# terms

id: GO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between RNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-5'-RNA)-L-tyrosine.","definition_xrefs":["RESID:AA0249"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA-protein covalent cross-linking via peptidyl-tyrosine (obsolete GO:0018148)","termid":"GO:0018148"}


id: GO:0034674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha5 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"integrin alpha5-beta1 complex","synonyms":[{"name":"ITGA5-ITGB1 complex","type":"narrow"},{"name":"VLA-5 complex","type":"exact"},{"name":"alpha5-beta1 integrin complex","type":"exact"}],"termid":"GO:0034674"}


id: PBO:0013132
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPHerical shape","termid":"PBO:0013132"}


id: MONDO:0031446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare genetic disorder characterized clinically by elevated serum bile acid concentrations, itching, and fat malabsorption reported in patients of Old Order Amish descent.","definition_xrefs":["Orphanet:238475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypercholanemia, familial","termid":"MONDO:0100327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"hypercholanemia, familial 1","secondary_identifiers":["GARD:17173","MESH:C564336","MEDGEN:1781366","OMIM:607748","SCTID:723360007","UMLS:C5542604"],"synonyms":[{"name":"FHCA1","type":"exact"},{"name":"hereditary hypercholanemia","type":"broad"}],"termid":"MONDO:0031446","xrefs":{"Monarch":{"xref_id":"0031446"}}}


id: MONDO:0000732
data:
  {"annotated_genes":["SJAG_00308","SJAG_01174","SJAG_01368","SJAG_00997","SJAG_00894","SJAG_01503","SJAG_00133","SJAG_01577","SJAG_02201","SJAG_05271","SJAG_05560","SJAG_02548","SJAG_01575","SJAG_04862","SJAG_04588","SJAG_07003","SJAG_04317","SJAG_02721","SJAG_03155","SJAG_01589","SJAG_02615","SJAG_01413","SJAG_05218","SJAG_04367","SJAG_01797","SJAG_04885","SJAG_00255","SJAG_03585","SJAG_01890","SJAG_00186","SJAG_03584","SJAG_01640","SJAG_03563","SJAG_02353","SJAG_01303","SJAG_02564","SJAG_02302","SJAG_03104","SJAG_16456","SJAG_00513","SJAG_04378","SJAG_03014","SJAG_04019","SJAG_01004","SJAG_02452","SJAG_02428","SJAG_04856","SJAG_03461","SJAG_03071","SJAG_02324","SJAG_02016"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89007,89008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013969"},{"annotations":[88847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013986"},{"annotations":[88846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013987"},{"annotations":[87742,87741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014190"},{"annotations":[87796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012510"},{"annotations":[88088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014397"},{"annotations":[88089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014398"},{"annotations":[88543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014525"},{"annotations":[87233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014547"},{"annotations":[87056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014636"},{"annotations":[86917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014684"},{"annotations":[87675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012534"},{"annotations":[89053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013306"},{"annotations":[87783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013570"},{"annotations":[88274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013811"},{"annotations":[87471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014269"},{"annotations":[88694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020727"},{"annotations":[87750,87751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014775"},{"annotations":[87036,87037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054677"},{"annotations":[86919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054741"},{"annotations":[86918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054742"},{"annotations":[87814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054781"},{"annotations":[87928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032712"},{"annotations":[87950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032726"},{"annotations":[87326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030006"},{"annotations":[87327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030007"},{"annotations":[87331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030008"},{"annotations":[87338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030017"},{"annotations":[87183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033533"},{"annotations":[87185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033534"},{"annotations":[87184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033537"},{"annotations":[88379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030311"},{"annotations":[88921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859228"},{"annotations":[87530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859323"},{"annotations":[87414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859337"},{"annotations":[87875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957992"},{"annotations":[87787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012512"},{"annotations":[87649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014261"},{"annotations":[87257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012191"},{"annotations":[87775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014162"},{"annotations":[88801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014976"},{"annotations":[89013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013971"},{"annotations":[88683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032869"},{"annotations":[86926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014091"},{"annotations":[87312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011421"},{"annotations":[88364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957254"},{"annotations":[88363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957255"},{"annotations":[87960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013865"},{"annotations":[88723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010437"}]},"cv_name":"mondo","definition":"A mitochondrial oxidative phosphorylation disorder in which multiple mitochondrial respiratory chain complexes are affected.","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation 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oxidative phosphorylation deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1953023896","UMLS:C4540031","DOID:0060286","MEDGEN:1626645","OMIMPS:609060"],"termid":"MONDO:0000732","terms_by_termid":{"MONDO:0010437":null,"MONDO:0011421":null,"MONDO:0012191":null,"MONDO:0012510":null,"MONDO:0012512":null,"MONDO:0012534":null,"MONDO:0013306":null,"MONDO:0013570":null,"MONDO:0013811":null,"MONDO:0013865":null,"MONDO:0013969":null,"MONDO:0013971":null,"MONDO:0013986":null,"MONDO:0013987":null,"MONDO:0014091":null,"MONDO:0014162":null,"MONDO:0014190":null,"MONDO:0014261":null,"MONDO:0014269":null,"MONDO:0014397":null,"MONDO:0014398":null,"MONDO:0014525":null,"MONDO:0014547":null,"MONDO:0014636":null,"MONDO:0014684":null,"MONDO:0014775":null,"MONDO:0014976":null,"MONDO:0020727":null,"MONDO:0030006":null,"MONDO:0030007":null,"MONDO:0030008":null,"MONDO:0030017":null,"MONDO:0030311":null,"MONDO:0032712":null,"MONDO:0032726":null,"MONDO:0032869":null,"MONDO:0033533":null,"MONDO:0033534":null,"MONDO:0033537":null,"MONDO:0054677":null,"MONDO:0054741":null,"MONDO:0054742":null,"MONDO:0054781":null,"MONDO:0859228":null,"MONDO:0859323":null,"MONDO:0859337":null,"MONDO:0957254":null,"MONDO:0957255":null,"MONDO:0957992":null},"xrefs":{"Monarch":{"xref_id":"0000732"}}}


id: GO:0047041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-carnitine + NAD+ = 3-dehydrocarnitine + H+ + NADH.","definition_xrefs":["RHEA:11556","EC:1.1.1.254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-carnitine 3-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.254-RXN","KEGG_REACTION:R01921"],"synonyms":[{"name":"(S)-carnitine:NAD+ oxidoreductase activity","type":"related"},{"name":"D-carnitine dehydrogenase activity","type":"related"}],"termid":"GO:0047041"}


id: GO:0043605
data:
  {"annotated_genes":["SJAG_00035","SJAG_03586","SJAG_04679","SJAG_05287","SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96319],"is_not":false,"summary":null,"term":"GO:0043605"},{"annotations":[63074,77040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000256"},{"annotations":[73411,66714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043419"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_02766":null,"SJAG_03586":null,"SJAG_04679":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amide catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular amide catabolic process","type":"exact"}],"termid":"GO:0043605","terms_by_termid":{"GO:0000256":null,"GO:0043419":null,"GO:0043605":null}}


id: GO:0042290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete URM1 hydrolase activity (obsolete GO:0042290)","synonyms":[{"name":"URM1 hydrolase activity","type":"exact"}],"termid":"GO:0042290"}


id: SO:0001958
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of intron whereby the excision is driven by lariat formation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lariat_intron","synonyms":[{"name":"lariat intron","type":"exact"}],"termid":"SO:0001958"}


id: PBO:0059413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35 pseudogene 3","termid":"PBO:0059413"}


id: GO:0070164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of adiponectin from a cell.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of adiponectin secretion","termid":"GO:0070163"},{"relation_name":"negatively_regulates","term_name":"adiponectin secretion","termid":"GO:0070162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of adiponectin secretion","synonyms":[{"name":"down regulation of adiponectin secretion","type":"exact"},{"name":"down-regulation of adiponectin secretion","type":"exact"},{"name":"downregulation of adiponectin secretion","type":"exact"},{"name":"inhibition of adiponectin secretion","type":"narrow"}],"termid":"GO:0070164"}


id: PBO:0077473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 192","termid":"PBO:0077473"}


id: PBO:0080455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2A","termid":"PBO:0080455"}


id: PBO:0031687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_peroxisomal_transport","termid":"PBO:0031687"}


id: MONDO:0020539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal germ cell tumor","termid":"MONDO:0018201"},{"relation_name":"is_a","term_name":"nongerminomatous germ cell tumor","termid":"MONDO:0021656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extragonadal non-dysgerminomatous germ cell tumor","secondary_identifiers":["UMLS:C5681817","MEDGEN:1843056","GARD:19706","Orphanet:99913"],"termid":"MONDO:0020539","xrefs":{"Monarch":{"xref_id":"0020539"}}}


id: PBO:0031515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_binding","termid":"PBO:0031515"}


id: GO:0021903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural tube is divided into specific regions along the rostrocaudal axis.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"neural tube patterning","termid":"GO:0021532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rostrocaudal neural tube patterning","synonyms":[{"name":"anterior-posterior neural tube patterning","type":"related"}],"termid":"GO:0021903"}


id: PBO:0066605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T2","termid":"PBO:0066605"}


id: FYPO:0003367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize pyridoxine, and therefore requires pyridoxine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for pyridoxine","synonyms":[{"name":"growth auxotrophic for pyridoxine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for pyridoxine during vegetative growth","type":"exact"},{"name":"pyridoxine auxotrophy","type":"exact"}],"termid":"FYPO:0003367"}


id: GO:0102842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:1-2-16:3-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:2-monogalactosyldiacylglycerol desaturase activity (SN2-16:3 forming) (obsolete GO:0102842)","termid":"GO:0102842"}


id: MONDO:1011106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polycystic kidney disease that occurs in pigs due to a mutation in the PKD2 gene created using gene editing.","definition_xrefs":["OMIA:002525-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, pig","termid":"MONDO:1011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, PKD2-related, pig","synonyms":[{"name":"polycystic kidney disease-2, pig","type":"related"}],"termid":"MONDO:1011106","xrefs":{"Monarch":{"xref_id":"1011106"}}}


id: PBO:0049983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible lipid droplet associated","termid":"PBO:0049983"}


id: PBO:0000480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide synthase Aur1 (predicted)","termid":"PBO:0000480"}


id: PBO:0068727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 16, pseudogene","termid":"PBO:0068727"}


id: PBO:0000315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lipid phosphatase (predicted)","termid":"PBO:0000315"}


id: PATO:0000225
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000225 sensory function (obsolete PATO:0000225)","termid":"PATO:0000225"}


id: PBO:0069460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 725, pseudogene","termid":"PBO:0069460"}


id: PBO:0067249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 322, pseudogene","termid":"PBO:0067249"}


id: MONDO:0004082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immature teratoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood teratoma of the ovary","termid":"MONDO:0003819"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"},{"relation_name":"is_a","term_name":"immature ovarian teratoma","termid":"MONDO:0018369"},{"relation_name":"is_a","term_name":"childhood gonadal germ cell tumor","termid":"MONDO:0020577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood immature teratoma of ovary","secondary_identifiers":["UMLS:C1332990","DOID:7037","MEDGEN:232353","NCIT:C6547"],"synonyms":[{"name":"childhood immature ovarian teratoma","type":"exact"},{"name":"childhood immature teratoma of the ovary","type":"exact"},{"name":"childhood ovarian immature teratoma","type":"exact"},{"name":"immature ovarian teratoma of childhood","type":"exact"},{"name":"paediatric immature ovarian teratoma","type":"exact"},{"name":"paediatric immature teratoma of ovary","type":"exact"},{"name":"paediatric immature teratoma of the ovary","type":"exact"},{"name":"paediatric ovarian immature teratoma","type":"exact"},{"name":"pediatric immature ovarian teratoma","type":"exact"},{"name":"pediatric immature teratoma of ovary","type":"exact"},{"name":"pediatric immature teratoma of the ovary","type":"exact"},{"name":"pediatric ovarian immature teratoma","type":"exact"}],"termid":"MONDO:0004082","xrefs":{"Monarch":{"xref_id":"0004082"}}}


id: PR:O13836
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- din1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping nuclease din1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.06c","synonyms":[{"name":"Spom972h-din1","type":"exact"},{"name":"dhp1-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13836"}


id: FYPO:0007438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which activation of the mitotic spindle assembly checkpoint begins earlier than normal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:28017606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"premature activation of mitotic spindle assembly checkpoint","synonyms":[{"name":"advanced activation of mitotic spindle assembly checkpoint","type":"exact"},{"name":"premature activation of mitotic cell cycle spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0007438"}


id: FYPO:0006758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is too low to detect during G1 phase of the mitotic cell cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein absent from cell during vegetative growth","termid":"FYPO:0001984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"protein absent from cell during mitotic G1 phase","synonyms":[{"name":"protein absent from cell during G1 phase during vegetative growth","type":"exact"},{"name":"protein absent from cell during G1 phase of mitotic cell cycle","type":"exact"},{"name":"undetectable cellular protein level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006758"}


id: FYPO:0007871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the lateral cortex of a cell is decreased, and some of the protein is detected distributed throughout the cell cortex. There may be little or no protein detected at the medial cortex.","definition_xrefs":["PomBase:mah","PMID:34533984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to lateral cell cortex, with protein distributed in cell cortex, during vegetative growth","synonyms":[{"name":"decreased protein localisation to lateral cell cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell side, with protein distributed in cell cortex, during vegetative growth","type":"related"},{"name":"decreased protein localization to lateral cell cortex, with protein distributed in cell cortex, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to lateral cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"reduced protein localization to lateral cell cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"}],"termid":"FYPO:0007871"}


id: GO:0043032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stimulates, induces or increases the rate of macrophage activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of macrophage activation","termid":"GO:0043030"},{"relation_name":"positively_regulates","term_name":"macrophage activation","termid":"GO:0042116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage activation","synonyms":[{"name":"activation of macrophage activation","type":"narrow"},{"name":"positive regulation of macrophage polarization","type":"exact"},{"name":"stimulation of macrophage activation","type":"narrow"},{"name":"up regulation of macrophage activation","type":"exact"},{"name":"up-regulation of macrophage activation","type":"exact"},{"name":"upregulation of macrophage activation","type":"exact"}],"termid":"GO:0043032"}


id: SO:0000880
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains the code for more than one gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_attribute","termid":"SO:0000237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic","termid":"SO:0000880"}


id: PBO:0075414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome developmental regulator","termid":"PBO:0075414"}


id: MONDO:0002804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm arising from the apocrine sweat glands. Representative examples include tubular apocrine adenoma and external auditory canal ceruminous adenoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apocrine sweat gland neoplasm","termid":"MONDO:0003686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"apocrine adenoma","secondary_identifiers":["NCIT:C4168","DOID:3895","MEDGEN:90767","ICDO:8401/0","UMLS:C0334345","SCTID:307596009"],"synonyms":[{"name":"tubular apocrine adenoma","type":"narrow"}],"termid":"MONDO:0002804","xrefs":{"Monarch":{"xref_id":"0002804"}}}


id: PBO:0060942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 2 like 3 pseudogene 2","termid":"PBO:0060942"}


id: PBO:0000512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-tRNA processing endonuclease tRNAse Z L2 Trz1 (predicted)","termid":"PBO:0000512"}


id: GO:0052168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the host calcium-dependent protein kinase signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of defense-related host calcium-dependent protein kinase pathway (obsolete GO:0052168)","synonyms":[{"name":"modulation by organism of defense-related calcium-dependent protein kinase pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of defense-related host CDPK pathway","type":"exact"}],"termid":"GO:0052168"}


id: GO:0048232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of the male gamete; specialised haploid cells produced by meiosis and along with a female gamete takes part in sexual reproduction.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male gamete generation","termid":"GO:0048232"}


id: MONDO:0015770
data:
  {"annotated_genes":["SJAG_04398","SJAG_00301","SJAG_02829","SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[88678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[87023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[88511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"}]},"cv_name":"mondo","definition":"Congenital hypogonadotropic hypogonadism (CHH) is a rare disorder of sexual maturation characterized by gonadotropin (Gn) deficiency with low sex steroid levels associated with low levels of follicle stimulating hormone (FSH) and luteinizing hormone (LH).","definition_xrefs":["Orphanet:174590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"},{"relation_name":"is_a","term_name":"non-acquired pituitary hormone deficiency","termid":"MONDO:0019824"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_02829":null,"SJAG_04110":null,"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"congenital hypogonadotropic hypogonadism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1752075408","NANDO:1200383","SCTID:722944006","NCIT:C120162","UMLS:C3899503","ICD10CM:E23.0","MEDGEN:859097","GARD:20135"],"termid":"MONDO:0015770","terms_by_termid":{"MONDO:0008980":null,"MONDO:0009514":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0014497":null},"xrefs":{"Monarch":{"xref_id":"0015770"}}}


id: GO:0010155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proton transport into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"proton transmembrane transport","termid":"GO:1902600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of proton transport","termid":"GO:0010155"}


id: PBO:0070643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 14","termid":"PBO:0070643"}


id: GO:0060482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lobar bronchus from an initial condition to its mature state. This process begins with the formation of the lobar bronchus and ends with the mature structure. The lobar bronchus is the major airway within the respiratory tree that starts by division of the principal bronchi on both sides and ends at the point of its own subdivision into tertiary or segmental bronchi.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchus development","termid":"GO:0060433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lobar bronchus development","termid":"GO:0060482"}


id: FYPO:0002873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in the normal orientation perpendicular the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal septum location","termid":"FYPO:0002253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal septum orientation","synonyms":[{"name":"normal septum orientation during mitotic cell cycle","type":"related"},{"name":"normal septum orientation during vegetative growth","type":"exact"},{"name":"normal septum position","type":"related"}],"termid":"FYPO:0002873"}


id: GO:0035854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a eosinophil cell. A eosinophil is any of the immature or mature forms of a granular leukocyte with a nucleus that usually has two lobes connected by one or more slender threads of chromatin, and cytoplasm containing coarse, round granules that are uniform in size and which can be stained by the dye eosin.","definition_xrefs":["GOC:vk","CL:0000771","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"eosinophil differentiation","termid":"GO:0030222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil fate commitment","synonyms":[{"name":"eosinophil cell fate commitment","type":"exact"}],"termid":"GO:0035854"}


id: MONDO:0859202
data:
  {"annotated_genes":["SJAG_02571"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88072],"is_not":false,"summary":null,"term":"MONDO:0859202"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02571":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay, hypotonia, musculoskeletal defects, and behavioral abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794222","OMIM:619595","UMLS:C5562012"],"termid":"MONDO:0859202","terms_by_termid":{"MONDO:0859202":null},"xrefs":{"Monarch":{"xref_id":"0859202"}}}


id: GO:0017187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase.","definition_xrefs":["RESID:AA0032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"protein carboxylation","termid":"GO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glutamic acid carboxylation","secondary_identifiers":["Reactome:R-HSA-159854"],"termid":"GO:0017187"}


id: GO:0061336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shape change of an epithelial cell from a columnar to squamous cell morphology that contributes to the shaping of the Malpighian tubule.","definition_xrefs":["PMID:19783135","GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell morphogenesis involved in Malpighian tubule morphogenesis","termid":"GO:0061336"}


id: PBO:0083735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of CPF (cleavage and polyadenylation factor); involved in 3' end formation of snoRNA and mRNA; interacts directly with Pta1p; relocalizes to the cytosol in response to hypoxia; similar to mammalian Cleavage-Stimulation Factor CstF-64","termid":"PBO:0083735"}


id: PBO:0072041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 11","termid":"PBO:0072041"}


id: PBO:0050312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 14","termid":"PBO:0050312"}


id: GO:0019609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.","definition_xrefs":["PMID:6995433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-hydroxyphenylacetate metabolic process","synonyms":[{"name":"3-hydroxyphenylacetate metabolism","type":"exact"},{"name":"3HPA metabolic process","type":"exact"},{"name":"3HPA metabolism","type":"exact"}],"termid":"GO:0019609"}


id: MONDO:0007034
data:
  {"annotated_genes":["SJAG_03484","SJAG_04092"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87955,87956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013895"}]},"cv_name":"mondo","definition":"Adams-Oliver Syndrome (AOS) is a rare disorder characterized by the combination of congenital limb abnormalities and scalp defects, often accompanied by skull ossification defects.","definition_xrefs":["Orphanet:974"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mixed dermis disorder","termid":"MONDO:0019294"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03484":null,"SJAG_04092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Adams-Oliver syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:745972142","MESH:C538225","MEDGEN:78544","DOID:0060227","OMIMPS:100300","GARD:5739","UMLS:C0265268","ICD9:759.89","SCTID:34748004"],"synonyms":[{"name":"AOS","type":"exact"},{"name":"Adams Oliver syndrome","type":"exact"},{"name":"congenital scalp defects with distal limb anomalies","type":"exact"},{"name":"congenital scalp defects with distal limb reduction anomalies","type":"exact"},{"name":"limb scalp and skull defects","type":"related"},{"name":"limb, scalp and skull defects","type":"exact"}],"termid":"MONDO:0007034","terms_by_termid":{"MONDO:0013895":null},"xrefs":{"Monarch":{"xref_id":"0007034"}}}


