptide formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"inhibition of regulation of ferrichrome biosynthetic process, peptide modification by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"inhibition of regulation of ferrichrome biosynthetic process, peptide modification by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"inhibition of regulation of ferrichrome biosynthetic process, peptide modification by downregulation of transcription from RNA polymerase II promoter in response to 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downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"inhibition of regulation of ferrichrome formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"inhibition of regulation of ferrichrome formation by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"inhibition of regulation of ferrichrome formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"inhibition of regulation of ferrichrome synthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"inhibition of regulation of ferrichrome synthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"inhibition of regulation of ferrichrome synthesis by downregulation of 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regulation of ferrichrome biosynthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome biosynthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"negative regulation of regulation of ferrichrome biosynthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome biosynthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome biosynthetic process by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome biosynthetic process by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome biosynthetic process by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome biosynthetic process by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"negative regulation of regulation of ferrichrome biosynthetic process by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome biosynthetic process, peptide formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"negative regulation of regulation of ferrichrome biosynthetic process, peptide formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"negative 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iron","type":"narrow"},{"name":"negative regulation of regulation of ferrichrome biosynthetic process, peptide modification by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"negative regulation of regulation of ferrichrome biosynthetic process, peptide modification by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"negative regulation of regulation of ferrichrome biosynthetic process, peptide modification by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"negative regulation of regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"negative regulation of regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"negative regulation of regulation of ferrichrome formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"negative regulation of regulation of ferrichrome formation by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome synthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome synthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome synthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome synthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"negative regulation of regulation of ferrichrome synthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"negative regulation of regulation of ferrichrome synthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"}],"termid":"GO:1905545"}


id: GO:0033557
data:
  {"annotated_genes":["SJAG_05180","SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61026,67740],"is_not":false,"summary":null,"term":"GO:0033557"}]},"cv_name":"cellular_component","definition":"A heterodimeric protein complex that possesses an endonuclease activity that specifically cleaves certain types of branched DNA structures; because such structures often form during the replication ribosomal DNA (rDNA) repeats, the complex plays a role in the maintenance of rDNA. The subunits are known as Slx1 and Slx 4 in budding and fission yeasts, and are conserved in eukaryotes.","definition_xrefs":["PMID:16467377","PMID:14528010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":2,"genes_by_uniquename":{"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"Slx1-Slx4 complex","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0033557","terms_by_termid":{"GO:0033557":null}}


id: PBO:0063463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor alpha","termid":"PBO:0063463"}


id: PBO:0045951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like domain multiple 7","termid":"PBO:0045951"}


id: PBO:0077083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF interacting protein with forkhead associated domain","termid":"PBO:0077083"}


id: GO:0050571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-anhydro-D-glucitol + NADP+ = 1,5-anhydro-D-fructose + H+ + NADPH.","definition_xrefs":["RHEA:20665","EC:1.1.1.263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose reductase activity","secondary_identifiers":["MetaCyc:1.1.1.263-RXN","KEGG_REACTION:R05682"],"synonyms":[{"name":"1,5-anhydro-D-glucitol:NADP+ oxidoreductase activity","type":"related"},{"name":"AF reductase activity","type":"related"}],"termid":"GO:0050571"}


id: PBO:0067922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 224","termid":"PBO:0067922"}


id: MONDO:0017990
data:
  {"annotated_genes":["SJAG_02717","SJAG_04901","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013529"},{"annotations":[89003,89004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013966"},{"annotations":[88519,88520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"}]},"cv_name":"mondo","definition":"Catecholaminergic polymorphic ventricular tachycardia (CPVT) is a severe genetic arrhythmogenic disorder characterized by adrenergically induced ventricular tachycardia (VT) manifesting as syncope and sudden death.","definition_xrefs":["Orphanet:3286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"ventricular tachycardia, familial","termid":"MONDO:0008648"},{"relation_name":"is_a","term_name":"polymorphic ventricular tachycardia","termid":"MONDO:0020575"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02717":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"catecholaminergic polymorphic ventricular tachycardia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536334","icd11.foundation:976309888","NANDO:2200216","MEDGEN:1803763","GARD:4421","UMLS:C5574922","SCTID:419671004","NANDO:2200221","OMIMPS:604772","DOID:0060674","ICD10CM:I47.2"],"synonyms":[{"name":"CPVT","type":"exact"},{"name":"bidirectional tachycardia induced by catecholamine","type":"exact"},{"name":"catecholamine-induced polymorphic ventricular tachycardia","type":"related"},{"name":"catecholaminergic polymorphic ventricular tachycardia","type":"exact"},{"name":"double tachycardia induced by catecholamines","type":"exact"},{"name":"familial polymorphic ventricular tachycardia","type":"related"},{"name":"malignant paroxysmal ventricular tachycardia","type":"exact"},{"name":"multifocal ventricular premature beats","type":"exact"},{"name":"polymorphic catecholergic ventricular tachycardia","type":"related"},{"name":"stress-induced polymorphic ventricular tachycardia","type":"related"},{"name":"syncopal paroxysmal tachycardia","type":"related"},{"name":"ventricular tachycardia, catecholaminergic polymorphic","type":"exact"}],"termid":"MONDO:0017990","terms_by_termid":{"MONDO:0013529":null,"MONDO:0013966":null,"MONDO:0032915":null},"xrefs":{"Monarch":{"xref_id":"0017990"}}}