id: GO:0062158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(out) + proton(in) = chloride(in) + proton(out).","definition_xrefs":["PMID:14985752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"chloride:proton antiporter activity","termid":"GO:0062158"}


id: FYPO:0003403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glyoxalase III activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0005447","FYPO:0000002","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal glyoxalase III activity","termid":"FYPO:0003403"}


id: PBO:0053286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM and calponin homology domains 1","termid":"PBO:0053286"}


id: PBO:0058083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4300 host gene","termid":"PBO:0058083"}


id: GO:0010188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a microbial phytotoxin stimulus. A microbial phytotoxin is a chemical substance produced by microbes which is toxic to plants.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to microbial phytotoxin","termid":"GO:0010188"}


id: GO:0008724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the ATP-independent breakage of DNA, followed by passage and rejoining. It also catalyzes the relaxation of supercoiled DNA, and the decatenation and unknotting of DNA in vivo.","definition_xrefs":["PMID:11274059","EC:5.99.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA topoisomerase IV activity (obsolete GO:0008724)","synonyms":[{"name":"DNA topoisomerase IV activity","type":"exact"}],"termid":"GO:0008724"}


id: GO:0047574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-acetamidobutanoyl-CoA + H2O = 4-aminobutanoyl-CoA + acetate.","definition_xrefs":["RHEA:22928","EC:3.5.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0019213","GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-acetamidobutyryl-CoA deacetylase activity","secondary_identifiers":["KEGG_REACTION:R04056","MetaCyc:4-ACETAMIDOBUTYRYL-COA-DEACETYLASE-RXN"],"synonyms":[{"name":"4-acetamidobutanoyl-CoA amidohydrolase activity","type":"related"},{"name":"aminobutyryl-CoA thiolesterase activity","type":"related"},{"name":"deacetylase-thiolesterase activity","type":"related"}],"termid":"GO:0047574"}


id: PBO:0034105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_synology_relationship_with","termid":"PBO:0034105"}


id: PR:000044698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is dimethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00084.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht1/Me(K9)","termid":"PR:000027578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1, initiator methionine removed K9-dimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"Spom-hht1/InitMet-/K9me2","type":"exact"}],"termid":"PR:000044698"}


id: FYPO:0000207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to caffeine is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cellular response to caffeine","synonyms":[{"name":"abnormal cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to caffeine during vegetative growth","type":"exact"}],"termid":"FYPO:0000207"}


id: PBO:0089506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability protein Rmi1","termid":"PBO:0089506"}


id: MONDO:0015207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A esophageal malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic esophageal malformation (obsolete MONDO:0015207)","secondary_identifiers":["Orphanet:108959"],"synonyms":[{"name":"isolated esophageal malformation","type":"exact"},{"name":"nonsyndromic esophageal malformation","type":"exact"}],"termid":"MONDO:0015207","xrefs":{"Monarch":{"xref_id":"0015207"}}}


id: GO:0032817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell activation","termid":"GO:0032814"},{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"regulates","term_name":"natural killer cell proliferation","termid":"GO:0001787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell proliferation","synonyms":[{"name":"regulation of NK cell proliferation","type":"exact"}],"termid":"GO:0032817"}


id: PBO:0086849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulator of the Fps1p glycerol channel; multiply phosphorylated by Hog1p under osmotic stress; contains a pleckstrin homology domain; forms homodimers and heterodimerizes with paralog Ask10p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086849"}


id: GO:0042437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole-3-acetic acid, a compound which functions as a growth regulator in plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid metabolic process","termid":"GO:0009683"},{"relation_name":"is_a","term_name":"auxin catabolic process","termid":"GO:0009852"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"indoleacetic acid catabolic process","synonyms":[{"name":"IAA catabolic process","type":"exact"},{"name":"indole acetic acid catabolic process","type":"exact"},{"name":"indole acetic acid catabolism","type":"exact"},{"name":"indoleacetic acid breakdown","type":"exact"},{"name":"indoleacetic acid catabolism","type":"exact"},{"name":"indoleacetic acid degradation","type":"exact"}],"termid":"GO:0042437"}


id: PBO:0044671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damage specific DNA binding protein 2","termid":"PBO:0044671"}


id: GO:0140969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the lungs with respect to the left and right halves of the organism.","definition_xrefs":["GOC:BHFL","GOC:rl","PMID:21131974","PMID:19944405","PMID:20007846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of lung left/right asymmetry","termid":"GO:0140969"}


id: GO:0033619
data:
  {"annotated_genes":["SJAG_04583"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77805],"is_not":false,"summary":null,"term":"GO:0033619"}]},"cv_name":"biological_process","definition":"The proteolytic cleavage of a transmembrane protein leading to the release of its intracellular or ecto-domains.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane protein proteolysis","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0033619","terms_by_termid":{"GO:0033619":null}}


id: GO:0033600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of mammary gland epithelial cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mammary gland epithelial cell proliferation","termid":"GO:0033599"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"mammary gland epithelial cell proliferation","termid":"GO:0033598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mammary gland epithelial cell proliferation","synonyms":[{"name":"down regulation of mammary gland epithelial cell proliferation","type":"exact"},{"name":"down-regulation of mammary gland epithelial cell proliferation","type":"exact"},{"name":"downregulation of mammary gland epithelial cell proliferation","type":"exact"},{"name":"inhibition of mammary gland epithelial cell proliferation","type":"narrow"}],"termid":"GO:0033600"}


id: GO:0072281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephronin the metanephros. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in metanephric nephron morphogenesis","termid":"GO:0072281"}


id: PR:P40373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.05c","secondary_identifiers":["UniProtKB:P40373"],"synonyms":[{"name":"ATP-PRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-PRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hisG","type":"exact"}],"termid":"PR:P40373"}


id: PR:O14351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An L-xylulose reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C30D10.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.05c","secondary_identifiers":["UniProtKB:O14351"],"synonyms":[{"name":"Spom972h-DCXR","type":"exact"}],"termid":"PR:O14351"}


id: GO:0044716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 8-oxo-GDP + H2O = 8-oxo-GMP + phosphate.","definition_xrefs":["RHEA:62356","GOC:pde","PMID:22556419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"8-oxo-GDP phosphatase activity","secondary_identifiers":["Reactome:R-HSA-2395873"],"termid":"GO:0044716"}


id: GO:0048249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of phosphate from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:8709965","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity phosphate transmembrane transporter activity","synonyms":[{"name":"high affinity phosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0048249"}


id: MONDO:0035313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of inflammatory pseudotumor of the liver characterized by a benign, well-circumscribed tumor with diffuse lymphoplasmacytic infiltration with histological features of IgG4-related disease (numerous IgG4-positive plasma cells, prominent eosinophils, stromal fibrosis, fibroblastic proliferations and, frequently, obliterative phlebitis), and that is likely located around the hepatic hilum. Most often it is discovered as an incidental finding.","definition_xrefs":["Orphanet:555437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"lymphoplasmacytic inflammatory pseudotumor of the liver","secondary_identifiers":["GARD:22240","ICD10CM:K75.8","UMLS:C5680170","MEDGEN:1843135"],"synonyms":[{"name":"IgG4-related inflammatory pseudotumor of the liver","type":"exact"}],"termid":"MONDO:0035313","xrefs":{"Monarch":{"xref_id":"0035313"}}}


id: MONDO:0015186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare intestinal neoplasm.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of intestine (obsolete MONDO:0015186)","secondary_identifiers":["Orphanet:104011"],"synonyms":[{"name":"rare intestinal neoplasm","type":"exact"},{"name":"rare intestinal tumor","type":"exact"},{"name":"rare tumor of bowel","type":"exact"}],"termid":"MONDO:0015186","xrefs":{"Monarch":{"xref_id":"0015186"}}}


id: PBO:0044469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 7 subfamily B member 1","termid":"PBO:0044469"}


id: PBO:0054081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1431","termid":"PBO:0054081"}


id: GO:2000693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of seed maturation","termid":"GO:2000034"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed maturation","termid":"GO:2000693"}


id: GO:0070123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with transforming growth factor beta to initiate a change in cell activity; facilitates ligand binding to type I and type II TGF-beta receptors.","definition_xrefs":["GOC:mah","PMID:9759503","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor activity","termid":"GO:0005024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0038023","GO:0016301","GO:0004672","GO:0003824","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"transforming growth factor beta receptor activity, type III","synonyms":[{"name":"betaglycan","type":"narrow"},{"name":"endoglin","type":"narrow"},{"name":"transforming growth factor beta ligand binding to type III receptor","type":"related"},{"name":"type III TGF-beta receptor activity","type":"exact"},{"name":"type III TGFbeta receptor activity","type":"exact"},{"name":"type III transforming growth factor beta receptor activity","type":"exact"}],"termid":"GO:0070123"}


id: GO:0051861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic group such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate.","definition_xrefs":["PMID:19635802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"glycolipid binding","termid":"GO:0051861"}


id: PBO:0080943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygote arrest 1 like","termid":"PBO:0080943"}


id: GO:0047099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD(P)+ + CDP-4-dehydro-3,6-dideoxy-D-glucose = NAD(P)H + CDP-4-dehydro-6-deoxy-D-glucose.","definition_xrefs":["EC:1.17.1.1","MetaCyc:1.17.1.1-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"CDP-4-dehydro-6-deoxyglucose reductase activity","synonyms":[{"name":"CDP-4-dehydro-3,6-dideoxy-D-glucose:NAD(P)+ 3-oxidoreductase activity","type":"related"},{"name":"CDP-4-keto-6-deoxy-D-glucose-3-dehydrogenase system activity","type":"related"},{"name":"CDP-4-keto-6-deoxyglucose reductase activity","type":"related"},{"name":"CDP-4-keto-deoxy-glucose reductase activity","type":"related"},{"name":"NAD(P)H:CDP-4-keto-6-deoxy-D-glucose oxidoreductase activity","type":"related"},{"name":"cytidine diphosphate 4-keto-6-deoxy-D-glucose-3-dehydrogenase activity","type":"related"},{"name":"cytidine diphospho-4-keto-6-deoxy-D-glucose reductase activity","type":"related"}],"termid":"GO:0047099"}


id: FYPO:0002241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid, has one or more septa, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"},{"relation_name":"is_a","term_name":"septated spheroid vegetative cell","termid":"FYPO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000005","FYPO:0001312","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"normal volume septated spheroid vegetative cell","synonyms":[{"name":"normal volume septated rounded vegetative cell","type":"exact"}],"termid":"FYPO:0002241"}


id: GO:0043149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a stress fiber. A stress fiber is a contractile actin filament bundle that consists of short actin filaments with alternating polarity.","definition_xrefs":["GOC:go_curators","GOC:mah","PMID:16651381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile actin filament bundle assembly","termid":"GO:0030038"},{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"stress fiber assembly","synonyms":[{"name":"actin cable assembly","type":"related"},{"name":"actin cable formation","type":"related"},{"name":"stress fibre biosynthesis","type":"related"},{"name":"stress fibre formation","type":"related"}],"termid":"GO:0043149"}


id: PBO:0084655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor sphingoid long-chain base kinase; possibly involved in synthesis of long-chain base phosphates, which function as signaling molecules; LCB5 has a paralog, LCB4, that arose from the whole genome duplication","termid":"PBO:0084655"}


id: MOD:01152
data:
  {"annotated_genes":["SJAG_00464","SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82444,82392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00123"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a carboxylic acid group.","definition_xrefs":["Unimod:299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00464":null,"SJAG_02766":null},"genotype_count":0,"is_obsolete":false,"name":"carboxylated residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"}],"termid":"MOD:01152","terms_by_termid":{"MOD:00123":null}}


id: PBO:0069477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 744, pseudogene","termid":"PBO:0069477"}


id: GO:1904287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein-pyridoxal-5-phosphate linkage.","definition_xrefs":["PMID:25957689","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein-pyridoxal-5-phosphate linkage","termid":"GO:1904285"},{"relation_name":"positively_regulates","term_name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein-pyridoxal-5-phosphate linkage","synonyms":[{"name":"activation of protein-pyridoxal-5-phosphate linkage","type":"narrow"},{"name":"stimulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"up regulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"up-regulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"upregulation of protein-pyridoxal-5-phosphate linkage","type":"exact"}],"termid":"GO:1904287"}


id: MONDO:0013034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any striate palmoplantar keratoderma in which the cause of the disease is a mutation in the DSP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striate palmoplantar keratoderma","termid":"MONDO:0018865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis palmoplantaris striata 2","secondary_identifiers":["MESH:C565102","DOID:0081109","MEDGEN:343725","OMIM:612908","UMLS:C1852127","GARD:15590"],"synonyms":[{"name":"DSP striate palmoplantar keratoderma","type":"exact"},{"name":"PPKS2","type":"related"},{"name":"keratoderma, palmoplantar, striate form 2","type":"related"},{"name":"keratosis palmoplantaris striata II","type":"related"},{"name":"keratosis palmoplantaris striata type 2","type":"exact"},{"name":"striate palmoplantar keratoderma 2","type":"related"},{"name":"striate palmoplantar keratoderma caused by mutation in DSP","type":"exact"}],"termid":"MONDO:0013034","xrefs":{"Monarch":{"xref_id":"0013034"}}}


id: PBO:0053387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 314","termid":"PBO:0053387"}


id: PBO:0056333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 14","termid":"PBO:0056333"}


id: PBO:0062382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 11 pseudogene","termid":"PBO:0062382"}


id: SO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repetitive element, a few hundred base pairs long, that is dispersed throughout the genome. A common human SINE is the Alu element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_LTR_retrotransposon","termid":"SO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SINE_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Short_interspersed_nuclear_element"],"synonyms":[{"name":"SINE element","type":"exact"},{"name":"Short interspersed element","type":"exact"},{"name":"Short interspersed nuclear element","type":"exact"}],"termid":"SO:0000206"}


id: PBO:0069086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 333, pseudogene","termid":"PBO:0069086"}


id: GO:0140853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + glycyl-L-cysteinyl-[protein] + H+ = [protein]-C-terminal glycyl cholesterol ester + N-terminal L-cysteinyl-[protein].","definition_xrefs":["RHEA:59504","PMID:8824192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"cholesterol-protein transferase activity","synonyms":[{"name":"cholesterol transferase activity","type":"broad"}],"termid":"GO:0140853"}


id: GO:0035550
data:
  {"annotated_genes":["SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59473],"is_not":false,"summary":null,"term":"GO:0035550"}]},"cv_name":"cellular_component","definition":"A multiprotein nickel-containing complex that possesses urease activity (catalysis of the hydrolysis of urea to ammonia and carbon dioxide).","definition_xrefs":["InterPro:IPR008221","PMID:2651866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"urease complex","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0035550","terms_by_termid":{"GO:0035550":null}}


id: PR:000030008
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase BRSK2 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inducer protein kinase cdr2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC57A10.02","synonyms":[{"name":"SPAC57A10.02","type":"related"},{"name":"Spom-BRSK2","type":"exact"}],"termid":"PR:000030008"}


id: GO:0043846
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heptamer that includes the tau and gamma products of the dnaX gene and the chi/psi subcomplex. Confers structural asymmetry that allows the polymerase to replicate both leading and lagging strands.","definition_xrefs":["PMID:12940977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"DNA polymerase III complex","termid":"GO:0009360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA polymerase III, clamp loader complex","synonyms":[{"name":"DNA polymerase III, DnaX complex","type":"exact"},{"name":"DNA polymerase III, DnaX subcomplex","type":"exact"},{"name":"clamp loader complex","type":"broad"}],"termid":"GO:0043846"}


id: PBO:0036299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom6 (predicted)","termid":"PBO:0036299"}


id: PBO:0080296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 60 pseudogene","termid":"PBO:0080296"}


id: PBO:0030270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_negative_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0030270"}


id: PBO:0002930
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.14.10","termid":"PBO:0002930"}


id: PBO:0053112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase 2","termid":"PBO:0053112"}


id: GO:0140469
data:
  {"annotated_genes":["SJAG_04873","SJAG_02072","SJAG_05000","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71706,82148,101316,111621],"is_not":false,"summary":null,"term":"GO:0140469"}]},"cv_name":"biological_process","definition":"A series of reactions in which a signal is passed on to downstream proteins within the cell via GCN2 (also known as EIF2AK4), an intracellular protein kinase that is activated by stress signals, such as amino acid starvation.","definition_xrefs":["PMID:27629041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_02072":null,"SJAG_04873":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"GCN2-mediated signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0060733"],"synonyms":[{"name":"EIF2AK4-mediated signaling","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by amino acid starvation","type":"narrow"}],"termid":"GO:0140469","terms_by_termid":{"GO:0140469":null}}


id: GO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth or movement in a sessile organism toward or away from water, as of the roots of a plant.","definition_xrefs":["ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrotropism","secondary_identifiers":["Wikipedia:Hydrotropism"],"termid":"GO:0010274"}


id: FYPO:0005681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers, occurs to a lesser extent than normal.","definition_xrefs":["GO:0046785","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule polymerization or depolymerization","termid":"FYPO:0000904"},{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"decreased microtubule polymerization","synonyms":[{"name":"decreased microtubule growth","type":"exact"},{"name":"decreased microtubule polymerisation","type":"exact"},{"name":"decreased microtubule polymerization","type":"related"},{"name":"decreased microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"decreased microtubule polymerization during vegetative growth","type":"exact"},{"name":"reduced microtubule polymerization","type":"exact"}],"termid":"FYPO:0005681"}


id: PBO:0064193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 1","termid":"PBO:0064193"}


id: PBO:0016998
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CAT5","termid":"PBO:0016998"}


id: PBO:0047598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FH2 domain containing 1","termid":"PBO:0047598"}


id: GO:0019790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-like hydrolase activity (obsolete GO:0019790)","synonyms":[{"name":"ubiquitin-like hydrolase activity","type":"exact"}],"termid":"GO:0019790"}


id: PBO:0082109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetate transporter required for normal sporulation; phosphorylated in mitochondria; ADY2 has a paralog, ATO2, that arose from the whole genome duplication","termid":"PBO:0082109"}


id: SO:0000856
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is similar or identical across more than one species.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved","termid":"SO:0000856"}


id: MONDO:0023134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Febrile ulceronecrotic Mucha-Habermann disease (FUMHD) is a rare and severe form of pityriasis lichenoides et varioliformis acuta (PLEVA). PLEVA is characterized by skin lesions that ulcerate, breakdown, form open sores, then form a red-brown crust. FUMHD often begins as PLEVA, but then rapidly and suddenly progresses to large, destructive ulcers. There may be fever and extensive, painful loss of skin tissue as well as secondary infection of the ulcers. Diagnosis of FUMHD is confirmed by biopsy of skin lesions. FUMHD occurs more frequently in children, peaking at age 5 to 10. Males tend to be affected more often than females. While some cases of FUMHD have resolved without therapy, others have resulted in death. Early diagnosis and prompt treatment may help to reduce morbidity and death.","definition_xrefs":["GARD:0009516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lichenoid pityriasis","termid":"MONDO:0024250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"febrile ulceronecrotic Mucha-Habermann disease","secondary_identifiers":["GARD:9516","MESH:C537077","UMLS:C1274297","SCTID:402860008","MEDGEN:266145","icd11.foundation:1408299147"],"synonyms":[{"name":"A severe variant of pityriasis lichenoides et varioliformis acuta (PLEVA)","type":"related"},{"name":"FUMHD","type":"related"},{"name":"febrile ulceronecrotic Mucha-Habermann disease","type":"exact"},{"name":"febrile ulceronecrotic pityriasis lichenoides acuta","type":"exact"},{"name":"ulceronecrotic Mucha-Habermann disease","type":"related"},{"name":"variant of Mucha-Habermann disease","type":"related"}],"termid":"MONDO:0023134","xrefs":{"Monarch":{"xref_id":"0023134"}}}


id: PBO:0091805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ClC chloride channel","termid":"PBO:0091805"}


id: PBO:0082559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ceramide synthase component; involved in synthesis of ceramide from C26(acyl)-coenzyme A and dihydrosphingosine or phytosphingosine, functionally equivalent to Lac1p; forms ER foci upon DNA replication stress; homolog of human CERS2, a tumor metastasis suppressor gene whose silencing enhances invasion/metastasis of prostate cancer cells; LAG1 has a paralog, LAC1, that arose from the whole genome duplication","termid":"PBO:0082559"}


id: PBO:0077494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 213","termid":"PBO:0077494"}


id: GO:0052915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine(2445) in 23S rRNA = N(2)-methylguanosine(2445) in 23S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N2-)-methyltransferase activity","termid":"GO:0008990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"23S rRNA (guanine(2445)-N(2))-methyltransferase activity","secondary_identifiers":["RHEA:42740","MetaCyc:RXN-11574"],"termid":"GO:0052915"}


id: SO:0001266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a small noncoding RNA that is generally found only in the cytoplasm.","direct_ancestors":[{"relation_name":"has_quality","term_name":"scRNA_encoding","termid":"SO:0000575"},{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scRNA_gene","synonyms":[{"name":"scRNA gene","type":"exact"}],"termid":"SO:0001266"}


id: PR:O94559
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C4.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C4.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.05c","synonyms":[{"name":"Spom972h-SPAC23C4.05c","type":"exact"}],"termid":"PR:O94559"}


id: PBO:0038907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E2","termid":"PBO:0038907"}


id: MONDO:0022823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital contractures","secondary_identifiers":["MEDGEN:83066","UMLS:C0332878"],"termid":"MONDO:0022823","xrefs":{"Monarch":{"xref_id":"0022823"}}}


id: PR:Q9P7Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase copper chaperone that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR16719:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.14c","secondary_identifiers":["UniProtKB:Q9P7Z7"],"synonyms":[{"name":"SPBC26H8.14c","type":"related"},{"name":"Spom972h-COX17","type":"exact"}],"termid":"PR:Q9P7Z7"}


id: PBO:0056234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI2 antisense RNA 1","termid":"PBO:0056234"}


id: PR:O94566
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug184 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 184 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.09c","synonyms":[{"name":"Spom972h-mug184","type":"exact"}],"termid":"PR:O94566"}


id: MONDO:0004847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract with no obvious cause occurring in persons over 50 years old.","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"senile cataract","secondary_identifiers":["UMLS:C0036646","ICD9:366.1","DOID:9669","ICD9:366.10","MEDGEN:11372","NCIT:C35012","SCTID:39450006"],"termid":"MONDO:0004847","xrefs":{"Monarch":{"xref_id":"0004847"}}}


id: FYPO:0008279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-diphospho-1D-myo-inositol 2,3,4,5,6-pentakisphosphate (1-IP7) is higher than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular myo-inositol level","termid":"FYPO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular 1-IP7 level","termid":"FYPO:0008279"}


id: FYPO:0000686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","termid":"FYPO:0000686"}


id: PBO:0061664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 42","termid":"PBO:0061664"}


id: PR:Q09706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pld1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.16c","synonyms":[{"name":"PLD 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pld1","type":"exact"},{"name":"choline phosphatase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphatidylcholine-hydrolyzing phospholipase D1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09706"}


id: PATO:0000645
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A decreased size quality inhering in a bearer by virtue of the bearer's exhibiting reduced number of cells within an organ or tissue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"aplastic/hypoplastic","termid":"PATO:0002290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoplastic","secondary_identifiers":["PATO:0000942"],"synonyms":[{"name":"hypoplasia","type":"exact"},{"name":"underdeveloped","type":"related"}],"termid":"PATO:0000645"}


id: GO:0071848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any TNFSF11-mediated signaling process that increases the rate, frequency, or extent of the ERK1 and ERK2 cascade.","definition_xrefs":["PMID:18606301","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signaling (obsolete GO:0071848)","synonyms":[{"name":"positive regulation of ERK1 and ERK2 cascade via RANKL-mediated signaling","type":"exact"},{"name":"positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signalling","type":"exact"}],"termid":"GO:0071848"}


id: GO:0051791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a medium-chain fatty acid. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["Wikipedia:Fatty_acid_metabolisms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"medium-chain fatty acid metabolic process","synonyms":[{"name":"medium chain fatty acid metabolic process","type":"exact"},{"name":"medium chain fatty acid metabolism","type":"exact"},{"name":"medium-chain fatty acid metabolism","type":"exact"}],"termid":"GO:0051791"}


id: PBO:0036097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0036097"}


id: MOD:00140
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phycocyanobilin.","definition_xrefs":["PubMed:16644722","PubMed:3208761","Unimod:387#C","RESID:AA0131","ChEBI:15617","PubMed:3838747","PubMed:7918400","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-phycocyanobilin-L-cysteine","synonyms":[{"name":"(2R,3R)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-18-ethyl-1,2,3,19,21,22,24-heptahydro-2,7,13,17-tetramethyl-1,19-dioxo-(21H,22H,24H)-bilin-8,12-dipropanoic acid","type":"exact"},{"name":"(2R,3R)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-18-ethyl-2,7,13,17-tetramethyl-1,2,3,19,21,22,24-heptahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"BINDING Phycocyanobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"PCB","type":"exact"},{"name":"Phycocyanobilin","type":"related"},{"name":"S-Phycocyanobilin (on Cysteine)","type":"exact"},{"name":"S-phycocyanobilin-L-cysteine","type":"exact"},{"name":"phycobilin cysteine","type":"exact"},{"name":"phycocyanobilin","type":"related"},{"name":"phycocyanobilin cysteine adduct","type":"exact"}],"termid":"MOD:00140"}


id: PBO:0081633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF561 antisense RNA 1 (head to head)","termid":"PBO:0081633"}


id: GO:1905119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a haloperidol stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:24751813","GOC:dw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to haloperidol","termid":"GO:1905119"}


id: MONDO:0010676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, Hemizygous lethal type","secondary_identifiers":["UMLS:C1839671","MEDGEN:326552","OMIM:309950","MESH:C564097"],"synonyms":[{"name":"muscular dystrophy, Hemizygous lethal type","type":"exact"}],"termid":"MONDO:0010676","xrefs":{"Monarch":{"xref_id":"0010676"}}}


id: GO:1900020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein kinase C activity.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"},{"relation_name":"is_a","term_name":"regulation of protein kinase C activity","termid":"GO:1900019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein kinase C activity","synonyms":[{"name":"positive regulation of PKC","type":"related"},{"name":"positive regulation of PKC activity","type":"exact"},{"name":"up regulation of PKC","type":"related"},{"name":"up regulation of PKC activity","type":"exact"}],"termid":"GO:1900020"}


id: MONDO:0009277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of congenital glaucoma caused by mutation(s) in the CYP1B1 gene, encoding cytochrome P450 1B1.","definition_xrefs":["NCIT:C148260"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete hydrophthalmos (obsolete MONDO:0006788)","termid":"MONDO:0006788"},{"relation_name":"is_a","term_name":"CYP1B1-related glaucoma with or without anterior segment dysgenesis","termid":"MONDO:0800472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3A","secondary_identifiers":["DOID:11211","MEDGEN:383912","Orphanet:98976","OMIM:231300","UMLS:C1856439","GARD:18224","ICD9:743.21"],"synonyms":[{"name":"GLC3A","type":"related"},{"name":"Primary Congenital glaucoma 3A","type":"exact"},{"name":"buphthalmos","type":"broad"},{"name":"glaucoma 3, primary congenital, A","type":"related"},{"name":"glaucoma 3, primary congenital, type a","type":"exact"},{"name":"glaucoma 3A, primary open angle, congenital, juvenile, or adult onset","type":"exact"},{"name":"glaucoma, congenital","type":"related"},{"name":"glaucoma, primary open angle, adult-onset","type":"related"},{"name":"glaucoma, primary open angle, juvenile-onset","type":"related"},{"name":"simple buphthalmos","type":"exact"}],"termid":"MONDO:0009277","xrefs":{"Monarch":{"xref_id":"0009277"}}}


id: MONDO:0014082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cryptosporidiosis-chronic cholangitis-liver disease syndrome","secondary_identifiers":["GARD:17550","MEDGEN:767601","DOID:0111982","Orphanet:357329","UMLS:C3554687","OMIM:615207"],"synonyms":[{"name":"IL21R immunodeficiency","type":"related"},{"name":"IMD56","type":"related"},{"name":"cryptosporidiosis-chronic cholangitis-liver disease syndrome","type":"exact"},{"name":"immunodeficiency 56","type":"related"}],"termid":"MONDO:0014082","xrefs":{"Monarch":{"xref_id":"0014082"}}}


id: PBO:0072866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAS-6 centriolar assembly protein","termid":"PBO:0072866"}


id: MONDO:0009617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the MCPH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"},{"relation_name":"is_a","term_name":"microcephaly with intellectual disability","termid":"MONDO:0100200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 1, primary, autosomal recessive","secondary_identifiers":["OMIM:251200","Orphanet:52183","MESH:C565384","UMLS:C1855081","MEDGEN:344415","DOID:0070285","GARD:15198"],"synonyms":[{"name":"MCPH1","type":"related"},{"name":"MCPH1 autosomal recessive primary microcephaly","type":"exact"},{"name":"PCC syndrome","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in MCPH1","type":"exact"},{"name":"microcephaly 1, primary, autosomal recessive","type":"exact"},{"name":"premature chromosome condensation syndrome","type":"related"},{"name":"premature chromosome condensation with microcephaly and intellectual disability","type":"related"},{"name":"premature chromosome condensation with microcephaly and mental retardation","type":"related"}],"termid":"MONDO:0009617","xrefs":{"Monarch":{"xref_id":"0009617"}}}


id: PR:Q9HGQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.02 gene.","definition_xrefs":["UniProtKB:Q9HGQ0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C212.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.02","synonyms":[{"name":"Spom972h-SPAC212.02","type":"exact"}],"termid":"PR:Q9HGQ0"}


id: PBO:0053991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1310","termid":"PBO:0053991"}


id: GO:1903537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any meiotic cell cycle process that is involved in oocyte maturation.","definition_xrefs":["GOC:jz","GO_REF:0000060","PMID:25212395","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"oocyte maturation","termid":"GO:0001556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic cell cycle process involved in oocyte maturation","synonyms":[{"name":"meiosis involved in oocyte maturation","type":"broad"}],"termid":"GO:1903537"}


id: PBO:0082995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic leucyl tRNA synthetase; ligates leucine to the appropriate tRNA; human homolog LARS can complement yeast temperature-sensitive mutant at restrictive temperature","termid":"PBO:0082995"}


id: GO:1902944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any aspartic-type endopeptidase activity that is involved in amyloid precursor protein catabolic process.","definition_xrefs":["GO_REF:0000061","GOC:sjp","PMID:10206644","PMID:24577224","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartic-type endopeptidase activity","termid":"GO:0004190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0008233","GO:0016787"],"is_obsolete":false,"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"aspartate protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartate protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"aspartic protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartic protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"aspartyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartyl protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"carboxyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"carboxyl protease activity involved in APP catabolism","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein degradation","type":"narrow"}],"termid":"GO:1902944"}


id: GO:0045519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-23 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-23 receptor binding","synonyms":[{"name":"IL-23","type":"narrow"},{"name":"interleukin-23 receptor ligand","type":"narrow"}],"termid":"GO:0045519"}


id: GO:0039643
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a host cell that contains the viral genome.","definition_xrefs":["GOC:bf","GOC:jl","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell viral nucleoid","termid":"GO:0039643"}


id: GO:0051853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an associated organism causes the formation of an abnormal mass of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction in symbiont of tumor, nodule, or growth (obsolete GO:0051853)","synonyms":[{"name":"induction in symbiont of tumor, nodule, or growth","type":"exact"}],"termid":"GO:0051853"}


id: GO:1990592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ufmylation process in which a polymer of the ubiquitin-like protein UFM1 is formed by linkages between lysine residues at position 69 of the UFM1 monomers, is added to a protein.","definition_xrefs":["PMID:25219498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyufmylation","termid":"GO:1990564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K69-linked ufmylation","termid":"GO:1990592"}


id: GO:0045508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-26 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-26 receptor activity","synonyms":[{"name":"IL-26 receptor activity","type":"exact"},{"name":"IL-26R","type":"exact"}],"termid":"GO:0045508"}


id: GO:0031735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR10 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CCR10 chemokine receptor binding","synonyms":[{"name":"CCR10 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031735"}


id: PBO:0119280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tfexplorer_chipseq_identifier","termid":"PBO:0119280"}


id: FYPO:0009110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is normal after short incubation in hydroxyurea.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal vegetative cell population growth after short incubation in hydroxyurea","secondary_identifiers":["PMID:37200372"],"synonyms":[{"name":"normal vegetative cell population growth after acute hydroxyurea treatment","type":"exact"}],"termid":"FYPO:0009110"}


id: PBO:0083767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential non-ATPase regulatory subunit of the 26S proteasome; has similarity to the human p40 proteasomal subunit and to another S. cerevisiae regulatory subunit, Rpn11p","termid":"PBO:0083767"}


id: PBO:0086533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; overlaps ORF YEL010W","termid":"PBO:0086533"}


id: PBO:0066494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 5","termid":"PBO:0066494"}


id: MONDO:0018306
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88839,88840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008962"}]},"cv_name":"mondo","definition":"Griscelli syndrome (GS) is characterized by silvery gray sheen of the hair and hypopigmentation of the skin which can be associated to neurological impairment (type 1), immunodeficiency (type 2) or be isolated (type 3).","definition_xrefs":["Orphanet:381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic oculocutaneous albinism","termid":"MONDO:0017305"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"Griscelli syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10913","ICD9:270.2","UMLS:C0398794","ICD10CM:E70.3","OMIMPS:214450","SCTID:37548006","MEDGEN:585090","NANDO:1200640","DOID:0060831"],"synonyms":[{"name":"ChC)diak-Higashi-like syndrome","type":"exact"},{"name":"Chédiak-Higashi-like syndrome","type":"exact"},{"name":"Ch��diak-Higashi-like syndrome","type":"exact"},{"name":"Griscelli disease","type":"related"},{"name":"Griscelli-PruniC)ras syndrome","type":"exact"},{"name":"Griscelli-Pruniéras syndrome","type":"exact"},{"name":"Griscelli-Pruni��ras syndrome","type":"exact"},{"name":"partial albinism-immunodeficiency syndrome","type":"exact"}],"termid":"MONDO:0018306","terms_by_termid":{"MONDO:0008962":null},"xrefs":{"Monarch":{"xref_id":"0018306"}}}


id: PBO:0079353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1a","termid":"PBO:0079353"}


id: GO:0047304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2-aminoethyl)phosphonate + pyruvate = L-alanine + phosphonoacetaldehyde.","definition_xrefs":["RHEA:17021","EC:2.6.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"2-aminoethylphosphonate-pyruvate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.37-RXN","KEGG_REACTION:R04152"],"synonyms":[{"name":"(2-aminoethyl)phosphonate aminotransferase activity","type":"related"},{"name":"(2-aminoethyl)phosphonate transaminase activity","type":"related"},{"name":"(2-aminoethyl)phosphonate--pyruvate aminotransferase activity","type":"related"},{"name":"(2-aminoethyl)phosphonate:pyruvate aminotransferase activity","type":"related"},{"name":"(2-aminoethyl)phosphonic acid aminotransferase activity","type":"related"},{"name":"2-aminoethylphosphonate aminotransferase activity","type":"related"},{"name":"2-aminoethylphosphonate--pyruvate aminotransferase activity","type":"related"},{"name":"2-aminoethylphosphonate-pyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047304"}


id: PBO:0063823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH domain and leucine rich repeat protein phosphatase 2","termid":"PBO:0063823"}


id: GO:0011000
data:
  {"annotated_genes":["SJAG_04671","SJAG_02724","SJAG_03097","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101239,105129,108563,110456],"is_not":false,"summary":null,"term":"GO:0011000"}]},"cv_name":"biological_process","definition":"A process that impedes the progress of the DNA replication fork at natural replication fork pausing sites within the mating type locus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork arrest","termid":"GO:0043111"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02724":null,"SJAG_03097":null,"SJAG_03997":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"replication fork arrest at mating type locus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0011000","terms_by_termid":{"GO:0011000":null}}


id: GO:1901956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde dense core granule transport.","definition_xrefs":["GOC:TermGenie","PMID:23358451","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"regulation of retrograde dense core granule transport","termid":"GO:1901954"},{"relation_name":"is_a","term_name":"positive regulation of dense core granule transport","termid":"GO:1904811"},{"relation_name":"is_a","term_name":"positive regulation of retrograde axon cargo transport","termid":"GO:2001019"},{"relation_name":"positively_regulates","term_name":"retrograde neuronal dense core vesicle transport","termid":"GO:1990049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of retrograde dense core granule transport","synonyms":[{"name":"activation of retrograde dense core granule transport","type":"narrow"},{"name":"up regulation of retrograde dense core granule transport","type":"exact"},{"name":"up-regulation of retrograde dense core granule transport","type":"exact"},{"name":"upregulation of retrograde dense core granule transport","type":"exact"}],"termid":"GO:1901956"}


id: GO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein complex assembly process that contributes to protein import into the nucleus, and that results in the association of a cargo protein, a carrier protein such as an importin alpha/beta heterodimer, and a nucleoporin located at the periphery of the nuclear pore complex.","definition_xrefs":["PMID:7878057","GOC:mah","GOC:isa_complete","PMID:14570049","PMID:9126736"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into nucleus, docking (obsolete GO:0000059)","synonyms":[{"name":"protein docking during protein import into nucleus","type":"exact"},{"name":"protein docking during protein transport from cytoplasm to nucleus","type":"exact"},{"name":"protein docking during protein-nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus, docking","type":"exact"},{"name":"protein-nucleus import, docking","type":"exact"}],"termid":"GO:0000059"}


id: PATO:0002397
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A circular shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, circular.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subcircular","synonyms":[{"name":"round","type":"related"},{"name":"rounded","type":"related"}],"termid":"PATO:0002397"}


id: PBO:0043893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1","termid":"PBO:0043893"}


id: MONDO:0017498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital absence of both forearm and hand, unilateral is a rare developmental defect during embryogenesis characterized by a unilateral, transverse absence of the radius and ulna (of varying terminal lengths), as well as all the elements composing the hand. Left or right side may be involved.","definition_xrefs":["Orphanet:295093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital absence of both forearm and hand","termid":"MONDO:0017443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both forearm and hand, unilateral","secondary_identifiers":["icd11.foundation:2019491585"],"synonyms":[{"name":"radio-ulnar terminal transverse meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017498","xrefs":{"Monarch":{"xref_id":"0017498"}}}


id: PBO:0113180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kynurenine 3-monooxygenase; required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p; localizes to mitochondria and peroxisomes; putative therapeutic target for Huntington disease","termid":"PBO:0113180"}


id: FYPO:0000737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle assembly","termid":"FYPO:0000119"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abnormal meiotic spindle assembly","synonyms":[{"name":"abnormal spindle assembly involved in meiosis","type":"exact"}],"termid":"FYPO:0000737"}


id: GO:1900484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to vacuolar membrane.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein targeting to membrane","termid":"GO:0090315"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuolar membrane","termid":"GO:1900483"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"negatively_regulates","term_name":"protein targeting to vacuolar membrane","termid":"GO:0044395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006605","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein targeting to vacuolar membrane","synonyms":[{"name":"down regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"down-regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"downregulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"inhibition of protein targeting to vacuolar membrane","type":"narrow"}],"termid":"GO:1900484"}


id: MONDO:1010983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in yellow-crowned parrot.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, yellow-crowned parrot","secondary_identifiers":["OMIA:000487-151761"],"termid":"MONDO:1010983","xrefs":{"Monarch":{"xref_id":"1010983"}}}


id: PATO:0002529
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete profound intensity (obsolete PATO:0002529)","termid":"PATO:0002529"}


id: PR:P40976
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-aminoadipate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP7G5.04c","synonyms":[{"name":"L-aminoadipate-semialdehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys1","type":"exact"},{"name":"alpha-AR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-aminoadipate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40976"}


id: MONDO:0020133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","termid":"MONDO:0015219"}],"gene_count":0,"genotype_count":0,"name":"obsolete posterior fossa malformation (obsolete MONDO:0020133)","secondary_identifiers":["Orphanet:98519"],"termid":"MONDO:0020133","xrefs":{"Monarch":{"xref_id":"0020133"}}}


id: GO:0036132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 15-keto-prostaglandin + NAD(P)H + H+ -> 13,14-dihydro-15-keto-prostaglandin + NAD(P)+. This reaction is the reduction of 15-keto-prostaglandin.","definition_xrefs":["GOC:mw","PMID:17449869"],"gene_count":0,"genotype_count":0,"name":"obsolete 13-prostaglandin reductase activity (obsolete GO:0036132)","synonyms":[{"name":"15-oxoprostaglandin 13-reductase activity","type":"exact"}],"termid":"GO:0036132"}