id: PBO:0070453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 10","termid":"PBO:0070453"}


id: SO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short open reading frame that is found in the 5' untranslated region of an mRNA and plays a role in translational regulation.","definition_xrefs":["PMID:16153175","PMID:12890013","POMBASE:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ORF","termid":"SO:0000236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uORF","secondary_identifiers":["PMID:26684391"],"synonyms":[{"name":"regulatory uORF","type":"exact"},{"name":"upstream ORF","type":"exact"}],"termid":"SO:0002027"}


id: PBO:0112981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); directly phosphorylated by TORC1 in a Pib2-dependent manner; localizes to the cytoplasm; ER3 has a paralog, SER33, that arose from the whole genome duplication","termid":"PBO:0112981"}


id: PBO:0068534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 136, pseudogene","termid":"PBO:0068534"}


id: PBO:0079234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 9","termid":"PBO:0079234"}


id: PBO:0090301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Rrp8","termid":"PBO:0090301"}


id: PBO:0086368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative amidase","termid":"PBO:0086368"}


id: PBO:0038383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hemiparasite_of","termid":"PBO:0038383"}


id: PBO:0116682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 13B","termid":"PBO:0116682"}


id: PBO:0041873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpastatin","termid":"PBO:0041873"}


id: MONDO:0010305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked creatine transporter deficiency (CRTR-D) is a creatine deficiency syndrome characterized clinically by global developmental delay/ intellectual disability (DD/ID) with prominent speech/language delay, autistic behavior and seizures.","definition_xrefs":["Orphanet:52503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral creatine deficiency syndrome","termid":"MONDO:0000456"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"creatine transporter deficiency","secondary_identifiers":["NANDO:2201301","SCTID:698290008","GARD:1608","MESH:C535598","DOID:0050800","NANDO:1201035","UMLS:C1845862","ICD9:758.81","MEDGEN:337451","OMIM:300352","NCIT:C125665"],"synonyms":[{"name":"CCDS1","type":"related"},{"name":"SLC6A8 deficiency","type":"exact"},{"name":"X-linked creatine deficiency","type":"related"},{"name":"X-linked creatine deficiency syndrome","type":"related"},{"name":"X-linked creatine transporter deficiency","type":"related"},{"name":"cerebral creatine deficiency syndrome 1","type":"exact"},{"name":"cerebral creatine deficiency syndrome 1, X-linked recessive","type":"exact"},{"name":"cerebral creatine deficiency syndrome type 1","type":"exact"},{"name":"creatine deficiency syndrome, X-linked","type":"related"},{"name":"creatine deficiency, X-linked","type":"related"},{"name":"creatine transporter defect","type":"related"},{"name":"creatine transporter deficiency","type":"exact"},{"name":"intellectual disability, X-linked with seizures, short stature and midface hypoplasia","type":"related"},{"name":"intellectual disability, X-linked, with creatine Transport deficiency","type":"related"},{"name":"intellectual disability, X-linked, with creatine transport deficiency","type":"related"},{"name":"intellectual disability, X-linked, with seizures, short stature, and midface hypoplasia","type":"related"},{"name":"mental retardation, X-linked with seizures, short stature and midface hypoplasia","type":"related"},{"name":"mental retardation, X-linked, with creatine Transport deficiency","type":"related"},{"name":"mental retardation, X-linked, with creatine transport deficiency","type":"related"},{"name":"mental retardation, X-linked, with seizures, short stature, and midface hypoplasia","type":"related"}],"termid":"MONDO:0010305","xrefs":{"Monarch":{"xref_id":"0010305"}}}


id: PBO:0090509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase delta subunit Swp1","termid":"PBO:0090509"}


id: PBO:0039874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 31","termid":"PBO:0039874"}


id: GO:0050402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylono-1,4-lactone + H2O = D-xylonate.","definition_xrefs":["EC:3.1.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"xylono-1,4-lactonase activity","secondary_identifiers":["MetaCyc:RXN-19753","RHEA:18341"],"synonyms":[{"name":"D-xylono-1,4-lactone lactonohydrolase activity","type":"related"},{"name":"xylono-g-lactonase activity","type":"related"},{"name":"xylonolactonase activity","type":"related"}],"termid":"GO:0050402"}