id: PBO:0078261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon ACA) 1-1","termid":"PBO:0078261"}


id: GO:0039023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pronephric duct are generated and organized. The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the kidney.","definition_xrefs":["XAO:0000063","GOC:mtg_kidney_jan10","ZFA:0000150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephric duct morphogenesis","termid":"GO:0072178"},{"relation_name":"part_of","term_name":"pronephric duct development","termid":"GO:0039022"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric duct morphogenesis","termid":"GO:0039023"}


id: GO:1903653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts cell motility in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GO_REF:0000063","GOC:TermGenie","PMID:25049409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell motility","synonyms":[{"name":"modulation by symbiont of host cell locomotion","type":"exact"},{"name":"modulation by symbiont of host cell motility","type":"exact"},{"name":"modulation by symbiont of host cell movement","type":"related"},{"name":"regulation by symbiont of host cell motility","type":"exact"}],"termid":"GO:1903653"}


id: PBO:0029445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-ammonia_ligase_activity","termid":"PBO:0029445"}


id: GO:0070648
data:
  {"annotated_genes":["SJAG_00938","SJAG_04887","SJAG_02864"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100157,110064,121625],"is_not":false,"summary":null,"term":"GO:0070648"}]},"cv_name":"cellular_component","definition":"An actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins. In fungal cells, myosin motors transport cargo along actin cables toward sites of polarized cell growth; actin cables may play a similar role in pollen tube growth.","definition_xrefs":["PMID:14671023","PMID:16959963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallel actin filament bundle","termid":"GO:0097518"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"formin-nucleated actin cable","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"termid":"GO:0070648","terms_by_termid":{"GO:0070648":null}}


id: MONDO:0019605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of very rare glomerular diseases, composed of immunotactoid glomerulopathy (ITG) and non-amyloid fibrillary glomerulopathy (non-amyloid FGP), that are characterized by mesangial deposition of monoclonal microtubular or polyclonal fibrillar deposits. Both present clinically with nephrotic range proteinuria, hematuria and renal insufficiency leading to renal failure in many cases. ITG is more likely to manifest with underlying lymphoproliferative disease, hypocomplementemia, dysproteinemia, monoclonal gammopathy or occult cryoglobulinemia. Non-amyloid FGP is 10 times more frequent than ITG.","definition_xrefs":["Orphanet:91137"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"glomerular disorder","termid":"MONDO:0019722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"immunotactoid or fibrillary glomerulopathy","secondary_identifiers":["GARD:12741","UMLS:C5680195","MEDGEN:1842578"],"synonyms":[{"name":"Immunotactoid or fibrillary glomerulonephritis","type":"exact"},{"name":"fibrillary glomerulonephritis and immunotactoid glomerulopathy","type":"related"}],"termid":"MONDO:0019605","xrefs":{"Monarch":{"xref_id":"0019605"}}}


id: MONDO:0015124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare adrenal disease (obsolete MONDO:0015124)","secondary_identifiers":["Orphanet:101954"],"termid":"MONDO:0015124","xrefs":{"Monarch":{"xref_id":"0015124"}}}


id: GO:1990928
data:
  {"annotated_genes":["SJAG_02424","SJAG_02389","SJAG_04873","SJAG_02026","SJAG_00209","SJAG_00169","SJAG_02292","SJAG_01184","SJAG_02973","SJAG_02331"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73887,77668,75407,62840,97085,96534,75753,73276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[71088,68093],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903833"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of amino acids.","definition_xrefs":["PMID:7765311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_01184":null,"SJAG_02026":null,"SJAG_02292":null,"SJAG_02331":null,"SJAG_02389":null,"SJAG_02424":null,"SJAG_02973":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amino acid starvation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:1990928","terms_by_termid":{"GO:0034198":null,"GO:1903833":null}}


id: GO:0080044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to the 7-hydroxy group of a quercetin molecule.","definition_xrefs":["PMID:15352060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"quercetin 7-O-glucosyltransferase activity","termid":"GO:0080044"}


id: PBO:0030914
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_chemical_stimulus_during_vegetative_growth","termid":"PBO:0030914"}


id: FYPO:0002872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of the endoplasmic reticulum (ER) is abnormal. In fission yeast, the ER is normally located in the cell cortex and tethered to the plasma membrane.","definition_xrefs":["PMID:23041194","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum organization","termid":"FYPO:0000805"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal endoplasmic reticulum localization","synonyms":[{"name":"abnormal ER localization","type":"exact"},{"name":"abnormal endoplasmic reticulum localisation","type":"exact"},{"name":"abnormal endoplasmic reticulum localization during mitotic cell cycle","type":"related"},{"name":"abnormal endoplasmic reticulum localization during vegetative growth","type":"exact"}],"termid":"FYPO:0002872"}


id: MONDO:0016644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Logopenic progressive aphasia (lv-PPA) is a form of primary progressive aphasia (PPA), characterized by impaired single-word retrieval and naming and impaired repetition with spared single-word comprehension and object knowledge.","definition_xrefs":["Orphanet:250831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary progressive aphasia","termid":"MONDO:0019806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"logopenic progressive aphasia","secondary_identifiers":["MEDGEN:907332","SCTID:716380002","DOID:0081389","UMLS:C4274665","GARD:10791"],"synonyms":[{"name":"LPA","type":"exact"},{"name":"Logopenic primary progressive aphasia","type":"exact"},{"name":"Logopenic variant PPA","type":"exact"}],"termid":"MONDO:0016644","xrefs":{"Monarch":{"xref_id":"0016644"}}}


id: PBO:0031910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase Ura6 (predicted)","termid":"PBO:0031910"}


id: GO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage to separate a pre-SSU-rRNA from a pre-LSU-rRNA originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000449"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002108"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000457"}


id: FYPO:0004401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the protein kinase inhibitor KT5926.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on KT5926","synonyms":[{"name":"normal cell population growth in presence of KT5926","type":"exact"},{"name":"normal cell population growth on KT5926","type":"exact"},{"name":"normal cellular response to KT5926","type":"related"},{"name":"normal vegetative cell population growth on KT5926","type":"exact"}],"termid":"FYPO:0004401"}


id: PR:P87179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wsc1 gene.","definition_xrefs":["UniProtKB:P87179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall integrity and stress response component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.01c","synonyms":[{"name":"Spom972h-wsc1","type":"exact"}],"termid":"PR:P87179"}


id: PBO:0091899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane high-affinity glucose:proton symporter Ght1","termid":"PBO:0091899"}


id: PBO:0045804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDRF1 antisense RNA 1","termid":"PBO:0045804"}


id: PBO:0058526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6071","termid":"PBO:0058526"}


id: GO:0106026
data:
  {"annotated_genes":["SJAG_01248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102339],"is_not":false,"summary":null,"term":"GO:0106026"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glycyl-tRNA(Ala) + H2O = tRNA(Ala) + glycine + H+.","definition_xrefs":["PMID:28362257","RHEA:53744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA deacylase activity","termid":"GO:0002161"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"Gly-tRNA(Ala) deacylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106026","terms_by_termid":{"GO:0106026":null}}


id: PBO:0046608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 10","termid":"PBO:0046608"}


id: GO:1903137
data:
  {"annotated_genes":["SJAG_04825","SJAG_03263","SJAG_01787","SJAG_04666","SJAG_01114","SJAG_00610","SJAG_05000","SJAG_04522","SJAG_03705","SJAG_02392","SJAG_00424","SJAG_03969"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97712,101317,105704,120326,108973,109543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[119900,69384,91260,89894,92595,94258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a cell integrity MAPK cascade.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated MAPK cascade","termid":"GO:0032872"},{"relation_name":"regulates","term_name":"cell integrity MAPK cascade","termid":"GO:0000196"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01114":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_03705":null,"SJAG_03969":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cell integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"regulation of Mpk1 cascade","type":"narrow"},{"name":"regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"regulation of Slt2 cascade","type":"narrow"},{"name":"regulation of cell integrity MAPK pathway","type":"exact"},{"name":"regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"},{"name":"regulation of cell wall integrity MAPK cascade","type":"narrow"}],"termid":"GO:1903137","terms_by_termid":{"GO:1903138":null,"GO:1903139":null}}


id: PBO:0047418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 9","termid":"PBO:0047418"}


id: PBO:0053990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1309","termid":"PBO:0053990"}


id: PBO:0066952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 254","termid":"PBO:0066952"}


id: GO:0014724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of twitch skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"},{"relation_name":"regulates","term_name":"twitch skeletal muscle contraction","termid":"GO:0014721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of twitch skeletal muscle contraction","termid":"GO:0014724"}


id: GO:0051427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for a hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hormone receptor binding","termid":"GO:0051427"}


id: PBO:0083781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein associated with the U1 snRNP complex; splicing factor involved in recognition of 5' splice site; contains two zinc finger motifs; N-terminal zinc finger binds pre-mRNA; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0083781"}


id: GO:0007169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor protein tyrosine kinase signaling pathway","secondary_identifiers":["Reactome:R-HSA-187015"],"synonyms":[{"name":"transmembrane receptor protein serine/threonine kinase signaling pathway","type":"broad"},{"name":"transmembrane receptor protein tyrosine kinase signalling pathway","type":"exact"}],"termid":"GO:0007169"}


id: FYPO:0002447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the N-glycosylation of one or more specific proteins, or of specific protein sites, is abnormal. Protein N-linked glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein via the N4 atom of peptidyl-asparagine, the omega-N of arginine, or the N1' atom peptidyl-tryptophan.","definition_xrefs":["PomBase:mah","GO:0006487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein N-linked glycosylation during vegetative growth","synonyms":[{"name":"abnormal protein N-glycosylation during vegetative growth","type":"exact"},{"name":"abnormal protein N-linked glycosylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002447"}


id: MONDO:0100308
data:
  {"annotated_genes":["SJAG_00797","SJAG_04641","SJAG_01356","SJAG_04418","SJAG_03923","SJAG_02242","SJAG_01417","SJAG_03862","SJAG_03393","SJAG_00526","SJAG_00421","SJAG_04822","SJAG_00686","SJAG_00863","SJAG_01168","SJAG_02196","SJAG_02377","SJAG_02885","SJAG_01317","SJAG_02680","SJAG_04233","SJAG_00933","SJAG_00721","SJAG_01945","SJAG_04622","SJAG_16456","SJAG_01179","SJAG_03692","SJAG_05332","SJAG_02084","SJAG_00059","SJAG_00380","SJAG_00645","SJAG_01400","SJAG_02457","SJAG_03720","SJAG_00773","SJAG_04533","SJAG_02119","SJAG_05212","SJAG_04110","SJAG_00087","SJAG_01438","SJAG_01854","SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014744"},{"annotations":[87246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[87221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[88678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[88609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[88006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012166"},{"annotations":[88122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012784"},{"annotations":[88842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013392"},{"annotations":[88522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[86982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[87095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014601"},{"annotations":[88270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[86837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"},{"annotations":[87984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[88598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[87360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100340"},{"annotations":[88917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958231"},{"annotations":[87896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958009"},{"annotations":[88558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012651"},{"annotations":[87307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012664"},{"annotations":[88871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013354"},{"annotations":[88481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013776"},{"annotations":[87615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014803"},{"annotations":[87810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033482"},{"annotations":[87721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[87498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[87063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[87576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[89078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[87015,87016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[87001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[87461,87460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[87655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[88104,88105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[88968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"},{"annotations":[87240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033115"},{"annotations":[87311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032923"},{"annotations":[88378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030312"},{"annotations":[88140,88141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030318"},{"annotations":[88147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030323"},{"annotations":[87418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[88429,88428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"},{"annotations":[87433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010547"},{"annotations":[87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","definition":"A central nervous system disease that consists of gait impairment, unclear (“scanning”) speech, visual blurring due to nystagmus, hand incoordination, and tremor with movement.","definition_xrefs":["ISBN-13:978-1-259-64403-0"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"nervous system 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disorder","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"ataxia","type":"related"},{"name":"ataxic 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id: PBO:0043332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal liver metastasis associated transcript 3","termid":"PBO:0043332"}


id: FYPO:0002223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the meiotic cell cycle is arrested in meiosis II. Meiosis II is the second phase of meiosis, in which cells divide and separate the two chromatids in each chromosome.","definition_xrefs":["GO:0007135","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiosis II","synonyms":[{"name":"abnormal cell cycle arrest in second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002223"}


id: GO:1905375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a homocysteine stimulus.","definition_xrefs":["PMID:26722473","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to homocysteine","termid":"GO:1905374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to homocysteine","synonyms":[{"name":"cellular response to 2-amino-4-mercaptobutyric acid","type":"exact"},{"name":"cellular response to 2-amino-4-sulfanylbutanoic acid","type":"exact"},{"name":"cellular response to Hcy","type":"exact"}],"termid":"GO:1905375"}


id: MONDO:0008979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign hereditary chorea (BHC) is a rare movement disorder that beginsin infancy or childhood. Signs and symptoms in infants may include low muscle tone, involuntary movements (chorea), lung infections, and respiratory distress. Signs and symptoms in children may include delayed motor and walking milestones, jerky muscle movements (myoclonus), upper limb dystonia, motor tics, and vocal tics. The chorea often improves with time. In some cases, myoclonus persists or worsens. Children with BHC can havenormal intellect, but may have learning and behavior problems. Other signs and symptoms include thyroid problems (e.g., hypothyroidism) and lung disease (e.g., recurring infections). Treatment is tailored to each child. Tetrabenazine and levodopa have been tried in individual cases with some success. BHC is caused by mutations in the NKX2-1 gene (also known as the TITF1 gene). It is passed through families in an autosomal dominant fashion.","definition_xrefs":["GARD:0001305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choreatic disease","termid":"MONDO:0001595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorea, benign familial","secondary_identifiers":["MESH:C565851","GARD:1305","UMLS:C1859098","OMIM:215450","MEDGEN:347799"],"synonyms":[{"name":"benign hereditary chorea","type":"related"},{"name":"chorea familial benign","type":"related"},{"name":"chorea, benign familial","type":"exact"}],"termid":"MONDO:0008979","xrefs":{"Monarch":{"xref_id":"0008979"}}}


id: MONDO:0015398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemifacial microsomia (obsolete MONDO:0015398)","termid":"MONDO:0015398","xrefs":{"Monarch":{"xref_id":"0015398"}}}


id: PBO:0049047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 37 like 1","termid":"PBO:0049047"}


id: GO:0047561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyanthranilate + O2 = 6-imino-5-oxocyclohexa-1,3-dienecarboxylate + H2O2.","definition_xrefs":["EC:1.10.3.5","RHEA:17245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxyanthranilate oxidase activity","secondary_identifiers":["KEGG_REACTION:R02666","MetaCyc:3-HYDROXYANTHRANILATE-OXIDASE-RXN"],"synonyms":[{"name":"3-hydroxyanthranilate:oxygen oxidoreductase activity","type":"related"},{"name":"3-hydroxyanthranilic acid oxidase activity","type":"related"}],"termid":"GO:0047561"}


id: PR:O74831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A frataxin, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16821:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.03c","secondary_identifiers":["UniProtKB:O74831"],"synonyms":[{"name":"Spom972h-FXN","type":"exact"}],"termid":"PR:O74831"}


id: MONDO:0004135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyroiditis associated with painless enlargement of the thyroid gland. It occurs more frequently in females and is characterized by alterations between hyperthyroidism and hypothyroidism and the eventual return to normal thyroid gland function.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute thyroiditis","termid":"MONDO:0001949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute lymphocytic thyroiditis","secondary_identifiers":["NCIT:C35829","DOID:7187","MEDGEN:266299","SCTID:361126006","UMLS:C1306804"],"synonyms":[{"name":"Subacute lymphocytic thyroiditis","type":"exact"},{"name":"Subacute painless thyroiditis","type":"exact"},{"name":"silent thyroiditis","type":"exact"}],"termid":"MONDO:0004135","xrefs":{"Monarch":{"xref_id":"0004135"}}}


id: PBO:0047563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF14 antisense RNA 2","termid":"PBO:0047563"}


id: PBO:0068950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 194, pseudogene","termid":"PBO:0068950"}


id: MONDO:0060585
data:
  {"annotated_genes":["SJAG_01522"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87040],"is_not":false,"summary":null,"term":"MONDO:0060585"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111212","MEDGEN:1617571","OMIM:617721","UMLS:C4540265"],"synonyms":[{"name":"HMN9","type":"related"},{"name":"neuronopathy, distal hereditary motor, type IX","type":"related"},{"name":"neuropathy, distal hereditary motor, type 9","type":"related"}],"termid":"MONDO:0060585","terms_by_termid":{"MONDO:0060585":null},"xrefs":{"Monarch":{"xref_id":"0060585"}}}


id: PBO:0012570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome complex subunit Ecm29","termid":"PBO:0012570"}


id: PBO:0059750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 24","termid":"PBO:0059750"}


id: GO:0004230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the release of a N-terminal glutamate (and to a lesser extent aspartate) from a peptide.","definition_xrefs":["EC:3.4.11.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminopeptidase activity","termid":"GO:0004177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008233","GO:0003674","GO:0016787","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"glutamyl aminopeptidase activity","secondary_identifiers":["MetaCyc:3.4.11.7-RXN"],"synonyms":[{"name":"Ca2+-activated glutamate aminopeptidase activity","type":"related"},{"name":"L-aspartate aminopeptidase activity","type":"related"},{"name":"aminopeptidase A","type":"related"},{"name":"angiotensinase A","type":"related"},{"name":"angiotensinase A2","type":"related"},{"name":"antigen BP-1/6C3 of mouse B lymphocytes","type":"related"},{"name":"aspartate aminopeptidase activity","type":"related"},{"name":"glutamyl peptidase activity","type":"related"},{"name":"membrane aminopeptidase II","type":"related"}],"termid":"GO:0004230"}


id: MONDO:0000273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A West Nile encephalitis that results in infection located in brain, has material basis in Kunjin virus, a subtype of West Nile Virus, which is transmitted by Culex annulirostris mosquito bite. The infection has symptom fever, has symptom rigor, has symptom headache, has symptom confusion, and has symptom lethargy.","definition_xrefs":["DOID:0050174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"West-Nile encephalitis","termid":"MONDO:0019376"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kunjin virus infectous disease","synonyms":[{"name":"Kunjin encephalitis","type":"exact"}],"termid":"MONDO:0000273","xrefs":{"Monarch":{"xref_id":"0000273"}}}


id: PBO:0031801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G2/M_phase_transition","termid":"PBO:0031801"}


id: PBO:0073723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signaling lymphocytic activation molecule family member 1","termid":"PBO:0073723"}


id: MOD:00563
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminogalactose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated","termid":"MOD:00734"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylaminogalactosylated residue","synonyms":[{"name":"GalNAcRes","type":"exact"},{"name":"HexNAc","type":"related"}],"termid":"MOD:00563"}


id: PBO:0081941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger HIT-type containing 6","termid":"PBO:0081941"}


id: SO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence obtained from a single sequencing experiment. Typically a read is produced when a base calling program interprets information from a chromatogram trace file produced from a sequencing machine.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"read","termid":"SO:0000150"}


id: MONDO:0020647
data:
  {"annotated_genes":["SJAG_01302"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88180],"is_not":false,"summary":null,"term":"MONDO:0020647"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01302":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, facial dysmorphism, renal agenesis, and ambiguous genitalia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4748348","OMIM:618142","MEDGEN:1648412"],"synonyms":[{"name":"MFRG","type":"exact"},{"name":"microcephaly, facial dysmorphism, renal agenesis, and ambiguous genitalia syndrome","type":"exact"}],"termid":"MONDO:0020647","terms_by_termid":{"MONDO:0020647":null},"xrefs":{"Monarch":{"xref_id":"0020647"}}}


id: PBO:0032769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2, Ubc11/UbcP4","termid":"PBO:0032769"}


id: PBO:0065900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB42, member RAS oncogene family, pseudogene 1","termid":"PBO:0065900"}


id: GO:1904737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation using acyl-CoA dehydrogenase.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25416781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid beta-oxidation","termid":"GO:0032000"},{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:1904735"},{"relation_name":"positively_regulates","term_name":"fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:0033539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","synonyms":[{"name":"activation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"narrow"},{"name":"up regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"up-regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"upregulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"}],"termid":"GO:1904737"}


id: MONDO:0005556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glomerulonephritis in the context of systemic lupus erythematosus.","definition_xrefs":["NCIT:C34789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"lupus nephritis","secondary_identifiers":["GARD:10747","DOID:0080162","UMLS:C0024143","MESH:D008181","EFO:0005761","NANDO:2200128","MEDGEN:6147","SCTID:68815009","icd11.foundation:1815692673"],"synonyms":[{"name":"Glomerulonephritides, lupus","type":"related"},{"name":"Nephritides, lupus","type":"related"},{"name":"SLE nephritis","type":"exact"},{"name":"glomerulonephritis, lupus","type":"related"},{"name":"lupus Glomerulonephritides","type":"related"},{"name":"lupus Nephritides","type":"related"},{"name":"lupus glomerulonephritis","type":"exact"},{"name":"lupus nephritis","type":"exact"},{"name":"nephritis, lupus","type":"related"}],"termid":"MONDO:0005556","xrefs":{"Monarch":{"xref_id":"0005556"}}}


id: PBO:0042434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 40","termid":"PBO:0042434"}


id: GO:0048896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a glial cell along the axons in a lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"},{"relation_name":"part_of","term_name":"lateral line nerve development","termid":"GO:0048892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell migration","synonyms":[{"name":"glial cell migration in lateral line nerve","type":"exact"}],"termid":"GO:0048896"}


id: PBO:0083846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hMtr3p (EXOSC6)","termid":"PBO:0083846"}


id: FYPO:0006052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of lipid droplets to the prospore membrane occurs to a normal (i.e. indistinguishable from wild type) extent.","definition_xrefs":["PMID:28011631","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal lipid droplet localization to prospore membrane leading edge","synonyms":[{"name":"normal lipid droplet localization to FSM leading edge","type":"exact"},{"name":"normal lipid droplet localization to forespore membrane leading edge","type":"exact"},{"name":"normal lipid particle localization to prospore membrane leading edge","type":"exact"}],"termid":"FYPO:0006052"}


id: SO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methoxycarbonylmethyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyl_two_thiouridine","secondary_identifiers":["RNAMOD:070"],"synonyms":[{"name":"5-methoxycarbonylmethyl-2-thiouridine","type":"exact"},{"name":"five methoxycarbonylmethyl two thiouridine","type":"exact"},{"name":"mcm5s2U","type":"exact"}],"termid":"SO:0001362"}


id: GO:0034248
data:
  {"annotated_genes":["SJAG_02380","SJAG_00685","SJAG_01402","SJAG_00792","SJAG_01187","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"},{"annotations":[117464,113334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[91516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[77908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"},{"annotations":[76916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_00792":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_02380":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of amide metabolism","type":"exact"},{"name":"regulation of cellular amide metabolic process","type":"exact"}],"termid":"GO:0034248","terms_by_termid":{"GO:0010510":null,"GO:0043456":null,"GO:1905569":null,"GO:1905857":null,"GO:2001211":null}}


id: GO:0002924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"negative regulation of humoral immune response","termid":"GO:0002921"},{"relation_name":"is_a","term_name":"regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002923"},{"relation_name":"negatively_regulates","term_name":"humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of humoral immune response mediated by circulating immunoglobulin","synonyms":[{"name":"down regulation of humoral immune response mediated by circulating immunoglobulin","type":"exact"},{"name":"down-regulation of humoral immune response mediated by circulating immunoglobulin","type":"exact"},{"name":"downregulation of humoral immune response mediated by circulating immunoglobulin","type":"exact"},{"name":"inhibition of humoral immune response mediated by circulating immunoglobulin","type":"narrow"}],"termid":"GO:0002924"}


id: GO:0031581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of hemidesmosomes, integrin-containing protein complexes that bind to laminin in the basal lamina. Hemidesmosomes form the contact between the basal surface of epithelial cells and the underlying basal lamina.","definition_xrefs":["GOC:dgh","PMID:15983403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction assembly","termid":"GO:0007044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"hemidesmosome assembly","secondary_identifiers":["Reactome:R-HSA-446107"],"termid":"GO:0031581"}


id: MONDO:0014541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cause of obesity that results from inheritance of two copies of chromosome 14 from the mother, and no copy of chromosome 14 from the father.","definition_xrefs":["NCIT:C120409"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor developmental delay due to 14q32.2 paternally expressed gene defect","secondary_identifiers":["Orphanet:254516","UMLS:C4015558","GARD:13431","OMIM:616222","MEDGEN:863995","DOID:0111713"],"synonyms":[{"name":"TEMPLE syndrome","type":"related"},{"name":"mUPD14 syndrome","type":"exact"},{"name":"maternal uniparental disomy chromosome 14 syndrome","type":"exact"},{"name":"uniparental disomy, maternal, chromosome 14","type":"related"}],"termid":"MONDO:0014541","xrefs":{"Monarch":{"xref_id":"0014541"}}}


id: MONDO:0017109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated cerebellar vermis agenesis","termid":"MONDO:0017107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated partial cerebellar vermis agenesis","secondary_identifiers":["GARD:20992","UMLS:C5680780","MEDGEN:1842645","Orphanet:269209"],"termid":"MONDO:0017109","xrefs":{"Monarch":{"xref_id":"0017109"}}}


id: PR:P36581
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calnexin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11073:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.11c","secondary_identifiers":["UniProtKB:P36581"],"synonyms":[{"name":"SPAC3C7.11c","type":"related"},{"name":"Spom972h-CANX","type":"exact"},{"name":"cnx1","type":"related"}],"termid":"PR:P36581"}


id: MONDO:0006614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign, chronic disease characterized by sterile pustular eruption, typically involving the flexural sites of the trunk and proximal extremities.","definition_xrefs":["Orphanet:48377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"subcorneal pustular dermatosis","secondary_identifiers":["ICD9:694.1","MedDRA:10042342","UMLS:C0600336","MEDGEN:108687","SCTID:25147002","DOID:8508","GARD:13606","MESH:D012872","EFO:1000771","icd11.foundation:1952122675"],"synonyms":[{"name":"Sneddon-Wilkinson disease","type":"exact"},{"name":"Sneddon-Wilkinson disease or syndrome","type":"exact"},{"name":"pustulosis subcornealis","type":"exact"},{"name":"subcorneal pustular dermatitis","type":"exact"},{"name":"subcorneal pustular dermatosis","type":"exact"}],"termid":"MONDO:0006614","xrefs":{"Monarch":{"xref_id":"0006614"}}}


id: GO:0033666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which the symbiont activates, maintains or increases its size or mass or its progression from an initial condition to a later condition, within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth or development of symbiont in host (obsolete GO:0033666)","synonyms":[{"name":"positive regulation of growth or development of symbiont in host","type":"exact"},{"name":"positive regulation of growth or development of symbiont within host","type":"exact"},{"name":"positive regulation of invasive growth","type":"broad"},{"name":"up regulation of growth or development of organism within host","type":"exact"},{"name":"up-regulation of growth or development of organism within host","type":"exact"},{"name":"upregulation of growth or development of organism within host","type":"exact"}],"termid":"GO:0033666"}


id: PBO:0081821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 738","termid":"PBO:0081821"}


id: PBO:0004235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase complex subunit H (predicted)","termid":"PBO:0004235"}


id: PBO:0085154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome-binding component of the SWR1 complex; SWR1 exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for vacuolar protein sorting","termid":"PBO:0085154"}


id: PBO:0065386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC4 and SRSF1 interacting protein 1","termid":"PBO:0065386"}


id: PBO:0065130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cGMP-dependent 2","termid":"PBO:0065130"}


id: PR:Q9URY3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TBC1 domain family member 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C1952.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.17c","secondary_identifiers":["UniProtKB:Q9URY3"],"synonyms":[{"name":"Spom972h-TBC1D13","type":"exact"}],"termid":"PR:Q9URY3"}


id: GO:1900032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trichome patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"trichome patterning","termid":"GO:0048629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of trichome patterning","synonyms":[{"name":"regulation of trichome distribution","type":"broad"},{"name":"regulation of trichome pattern biosynthesis","type":"exact"},{"name":"regulation of trichome pattern formation","type":"exact"},{"name":"regulation of trichome pattern specification","type":"related"},{"name":"regulation of trichome spacing","type":"exact"}],"termid":"GO:1900032"}


id: GO:0046931
data:
  {"annotated_genes":["SJAG_01833"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051292"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a pore complex. A pore complex is a small opening in a membrane that allows the passage of liquids and/or gases.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01833":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"pore complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pore biosynthesis","type":"exact"},{"name":"pore complex biogenesis","type":"related"},{"name":"pore formation","type":"exact"},{"name":"pore-forming toxin activity","type":"related"}],"termid":"GO:0046931","terms_by_termid":{"GO:0051292":null}}


id: MONDO:0006345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial fibromatosis arising from the soft tissue of the palm. It is characterized by the presence of spindle-shaped fibroblasts, and an infiltrative growth pattern. It predominantly affects adult males.","definition_xrefs":["NCIT:C3469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superficial Fibromatosis","termid":"MONDO:0016037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmar fibromatosis","secondary_identifiers":["EFO:1000438","HP:0005679","MEDGEN:903450","MESH:D004387","SCTID:274142002","SCTID:203045001","UMLS:C4085370"],"synonyms":[{"name":"Dupuytren contracture","type":"exact"},{"name":"Dupuytren contracture (disease)","type":"exact"},{"name":"Dupuytren's contracture","type":"related"},{"name":"palmar fibromatosis","type":"exact"},{"name":"palmar part of manus fibromatosis","type":"exact"}],"termid":"MONDO:0006345","xrefs":{"Monarch":{"xref_id":"0006345"}}}


id: PBO:0003961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpb8","termid":"PBO:0003961"}


id: MONDO:0024516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hidradenitis suppurativa that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hidradenitis suppurativa","termid":"MONDO:0006559"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial acne inversa","secondary_identifiers":["MEDGEN:326766","OMIMPS:142690","UMLS:C1840560"],"synonyms":[{"name":"ACNINV","type":"exact"},{"name":"familial hidradenitis suppurativa","type":"exact"},{"name":"hereditary hidradenitis suppurativa","type":"exact"}],"termid":"MONDO:0024516","xrefs":{"Monarch":{"xref_id":"0024516"}}}


id: MONDO:1010280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Priapism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priapism, non-human animal","secondary_identifiers":["OMIA:001166"],"termid":"MONDO:1010280","xrefs":{"Monarch":{"xref_id":"1010280"}}}


id: PBO:0038274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_insertion_and_deletion","termid":"PBO:0038274"}


id: GO:0045577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of B cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte differentiation","termid":"GO:0045619"},{"relation_name":"is_a","term_name":"regulation of B cell activation","termid":"GO:0050864"},{"relation_name":"regulates","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell differentiation","synonyms":[{"name":"regulation of B cell development","type":"related"},{"name":"regulation of B lymphocyte differentiation","type":"exact"},{"name":"regulation of B-cell differentiation","type":"exact"},{"name":"regulation of B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045577"}


id: MONDO:0010611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of L1 syndrome caused by changes in the L1CAM gene characterized by severe hydrocephalus mostly with prenatal onset, signs of intracranial hypertension, adducted thumbs, spasticity, and severe intellectual deficit. HSAS represents the severe end of the spectrum and is associated with poor prognosis.","definition_xrefs":["Orphanet:2182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"},{"relation_name":"is_a","term_name":"L1 syndrome","termid":"MONDO:0017140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked hydrocephalus with stenosis of the aqueduct of Sylvius","secondary_identifiers":["SCTID:71779008","GARD:434","UMLS:C0265216","icd11.foundation:1284135636","MESH:C536078","OMIM:307000","MEDGEN:75552"],"synonyms":[{"name":"Bickers-Adams syndrome","type":"exact"},{"name":"HSAS","type":"exact"},{"name":"HSAS1","type":"related"},{"name":"HYCX","type":"related"},{"name":"X-linked HSAS","type":"exact"},{"name":"X-linked acqueductal stenosis","type":"exact"},{"name":"X-linked hydrocephalus","type":"exact"},{"name":"X-linked hydrocephalus with stenosis of aqueduct of Sylvius","type":"exact"},{"name":"X-linked hydrocephalus with stenosis of the aqueduct of Sylvius","type":"exact"},{"name":"XLAS","type":"related"},{"name":"aqueductal stenosis, X-linked","type":"related"},{"name":"hydrocephalus due to aqueductal stenosis, X-linked recessive","type":"exact"},{"name":"hydrocephalus due to congenital stenosis of aqueduct of Sylvius","type":"related"},{"name":"hydrocephalus with congenital idiopathic intestinal pseudoobstruction, X-linked recessive","type":"exact"},{"name":"hydrocephalus with hirschsprung disease, X-linked recessive","type":"exact"},{"name":"hydrocephalus with stenosis of the aqueduct of Sylvius","type":"exact"},{"name":"hydrocephalus, X-linked","type":"related"},{"name":"hydrocephalus, X-linked, with congenital idiopathic intestinal pseudoobstruction","type":"related"}],"termid":"MONDO:0010611","xrefs":{"Monarch":{"xref_id":"0010611"}}}


id: PBO:0013111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead domain","termid":"PBO:0013111"}


id: PBO:0089356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane fluoride export channel","termid":"PBO:0089356"}


id: GO:0010346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a shoot axis. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ formation","termid":"GO:1905393"},{"relation_name":"part_of","term_name":"shoot system morphogenesis","termid":"GO:0010016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot axis formation","synonyms":[{"name":"shoot formation","type":"related"}],"termid":"GO:0010346"}


id: MONDO:0003845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the corpus callosum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral hemisphere lipoma","termid":"MONDO:0003843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum lipoma","secondary_identifiers":["DOID:6294","UMLS:C1333160","MEDGEN:272510","NCIT:C5438"],"synonyms":[{"name":"corpus callosum lipoma","type":"exact"},{"name":"lipoma of corpus callosum","type":"exact"},{"name":"lipoma of the corpus callosum","type":"exact"}],"termid":"MONDO:0003845","xrefs":{"Monarch":{"xref_id":"0003845"}}}


id: GO:1902780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonane stimulus.","definition_xrefs":["GOC:mengo_curators","GO_REF:0000071","GOC:TermGenie","PMID:22958739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nonane","termid":"GO:1902780"}


id: GO:0048238
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the smooth endoplasmic reticulum.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum","termid":"GO:0005790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"smooth endoplasmic reticulum lumen","secondary_identifiers":["NIF_Subcellular:sao927884761"],"synonyms":[{"name":"SER lumen","type":"exact"},{"name":"smooth ER lumen","type":"exact"}],"termid":"GO:0048238"}


id: PBO:0059827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTERF1 pseudogene 1","termid":"PBO:0059827"}


id: FYPO:0003470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is increased.","definition_xrefs":["PomBase:mah","PMID:24298023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"increased RNA splicing, via spliceosome","termid":"FYPO:0002916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased mRNA splicing, via spliceosome","synonyms":[{"name":"increased mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"increased mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"increased nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"increased splicing","type":"broad"}],"termid":"FYPO:0003470"}


id: GO:0098675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the neuronal dense core vesicle membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of neuronal dense core vesicle membrane (obsolete GO:0098675)","synonyms":[{"name":"intrinsic to neuronal dense core granule membrane","type":"exact"}],"termid":"GO:0098675"}


id: GO:0070210
data:
  {"annotated_genes":["SJAG_00868","SJAG_04758","SJAG_03255","SJAG_03867","SJAG_03230","SJAG_02981","SJAG_01926","SJAG_03441","SJAG_03627","SJAG_00441","SJAG_01230","SJAG_02439","SJAG_00581","SJAG_02846","SJAG_04396","SJAG_04389","SJAG_04576"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61489,64457,76547,77593,79115,79917,80481,80762,82059,90929,95081,96495,106633,108677,112427,116121,116212],"is_not":false,"summary":null,"term":"GO:0070210"}]},"cv_name":"cellular_component","definition":"A protein complex that contains a histone deacetylase and is part of the chromatin remodeling machinery. In Saccharomyces cerevisiae this complex contains the Rpd3p, Sin3p, Ume1p, Pho23p, Sap30p, Sds3p, Cti6p, Rxt2p, Rxt3p, Dep1p, Ume6p, Ash1p, Dot6p, Snt1, Sif2p, Set3p, Hos2p, Tos4p and Tod6p proteins.","definition_xrefs":["GOC:rb","PMID:19040720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_01230":null,"SJAG_01926":null,"SJAG_02439":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03627":null,"SJAG_03867":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04576":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005654","GO:0005694"],"is_obsolete":false,"name":"Rpd3L-Expanded complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"Clr6-LE complex","type":"exact"}],"termid":"GO:0070210","terms_by_termid":{"GO:0070210":null}}


id: MONDO:0030844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 47","secondary_identifiers":["OMIM:619102","MEDGEN:1721477","DOID:0112175","UMLS:C5436818"],"synonyms":[{"name":"SPGF47","type":"exact"},{"name":"spermatogenic failure 47","type":"exact"}],"termid":"MONDO:0030844","xrefs":{"Monarch":{"xref_id":"0030844"}}}


id: MONDO:0014226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary immunodeficiency disorder characterized by persistent CD4 T-cell lymphopenia (less than 300 cells/B5L on multiple occasions) not associated with any other underlying primary or secondary immune deficiency. Patients typically present opportunistic infections (with cryptococcal, mycobacterial, candidal, varicella zoster virus infections and progressive multifocal leukoencephalopathy being the most prevalent), malignancies (mainly lymphoproliferative disorders), or autoimmune disorders. Some individuals are asymptomatic and incidentally diagnosed.","definition_xrefs":["Orphanet:228000"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"idiopathic CD4 lymphocytopenia","secondary_identifiers":["DOID:0111987","icd11.foundation:1639000446","OMIM:615518","GARD:12375","MEDGEN:816098","SCTID:763713000","UMLS:C3809768"],"synonyms":[{"name":"ICL","type":"related"},{"name":"IMD13","type":"related"},{"name":"idiopathic CD4 positive T-lymphocytopenia","type":"related"},{"name":"idiopathic Cd4 lymphopenia","type":"related"},{"name":"immunodeficiency 13","type":"related"},{"name":"immunodeficiency type 13","type":"exact"}],"termid":"MONDO:0014226","xrefs":{"Monarch":{"xref_id":"0014226"}}}


id: GO:0004634
data:
  {"annotated_genes":["SJAG_02369","SJAG_00461","SJAG_02107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71582,72140,78770],"is_not":false,"summary":null,"term":"GO:0004634"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phospho-D-glycerate = phosphoenolpyruvate + H2O.","definition_xrefs":["ISBN:0198506732","EC:4.2.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_02107":null,"SJAG_02369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphopyruvate hydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:2PGADEHYDRAT-RXN","Reactome:R-HSA-71660","RHEA:10164","Reactome:R-HSA-70494"],"synonyms":[{"name":"14-3-2-protein","type":"related"},{"name":"2-phospho-D-glycerate hydro-lyase (phosphoenolpyruvate-forming)","type":"related"},{"name":"2-phospho-D-glycerate hydro-lyase activity","type":"related"},{"name":"2-phospho-D-glycerate-hydrolase activity","type":"exact"},{"name":"2-phosphoglycerate dehydratase activity","type":"related"},{"name":"2-phosphoglycerate enolase activity","type":"related"},{"name":"2-phosphoglyceric dehydratase activity","type":"related"},{"name":"enolase activity","type":"related"},{"name":"gamma-enolase activity","type":"related"},{"name":"nervous-system specific enolase","type":"narrow"},{"name":"phosphoenolpyruvate hydratase activity","type":"related"}],"termid":"GO:0004634","terms_by_termid":{"GO:0004634":null}}


id: MONDO:0012952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 9","secondary_identifiers":["MEDGEN:390810","OMIM:612590","UMLS:C2675482"],"synonyms":[{"name":"CRCS9","type":"exact"},{"name":"colorectal cancer, susceptibility to, 9","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 16Q","type":"related"}],"termid":"MONDO:0012952","xrefs":{"Monarch":{"xref_id":"0012952"}}}


id: PBO:0091157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine/xanthine/hypoxanthine phosphoribosyltransferase Hpt1","termid":"PBO:0091157"}


id: MONDO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory disease affecting the esophageal wall.","definition_xrefs":["NCIT:C9224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophagitis","secondary_identifiers":["ICD9:530.1","ICD9:530.12","MEDGEN:4549","DOID:11963","HP:0100633","MESH:D004941","SCTID:16761005","ICD9:530.10","UMLS:C0014868"],"synonyms":[{"name":"acute esophagitis","type":"narrow"},{"name":"esophagitis","type":"exact"},{"name":"esophagitis (disease)","type":"exact"},{"name":"esophagus inflammation","type":"exact"},{"name":"inflammation of esophagus","type":"exact"},{"name":"inflammation of oesophagus","type":"exact"},{"name":"oesophagus inflammation","type":"exact"}],"termid":"MONDO:0001409","xrefs":{"Monarch":{"xref_id":"0001409"}}}


id: GO:0002922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a humoral immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of humoral immune response","synonyms":[{"name":"activation of humoral immune response","type":"narrow"},{"name":"stimulation of humoral immune response","type":"narrow"},{"name":"up regulation of humoral immune response","type":"exact"},{"name":"up-regulation of humoral immune response","type":"exact"},{"name":"upregulation of humoral immune response","type":"exact"}],"termid":"GO:0002922"}


id: MONDO:0004120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neuroendocrine carcinoma that arises from the Bartholin gland and is characterized by the presence of malignant small cells and high mitotic activity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"bartholin gland carcinoma","termid":"MONDO:0002829"},{"relation_name":"is_a","term_name":"vulvar neuroendocrine carcinoma","termid":"MONDO:0056816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Bartholin gland small cell carcinoma","secondary_identifiers":["DOID:7140","MEDGEN:267705","NCIT:C40298","UMLS:C1511051"],"synonyms":[{"name":"Bartholin gland small cell carcinoma","type":"exact"},{"name":"Bartholin's gland small cell carcinoma","type":"exact"},{"name":"major vestibular gland small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of major vestibular gland","type":"exact"}],"termid":"MONDO:0004120","xrefs":{"Monarch":{"xref_id":"0004120"}}}


id: FYPO:0006004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule organization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0031122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal interphase microtubule organization","synonyms":[{"name":"normal cytoplasmic microtubule organization during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule organization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule organization during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule organization","type":"exact"},{"name":"normal interphase microtubule organisation","type":"exact"}],"termid":"FYPO:0006004"}


id: PBO:0114647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex DNAJ domain subunit Sec63","termid":"PBO:0114647"}


id: MONDO:0011720
data:
  {"annotated_genes":["SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88622,88623],"is_not":false,"summary":null,"term":"MONDO:0011720"}]},"cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the SLC26A8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:606766","GARD:18399","MEDGEN:1648302","DOID:0070168","MESH:C564665","UMLS:C4721889"],"synonyms":[{"name":"SLC26A8 azoospermia","type":"exact"},{"name":"SPGF3","type":"related"},{"name":"azoospermia caused by mutation in SLC26A8","type":"exact"},{"name":"spermatogenic failure 3","type":"exact"},{"name":"spermatogenic failure type 3","type":"exact"}],"termid":"MONDO:0011720","terms_by_termid":{"MONDO:0011720":null},"xrefs":{"Monarch":{"xref_id":"0011720"}}}


id: GO:0015095
data:
  {"annotated_genes":["SJAG_03516","SJAG_02484","SJAG_04111","SJAG_02578","SJAG_01639","SJAG_00211"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56946,72038,76246,77355,79214,118965],"is_not":false,"summary":null,"term":"GO:0015095"}]},"cv_name":"molecular_function","definition":"Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00211":null,"SJAG_01639":null,"SJAG_02484":null,"SJAG_02578":null,"SJAG_03516":null,"SJAG_04111":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"magnesium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-442661","Reactome:R-HSA-5339538","Reactome:R-HSA-5336454","Reactome:R-HSA-5339528","MetaCyc:TRANS-RXN-141","Reactome:R-HSA-5336466","Reactome:R-HSA-5336453"],"termid":"GO:0015095","terms_by_termid":{"GO:0015095":null}}


id: PBO:0090662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase I Ghs1","termid":"PBO:0090662"}


id: PBO:0035964
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_number_of_Rad52_foci_during_mitotic_S_phase","termid":"PBO:0035964"}


id: PBO:0061037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIP7 pseudogene 3","termid":"PBO:0061037"}


id: PBO:0051609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 33","termid":"PBO:0051609"}


id: FYPO:0000183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of polyadenylated mRNA from the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA export from nucleus","termid":"FYPO:0000204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal poly(A)+ mRNA export from nucleus","synonyms":[{"name":"abnormal poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"abnormal poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"abnormal polyadenylated mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0000183"}


id: PBO:0030493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-coenzyme_Q10_absent_from_cell","termid":"PBO:0030493"}


id: PBO:0005865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0321 family protein 2","termid":"PBO:0005865"}


id: MONDO:1012221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic hepatic encephalopathy, non-human animal","termid":"MONDO:1011777"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic hepatic encephalopathy, dog","secondary_identifiers":["OMIA:000816-9615"],"termid":"MONDO:1012221","xrefs":{"Monarch":{"xref_id":"1012221"}}}


id: PBO:0013460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo70","termid":"PBO:0013460"}


id: FYPO:0004835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to nucleus during cellular response to hydrogen peroxide","synonyms":[{"name":"abolished protein localisation to nucleus during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein localization to nucleus during cellular response to H2O2","type":"exact"},{"name":"abolished protein localization to nucleus during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleus during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"nuclear exclusion during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear protein exclusion during cellular response to hydrogen peroxide","type":"related"},{"name":"protein localization to nucleus abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004835"}


id: PBO:0044830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 117 (pseudogene)","termid":"PBO:0044830"}


id: GO:0140105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-10 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11244051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-10-mediated signaling pathway","synonyms":[{"name":"IL-10-mediated signaling pathway","type":"exact"},{"name":"interleukin-10-mediated signalling pathway","type":"exact"}],"termid":"GO:0140105"}


id: GO:0032119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of zinc ion (obsolete GO:0032119)","termid":"GO:0032119"}


id: GO:0052723
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58610],"is_not":false,"summary":null,"term":"GO:0052723"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol hexakisphosphate + ATP = 1-diphospho-1D-myo-inositol 2,3,4,5,6-pentakisphosphate + ADP.","definition_xrefs":["RHEA:37459","PMID:18981179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"inositol hexakisphosphate 1-kinase activity","references_by_uniquename":{"GO_REF:0000117":null},"secondary_identifiers":["KEGG_REACTION:R05799","MetaCyc:RXN-10972"],"termid":"GO:0052723","terms_by_termid":{"GO:0052723":null}}


id: _global:participates_in_a_biotic-biotic_interaction_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"biotically_interacts_with","termid":"_global:biotically_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"participates_in_a_biotic-biotic_interaction_with","secondary_identifiers":["RO:0002574"],"termid":"_global:participates_in_a_biotic-biotic_interaction_with"}


id: PBO:0048173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP stress granule assembly factor 2","termid":"PBO:0048173"}


id: PBO:0077334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 71","termid":"PBO:0077334"}


id: GO:0032260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus received in the context of the jasmonic acid- and ethylene (ethene)-dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to jasmonic acid","termid":"GO:0009753"},{"relation_name":"part_of","term_name":"jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance","synonyms":[{"name":"response to jasmonic acid stimulus during jasmonic acid and ethylene-dependent systemic resistance","type":"related"}],"termid":"GO:0032260"}


id: MONDO:0007936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"},{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular dystrophy, fenestrated sheen type","secondary_identifiers":["UMLS:C1835173","OMIM:153890","MESH:C563607","MEDGEN:331921"],"synonyms":[{"name":"macular dystrophy, fenestrated sheen type","type":"exact"}],"termid":"MONDO:0007936","xrefs":{"Monarch":{"xref_id":"0007936"}}}


id: PBO:0040357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 6","termid":"PBO:0040357"}


id: PBO:0091933
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA substrate KM 20 nM, Vmax 1.1-2.5 nM/min","termid":"PBO:0091933"}


id: PBO:0027987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_enlarged_around_nucleus","termid":"PBO:0027987"}


id: MONDO:0015813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extranodal lymphoma of lymphoid tissue associated with mucosa that is in contact with exogenous antigens. Many of the sites of these lymphomas, such as the stomach, salivary gland, and thyroid, are normally devoid of lymphoid tissue. They acquire mucosa-associated lymphoid tissue (malt) type as a result of an immunologically mediated disorder.","definition_xrefs":["MESH:D018442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent primary cutaneous B-cell lymphoma","termid":"MONDO:0015819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"primary cutaneous marginal zone B-cell lymphoma","secondary_identifiers":["UMLS:C1275321","GARD:20159","NCIT:C7230","SCTID:404140004","Orphanet:178536","MEDGEN:698594"],"synonyms":[{"name":"C-MALT","type":"exact"},{"name":"PCMZL","type":"exact"},{"name":"Primary cutaneous marginal zone B cell lymphoma of mucosa-associated lymphoid tissue","type":"exact"},{"name":"Primary cutaneous marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue","type":"exact"},{"name":"Primary cutaneous marginal zone lymphoma of mucosa-associated lymphoid tissue","type":"exact"},{"name":"cutaneous Immunocytoma","type":"exact"},{"name":"marginal zone B cell lymphoma of skin","type":"exact"},{"name":"marginal zone B cell lymphoma of the skin","type":"exact"},{"name":"salt lymphoma","type":"exact"},{"name":"skin-associated lymphoid tissue lymphoma","type":"exact"}],"termid":"MONDO:0015813","xrefs":{"Monarch":{"xref_id":"0015813"}}}


id: GO:0033475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an indole-3-acetic acid amide conjugate, a form of indoleacetic acid covalently bound to an amino acid or polypeptide through an amide bond.","definition_xrefs":["MetaCyc:PWY-1782","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid conjugate biosynthetic process","termid":"GO:0033474"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"indoleacetic acid amide conjugate biosynthetic process","synonyms":[{"name":"IAA amide conjugate biosynthetic process","type":"exact"},{"name":"indole acetic acid amide conjugate biosynthesis","type":"exact"},{"name":"indole acetic acid amide conjugate biosynthetic process","type":"exact"},{"name":"indoleacetic acid amide conjugate anabolism","type":"exact"},{"name":"indoleacetic acid amide conjugate biosynthesis","type":"exact"},{"name":"indoleacetic acid amide conjugate formation","type":"exact"},{"name":"indoleacetic acid amide conjugate synthesis","type":"exact"}],"termid":"GO:0033475"}


id: PBO:0091380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial CHCH domain protein Mix17","termid":"PBO:0091380"}


id: PBO:0068110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 417","termid":"PBO:0068110"}


id: GO:0050515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-CDP-2-C-methyl-D-erythritol + ATP = 4-CDP-2-C-methyl-D-erythritol 2-phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:18437","EC:2.7.1.148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity","secondary_identifiers":["MetaCyc:2.7.1.148-RXN","KEGG_REACTION:R05634","GO:0008698"],"synonyms":[{"name":"4-diphosphocytidyl-2-C-methyl-D-erythritol kinase activity","type":"related"},{"name":"4-diphosphocytidyl-2C-methyl-D-erythritol kinase activity","type":"exact"},{"name":"ATP:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol 2-phosphotransferase activity","type":"related"},{"name":"CDP-ME kinase activity","type":"related"},{"name":"CMK activity","type":"related"}],"termid":"GO:0050515"}


id: MONDO:0006628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sezary disease (obsolete MONDO:0006628)","synonyms":[{"name":"obsolete Sezary's disease","type":"exact"}],"termid":"MONDO:0006628","xrefs":{"Monarch":{"xref_id":"0006628"}}}


id: PBO:0109278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3113","termid":"PBO:0109278"}


id: SOFP:qseq_type
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qseq_type","termid":"SOFP:qseq_type"}


id: PBO:0071654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 18","termid":"PBO:0071654"}


id: PBO:0054975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2389","termid":"PBO:0054975"}


id: PATO:0001387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An aneuploidy quality inhering in a bearer by virtue of the bearer's containing only two chromosome from a pair in a cell's nucleus.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Disomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid","termid":"PATO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disomy","termid":"PATO:0001387"}


id: PBO:0068574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 25, pseudogene","termid":"PBO:0068574"}


id: PBO:0017528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5, Tif5(predicted)","termid":"PBO:0017528"}


id: PBO:0050192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene","termid":"PBO:0050192"}


id: GO:0046514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ceramides, any N-acetylated sphingoid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide metabolic process","termid":"GO:0006672"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ceramide catabolic process","synonyms":[{"name":"ceramide breakdown","type":"exact"},{"name":"ceramide catabolism","type":"exact"},{"name":"ceramide degradation","type":"exact"}],"termid":"GO:0046514"}


id: GO:0003179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of a heart valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve morphogenesis","synonyms":[{"name":"heart valve remodeling","type":"narrow"},{"name":"heart valve remodelling","type":"narrow"}],"termid":"GO:0003179"}


id: GO:0032789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving unsaturated monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-) and one or more unsaturated C-C bonds.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"unsaturated monocarboxylic acid metabolic process","synonyms":[{"name":"unsaturated monocarboxylate metabolic process","type":"exact"},{"name":"unsaturated monocarboxylic acid metabolism","type":"exact"}],"termid":"GO:0032789"}


id: GO:0034377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-covalent aggregation and arrangement of proteins and lipids to form a plasma lipoprotein particle.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex assembly","termid":"GO:0065005"},{"relation_name":"is_a","term_name":"plasma lipoprotein particle organization","termid":"GO:0071827"},{"relation_name":"part_of","term_name":"regulation of plasma lipoprotein particle levels","termid":"GO:0097006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"plasma lipoprotein particle assembly","secondary_identifiers":["Reactome:R-HSA-8963898"],"termid":"GO:0034377"}


id: PBO:0050404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 6","termid":"PBO:0050404"}


id: GO:0048796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a swim bladder to attain its fully functional state. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"swim bladder development","termid":"GO:0048794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder maturation","synonyms":[{"name":"gas bladder maturation","type":"exact"}],"termid":"GO:0048796"}


id: MONDO:0033008
data:
  {"annotated_genes":["SJAG_00378"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87042],"is_not":false,"summary":null,"term":"MONDO:0033008"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00378":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617730","MEDGEN:1613511","DOID:0080246","UMLS:C4540270","GARD:16248"],"synonyms":[{"name":"GAMOS4","type":"related"},{"name":"Galloway-Mowat syndrome 4","type":"exact"}],"termid":"MONDO:0033008","terms_by_termid":{"MONDO:0033008":null},"xrefs":{"Monarch":{"xref_id":"0033008"}}}


id: PBO:0064105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"praja ring finger ubiquitin ligase 1","termid":"PBO:0064105"}


id: GO:0072507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent cations within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete divalent inorganic cation homeostasis (obsolete GO:0072507)","termid":"GO:0072507"}


id: GO:0060077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell reduces the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory synapse","secondary_identifiers":["Wikipedia:Inhibitory_postsynaptic_potential"],"termid":"GO:0060077"}


id: FYPO:0000434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which fermentation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal fermentation","synonyms":[{"name":"fermentative metabolism: normal","type":"related"},{"name":"normal fermentation during mitotic cell cycle","type":"related"},{"name":"normal fermentation during vegetative growth","type":"exact"},{"name":"normal fermentative metabolism","type":"exact"}],"termid":"FYPO:0000434"}


id: PBO:0040188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 1","termid":"PBO:0040188"}


id: MONDO:0022752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"},{"relation_name":"is_a","term_name":"Rubinstein-Taybi syndrome","termid":"MONDO:0019188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"chromosome 16p13.3 deletion syndrome","secondary_identifiers":["MESH:C566433","UMLS:C3502510","MEDGEN:502906"],"synonyms":[{"name":"RSTS, Severe","type":"related"},{"name":"Rubinstein-Taybi syndrome, Severe","type":"related"}],"termid":"MONDO:0022752","xrefs":{"Monarch":{"xref_id":"0022752"}}}


id: MONDO:0017524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly of a biphalangeal thumb","termid":"MONDO:0008269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of a biphalangeal thumb, bilateral","secondary_identifiers":["Orphanet:295146"],"synonyms":[{"name":"preaxial polydactyly type 1, bilateral","type":"exact"}],"termid":"MONDO:0017524","xrefs":{"Monarch":{"xref_id":"0017524"}}}


id: PBO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.14.-","termid":"PBO:0001791"}


id: GO:0045036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the chloroplast, usually using signals contained within the protein. Imported proteins are synthesized as cytosolic precursors containing N-terminal uptake-targeting sequences that direct each protein to its correct subcompartment and are subsequently cleaved.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"establishment of protein localization to chloroplast","termid":"GO:0072596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"protein targeting to chloroplast","synonyms":[{"name":"protein-chloroplast targeting","type":"exact"}],"termid":"GO:0045036"}


id: MONDO:0027676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital anomaly of kidney and urinary tract in which the cause of the disease is a mutation in the TBX18 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of kidney and urinary tract","termid":"MONDO:0019719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital anomalies of kidney and urinary tract 2","secondary_identifiers":["DOID:0080207","UMLS:C5574705","OMIM:143400","MEDGEN:1804316"],"synonyms":[{"name":"CAKUT2","type":"related"},{"name":"TBX18 congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"congenital anomalies of kidney and urinary tract 2","type":"exact"},{"name":"congenital anomalies of kidney and urinary tract type 2","type":"exact"},{"name":"congenital anomaly of kidney and urinary tract caused by mutation in TBX18","type":"exact"},{"name":"hydronephrosis due to Pujo","type":"related"},{"name":"multicystic renal dysplasia, bilateral","type":"related"},{"name":"pelviureteric junction obstruction","type":"related"},{"name":"ureteropelvic junction obstruction","type":"related"}],"termid":"MONDO:0027676","xrefs":{"Monarch":{"xref_id":"0027676"}}}


id: GO:0031356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of chloroplast inner membrane (obsolete GO:0031356)","synonyms":[{"name":"intrinsic to chloroplast inner membrane","type":"narrow"}],"termid":"GO:0031356"}


id: MONDO:0008144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete osteochondritis dissecans (obsolete MONDO:0008144)","termid":"MONDO:0008144","xrefs":{"Monarch":{"xref_id":"0008144"}}}


id: PR:O94354
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An argininosuccinate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02459","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.05c","secondary_identifiers":["UniProtKB:O94354"],"synonyms":[{"name":"Spom972h-ASS1","type":"exact"},{"name":"citrulline--aspartate ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94354"}


id: GO:0048647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals that have the potential to develop any of several possible distinct developmental paths have their individual developmental fates determined in response to environmental and/or genetic cues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyphenic determination","termid":"GO:0048647"}


id: PBO:0042761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 44","termid":"PBO:0042761"}


id: GO:0038185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a bile acid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:36409000","PMID:10334992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid signaling pathway","termid":"GO:0038183"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nuclear receptor-mediated bile acid signaling pathway","synonyms":[{"name":"BAR signaling pathway","type":"related"},{"name":"FXR signaling pathway","type":"exact"},{"name":"farnesoid X receptor signaling pathway","type":"exact"},{"name":"intracellular bile acid receptor signaling pathway","type":"exact"},{"name":"nuclear bile acid receptor signaling pathway","type":"related"}],"termid":"GO:0038185"}


id: GO:0007303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of cytoplasmic constituents synthesized in the nurse cells to the oocyte.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic transport, nurse cell to oocyte (obsolete GO:0007303)","termid":"GO:0007303"}


id: GO:0007295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of the egg chamber between the time it leaves the germarium and the onset of vitellogenesis. During this time both nurse cells and the oocyte undergo developmental changes including nuclear organization and cytoplasmic growth. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth of a germarium-derived egg chamber","synonyms":[{"name":"egg chamber growth","type":"exact"}],"termid":"GO:0007295"}


id: PBO:0068867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 107, pseudogene","termid":"PBO:0068867"}


id: GO:0047548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyleneglutarate = 2-methylene-3-methylsuccinate.","definition_xrefs":["RHEA:13793","EC:5.4.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-methyleneglutarate mutase activity","secondary_identifiers":["KEGG_REACTION:R03908","MetaCyc:2-METHYLENEGLUTARATE-MUTASE-RXN"],"synonyms":[{"name":"2-methyleneglutarate carboxy-methylenemethylmutase activity","type":"related"},{"name":"alpha-methyleneglutarate mutase activity","type":"related"}],"termid":"GO:0047548"}


id: PBO:0073987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 1","termid":"PBO:0073987"}


id: FYPO:0000126
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005152"},{"annotations":[121160,121134,121149,121155,121163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007521"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased resistance to a chemical stimulus. 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id: PBO:0062120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 48 pseudogene","termid":"PBO:0062120"}


id: MONDO:0021935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease involving the Aspergillus niger.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspergillosis","termid":"MONDO:0005657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspergillus niger infection","secondary_identifiers":["MESH:C535390","UMLS:C0276657","MEDGEN:82916","GARD:9716"],"synonyms":[{"name":"Aspergillus niger infection","type":"exact"},{"name":"Aspergillus niger infection, pulmonary","type":"related"},{"name":"infections, Aspergillus niger","type":"related"}],"termid":"MONDO:0021935","xrefs":{"Monarch":{"xref_id":"0021935"}}}


id: MONDO:0003301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cutaneous leiomyoma arising from the dartos muscle of the scrotum or labia majora.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign reproductive system neoplasm","termid":"MONDO:0000383"},{"relation_name":"is_a","term_name":"leiomyoma cutis","termid":"MONDO:0003291"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dartoic leiomyoma","secondary_identifiers":["DOID:5147","ICD9:215.9","MEDGEN:91078","SCTID:254770007","NCIT:C4483","UMLS:C0346066"],"synonyms":[{"name":"dartoic leiomyoma","type":"exact"},{"name":"dartoic myoma","type":"exact"},{"name":"dartos muscle leiomyoma","type":"exact"},{"name":"leiomyoma of dartos muscle","type":"exact"}],"termid":"MONDO:0003301","xrefs":{"Monarch":{"xref_id":"0003301"}}}


id: MONDO:0025003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of the domestic or wild goat of the genus Capra.","definition_xrefs":["MESH:D015511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goat disease","synonyms":[{"name":"caprine disease","type":"related"},{"name":"caprine diseases","type":"related"},{"name":"disease, caprine","type":"related"},{"name":"disease, goat","type":"related"},{"name":"diseases, caprine","type":"related"},{"name":"diseases, goat","type":"related"},{"name":"goat disease","type":"exact"}],"termid":"MONDO:0025003","xrefs":{"Monarch":{"xref_id":"0025003"}}}


id: PBO:0040053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 1","termid":"PBO:0040053"}


id: PBO:0051729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 2","termid":"PBO:0051729"}


id: PBO:0067942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 244","termid":"PBO:0067942"}


id: GO:0120217
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bacterial type IIA topoisomerase that is unique in its function of introducing negative supercoils into DNA at the expense of ATP hydrolysis and is also capable of relaxing positive supercoils, an activity shared with topoisomerase IV. Typically, it is composed of two copies each of an A subunit (GyrA) and a B subunit (GyrB).","definition_xrefs":["PMID:1657531","GOC:krc","GOC:bhm","Wikipedia:DNA_gyrase","PMID:20675723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex","termid":"GO:0009330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA gyrase complex","synonyms":[{"name":"topoisomerase II complex","type":"exact"}],"termid":"GO:0120217"}


id: PBO:0089279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1","termid":"PBO:0089279"}


id: PBO:0060738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 3","termid":"PBO:0060738"}


id: PBO:0113554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase, poorly characterised, conflicting annotations between species, implicated in ribosome or centrosome associated processes and gene expression","termid":"PBO:0113554"}


id: PBO:0045265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNL-type zinc finger","termid":"PBO:0045265"}


id: GO:0005580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane attack complex protein alphaM chain (obsolete GO:0005580)","synonyms":[{"name":"membrane attack complex protein alphaM chain","type":"exact"}],"termid":"GO:0005580"}


id: PBO:0068083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 389","termid":"PBO:0068083"}


id: PBO:0064832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 10","termid":"PBO:0064832"}


id: PBO:0049244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GrpE like 1, mitochondrial","termid":"PBO:0049244"}


id: GO:0140967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mangnanese ions from outside of a cell into a cell.","definition_xrefs":["PMID:22773749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transport","termid":"GO:0071421"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"manganese import into cell","synonyms":[{"name":"manganese influx","type":"broad"}],"termid":"GO:0140967"}


id: PBO:0061991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily C member 1","termid":"PBO:0061991"}


id: FYPO:0005022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, localization of a protein to the actomyosin contractile ring is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased rate of protein localization to actomyosin contractile ring","synonyms":[{"name":"decreased rate of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"decreased rate of protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"decreased rate of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"decreased rate of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"decreased rate of protein localization to mitotic contractile ring","type":"exact"},{"name":"decreased rate of protein recruitment to actomyosin contractile ring","type":"related"},{"name":"reduced rate of protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0005022"}


id: PBO:0011525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis","termid":"PBO:0011525"}


id: GO:0043090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amino acids into a cell or organelle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"amino acid import","synonyms":[{"name":"amino acid uptake","type":"exact"}],"termid":"GO:0043090"}


id: GO:0033394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-alanine via the intermediate 1,3 diaminopropane.","definition_xrefs":["GOC:mah","MetaCyc:PWY-3981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-alanine biosynthetic process","termid":"GO:0019483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"beta-alanine biosynthetic process via 1,3 diaminopropane","synonyms":[{"name":"beta-alanine anabolism via 1,3 diaminopropane","type":"exact"},{"name":"beta-alanine biosynthesis via 1,3 diaminopropane","type":"exact"},{"name":"beta-alanine formation via 1,3 diaminopropane","type":"exact"},{"name":"beta-alanine synthesis via 1,3 diaminopropane","type":"exact"}],"termid":"GO:0033394"}


id: PBO:0017836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc4","termid":"PBO:0017836"}


id: FYPO:0005248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tellurite (TeO3(2-)) ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to tellurite","synonyms":[{"name":"resistance to tellurite during mitotic cell cycle","type":"related"},{"name":"resistance to tellurite during vegetative growth","type":"exact"},{"name":"resistance to tellurite ions","type":"exact"},{"name":"resistant to tellurite","type":"exact"}],"termid":"FYPO:0005248"}


id: GO:0070763
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of homodimer of the Notch ligand Delta1.","definition_xrefs":["PMID:12794186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"Delta1 complex","synonyms":[{"name":"Delta1 homodimer complex","type":"exact"}],"termid":"GO:0070763"}


id: PBO:0080736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWP1 antisense RNA 1","termid":"PBO:0080736"}


id: FYPO:0001795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing purvalanol A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on purvalanol A","synonyms":[{"name":"normal cell population growth in presence of purvalanol A","type":"exact"},{"name":"normal cell population growth on purvalanol A","type":"exact"},{"name":"normal cellular response to purvalanol A","type":"related"},{"name":"normal vegetative cell population growth on purvalanol A","type":"exact"}],"termid":"FYPO:0001795"}


id: FYPO:0005899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is normal (i.e. indistinguishable from wild type). Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["PMID:19570908","PomBase:mah","GO:0030048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of actin filament-based movement","synonyms":[{"name":"normal rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"normal rate of actin filament-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005899"}


id: MONDO:0043257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus foliaceus","termid":"MONDO:0019324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pemphigus and fogo selvagem","secondary_identifiers":["HGNC:3048","Orphanet:636955","MESH:C535551","GARD:7353","MEDGEN:120470","SCTID:46459009","UMLS:C0263314"],"synonyms":[{"name":"Brazilian pemphigus","type":"related"},{"name":"Brazilian pemphigus foliaceus","type":"exact"},{"name":"FS","type":"related"},{"name":"South American pemphigus","type":"related"},{"name":"amendola's syndrome","type":"related"},{"name":"endemic pemphigus foliaceus","type":"related"},{"name":"fogo selvagem","type":"related"},{"name":"wild fire","type":"related"},{"name":"wildfire pemphigus","type":"related"}],"termid":"MONDO:0043257","xrefs":{"Monarch":{"xref_id":"0043257"}}}


id: PBO:0051179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-69-1 (pseudogene)","termid":"PBO:0051179"}


id: PBO:0030024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shmoo_formation_in_absence_of_opposite_mating_type","termid":"PBO:0030024"}


id: FYPO:0005718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein kinase activity during mitosis","synonyms":[{"name":"decreased protein kinase activity during mitotic M phase","type":"related"},{"name":"decreased protein kinase activity during mitotic M-phase","type":"related"},{"name":"reduced protein kinase activity during mitosis","type":"exact"}],"termid":"FYPO:0005718"}


id: PR:Q10323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphoceramide mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.11c","synonyms":[{"name":"IPC mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-imt3","type":"exact"}],"termid":"PR:Q10323"}


id: GO:0042804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with identical proteins to form a homooligomer.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein homooligomerization activity (obsolete GO:0042804)","synonyms":[{"name":"oligomerization activity","type":"broad"},{"name":"protein homooligomerization activity","type":"exact"}],"termid":"GO:0042804"}


id: GO:0034751
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as an aryl hydrocarbon (Ah) receptor. Cytosolic and nuclear Ah receptor complexes have different subunit composition, but both contain the ligand-binding subunit AhR.","definition_xrefs":["PMID:7598497","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"aryl hydrocarbon receptor complex","synonyms":[{"name":"AHRC","type":"exact"},{"name":"AhR complex","type":"exact"}],"termid":"GO:0034751"}


id: PBO:0041638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 E","termid":"PBO:0041638"}


id: GO:0035319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of a prehair in the approximately 10 hour period following its emergence from an epidermal cell in an imaginal disc-derived wing. Prehair elongation is guided and/or driven by the polymerization of actin filaments and the orderly crosslinking of filaments into bundles.","definition_xrefs":["PMID:11832234","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing hair elongation","synonyms":[{"name":"wing hair elongation","type":"exact"},{"name":"wing prehair extension","type":"related"}],"termid":"GO:0035319"}


id: PBO:0063293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 7","termid":"PBO:0063293"}


id: PBO:0089163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial (2Fe-2S) cluster assembly chaperone Ssc1","termid":"PBO:0089163"}


id: GO:0070583
data:
  {"annotated_genes":["SJAG_00663","SJAG_04470","SJAG_03688","SJAG_02248","SJAG_01769","SJAG_04010"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96360,101718,101719,102006,107939,117953],"is_not":false,"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process in which a bending force is generated in the prospore membrane to form the characteristic curved shape of the prospore.","definition_xrefs":["GOC:dgf","PMID:18756268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore-type prospore membrane formation","termid":"GO:0032120"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01769":null,"SJAG_02248":null,"SJAG_03688":null,"SJAG_04010":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0061024","GO:0030437","GO:0007049"],"is_obsolete":false,"name":"spore membrane bending pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FSM bending","type":"exact"},{"name":"ascospore-type prospore membrane bending","type":"exact"},{"name":"forespore membrane bending","type":"exact"}],"termid":"GO:0070583","terms_by_termid":{"GO:0070583":null}}


id: MONDO:0001160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of psychiatric disorders which are characterized by a disruption in the usually integrated functions of consciousness, memory, identity, and/or perception of the environment.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissociative disorder","secondary_identifiers":["UMLS:C0012746","DOID:10935","ICD9:300.15","MEDGEN:3871","ICD9:300.9","MESH:D004213","NCIT:C92197"],"synonyms":[{"name":"dissociative disease","type":"exact"},{"name":"dissociative reaction","type":"exact"}],"termid":"MONDO:0001160","xrefs":{"Monarch":{"xref_id":"0001160"}}}


id: MONDO:0018314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare monogenic disease with infantile-onset pharmacoresistant focal seizures of mesial temporal lobe onset manifesting with unresponsiveness, hypertonia and automatisms and cognitive regression soon after seizure onset leading to severe intellectual disability with behavioral abnormalities.","definition_xrefs":["Orphanet:391316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"infantile-onset mesial temporal lobe epilepsy with severe cognitive regression","secondary_identifiers":["MEDGEN:1654958","UMLS:C4750853","GARD:21619"],"termid":"MONDO:0018314","xrefs":{"Monarch":{"xref_id":"0018314"}}}


id: MONDO:0957788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 18a, autosomal dominant","secondary_identifiers":["MEDGEN:1844217","UMLS:C5882694","OMIM:620512"],"termid":"MONDO:0957788","xrefs":{"Monarch":{"xref_id":"0957788"}}}


id: GO:0031559
data:
  {"annotated_genes":["SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000250"}]},"cv_name":"molecular_function","definition":"Catalysis of the cyclization of (S)-2,3-epoxysqualene to form a triterpene.","definition_xrefs":["GOC:ct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidosqualene cyclase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"2,3-oxidosqualene cyclase activity","type":"exact"}],"termid":"GO:0031559","terms_by_termid":{"GO:0000250":null}}


id: _global:interaction_relation_helper_property
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"helper_property_(not_for_use_in_curation)","termid":"_global:helper_property_(not_for_use_in_curation)"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_relation_helper_property","secondary_identifiers":["RO:0002563"],"termid":"_global:interaction_relation_helper_property"}


id: PBO:0030514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_paraquat","termid":"PBO:0030514"}


id: MONDO:0100604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary disease that encompasses the spectrum of clinical phenotypes resulting from loss of function of the TOR1AIP1 gene, including TOR1AIP1-related myopathy and TOR1AIP1-related multisystem disorder. Variability in the specific clinical features resulting from variants disrupting the function the TOR1AIP1 gene is thought to depend on the differential effects of variants on TOR1AIP1 transcript isoforms, for which there is evidence for tissue-specific expression and function.","definition_xrefs":["PMID:37108075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOR1AIP1-related nuclear envelopathy","termid":"MONDO:0100604","xrefs":{"Monarch":{"xref_id":"0100604"}}}


id: PBO:0027761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_endocytosis_during_meiotic_cell_cycle","termid":"PBO:0027761"}


id: GO:0022882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + beta-glucoside(out) = protein histidine + beta-glucoside phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"beta-glucoside transmembrane transporter activity","termid":"GO:0015573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-beta-glucoside phosphotransferase system transporter activity","synonyms":[{"name":"beta-glucoside PTS transporter activity","type":"exact"}],"termid":"GO:0022882"}


id: PATO:0000770
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination quality of inhering in a bearer by virtue of the bearer's lacking skillful and effective interaction of movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coordination","termid":"PATO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncoordinated","termid":"PATO:0000770"}


id: PBO:0038429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 1,4-galactosyltransferase (P blood group)","termid":"PBO:0038429"}


id: PBO:0068717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 6, pseudogene","termid":"PBO:0068717"}


id: SO:0001882
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where a deletion fuses genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_fusion","synonyms":[{"name":"feature fusion","type":"exact"}],"termid":"SO:0001882"}


id: GO:0034267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"discadenine metabolic process","synonyms":[{"name":"discadenine metabolism","type":"exact"}],"termid":"GO:0034267"}


id: PBO:0003354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 associated cyclin","termid":"PBO:0003354"}


id: GO:0039674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or a viral particle out of the host cell nucleus.","definition_xrefs":["VZ:2177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"is_a","term_name":"exit from host cell","termid":"GO:0035891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus","termid":"GO:0039674"}


id: MONDO:0037255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant epithelial tumor of the ovary characterized by the presence of neoplastic epithelial cells that, in well differentiated tumors, resemble the epithelial cells of the fallopian tube and, in poorly differentiated tumors, show anaplastic features. Approximately thirty to fifty percent of the tumors are bilateral. Grossly, the better differentiated tumors consist of cystic masses, usually unilocular, containing a clear but sometimes viscous fluid. Papillary formations are often present. The more malignant tumors tend to be solid and invasive, with areas of necrosis and hemorrhage.","definition_xrefs":["NCIT:C8431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"},{"relation_name":"is_a","term_name":"serous neoplasm","termid":"MONDO:0037256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian serous tumor","secondary_identifiers":["UMLS:C0476122","MEDGEN:141653"],"synonyms":[{"name":"ovarian serous neoplasm","type":"exact"},{"name":"ovarian serous tumor","type":"exact"},{"name":"serous neoplasm of ovary","type":"exact"},{"name":"serous neoplasm of the ovary","type":"exact"},{"name":"serous tumor of ovary","type":"exact"},{"name":"serous tumor of the ovary","type":"exact"},{"name":"serous tumour of ovary","type":"exact"},{"name":"serous tumour of the ovary","type":"exact"}],"termid":"MONDO:0037255","xrefs":{"Monarch":{"xref_id":"0037255"}}}


id: GO:0010976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"positively_regulates","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron projection development","synonyms":[{"name":"positive regulation of neurite biosynthesis","type":"narrow"},{"name":"positive regulation of neurite development","type":"narrow"},{"name":"positive regulation of neurite formation","type":"narrow"},{"name":"positive regulation of neurite growth","type":"narrow"}],"termid":"GO:0010976"}


id: MONDO:0013985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the OTOG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 18B","secondary_identifiers":["MEDGEN:767077","DOID:0110474","OMIM:614945","UMLS:C3554163","GARD:22648"],"synonyms":[{"name":"DFNB18B","type":"narrow"},{"name":"OTOG autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 18B","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 18B","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in OTOG","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 18B","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 18B","type":"exact"},{"name":"deafness, autosomal recessive 18B","type":"narrow"},{"name":"deafness, autosomal recessive 18b","type":"narrow"},{"name":"deafness, autosomal recessive type 18B","type":"narrow"}],"termid":"MONDO:0013985","xrefs":{"Monarch":{"xref_id":"0013985"}}}


id: GO:0022886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables transport of a solute across a membrane. This kind of transporter interacts much more weakly with the solute than the carrier does. It is an aqueous pore that extends across the membrane. It may change from closed to open and back. It transports faster than a carrier. It is always passive.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"channel-forming ionophore activity","synonyms":[{"name":"ionophore activity","type":"broad"}],"termid":"GO:0022886"}


id: MONDO:0012383
data:
  {"annotated_genes":["SJAG_04210"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88434],"is_not":false,"summary":null,"term":"MONDO:0012383"}]},"cv_name":"mondo","definition":"The primary immunodeficiency with natural-killer cell deficiency and adrenal insufficiency is characterized by a specific natural-killer (NK) cell deficiency and susceptibility to viral diseases. It has been described in four children from a large inbred kindred. Three out of the four children reported developed a viral illness. The mode of transmission is most likely autosomal recessive. The causative gene has been localized to within a 12-Mb region on chromosome 8p11.23-q11.21.","definition_xrefs":["Orphanet:75391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary immunodeficiency with natural-killer cell deficiency and adrenal insufficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C123729","DOID:0111967","NANDO:2200771","GARD:16695","SCTID:724275005","MESH:C566492","MEDGEN:351256","UMLS:C1864947","OMIM:609981"],"synonyms":[{"name":"IMD54","type":"related"},{"name":"NKGCD","type":"related"},{"name":"immunodeficiency 54","type":"related"},{"name":"mini-chromosome maintenance 4","type":"exact"},{"name":"natural KILLER cell and glucocorticoid deficiency with DNA repair defect","type":"related"},{"name":"natural Killer cell deficiency, familial isolated","type":"related"},{"name":"primary immunodeficiency due to MCM4 deficiency","type":"exact"}],"termid":"MONDO:0012383","terms_by_termid":{"MONDO:0012383":null},"xrefs":{"Monarch":{"xref_id":"0012383"}}}


id: FYPO:0005603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint","termid":"FYPO:0002341"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","termid":"FYPO:0005268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"delayed mitotic DNA damage checkpoint deactivation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"prolonged mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005603"}


id: GO:0071222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipopolysaccharide","termid":"GO:0032496"},{"relation_name":"is_a","term_name":"cellular response to molecule of bacterial origin","termid":"GO:0071219"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipopolysaccharide","synonyms":[{"name":"cellular response to LPS","type":"exact"},{"name":"cellular response to endotoxin","type":"broad"}],"termid":"GO:0071222"}


id: MONDO:0010975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arrhythmogenic right ventricular dysplasia 2 (obsolete MONDO:0010975)","termid":"MONDO:0010975","xrefs":{"Monarch":{"xref_id":"0010975"}}}


id: PBO:0061744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin 3","termid":"PBO:0061744"}


id: PBO:0030640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_following_anaerobic_growth","termid":"PBO:0030640"}


id: PBO:0090684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, WW domain -binding Rbm42","termid":"PBO:0090684"}


id: PBO:0053156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase D","termid":"PBO:0053156"}


id: PBO:0041151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 6","termid":"PBO:0041151"}


id: GO:0005534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to aldohexose galactose (galacto-hexose), a common constituent of many oligo- and polysaccharides.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"galactose binding","synonyms":[{"name":"galactose binding lectin","type":"related"}],"termid":"GO:0005534"}


id: PBO:0028036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_astral_microtubule_anchoring_at_mitotic_spindle_pole_body","termid":"PBO:0028036"}


id: FYPO:0002642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to amphotericin B. Cells stop growing (and may die) at a concentration of amphotericin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to amphotericin B","synonyms":[{"name":"hypersensitive to amphotericin B","type":"exact"},{"name":"sensitive to amphotericin B during mitotic cell cycle","type":"related"},{"name":"sensitive to amphotericin B during vegetative growth","type":"exact"}],"termid":"FYPO:0002642"}


id: PBO:0002511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Rho2","termid":"PBO:0002511"}


id: PBO:0042040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 92","termid":"PBO:0042040"}


id: PBO:0017921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FAD transmembrane transporter (predicted)","termid":"PBO:0017921"}


id: MONDO:0010642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Lesch-Nyhan syndrome","termid":"MONDO:0010298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"Lesch-Nyhan phenotype with normal HGPRT","secondary_identifiers":["UMLS:C1839883","MEDGEN:374332","OMIM:308950"],"synonyms":[{"name":"Lesch-Nyhan phenotype with normal HGPRT","type":"exact"}],"termid":"MONDO:0010642","xrefs":{"Monarch":{"xref_id":"0010642"}}}


id: GO:0045190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin genes involved in immune response","termid":"GO:0002204"},{"relation_name":"is_a","term_name":"B cell activation involved in immune response","termid":"GO:0002312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259","GO:0010467"],"is_obsolete":false,"name":"isotype switching","secondary_identifiers":["Wikipedia:Immunoglobulin_class_switching"],"synonyms":[{"name":"class switch recombination","type":"exact"},{"name":"class switching","type":"exact"},{"name":"isotype switch recombination","type":"exact"}],"termid":"GO:0045190"}


id: GO:0103089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(6'-methylthio)hexylmalate = 3-(6'-methylthio)hexylmalate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiohexylmalate isomerase activity (obsolete GO:0103089)","termid":"GO:0103089"}


id: MONDO:0004641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"},{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin carcinoma in situ","secondary_identifiers":["DOID:8687","ICD9:232.2","ICD9:232.4","ICD10CM:D04","ICD9:232.0","ICD9:232.7","ICD9:232.5","ICD9:232.9","NCIT:C3640","UMLS:C0154073","ICD9:232.6","ICD9:232.8","ICD9:232","SCTID:92749008","ICD9:232.3","MEDGEN:102308"],"synonyms":[{"name":"carcinoma in situ of skin","type":"exact"},{"name":"carcinoma in situ of the skin","type":"exact"},{"name":"carcinoma in situ of zone of skin","type":"exact"},{"name":"carcinoma of skin stage 0","type":"exact"},{"name":"carcinoma of the skin stage 0","type":"exact"},{"name":"cutaneous carcinoma in situ","type":"exact"},{"name":"nonmelanoma carcinoma in situ","type":"exact"},{"name":"skin cancer stage 0","type":"exact"},{"name":"skin carcinoma in situ","type":"exact"},{"name":"skin carcinoma stage 0","type":"exact"},{"name":"stage 0 nonmelanoma skin carcinoma in situ","type":"exact"},{"name":"stage 0 skin cancer","type":"exact"},{"name":"stage 0 skin cancer aJCC v6","type":"exact"},{"name":"stage 0 skin cancer aJCC v7","type":"exact"},{"name":"stage 0 skin carcinoma","type":"exact"},{"name":"stage 0 zone of skin carcinoma","type":"exact"},{"name":"zone of skin carcinoma in situ","type":"exact"},{"name":"zone of skin in situ carcinoma","type":"exact"}],"termid":"MONDO:0004641","xrefs":{"Monarch":{"xref_id":"0004641"}}}


id: PBO:0065815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4A, member RAS oncogene family","termid":"PBO:0065815"}


id: PBO:0081244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 14","termid":"PBO:0081244"}


id: PBO:0047737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FNDC1 intronic transcript 1","termid":"PBO:0047737"}


id: PBO:0081223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 3","termid":"PBO:0081223"}


id: MONDO:0002556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The rarest histopathologic subtype of Schwannoma. The reported cases have been located in the gastrointestinal submucosa or subcutaneous tissue. Morphologically it is characterized by the presence of a microcyst-rich network of spindle cells with minimal amount of cytoplasm and Antoni A tissue.","definition_xrefs":["NCIT:C5321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcystic/reticular schwannoma","secondary_identifiers":["MEDGEN:882329","UMLS:C4054526"],"synonyms":[{"name":"microcystic/reticular schwannoma","type":"exact"}],"termid":"MONDO:0002556","xrefs":{"Monarch":{"xref_id":"0002556"}}}


id: PBO:0064277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H3","termid":"PBO:0064277"}


id: GO:0001941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a postsynaptic membrane, the specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft).","definition_xrefs":["GOC:pr","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"postsynaptic membrane organization","synonyms":[{"name":"post-synaptic membrane organization","type":"exact"},{"name":"postsynaptic membrane organisation","type":"exact"}],"termid":"GO:0001941"}


id: PBO:0080431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 15","termid":"PBO:0080431"}


id: MONDO:0957252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 50","secondary_identifiers":["MEDGEN:1841109","OMIM:620356","UMLS:C5830473"],"termid":"MONDO:0957252","xrefs":{"Monarch":{"xref_id":"0957252"}}}


id: PR:G2TRS1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.20","synonyms":[{"name":"Spom972h-new14","type":"exact"}],"termid":"PR:G2TRS1"}


id: PBO:0045599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 10 (pseudogene)","termid":"PBO:0045599"}


id: FYPO:0002008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of aconitate hydratase (also known as aconitase) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal aconitate hydratase activity","termid":"FYPO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased aconitate hydratase activity","synonyms":[{"name":"decreased aconitase activity","type":"exact"},{"name":"reduced aconitate hydratase activity","type":"exact"}],"termid":"FYPO:0002008"}


id: PBO:0055240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2667","termid":"PBO:0055240"}


id: GO:0072655
data:
  {"annotated_genes":["SJAG_03416","SJAG_00196","SJAG_02917","SJAG_00373","SJAG_01684","SJAG_03502","SJAG_02398","SJAG_01405","SJAG_01951","SJAG_04218","SJAG_01780","SJAG_04641","SJAG_03515","SJAG_01615","SJAG_04014","SJAG_01647","SJAG_00404","SJAG_05302","SJAG_03633","SJAG_02355","SJAG_03648","SJAG_04208","SJAG_02524","SJAG_04996","SJAG_01949","SJAG_04336","SJAG_01597","SJAG_04432","SJAG_03358","SJAG_04533","SJAG_02797","SJAG_01640","SJAG_00569","SJAG_02397","SJAG_02034","SJAG_04072","SJAG_05300","SJAG_01560","SJAG_02361","SJAG_01442","SJAG_02016","SJAG_07010","SJAG_02077","SJAG_01120","SJAG_01004","SJAG_03415","SJAG_03560","SJAG_00564","SJAG_01879","SJAG_02809","SJAG_05259","SJAG_01917","SJAG_00687"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100364,96910,99005],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[79471,78846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045041"},{"annotations":[109444,96373,98757,109522,101120,104593,107108,92723,90144,118768,91364,108100,119240,113760,101420,111829,102205,101304,105183,117210,109498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030150"},{"annotations":[58384,77474,90472,109499,118250,109523,104825,75735,79554,115166,75189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[80331,58509,80392,80065,76236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[109500,59026,111999,71683,78374,113754,100105,100456,112352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"},{"annotations":[78602,82145,81760,104103,71575,79967],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[68612,100266,104358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to the mitochondrion or a part of the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mitochondrion","termid":"GO:0070585"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01004":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02016":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03633":null,"SJAG_03648":null,"SJAG_04014":null,"SJAG_04072":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"establishment of protein localisation to mitochondrion","type":"exact"},{"name":"establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:0072655","terms_by_termid":{"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0032979":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0160203":null}}


id: PBO:0058274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4651","termid":"PBO:0058274"}


id: FYPO:0006986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled up to, but not beyond, the IRL boundary element in the silent mating-type cassette, as in wild type.","definition_xrefs":["PomBase:mah","PMID:26518661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal spatial extent of heterochromatin assembly to boundary element IRL","synonyms":[{"name":"normal spatial extent of heterochromatin assembly to boundary element IRL at silent mating type locus","type":"exact"},{"name":"normal spatial extent of heterochromatin assembly to boundary element IRL during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of heterochromatin assembly to boundary element IRL during vegetative growth","type":"exact"}],"termid":"FYPO:0006986"}


id: GO:0051266
data:
  {"annotated_genes":["SJAG_01786"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99675],"is_not":false,"summary":null,"term":"GO:0051266"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: siroheme + 2 H+ = Fe(2+) + sirohydrochlorin.","definition_xrefs":["RHEA:24360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrochelatase activity","termid":"GO:0004325"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"sirohydrochlorin ferrochelatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02864","MetaCyc:SIROHEME-FERROCHELAT-RXN","EC:4.99.1.4"],"synonyms":[{"name":"siroheme ferro-lyase (sirohydrochlorin-forming)","type":"related"},{"name":"siroheme synthase activity","type":"broad"},{"name":"sirohydrochlorin ferro-lyase activity","type":"exact"}],"termid":"GO:0051266","terms_by_termid":{"GO:0051266":null}}


id: FYPO:0003496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which azetidine-2-carboxylic acid acetyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal azetidine-2-carboxylic acid acetyltransferase activity","termid":"FYPO:0003495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished azetidine-2-carboxylic acid acetyltransferase activity","synonyms":[{"name":"azetidine-2-carboxylic acid acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0003496"}


id: MONDO:0007416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic tubulointerstitial nephropathy that affects people in certain rural areas along the Danube river in the Balkans. It leads to end-stage renal disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial nephritis","termid":"MONDO:0001085"},{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Balkan nephropathy","secondary_identifiers":["DOID:3052","icd11.foundation:18497836","ICD10CM:N15.0","NCIT:C123025","MEDGEN:495","UMLS:C0004698","EFO:0007164","ICD9:583.89","MESH:D001449","OMIM:124100","SCTID:26121002"],"synonyms":[{"name":"AAN","type":"related"},{"name":"BEN","type":"related"},{"name":"Balkan endemic nephropathy","type":"exact"},{"name":"Chinese herb endemic nephropathy","type":"exact"},{"name":"DEFN","type":"related"},{"name":"Danubian endemic familial nephropathy","type":"exact"},{"name":"aristolochic acid nephropathy","type":"exact"},{"name":"endemic nephropathy","type":"exact"},{"name":"nephropathia epidemica","type":"related"}],"termid":"MONDO:0007416","xrefs":{"Monarch":{"xref_id":"0007416"}}}


id: GO:0034604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyruvate + CoA + NAD+ = acetyl-CoA + CO2 + NADH.","definition_xrefs":["GOC:mah","ISBN:0201090910"],"gene_count":0,"genotype_count":0,"name":"obsolete pyruvate dehydrogenase (NAD+) activity (obsolete GO:0034604)","termid":"GO:0034604"}


id: PBO:0074083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A53 pseudogene 1","termid":"PBO:0074083"}


id: GO:0015713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which phosphoglycerate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonate transmembrane transport","termid":"GO:0042873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phosphoglycerate transmembrane transport","synonyms":[{"name":"phosphoglycerate transport","type":"related"}],"termid":"GO:0015713"}


id: GO:0070339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipopeptide stimulus.","definition_xrefs":["PMID:12077222","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterial lipoprotein","termid":"GO:0032493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bacterial lipopeptide","termid":"GO:0070339"}


id: PBO:0078691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-4","termid":"PBO:0078691"}


id: PBO:0004859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn12","termid":"PBO:0004859"}


id: PBO:0062468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 159 pseudogene","termid":"PBO:0062468"}


id: PBO:0059328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S5","termid":"PBO:0059328"}


id: PBO:0033811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_S_phase_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0033811"}


id: GO:0009843
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thylakoid found in a cyanelle, which is a type of plastid found in certain algae. The cyanelle contains a photosynthetic membrane resembling that of cyanobacteria.","definition_xrefs":["GOC:mtg_sensu","GOC:lr","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid","termid":"GO:0031976"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle thylakoid","termid":"GO:0009843"}


id: MONDO:0020033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of digestive system neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare digestive tumor (obsolete MONDO:0020033)","secondary_identifiers":["Orphanet:98059"],"synonyms":[{"name":"rare digestive cancer","type":"exact"},{"name":"rare digestive neoplasm","type":"exact"},{"name":"rare digestive system neoplasm","type":"exact"}],"termid":"MONDO:0020033","xrefs":{"Monarch":{"xref_id":"0020033"}}}


id: PBO:0078321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 3","termid":"PBO:0078321"}


id: MONDO:0009134
data:
  {"annotated_genes":["SJAG_03153","SJAG_02539"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87272,87273],"is_not":false,"summary":null,"term":"MONDO:0009134"}]},"cv_name":"mondo","definition":"Congenital dyserythropoietic anemia type II (CDA II) is the most common form of CDA characterized by anemia, jaundice and splenomegaly and often leading to liver iron overload and gallstones.","definition_xrefs":["Orphanet:98873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anemia","termid":"MONDO:0000577"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"},{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia","termid":"MONDO:0019403"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02539":null,"SJAG_03153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005570","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"congenital dyserythropoietic anemia type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2001","DOID:0111401","UMLS:C1306589","ICD9:285.8","NANDO:1200887","OMIM:224100","SCTID:68870007","MEDGEN:266296"],"synonyms":[{"name":"CDA II","type":"exact"},{"name":"CDA type 2","type":"exact"},{"name":"CDA type II","type":"exact"},{"name":"CDAN2","type":"related"},{"name":"Cda 2","type":"related"},{"name":"SEC23B-CDG","type":"exact"},{"name":"anemia, congenital dyserythropoietic, type 2","type":"related"},{"name":"anemia, congenital dyserythropoietic, type II","type":"related"},{"name":"anemia, dyserythropoietic, congenital type 2","type":"related"},{"name":"congenital dyserythropoietic anemia type 2","type":"exact"},{"name":"dyserythropoietic Anemia, congenital, type 2","type":"related"},{"name":"dyserythropoietic Anemia, hempas type","type":"related"},{"name":"dyserythropoietic anemia, congenital, type II","type":"exact"},{"name":"hempas anaemia","type":"related"},{"name":"hempas anemia","type":"related"},{"name":"hereditary erythroblastic multinuclearity with Positive acidified-serum test","type":"related"},{"name":"hereditary erythroblastic multinuclearity with a positive acidified-serum test (hempas)","type":"exact"}],"termid":"MONDO:0009134","terms_by_termid":{"MONDO:0009134":null},"xrefs":{"Monarch":{"xref_id":"0009134"}}}


id: PBO:0065075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 divergent transcript","termid":"PBO:0065075"}


id: GO:0039634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The viral-killing of a host cell by a pre-existing virus in response to a subsequent infection of the host cell by second virus.","definition_xrefs":["GOC:bm","PMID:22398285","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated killing of host cell","termid":"GO:0001907"},{"relation_name":"is_a","term_name":"response to virus","termid":"GO:0009615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"killing by virus of host cell during superinfection exclusion","synonyms":[{"name":"Rex exclusion","type":"narrow"},{"name":"killing by virus of host cells during superinfection exclusion","type":"exact"},{"name":"killing by virus of host cells involved in superinfection exclusion","type":"exact"}],"termid":"GO:0039634"}


id: GO:0022411
data:
  {"annotated_genes":["SJAG_03380","SJAG_01888","SJAG_02601","SJAG_05296","SJAG_03646","SJAG_03345","SJAG_03444","SJAG_02624","SJAG_03658","SJAG_02560","SJAG_04038","SJAG_00188","SJAG_01696","SJAG_02812","SJAG_02189","SJAG_00642","SJAG_02096","SJAG_05000","SJAG_00680","SJAG_03232","SJAG_02700","SJAG_00667","SJAG_02314","SJAG_05025","SJAG_04578","SJAG_03052","SJAG_01252","SJAG_01171","SJAG_04862","SJAG_00597","SJAG_03301","SJAG_01993","SJAG_03428","SJAG_00338","SJAG_04841","SJAG_02414","SJAG_03126","SJAG_04312","SJAG_00206","SJAG_01894","SJAG_01224","SJAG_03106","SJAG_06309","SJAG_04283","SJAG_05221","SJAG_01297","SJAG_02699","SJAG_01518","SJAG_02746","SJAG_00279","SJAG_05265","SJAG_03949","SJAG_04909","SJAG_00308","SJAG_00840","SJAG_02336","SJAG_01017","SJAG_02433","SJAG_00723","SJAG_00286","SJAG_01497","SJAG_00898","SJAG_01653","SJAG_03025","SJAG_01774","SJAG_03189","SJAG_05001","SJAG_02718","SJAG_01074","SJAG_02100","SJAG_02704","SJAG_00330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71844,75127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[78023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[72260,73836,77378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097352"},{"annotations":[96481],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[81986,94165,77311,80929],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[116390],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[81526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"},{"annotations":[96665,98355,75600,111108,111109,60359,60773,118010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002184"},{"annotations":[104220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031025"},{"annotations":[62586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903259"},{"annotations":[103842,90091,95866,102036,103841,110007,113278,90916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"},{"annotations":[91444,120149,100495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[100524,97799,103966,97362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070126"},{"annotations":[112415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007077"},{"annotations":[105564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[77380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"},{"annotations":[76099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034496"},{"annotations":[118890,91888,98957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"},{"annotations":[69365,63010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[99498],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[103747],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031117"},{"annotations":[113928],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904595"},{"annotations":[70286,67807,78305],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045905"},{"annotations":[91557,102038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030994"},{"annotations":[105567,95682],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905557"},{"annotations":[75778],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006449"},{"annotations":[105033,107557,65347,78392,77121,71578,118071,79976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"},{"annotations":[76302,72543,106619,105514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032790"},{"annotations":[78244,57516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035494"},{"annotations":[57277,89587,64563,76657,80449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000390"},{"annotations":[79209,62687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006415"}]},"cv_name":"biological_process","definition":"A cellular process that results in the breakdown of a cellular component.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component 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component disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0071845"],"synonyms":[{"name":"cell structure disassembly","type":"exact"},{"name":"cellular component disassembly at cellular level","type":"exact"}],"termid":"GO:0022411","terms_by_termid":{"GO:0000390":null,"GO:0002184":null,"GO:0006337":null,"GO:0006415":null,"GO:0006449":null,"GO:0007019":null,"GO:0007077":null,"GO:0016240":null,"GO:0030042":null,"GO:0030994":null,"GO:0031025":null,"GO:0031117":null,"GO:0032790":null,"GO:0034496":null,"GO:0035494":null,"GO:0045905":null,"GO:0051016":null,"GO:0051228":null,"GO:0060172":null,"GO:0070126":null,"GO:0070462":null,"GO:0072318":null,"GO:0072344":null,"GO:0097352":null,"GO:0140516":null,"GO:0140708":null,"GO:1901098":null,"GO:1903259":null,"GO:1904541":null,"GO:1904595":null,"GO:1905557":null}}


id: GO:2000611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thyroid hormone generation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of thyroid hormone generation","termid":"GO:2000609"},{"relation_name":"positively_regulates","term_name":"thyroid hormone generation","termid":"GO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thyroid hormone generation","termid":"GO:2000611"}


id: GO:0016321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle in a female.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"},{"relation_name":"part_of","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"female meiosis chromosome segregation","termid":"GO:0016321"}


id: GO:0047371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetate + butanoyl-CoA = acetoacetyl-CoA + butanoate.","definition_xrefs":["EC:2.8.3.9","RHEA:12961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"butyrate-acetoacetate CoA-transferase activity","secondary_identifiers":["MetaCyc:2.8.3.9-RXN","KEGG_REACTION:R01365"],"synonyms":[{"name":"butanoyl-CoA:acetoacetate CoA-transferase activity","type":"related"},{"name":"butyryl coenzyme A-acetoacetate coenzyme A-transferase activity","type":"related"},{"name":"butyryl-CoA-acetoacetate CoA-transferase activity","type":"related"}],"termid":"GO:0047371"}


id: GO:0061574
data:
  {"annotated_genes":["SJAG_00888","SJAG_05926"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77514,116334],"is_not":false,"summary":null,"term":"GO:0061574"}]},"cv_name":"cellular_component","definition":"A protein complex involved in regulation of mRNA processing and apoptosis. It binds to RNA in a sequence-independent manner and is recruited to the EJC prior to or during the splicing process. In humans the core proteins are RNPS1, SAP18 and ACIN1.","definition_xrefs":["PMID:12665594","GOC:dph","PMID:22388736","PMID:16314458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_05926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ASAP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061574","terms_by_termid":{"GO:0061574":null}}


id: FYPO:0002667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002665"},{"relation_name":"is_a","term_name":"decreased peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased peptide-serine-N-acetyltransferase activity","synonyms":[{"name":"reduced peptide-serine-N-acetyltransferase activity","type":"exact"}],"termid":"FYPO:0002667"}


id: MONDO:0017119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with microcephaly as major feature (obsolete MONDO:0017119)","secondary_identifiers":["icd11.foundation:2011102370","Orphanet:269528"],"termid":"MONDO:0017119","xrefs":{"Monarch":{"xref_id":"0017119"}}}


id: PATO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved backward or downward.","direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrorse","termid":"PATO:0002237"}


id: GO:0036342
data:
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id: PBO:0065565
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 5","termid":"PBO:0065565"}


id: GO:0000445
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id: MOD:00932
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id: PBO:0049177
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id: PBO:0002196
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id: PBO:0055162
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id: MONDO:0015706
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id: PBO:0075621
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id: GO:0061871
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id: GO:0009032
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id: MONDO:0018998
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id: GO:0071454
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id: PBO:0004715
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id: PBO:0075100
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id: GO:0043274
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id: PR:O14126
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id: MONDO:0005172
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in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein 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